Cow genome map


           Conread name:
           unkn-SGD602702291.R1
        

               Conread position:
               1-170
               

               Cow position:
               
               

               Alignm length:
               171
               

               Alignm identity:
               136
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               38, 31
               

               Conread position:
               1-215
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               174
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               38, 25
               

               Conread position:
               1-215
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               167
               

               Alignm E-value:
               7.00649e-44
               

               Alignm gaps (pig, cow):
               37, 32
               

               Conread position:
               1-218
               

               Cow position:
               
               

               Alignm length:
               222
               

               Alignm identity:
               164
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               38, 32
               

               Conread position:
               1-225
               

               Cow position:
               
               

               Alignm length:
               227
               

               Alignm identity:
               177
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               56, 32
               

               Conread position:
               1-243
               

               Cow position:
               
               

               Alignm length:
               245
               

               Alignm identity:
               189
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               38, 32
               

               Conread position:
               2-195
               

               Cow position:
               
               

               Alignm length:
               195
               

               Alignm identity:
               156
               

               Alignm E-value:
               7.00649e-44
               

               Alignm gaps (pig, cow):
               37, 31
               

               Conread position:
               2-214
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               175
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 33
               

               Conread position:
               2-215
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               173
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 31
               

               Conread position:
               2-215
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               173
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 31
               

               Conread position:
               2-216
               

               Cow position:
               
               

               Alignm length:
               228
               

               Alignm identity:
               169
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               37, 9
               

               Conread position:
               2-236
               

               Cow position:
               
               

               Alignm length:
               238
               

               Alignm identity:
               177
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               9, 14
               

               Conread position:
               3-150
               

               Cow position:
               
               

               Alignm length:
               149
               

               Alignm identity:
               121
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               36, 30
               

               Conread position:
               3-151
               

               Cow position:
               
               

               Alignm length:
               151
               

               Alignm identity:
               124
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               36, 30
               

               Conread position:
               3-160
               

               Cow position:
               
               

               Alignm length:
               159
               

               Alignm identity:
               133
               

               Alignm E-value:
               5e-40
               

               Alignm gaps (pig, cow):
               36, 30
               

               Conread position:
               3-162
               

               Cow position:
               
               

               Alignm length:
               161
               

               Alignm identity:
               134
               

               Alignm E-value:
               5e-40
               

               Alignm gaps (pig, cow):
               36, 30
               

               Conread position:
               3-168
               

               Cow position:
               
               

               Alignm length:
               166
               

               Alignm identity:
               132
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               3-170
               

               Cow position:
               
               

               Alignm length:
               169
               

               Alignm identity:
               142
               

               Alignm E-value:
               7.00649e-44
               

               Alignm gaps (pig, cow):
               44, 30
               

               Conread position:
               3-183
               

               Cow position:
               
               

               Alignm length:
               182
               

               Alignm identity:
               142
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               36, 30
               

               Conread position:
               3-198
               

               Cow position:
               
               

               Alignm length:
               196
               

               Alignm identity:
               161
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               3-213
               

               Cow position:
               
               

               Alignm length:
               212
               

               Alignm identity:
               160
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               36, 32
               

               Conread position:
               3-213
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               165
               

               Alignm E-value:
               6.00036e-42
               

               Alignm gaps (pig, cow):
               36, 30
               

               Conread position:
               3-214
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               170
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 30
               

               Conread position:
               3-214
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               166
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               36, 30
               

               Conread position:
               3-215
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               171
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 30
               

               Conread position:
               3-215
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               173
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 12
               

               Conread position:
               3-215
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               171
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 30
               

               Conread position:
               3-215
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               155
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               141, 0
               

               Conread position:
               3-215
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               168
               

               Alignm E-value:
               5.99756e-43
               

               Alignm gaps (pig, cow):
               36, 29
               

               Conread position:
               3-215
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               167
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               36, 30
               

               Conread position:
               3-215
               

               Cow position:
               
               

               Alignm length:
               222
               

               Alignm identity:
               175
               

               Alignm E-value:
               8.40779e-45
               

               Alignm gaps (pig, cow):
               36, 30
               

               Conread position:
               3-215
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               170
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 30
               

               Conread position:
               3-216
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               171
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 30
               

               Conread position:
               3-216
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               170
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 30
               

               Conread position:
               3-218
               

               Cow position:
               
               

               Alignm length:
               217
               

               Alignm identity:
               167
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               36, 30
               

               Conread position:
               3-227
               

               Cow position:
               
               

               Alignm length:
               236
               

               Alignm identity:
               181
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               36, 30
               

               Conread position:
               4-159
               

               Cow position:
               
               

               Alignm length:
               157
               

               Alignm identity:
               123
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               35, 16
               

               Conread position:
               4-214
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               163
               

               Alignm E-value:
               6.00036e-42
               

               Alignm gaps (pig, cow):
               35, 29
               

               Conread position:
               4-215
               

               Cow position:
               
               

               Alignm length:
               212
               

               Alignm identity:
               168
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               173, 0
               

               Conread position:
               4-216
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               173
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               35, 28
               

               Conread position:
               5-134
               

               Cow position:
               
               

               Alignm length:
               130
               

               Alignm identity:
               104
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               5-194
               

               Cow position:
               
               

               Alignm length:
               190
               

               Alignm identity:
               149
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               5-203
               

               Cow position:
               
               

               Alignm length:
               200
               

               Alignm identity:
               163
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 28
               

               Conread position:
               5-215
               

               Cow position:
               
               

               Alignm length:
               212
               

               Alignm identity:
               172
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 28
               

               Conread position:
               6-102
               

               Cow position:
               
               

               Alignm length:
               97
               

               Alignm identity:
               81
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               6-121
               

               Cow position:
               
               

               Alignm length:
               117
               

               Alignm identity:
               96
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               33, 27
               

               Conread position:
               6-131
               

               Cow position:
               
               

               Alignm length:
               127
               

               Alignm identity:
               107
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               33, 27
               

               Conread position:
               6-152
               

               Cow position:
               
               

               Alignm length:
               148
               

               Alignm identity:
               121
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               33, 27
               

               Conread position:
               6-155
               

               Cow position:
               
               

               Alignm length:
               151
               

               Alignm identity:
               127
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               32, 27
               

               Conread position:
               6-210
               

               Cow position:
               
               

               Alignm length:
               206
               

               Alignm identity:
               172
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 27
               

               Conread position:
               6-213
               

               Cow position:
               
               

               Alignm length:
               210
               

               Alignm identity:
               164
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               33, 27
               

               Conread position:
               6-213
               

               Cow position:
               
               

               Alignm length:
               208
               

               Alignm identity:
               162
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               6-214
               

               Cow position:
               
               

               Alignm length:
               211
               

               Alignm identity:
               171
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 27
               

               Conread position:
               6-215
               

               Cow position:
               
               

               Alignm length:
               211
               

               Alignm identity:
               170
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 27
               

               Conread position:
               6-215
               

               Cow position:
               
               

               Alignm length:
               211
               

               Alignm identity:
               171
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 27
               

               Conread position:
               6-215
               

               Cow position:
               
               

               Alignm length:
               212
               

               Alignm identity:
               167
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 28
               

               Conread position:
               6-216
               

               Cow position:
               
               

               Alignm length:
               211
               

               Alignm identity:
               172
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               58, 0
               

               Conread position:
               6-217
               

               Cow position:
               
               

               Alignm length:
               217
               

               Alignm identity:
               175
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 27
               

               Conread position:
               6-220
               

               Cow position:
               
               

               Alignm length:
               217
               

               Alignm identity:
               175
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 28
               

               Conread position:
               6-222
               

               Cow position:
               
               

               Alignm length:
               219
               

               Alignm identity:
               175
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 27
               

               Conread position:
               7-131
               

               Cow position:
               
               

               Alignm length:
               128
               

               Alignm identity:
               106
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               32, 26
               

               Conread position:
               7-142
               

               Cow position:
               
               

               Alignm length:
               139
               

               Alignm identity:
               114
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               9, 28
               

               Conread position:
               7-195
               

               Cow position:
               
               

               Alignm length:
               191
               

               Alignm identity:
               148
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               28, 20
               

               Conread position:
               7-203
               

               Cow position:
               
               

               Alignm length:
               198
               

               Alignm identity:
               156
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               32, 26
               

               Conread position:
               7-203
               

               Cow position:
               
               

               Alignm length:
               198
               

               Alignm identity:
               154
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               32, 26
               

               Conread position:
               7-214
               

               Cow position:
               
               

               Alignm length:
               209
               

               Alignm identity:
               154
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               203, 102
               

               Conread position:
               7-215
               

               Cow position:
               
               

               Alignm length:
               210
               

               Alignm identity:
               154
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               32, 26
               

               Conread position:
               7-216
               

               Cow position:
               
               

               Alignm length:
               218
               

               Alignm identity:
               169
               

               Alignm E-value:
               6.00036e-42
               

               Alignm gaps (pig, cow):
               31, 26
               

               Conread position:
               8-131
               

               Cow position:
               
               

               Alignm length:
               125
               

               Alignm identity:
               101
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               31, 25
               

               Conread position:
               8-132
               

               Cow position:
               
               

               Alignm length:
               125
               

               Alignm identity:
               100
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               112, 0
               

               Conread position:
               9-134
               

               Cow position:
               
               

               Alignm length:
               127
               

               Alignm identity:
               102
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               30, 26
               

               Conread position:
               9-138
               

               Cow position:
               
               

               Alignm length:
               131
               

               Alignm identity:
               105
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               30, 24
               

               Conread position:
               9-158
               

               Cow position:
               
               

               Alignm length:
               156
               

               Alignm identity:
               125
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               30, 24
               

               Conread position:
               9-216
               

               Cow position:
               
               

               Alignm length:
               209
               

               Alignm identity:
               163
               

               Alignm E-value:
               8.40779e-45
               

               Alignm gaps (pig, cow):
               30, 24
               

               Conread position:
               9-219
               

               Cow position:
               
               

               Alignm length:
               212
               

               Alignm identity:
               169
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               30, 23
               

               Conread position:
               12-131
               

               Cow position:
               
               

               Alignm length:
               121
               

               Alignm identity:
               100
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               27, 21
               

               Conread position:
               15-215
               

               Cow position:
               
               

               Alignm length:
               202
               

               Alignm identity:
               157
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               24, 18
               

               Conread position:
               17-215
               

               Cow position:
               
               

               Alignm length:
               201
               

               Alignm identity:
               167
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               120, 0
               

               Conread position:
               17-215
               

               Cow position:
               
               

               Alignm length:
               200
               

               Alignm identity:
               158
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               22, 16
               

               Conread position:
               21-215
               

               Cow position:
               
               

               Alignm length:
               196
               

               Alignm identity:
               157
               

               Alignm E-value:
               6.00036e-42
               

               Alignm gaps (pig, cow):
               18, 12
               
Show alignments to all cow chromosomes.