Cow genome map

Conread name: unkn-SGD602702291.R1

Conread position: 1-110
Cow position: chr15:23689260-23689151 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 89
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 38, 34

Conread position: 1-138
Cow position: chr15:8776534-8776673 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 115
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 60, 32

Conread position: 1-206
Cow position: chr15:636066-636270 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 160
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 38, 32

Conread position: 1-213
Cow position: chr15:11081124-11081337 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 171
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 32

Conread position: 1-215
Cow position: chr15:41428246-41428466 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 175
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 31

Conread position: 1-215
Cow position: chr15:51403233-51403456 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 178
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 38, 32

Conread position: 1-216
Cow position: chr15:41333411-41333622 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 178
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 32

Conread position: 1-219
Cow position: chr15:49150135-49149917 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 180
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 31

Conread position: 1-225
Cow position: chr15:16582070-16582294 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 181
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 32

Conread position: 1-229
Cow position: chr15:17715828-17716057 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 176
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 65, 32

Conread position: 1-230
Cow position: chr15:8639197-8638969 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 177
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 32

Conread position: 2-198
Cow position: chr15:36624454-36624256 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 158
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 99, 0

Conread position: 2-208
Cow position: chr15:46040200-46039993 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 171
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 31

Conread position: 2-215
Cow position: chr15:7442421-7442634 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 175
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 31

Conread position: 2-215
Cow position: chr15:48601948-48601736 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 181
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 31

Conread position: 3-139
Cow position: chr15:15158447-15158583 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 116
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 44, 30

Conread position: 3-161
Cow position: chr15:12692927-12692769 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 138
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 36, 30

Conread position: 3-170
Cow position: chr15:2208061-2207895 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 138
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 36, 28

Conread position: 3-188
Cow position: chr15:49206034-49206215 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 148
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 36, 30

Conread position: 3-198
Cow position: chr15:3234243-3234050 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 160
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 36, 30

Conread position: 3-198
Cow position: chr15:50531737-50531933 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 163
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 30

Conread position: 3-205
Cow position: chr15:2987931-2988132 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 155
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 36, 30

Conread position: 3-210
Cow position: chr15:40618420-40618627 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 162
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 36, 30

Conread position: 3-215
Cow position: chr15:1717376-1717164 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 174
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 30

Conread position: 3-215
Cow position: chr15:5534817-5535028 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 176
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 30

Conread position: 3-215
Cow position: chr15:29345474-29345265 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 171
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 32

Conread position: 3-215
Cow position: chr15:37432173-37431959 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 168
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 36, 30

Conread position: 3-215
Cow position: chr15:42852849-42853059 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 162
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 36, 30

Conread position: 3-215
Cow position: chr15:49722767-49722967 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 167
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 36, 32

Conread position: 3-216
Cow position: chr15:16452387-16452599 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 173
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 30

Conread position: 3-216
Cow position: chr15:21831071-21831283 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 171
Alignm E-value: 0
Alignm gaps (pig, cow): 193, 30

Conread position: 3-216
Cow position: chr15:26331089-26331302 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 175
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 29

Conread position: 3-216
Cow position: chr15:40376239-40376459 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 164
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 36, 30

Conread position: 3-216
Cow position: chr15:52750431-52750644 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 171
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 30

Conread position: 3-217
Cow position: chr15:5109792-5110006 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 165
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 0, 0

Conread position: 3-218
Cow position: chr15:9491190-9491409 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 171
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 36, 30

Conread position: 3-219
Cow position: chr15:1543334-1543550 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 175
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 30

Conread position: 3-222
Cow position: chr15:42783713-42783933 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 167
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 36, 29

Conread position: 3-222
Cow position: chr15:52953842-52953625 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 169
Alignm E-value: 7.00649e-43
Alignm gaps (pig, cow): 36, 30

Conread position: 3-229
Cow position: chr15:17236645-17236421 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 180
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 30

Conread position: 3-230
Cow position: chr15:13845273-13845491 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 171
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 36, 30

Conread position: 3-233
Cow position: chr15:24186913-24187143 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 179
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 28

Conread position: 4-108
Cow position: chr15:5135291-5135186 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 91
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 35, 29

Conread position: 4-198
Cow position: chr15:4178700-4178508 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 157
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 84, 0

Conread position: 5-190
Cow position: chr15:37771359-37771174 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 147
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 34, 27

Conread position: 5-214
Cow position: chr15:262349-262558 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 163
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 34, 28

Conread position: 5-215
Cow position: chr15:28108988-28109199 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 171
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 28

Conread position: 5-216
Cow position: chr15:9380984-9380772 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 169
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 28

Conread position: 5-216
Cow position: chr15:47456558-47456770 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 180
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 27

Conread position: 5-222
Cow position: chr15:49037602-49037820 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 167
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 34, 28

Conread position: 6-154
Cow position: chr15:52746998-52746850 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 115
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 6-195
Cow position: chr15:13931802-13931614 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 160
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 56

Conread position: 6-196
Cow position: chr15:41584083-41583895 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 152
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 33, 8

Conread position: 6-205
Cow position: chr15:3026134-3026333 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 162
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 27

Conread position: 6-205
Cow position: chr15:8240398-8240597 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 159
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 33, 27

Conread position: 6-206
Cow position: chr15:45123173-45123372 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 164
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 27

Conread position: 6-210
Cow position: chr15:23065336-23065540 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 157
Alignm E-value: 7.00649e-43
Alignm gaps (pig, cow): 0, 0

Conread position: 6-213
Cow position: chr15:37578858-37578651 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 169
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 26

Conread position: 6-214
Cow position: chr15:23189743-23189535 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 167
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 6-214
Cow position: chr15:42680683-42680884 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 163
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 33, 27

Conread position: 6-215
Cow position: chr15:8666310-8666520 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 167
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 27

Conread position: 6-215
Cow position: chr15:9341264-9341472 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 166
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 0

Conread position: 6-215
Cow position: chr15:41585151-41584943 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 163
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 181, 0

Conread position: 7-134
Cow position: chr15:49690813-49690941 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 106
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 9, 0

Conread position: 7-145
Cow position: chr15:52795987-52796128 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 113
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 32, 28

Conread position: 7-205
Cow position: chr15:37788181-37787984 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 159
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 32, 26

Conread position: 7-211
Cow position: chr15:29505855-29506060 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 161
Alignm E-value: 7.00649e-43
Alignm gaps (pig, cow): 32, 25

Conread position: 7-214
Cow position: chr15:19349030-19348825 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 173
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 26

Conread position: 7-214
Cow position: chr15:37479951-37480158 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 165
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 26

Conread position: 7-216
Cow position: chr15:30961972-30961764 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 167
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 26

Conread position: 7-217
Cow position: chr15:23914820-23914610 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 171
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 26

Conread position: 7-217
Cow position: chr15:35271378-35271584 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 168
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 32, 26

Conread position: 7-223
Cow position: chr15:26212950-26213166 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 172
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 26

Conread position: 7-225
Cow position: chr15:34554456-34554237 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 178
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 24

Conread position: 8-212
Cow position: chr15:25459421-25459625 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 168
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 25

Conread position: 8-216
Cow position: chr15:21296031-21296238 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 158
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 31, 25

Conread position: 8-222
Cow position: chr15:13715557-13715771 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 168
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 31, 25

Conread position: 9-169
Cow position: chr15:49096377-49096218 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 135
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 30, 11

Conread position: 9-204
Cow position: chr15:18476483-18476287 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 169
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 24

Conread position: 9-212
Cow position: chr15:45733550-45733753 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 156
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 30, 22

Conread position: 10-214
Cow position: chr15:14621640-14621853 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 162
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 29, 22

Conread position: 10-215
Cow position: chr15:26905378-26905173 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 162
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 29, 17

Conread position: 10-215
Cow position: chr15:46002301-46002503 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 160
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 30, 23

Conread position: 12-119
Cow position: chr15:28051581-28051688 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 87
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 14-215
Cow position: chr15:45315011-45315211 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 157
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 25, 19

Conread position: 15-211
Cow position: chr15:49431486-49431691 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 153
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 9, 19

Conread position: 20-142
Cow position: chr15:19109372-19109251 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 102
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 19, 13

Conread position: 20-215
Cow position: chr15:1582083-1581875 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 154
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 102, 90

Show alignments to all cow chromosomes.