Cow genome map


           Conread name:
           unkn-SGD602702291.R1
        

               Conread position:
               1-110
               

               Cow position:
               
               

               Alignm length:
               111
               

               Alignm identity:
               89
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               38, 34
               

               Conread position:
               1-138
               

               Cow position:
               
               

               Alignm length:
               142
               

               Alignm identity:
               115
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               60, 32
               

               Conread position:
               1-206
               

               Cow position:
               
               

               Alignm length:
               207
               

               Alignm identity:
               160
               

               Alignm E-value:
               6.00036e-42
               

               Alignm gaps (pig, cow):
               38, 32
               

               Conread position:
               1-213
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               171
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 32
               

               Conread position:
               1-215
               

               Cow position:
               
               

               Alignm length:
               222
               

               Alignm identity:
               175
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               43, 31
               

               Conread position:
               1-215
               

               Cow position:
               
               

               Alignm length:
               225
               

               Alignm identity:
               178
               

               Alignm E-value:
               2.8026e-45
               

               Alignm gaps (pig, cow):
               38, 32
               

               Conread position:
               1-216
               

               Cow position:
               
               

               Alignm length:
               217
               

               Alignm identity:
               178
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               38, 32
               

               Conread position:
               1-219
               

               Cow position:
               
               

               Alignm length:
               220
               

               Alignm identity:
               180
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               38, 31
               

               Conread position:
               1-225
               

               Cow position:
               
               

               Alignm length:
               227
               

               Alignm identity:
               181
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               38, 32
               

               Conread position:
               1-229
               

               Cow position:
               
               

               Alignm length:
               231
               

               Alignm identity:
               176
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               65, 32
               

               Conread position:
               1-230
               

               Cow position:
               
               

               Alignm length:
               231
               

               Alignm identity:
               177
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               38, 32
               

               Conread position:
               2-198
               

               Cow position:
               
               

               Alignm length:
               199
               

               Alignm identity:
               158
               

               Alignm E-value:
               2.8026e-45
               

               Alignm gaps (pig, cow):
               99, 0
               

               Conread position:
               2-208
               

               Cow position:
               
               

               Alignm length:
               209
               

               Alignm identity:
               171
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 31
               

               Conread position:
               2-215
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               175
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 31
               

               Conread position:
               2-215
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               181
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 31
               

               Conread position:
               3-139
               

               Cow position:
               
               

               Alignm length:
               138
               

               Alignm identity:
               116
               

               Alignm E-value:
               8e-34
               

               Alignm gaps (pig, cow):
               44, 30
               

               Conread position:
               3-161
               

               Cow position:
               
               

               Alignm length:
               160
               

               Alignm identity:
               138
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               36, 30
               

               Conread position:
               3-170
               

               Cow position:
               
               

               Alignm length:
               169
               

               Alignm identity:
               138
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               36, 28
               

               Conread position:
               3-188
               

               Cow position:
               
               

               Alignm length:
               187
               

               Alignm identity:
               148
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               36, 30
               

               Conread position:
               3-198
               

               Cow position:
               
               

               Alignm length:
               197
               

               Alignm identity:
               160
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               36, 30
               

               Conread position:
               3-198
               

               Cow position:
               
               

               Alignm length:
               198
               

               Alignm identity:
               163
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 30
               

               Conread position:
               3-205
               

               Cow position:
               
               

               Alignm length:
               204
               

               Alignm identity:
               155
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               36, 30
               

               Conread position:
               3-210
               

               Cow position:
               
               

               Alignm length:
               210
               

               Alignm identity:
               162
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               36, 30
               

               Conread position:
               3-215
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               174
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 30
               

               Conread position:
               3-215
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               176
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 30
               

               Conread position:
               3-215
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               171
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 32
               

               Conread position:
               3-215
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               168
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               36, 30
               

               Conread position:
               3-215
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               162
               

               Alignm E-value:
               5e-40
               

               Alignm gaps (pig, cow):
               36, 30
               

               Conread position:
               3-215
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               167
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               36, 32
               

               Conread position:
               3-216
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               173
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 30
               

               Conread position:
               3-216
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               171
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               193, 30
               

               Conread position:
               3-216
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               175
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 29
               

               Conread position:
               3-216
               

               Cow position:
               
               

               Alignm length:
               224
               

               Alignm identity:
               164
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               36, 30
               

               Conread position:
               3-216
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               171
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 30
               

               Conread position:
               3-217
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               165
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               3-218
               

               Cow position:
               
               

               Alignm length:
               222
               

               Alignm identity:
               171
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               36, 30
               

               Conread position:
               3-219
               

               Cow position:
               
               

               Alignm length:
               219
               

               Alignm identity:
               175
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               35, 30
               

               Conread position:
               3-222
               

               Cow position:
               
               

               Alignm length:
               223
               

               Alignm identity:
               167
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               36, 29
               

               Conread position:
               3-222
               

               Cow position:
               
               

               Alignm length:
               221
               

               Alignm identity:
               169
               

               Alignm E-value:
               7.00649e-43
               

               Alignm gaps (pig, cow):
               36, 30
               

               Conread position:
               3-229
               

               Cow position:
               
               

               Alignm length:
               229
               

               Alignm identity:
               180
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 30
               

               Conread position:
               3-230
               

               Cow position:
               
               

               Alignm length:
               229
               

               Alignm identity:
               171
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               36, 30
               

               Conread position:
               3-233
               

               Cow position:
               
               

               Alignm length:
               233
               

               Alignm identity:
               179
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 28
               

               Conread position:
               4-108
               

               Cow position:
               
               

               Alignm length:
               107
               

               Alignm identity:
               91
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               35, 29
               

               Conread position:
               4-198
               

               Cow position:
               
               

               Alignm length:
               195
               

               Alignm identity:
               157
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               84, 0
               

               Conread position:
               5-190
               

               Cow position:
               
               

               Alignm length:
               188
               

               Alignm identity:
               147
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               34, 27
               

               Conread position:
               5-214
               

               Cow position:
               
               

               Alignm length:
               211
               

               Alignm identity:
               163
               

               Alignm E-value:
               7.00649e-44
               

               Alignm gaps (pig, cow):
               34, 28
               

               Conread position:
               5-215
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               171
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 28
               

               Conread position:
               5-216
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               169
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 28
               

               Conread position:
               5-216
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               180
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 27
               

               Conread position:
               5-222
               

               Cow position:
               
               

               Alignm length:
               220
               

               Alignm identity:
               167
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               34, 28
               

               Conread position:
               6-154
               

               Cow position:
               
               

               Alignm length:
               149
               

               Alignm identity:
               115
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               6-195
               

               Cow position:
               
               

               Alignm length:
               191
               

               Alignm identity:
               160
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               82, 56
               

               Conread position:
               6-196
               

               Cow position:
               
               

               Alignm length:
               192
               

               Alignm identity:
               152
               

               Alignm E-value:
               4.99997e-41
               

               Alignm gaps (pig, cow):
               33, 8
               

               Conread position:
               6-205
               

               Cow position:
               
               

               Alignm length:
               201
               

               Alignm identity:
               162
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 27
               

               Conread position:
               6-205
               

               Cow position:
               
               

               Alignm length:
               201
               

               Alignm identity:
               159
               

               Alignm E-value:
               8.40779e-45
               

               Alignm gaps (pig, cow):
               33, 27
               

               Conread position:
               6-206
               

               Cow position:
               
               

               Alignm length:
               202
               

               Alignm identity:
               164
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 27
               

               Conread position:
               6-210
               

               Cow position:
               
               

               Alignm length:
               205
               

               Alignm identity:
               157
               

               Alignm E-value:
               7.00649e-43
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               6-213
               

               Cow position:
               
               

               Alignm length:
               209
               

               Alignm identity:
               169
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 26
               

               Conread position:
               6-214
               

               Cow position:
               
               

               Alignm length:
               209
               

               Alignm identity:
               167
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               6-214
               

               Cow position:
               
               

               Alignm length:
               210
               

               Alignm identity:
               163
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               33, 27
               

               Conread position:
               6-215
               

               Cow position:
               
               

               Alignm length:
               212
               

               Alignm identity:
               167
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               31, 27
               

               Conread position:
               6-215
               

               Cow position:
               
               

               Alignm length:
               210
               

               Alignm identity:
               166
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               118, 0
               

               Conread position:
               6-215
               

               Cow position:
               
               

               Alignm length:
               210
               

               Alignm identity:
               163
               

               Alignm E-value:
               2.8026e-45
               

               Alignm gaps (pig, cow):
               181, 0
               

               Conread position:
               7-134
               

               Cow position:
               
               

               Alignm length:
               129
               

               Alignm identity:
               106
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               7-145
               

               Cow position:
               
               

               Alignm length:
               143
               

               Alignm identity:
               113
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               32, 28
               

               Conread position:
               7-205
               

               Cow position:
               
               

               Alignm length:
               201
               

               Alignm identity:
               159
               

               Alignm E-value:
               6.00036e-42
               

               Alignm gaps (pig, cow):
               32, 26
               

               Conread position:
               7-211
               

               Cow position:
               
               

               Alignm length:
               207
               

               Alignm identity:
               161
               

               Alignm E-value:
               7.00649e-43
               

               Alignm gaps (pig, cow):
               32, 25
               

               Conread position:
               7-214
               

               Cow position:
               
               

               Alignm length:
               209
               

               Alignm identity:
               173
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 26
               

               Conread position:
               7-214
               

               Cow position:
               
               

               Alignm length:
               209
               

               Alignm identity:
               165
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 26
               

               Conread position:
               7-216
               

               Cow position:
               
               

               Alignm length:
               211
               

               Alignm identity:
               167
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 26
               

               Conread position:
               7-217
               

               Cow position:
               
               

               Alignm length:
               212
               

               Alignm identity:
               171
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 26
               

               Conread position:
               7-217
               

               Cow position:
               
               

               Alignm length:
               212
               

               Alignm identity:
               168
               

               Alignm E-value:
               2.8026e-45
               

               Alignm gaps (pig, cow):
               32, 26
               

               Conread position:
               7-223
               

               Cow position:
               
               

               Alignm length:
               218
               

               Alignm identity:
               172
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 26
               

               Conread position:
               7-225
               

               Cow position:
               
               

               Alignm length:
               222
               

               Alignm identity:
               178
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 24
               

               Conread position:
               8-212
               

               Cow position:
               
               

               Alignm length:
               206
               

               Alignm identity:
               168
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               31, 25
               

               Conread position:
               8-216
               

               Cow position:
               
               

               Alignm length:
               210
               

               Alignm identity:
               158
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               31, 25
               

               Conread position:
               8-222
               

               Cow position:
               
               

               Alignm length:
               217
               

               Alignm identity:
               168
               

               Alignm E-value:
               7.00649e-44
               

               Alignm gaps (pig, cow):
               31, 25
               

               Conread position:
               9-169
               

               Cow position:
               
               

               Alignm length:
               162
               

               Alignm identity:
               135
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               30, 11
               

               Conread position:
               9-204
               

               Cow position:
               
               

               Alignm length:
               199
               

               Alignm identity:
               169
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               30, 24
               

               Conread position:
               9-212
               

               Cow position:
               
               

               Alignm length:
               205
               

               Alignm identity:
               156
               

               Alignm E-value:
               5e-40
               

               Alignm gaps (pig, cow):
               30, 22
               

               Conread position:
               10-214
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               162
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               29, 22
               

               Conread position:
               10-215
               

               Cow position:
               
               

               Alignm length:
               207
               

               Alignm identity:
               162
               

               Alignm E-value:
               8.40779e-45
               

               Alignm gaps (pig, cow):
               29, 17
               

               Conread position:
               10-215
               

               Cow position:
               
               

               Alignm length:
               207
               

               Alignm identity:
               160
               

               Alignm E-value:
               5e-40
               

               Alignm gaps (pig, cow):
               30, 23
               

               Conread position:
               12-119
               

               Cow position:
               
               

               Alignm length:
               108
               

               Alignm identity:
               87
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               14-215
               

               Cow position:
               
               

               Alignm length:
               203
               

               Alignm identity:
               157
               

               Alignm E-value:
               4.99997e-41
               

               Alignm gaps (pig, cow):
               25, 19
               

               Conread position:
               15-211
               

               Cow position:
               
               

               Alignm length:
               207
               

               Alignm identity:
               153
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               9, 19
               

               Conread position:
               20-142
               

               Cow position:
               
               

               Alignm length:
               125
               

               Alignm identity:
               102
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               19, 13
               

               Conread position:
               20-215
               

               Cow position:
               
               

               Alignm length:
               210
               

               Alignm identity:
               154
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               102, 90
               
Show alignments to all cow chromosomes.