Cow genome map
Conread name: | unkn-SGD602702291.R1 |
Conread position: | 1-110 |
Cow position: | chr15:23689260-23689151 (view UCSC Genome Browser custom track) |
Alignm length: | 111 |
Alignm identity: | 89 |
Alignm E-value: | 6e-21 |
Alignm gaps (pig, cow): | 38, 34 |
Conread position: | 1-138 |
Cow position: | chr15:8776534-8776673 (view UCSC Genome Browser custom track) |
Alignm length: | 142 |
Alignm identity: | 115 |
Alignm E-value: | 1e-28 |
Alignm gaps (pig, cow): | 60, 32 |
Conread position: | 1-206 |
Cow position: | chr15:636066-636270 (view UCSC Genome Browser custom track) |
Alignm length: | 207 |
Alignm identity: | 160 |
Alignm E-value: | 6.00036e-42 |
Alignm gaps (pig, cow): | 38, 32 |
Conread position: | 1-213 |
Cow position: | chr15:11081124-11081337 (view UCSC Genome Browser custom track) |
Alignm length: | 215 |
Alignm identity: | 171 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 11, 32 |
Conread position: | 1-215 |
Cow position: | chr15:41428246-41428466 (view UCSC Genome Browser custom track) |
Alignm length: | 222 |
Alignm identity: | 175 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 43, 31 |
Conread position: | 1-215 |
Cow position: | chr15:51403233-51403456 (view UCSC Genome Browser custom track) |
Alignm length: | 225 |
Alignm identity: | 178 |
Alignm E-value: | 2.8026e-45 |
Alignm gaps (pig, cow): | 38, 32 |
Conread position: | 1-216 |
Cow position: | chr15:41333411-41333622 (view UCSC Genome Browser custom track) |
Alignm length: | 217 |
Alignm identity: | 178 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 38, 32 |
Conread position: | 1-219 |
Cow position: | chr15:49150135-49149917 (view UCSC Genome Browser custom track) |
Alignm length: | 220 |
Alignm identity: | 180 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 38, 31 |
Conread position: | 1-225 |
Cow position: | chr15:16582070-16582294 (view UCSC Genome Browser custom track) |
Alignm length: | 227 |
Alignm identity: | 181 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 38, 32 |
Conread position: | 1-229 |
Cow position: | chr15:17715828-17716057 (view UCSC Genome Browser custom track) |
Alignm length: | 231 |
Alignm identity: | 176 |
Alignm E-value: | 1.4013e-45 |
Alignm gaps (pig, cow): | 65, 32 |
Conread position: | 1-230 |
Cow position: | chr15:8639197-8638969 (view UCSC Genome Browser custom track) |
Alignm length: | 231 |
Alignm identity: | 177 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 38, 32 |
Conread position: | 2-198 |
Cow position: | chr15:36624454-36624256 (view UCSC Genome Browser custom track) |
Alignm length: | 199 |
Alignm identity: | 158 |
Alignm E-value: | 2.8026e-45 |
Alignm gaps (pig, cow): | 99, 0 |
Conread position: | 2-208 |
Cow position: | chr15:46040200-46039993 (view UCSC Genome Browser custom track) |
Alignm length: | 209 |
Alignm identity: | 171 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 37, 31 |
Conread position: | 2-215 |
Cow position: | chr15:7442421-7442634 (view UCSC Genome Browser custom track) |
Alignm length: | 215 |
Alignm identity: | 175 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 37, 31 |
Conread position: | 2-215 |
Cow position: | chr15:48601948-48601736 (view UCSC Genome Browser custom track) |
Alignm length: | 215 |
Alignm identity: | 181 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 37, 31 |
Conread position: | 3-139 |
Cow position: | chr15:15158447-15158583 (view UCSC Genome Browser custom track) |
Alignm length: | 138 |
Alignm identity: | 116 |
Alignm E-value: | 8e-34 |
Alignm gaps (pig, cow): | 44, 30 |
Conread position: | 3-161 |
Cow position: | chr15:12692927-12692769 (view UCSC Genome Browser custom track) |
Alignm length: | 160 |
Alignm identity: | 138 |
Alignm E-value: | 1.96182e-44 |
Alignm gaps (pig, cow): | 36, 30 |
Conread position: | 3-170 |
Cow position: | chr15:2208061-2207895 (view UCSC Genome Browser custom track) |
Alignm length: | 169 |
Alignm identity: | 138 |
Alignm E-value: | 4e-39 |
Alignm gaps (pig, cow): | 36, 28 |
Conread position: | 3-188 |
Cow position: | chr15:49206034-49206215 (view UCSC Genome Browser custom track) |
Alignm length: | 187 |
Alignm identity: | 148 |
Alignm E-value: | 4e-38 |
Alignm gaps (pig, cow): | 36, 30 |
Conread position: | 3-198 |
Cow position: | chr15:3234243-3234050 (view UCSC Genome Browser custom track) |
Alignm length: | 197 |
Alignm identity: | 160 |
Alignm E-value: | 1.4013e-45 |
Alignm gaps (pig, cow): | 36, 30 |
Conread position: | 3-198 |
Cow position: | chr15:50531737-50531933 (view UCSC Genome Browser custom track) |
Alignm length: | 198 |
Alignm identity: | 163 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 36, 30 |
Conread position: | 3-205 |
Cow position: | chr15:2987931-2988132 (view UCSC Genome Browser custom track) |
Alignm length: | 204 |
Alignm identity: | 155 |
Alignm E-value: | 1e-38 |
Alignm gaps (pig, cow): | 36, 30 |
Conread position: | 3-210 |
Cow position: | chr15:40618420-40618627 (view UCSC Genome Browser custom track) |
Alignm length: | 210 |
Alignm identity: | 162 |
Alignm E-value: | 1.99993e-41 |
Alignm gaps (pig, cow): | 36, 30 |
Conread position: | 3-215 |
Cow position: | chr15:1717376-1717164 (view UCSC Genome Browser custom track) |
Alignm length: | 214 |
Alignm identity: | 174 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 36, 30 |
Conread position: | 3-215 |
Cow position: | chr15:5534817-5535028 (view UCSC Genome Browser custom track) |
Alignm length: | 214 |
Alignm identity: | 176 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 36, 30 |
Conread position: | 3-215 |
Cow position: | chr15:29345474-29345265 (view UCSC Genome Browser custom track) |
Alignm length: | 214 |
Alignm identity: | 171 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 36, 32 |
Conread position: | 3-215 |
Cow position: | chr15:37432173-37431959 (view UCSC Genome Browser custom track) |
Alignm length: | 216 |
Alignm identity: | 168 |
Alignm E-value: | 1.96182e-44 |
Alignm gaps (pig, cow): | 36, 30 |
Conread position: | 3-215 |
Cow position: | chr15:42852849-42853059 (view UCSC Genome Browser custom track) |
Alignm length: | 214 |
Alignm identity: | 162 |
Alignm E-value: | 5e-40 |
Alignm gaps (pig, cow): | 36, 30 |
Conread position: | 3-215 |
Cow position: | chr15:49722767-49722967 (view UCSC Genome Browser custom track) |
Alignm length: | 214 |
Alignm identity: | 167 |
Alignm E-value: | 1e-38 |
Alignm gaps (pig, cow): | 36, 32 |
Conread position: | 3-216 |
Cow position: | chr15:16452387-16452599 (view UCSC Genome Browser custom track) |
Alignm length: | 215 |
Alignm identity: | 173 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 36, 30 |
Conread position: | 3-216 |
Cow position: | chr15:21831071-21831283 (view UCSC Genome Browser custom track) |
Alignm length: | 215 |
Alignm identity: | 171 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 193, 30 |
Conread position: | 3-216 |
Cow position: | chr15:26331089-26331302 (view UCSC Genome Browser custom track) |
Alignm length: | 215 |
Alignm identity: | 175 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 36, 29 |
Conread position: | 3-216 |
Cow position: | chr15:40376239-40376459 (view UCSC Genome Browser custom track) |
Alignm length: | 224 |
Alignm identity: | 164 |
Alignm E-value: | 6e-32 |
Alignm gaps (pig, cow): | 36, 30 |
Conread position: | 3-216 |
Cow position: | chr15:52750431-52750644 (view UCSC Genome Browser custom track) |
Alignm length: | 215 |
Alignm identity: | 171 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 36, 30 |
Conread position: | 3-217 |
Cow position: | chr15:5109792-5110006 (view UCSC Genome Browser custom track) |
Alignm length: | 215 |
Alignm identity: | 165 |
Alignm E-value: | 1.4013e-45 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 3-218 |
Cow position: | chr15:9491190-9491409 (view UCSC Genome Browser custom track) |
Alignm length: | 222 |
Alignm identity: | 171 |
Alignm E-value: | 1.99965e-42 |
Alignm gaps (pig, cow): | 36, 30 |
Conread position: | 3-219 |
Cow position: | chr15:1543334-1543550 (view UCSC Genome Browser custom track) |
Alignm length: | 219 |
Alignm identity: | 175 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 35, 30 |
Conread position: | 3-222 |
Cow position: | chr15:42783713-42783933 (view UCSC Genome Browser custom track) |
Alignm length: | 223 |
Alignm identity: | 167 |
Alignm E-value: | 4e-39 |
Alignm gaps (pig, cow): | 36, 29 |
Conread position: | 3-222 |
Cow position: | chr15:52953842-52953625 (view UCSC Genome Browser custom track) |
Alignm length: | 221 |
Alignm identity: | 169 |
Alignm E-value: | 7.00649e-43 |
Alignm gaps (pig, cow): | 36, 30 |
Conread position: | 3-229 |
Cow position: | chr15:17236645-17236421 (view UCSC Genome Browser custom track) |
Alignm length: | 229 |
Alignm identity: | 180 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 36, 30 |
Conread position: | 3-230 |
Cow position: | chr15:13845273-13845491 (view UCSC Genome Browser custom track) |
Alignm length: | 229 |
Alignm identity: | 171 |
Alignm E-value: | 1e-36 |
Alignm gaps (pig, cow): | 36, 30 |
Conread position: | 3-233 |
Cow position: | chr15:24186913-24187143 (view UCSC Genome Browser custom track) |
Alignm length: | 233 |
Alignm identity: | 179 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 36, 28 |
Conread position: | 4-108 |
Cow position: | chr15:5135291-5135186 (view UCSC Genome Browser custom track) |
Alignm length: | 107 |
Alignm identity: | 91 |
Alignm E-value: | 8e-24 |
Alignm gaps (pig, cow): | 35, 29 |
Conread position: | 4-198 |
Cow position: | chr15:4178700-4178508 (view UCSC Genome Browser custom track) |
Alignm length: | 195 |
Alignm identity: | 157 |
Alignm E-value: | 1.4013e-45 |
Alignm gaps (pig, cow): | 84, 0 |
Conread position: | 5-190 |
Cow position: | chr15:37771359-37771174 (view UCSC Genome Browser custom track) |
Alignm length: | 188 |
Alignm identity: | 147 |
Alignm E-value: | 1e-37 |
Alignm gaps (pig, cow): | 34, 27 |
Conread position: | 5-214 |
Cow position: | chr15:262349-262558 (view UCSC Genome Browser custom track) |
Alignm length: | 211 |
Alignm identity: | 163 |
Alignm E-value: | 7.00649e-44 |
Alignm gaps (pig, cow): | 34, 28 |
Conread position: | 5-215 |
Cow position: | chr15:28108988-28109199 (view UCSC Genome Browser custom track) |
Alignm length: | 213 |
Alignm identity: | 171 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 34, 28 |
Conread position: | 5-216 |
Cow position: | chr15:9380984-9380772 (view UCSC Genome Browser custom track) |
Alignm length: | 214 |
Alignm identity: | 169 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 34, 28 |
Conread position: | 5-216 |
Cow position: | chr15:47456558-47456770 (view UCSC Genome Browser custom track) |
Alignm length: | 214 |
Alignm identity: | 180 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 34, 27 |
Conread position: | 5-222 |
Cow position: | chr15:49037602-49037820 (view UCSC Genome Browser custom track) |
Alignm length: | 220 |
Alignm identity: | 167 |
Alignm E-value: | 1.99965e-42 |
Alignm gaps (pig, cow): | 34, 28 |
Conread position: | 6-154 |
Cow position: | chr15:52746998-52746850 (view UCSC Genome Browser custom track) |
Alignm length: | 149 |
Alignm identity: | 115 |
Alignm E-value: | 2e-29 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 6-195 |
Cow position: | chr15:13931802-13931614 (view UCSC Genome Browser custom track) |
Alignm length: | 191 |
Alignm identity: | 160 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 82, 56 |
Conread position: | 6-196 |
Cow position: | chr15:41584083-41583895 (view UCSC Genome Browser custom track) |
Alignm length: | 192 |
Alignm identity: | 152 |
Alignm E-value: | 4.99997e-41 |
Alignm gaps (pig, cow): | 33, 8 |
Conread position: | 6-205 |
Cow position: | chr15:3026134-3026333 (view UCSC Genome Browser custom track) |
Alignm length: | 201 |
Alignm identity: | 162 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 33, 27 |
Conread position: | 6-205 |
Cow position: | chr15:8240398-8240597 (view UCSC Genome Browser custom track) |
Alignm length: | 201 |
Alignm identity: | 159 |
Alignm E-value: | 8.40779e-45 |
Alignm gaps (pig, cow): | 33, 27 |
Conread position: | 6-206 |
Cow position: | chr15:45123173-45123372 (view UCSC Genome Browser custom track) |
Alignm length: | 202 |
Alignm identity: | 164 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 33, 27 |
Conread position: | 6-210 |
Cow position: | chr15:23065336-23065540 (view UCSC Genome Browser custom track) |
Alignm length: | 205 |
Alignm identity: | 157 |
Alignm E-value: | 7.00649e-43 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 6-213 |
Cow position: | chr15:37578858-37578651 (view UCSC Genome Browser custom track) |
Alignm length: | 209 |
Alignm identity: | 169 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 33, 26 |
Conread position: | 6-214 |
Cow position: | chr15:23189743-23189535 (view UCSC Genome Browser custom track) |
Alignm length: | 209 |
Alignm identity: | 167 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 6-214 |
Cow position: | chr15:42680683-42680884 (view UCSC Genome Browser custom track) |
Alignm length: | 210 |
Alignm identity: | 163 |
Alignm E-value: | 2e-40 |
Alignm gaps (pig, cow): | 33, 27 |
Conread position: | 6-215 |
Cow position: | chr15:8666310-8666520 (view UCSC Genome Browser custom track) |
Alignm length: | 212 |
Alignm identity: | 167 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 31, 27 |
Conread position: | 6-215 |
Cow position: | chr15:9341264-9341472 (view UCSC Genome Browser custom track) |
Alignm length: | 210 |
Alignm identity: | 166 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 118, 0 |
Conread position: | 6-215 |
Cow position: | chr15:41585151-41584943 (view UCSC Genome Browser custom track) |
Alignm length: | 210 |
Alignm identity: | 163 |
Alignm E-value: | 2.8026e-45 |
Alignm gaps (pig, cow): | 181, 0 |
Conread position: | 7-134 |
Cow position: | chr15:49690813-49690941 (view UCSC Genome Browser custom track) |
Alignm length: | 129 |
Alignm identity: | 106 |
Alignm E-value: | 2e-29 |
Alignm gaps (pig, cow): | 9, 0 |
Conread position: | 7-145 |
Cow position: | chr15:52795987-52796128 (view UCSC Genome Browser custom track) |
Alignm length: | 143 |
Alignm identity: | 113 |
Alignm E-value: | 1e-26 |
Alignm gaps (pig, cow): | 32, 28 |
Conread position: | 7-205 |
Cow position: | chr15:37788181-37787984 (view UCSC Genome Browser custom track) |
Alignm length: | 201 |
Alignm identity: | 159 |
Alignm E-value: | 6.00036e-42 |
Alignm gaps (pig, cow): | 32, 26 |
Conread position: | 7-211 |
Cow position: | chr15:29505855-29506060 (view UCSC Genome Browser custom track) |
Alignm length: | 207 |
Alignm identity: | 161 |
Alignm E-value: | 7.00649e-43 |
Alignm gaps (pig, cow): | 32, 25 |
Conread position: | 7-214 |
Cow position: | chr15:19349030-19348825 (view UCSC Genome Browser custom track) |
Alignm length: | 209 |
Alignm identity: | 173 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 32, 26 |
Conread position: | 7-214 |
Cow position: | chr15:37479951-37480158 (view UCSC Genome Browser custom track) |
Alignm length: | 209 |
Alignm identity: | 165 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 32, 26 |
Conread position: | 7-216 |
Cow position: | chr15:30961972-30961764 (view UCSC Genome Browser custom track) |
Alignm length: | 211 |
Alignm identity: | 167 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 32, 26 |
Conread position: | 7-217 |
Cow position: | chr15:23914820-23914610 (view UCSC Genome Browser custom track) |
Alignm length: | 212 |
Alignm identity: | 171 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 32, 26 |
Conread position: | 7-217 |
Cow position: | chr15:35271378-35271584 (view UCSC Genome Browser custom track) |
Alignm length: | 212 |
Alignm identity: | 168 |
Alignm E-value: | 2.8026e-45 |
Alignm gaps (pig, cow): | 32, 26 |
Conread position: | 7-223 |
Cow position: | chr15:26212950-26213166 (view UCSC Genome Browser custom track) |
Alignm length: | 218 |
Alignm identity: | 172 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 32, 26 |
Conread position: | 7-225 |
Cow position: | chr15:34554456-34554237 (view UCSC Genome Browser custom track) |
Alignm length: | 222 |
Alignm identity: | 178 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 32, 24 |
Conread position: | 8-212 |
Cow position: | chr15:25459421-25459625 (view UCSC Genome Browser custom track) |
Alignm length: | 206 |
Alignm identity: | 168 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 31, 25 |
Conread position: | 8-216 |
Cow position: | chr15:21296031-21296238 (view UCSC Genome Browser custom track) |
Alignm length: | 210 |
Alignm identity: | 158 |
Alignm E-value: | 1e-38 |
Alignm gaps (pig, cow): | 31, 25 |
Conread position: | 8-222 |
Cow position: | chr15:13715557-13715771 (view UCSC Genome Browser custom track) |
Alignm length: | 217 |
Alignm identity: | 168 |
Alignm E-value: | 7.00649e-44 |
Alignm gaps (pig, cow): | 31, 25 |
Conread position: | 9-169 |
Cow position: | chr15:49096377-49096218 (view UCSC Genome Browser custom track) |
Alignm length: | 162 |
Alignm identity: | 135 |
Alignm E-value: | 1e-39 |
Alignm gaps (pig, cow): | 30, 11 |
Conread position: | 9-204 |
Cow position: | chr15:18476483-18476287 (view UCSC Genome Browser custom track) |
Alignm length: | 199 |
Alignm identity: | 169 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 30, 24 |
Conread position: | 9-212 |
Cow position: | chr15:45733550-45733753 (view UCSC Genome Browser custom track) |
Alignm length: | 205 |
Alignm identity: | 156 |
Alignm E-value: | 5e-40 |
Alignm gaps (pig, cow): | 30, 22 |
Conread position: | 10-214 |
Cow position: | chr15:14621640-14621853 (view UCSC Genome Browser custom track) |
Alignm length: | 215 |
Alignm identity: | 162 |
Alignm E-value: | 3e-36 |
Alignm gaps (pig, cow): | 29, 22 |
Conread position: | 10-215 |
Cow position: | chr15:26905378-26905173 (view UCSC Genome Browser custom track) |
Alignm length: | 207 |
Alignm identity: | 162 |
Alignm E-value: | 8.40779e-45 |
Alignm gaps (pig, cow): | 29, 17 |
Conread position: | 10-215 |
Cow position: | chr15:46002301-46002503 (view UCSC Genome Browser custom track) |
Alignm length: | 207 |
Alignm identity: | 160 |
Alignm E-value: | 5e-40 |
Alignm gaps (pig, cow): | 30, 23 |
Conread position: | 12-119 |
Cow position: | chr15:28051581-28051688 (view UCSC Genome Browser custom track) |
Alignm length: | 108 |
Alignm identity: | 87 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 14-215 |
Cow position: | chr15:45315011-45315211 (view UCSC Genome Browser custom track) |
Alignm length: | 203 |
Alignm identity: | 157 |
Alignm E-value: | 4.99997e-41 |
Alignm gaps (pig, cow): | 25, 19 |
Conread position: | 15-211 |
Cow position: | chr15:49431486-49431691 (view UCSC Genome Browser custom track) |
Alignm length: | 207 |
Alignm identity: | 153 |
Alignm E-value: | 5e-30 |
Alignm gaps (pig, cow): | 9, 19 |
Conread position: | 20-142 |
Cow position: | chr15:19109372-19109251 (view UCSC Genome Browser custom track) |
Alignm length: | 125 |
Alignm identity: | 102 |
Alignm E-value: | 3e-24 |
Alignm gaps (pig, cow): | 19, 13 |
Conread position: | 20-215 |
Cow position: | chr15:1582083-1581875 (view UCSC Genome Browser custom track) |
Alignm length: | 210 |
Alignm identity: | 154 |
Alignm E-value: | 4e-27 |
Alignm gaps (pig, cow): | 102, 90 |
Show alignments to all cow chromosomes.