Cow genome map
Conread name: | unkn-SGD602702291.R1 |
Conread position: | 1-170 |
Cow position: | chr16:27300153-27300322 (view UCSC Genome Browser custom track) |
Alignm length: | 172 |
Alignm identity: | 139 |
Alignm E-value: | 4e-38 |
Alignm gaps (pig, cow): | 56, 32 |
Conread position: | 1-214 |
Cow position: | chr16:18045268-18045474 (view UCSC Genome Browser custom track) |
Alignm length: | 215 |
Alignm identity: | 166 |
Alignm E-value: | 5e-40 |
Alignm gaps (pig, cow): | 38, 33 |
Conread position: | 1-216 |
Cow position: | chr16:11644124-11643909 (view UCSC Genome Browser custom track) |
Alignm length: | 217 |
Alignm identity: | 176 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 38, 32 |
Conread position: | 2-124 |
Cow position: | chr16:52803726-52803602 (view UCSC Genome Browser custom track) |
Alignm length: | 126 |
Alignm identity: | 104 |
Alignm E-value: | 1e-26 |
Alignm gaps (pig, cow): | 43, 31 |
Conread position: | 2-170 |
Cow position: | chr16:52222196-52222025 (view UCSC Genome Browser custom track) |
Alignm length: | 173 |
Alignm identity: | 140 |
Alignm E-value: | 1e-37 |
Alignm gaps (pig, cow): | 37, 31 |
Conread position: | 2-198 |
Cow position: | chr16:38228317-38228512 (view UCSC Genome Browser custom track) |
Alignm length: | 198 |
Alignm identity: | 155 |
Alignm E-value: | 1.99993e-41 |
Alignm gaps (pig, cow): | 37, 31 |
Conread position: | 2-213 |
Cow position: | chr16:9964081-9963870 (view UCSC Genome Browser custom track) |
Alignm length: | 213 |
Alignm identity: | 161 |
Alignm E-value: | 5.99994e-41 |
Alignm gaps (pig, cow): | 193, 175 |
Conread position: | 2-215 |
Cow position: | chr16:13608167-13607953 (view UCSC Genome Browser custom track) |
Alignm length: | 216 |
Alignm identity: | 167 |
Alignm E-value: | 2.94273e-44 |
Alignm gaps (pig, cow): | 37, 31 |
Conread position: | 2-219 |
Cow position: | chr16:36222740-36222957 (view UCSC Genome Browser custom track) |
Alignm length: | 220 |
Alignm identity: | 176 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 37, 31 |
Conread position: | 3-122 |
Cow position: | chr16:48888279-48888398 (view UCSC Genome Browser custom track) |
Alignm length: | 121 |
Alignm identity: | 98 |
Alignm E-value: | 9e-25 |
Alignm gaps (pig, cow): | 16, 31 |
Conread position: | 3-171 |
Cow position: | chr16:22478302-22478470 (view UCSC Genome Browser custom track) |
Alignm length: | 170 |
Alignm identity: | 136 |
Alignm E-value: | 1e-37 |
Alignm gaps (pig, cow): | 36, 30 |
Conread position: | 3-205 |
Cow position: | chr16:11565507-11565305 (view UCSC Genome Browser custom track) |
Alignm length: | 204 |
Alignm identity: | 157 |
Alignm E-value: | 1.99993e-41 |
Alignm gaps (pig, cow): | 36, 30 |
Conread position: | 3-205 |
Cow position: | chr16:23381267-23381469 (view UCSC Genome Browser custom track) |
Alignm length: | 204 |
Alignm identity: | 160 |
Alignm E-value: | 2.94273e-44 |
Alignm gaps (pig, cow): | 36, 30 |
Conread position: | 3-205 |
Cow position: | chr16:30884838-30885039 (view UCSC Genome Browser custom track) |
Alignm length: | 204 |
Alignm identity: | 165 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 36, 29 |
Conread position: | 3-211 |
Cow position: | chr16:46432042-46432250 (view UCSC Genome Browser custom track) |
Alignm length: | 210 |
Alignm identity: | 168 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 36, 29 |
Conread position: | 3-211 |
Cow position: | chr16:51134661-51134455 (view UCSC Genome Browser custom track) |
Alignm length: | 210 |
Alignm identity: | 163 |
Alignm E-value: | 1.99965e-42 |
Alignm gaps (pig, cow): | 36, 30 |
Conread position: | 3-213 |
Cow position: | chr16:40217205-40216995 (view UCSC Genome Browser custom track) |
Alignm length: | 213 |
Alignm identity: | 172 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 36, 30 |
Conread position: | 3-214 |
Cow position: | chr16:12378458-12378661 (view UCSC Genome Browser custom track) |
Alignm length: | 213 |
Alignm identity: | 166 |
Alignm E-value: | 5e-40 |
Alignm gaps (pig, cow): | 36, 30 |
Conread position: | 3-214 |
Cow position: | chr16:43788666-43788448 (view UCSC Genome Browser custom track) |
Alignm length: | 221 |
Alignm identity: | 172 |
Alignm E-value: | 6.00036e-42 |
Alignm gaps (pig, cow): | 36, 31 |
Conread position: | 3-215 |
Cow position: | chr16:46579780-46579992 (view UCSC Genome Browser custom track) |
Alignm length: | 213 |
Alignm identity: | 172 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 3-215 |
Cow position: | chr16:51986902-51986678 (view UCSC Genome Browser custom track) |
Alignm length: | 226 |
Alignm identity: | 176 |
Alignm E-value: | 6.00036e-42 |
Alignm gaps (pig, cow): | 36, 30 |
Conread position: | 3-215 |
Cow position: | chr16:52411658-52411870 (view UCSC Genome Browser custom track) |
Alignm length: | 214 |
Alignm identity: | 165 |
Alignm E-value: | 2.94273e-44 |
Alignm gaps (pig, cow): | 36, 29 |
Conread position: | 3-217 |
Cow position: | chr16:8791308-8791523 (view UCSC Genome Browser custom track) |
Alignm length: | 217 |
Alignm identity: | 172 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 36, 30 |
Conread position: | 3-217 |
Cow position: | chr16:36295346-36295130 (view UCSC Genome Browser custom track) |
Alignm length: | 218 |
Alignm identity: | 176 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 56, 176 |
Conread position: | 3-218 |
Cow position: | chr16:1013664-1013878 (view UCSC Genome Browser custom track) |
Alignm length: | 217 |
Alignm identity: | 167 |
Alignm E-value: | 7.9874e-44 |
Alignm gaps (pig, cow): | 36, 30 |
Conread position: | 3-218 |
Cow position: | chr16:7723327-7723543 (view UCSC Genome Browser custom track) |
Alignm length: | 217 |
Alignm identity: | 167 |
Alignm E-value: | 1.4013e-45 |
Alignm gaps (pig, cow): | 36, 0 |
Conread position: | 3-220 |
Cow position: | chr16:3238723-3238940 (view UCSC Genome Browser custom track) |
Alignm length: | 219 |
Alignm identity: | 177 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 36, 29 |
Conread position: | 3-220 |
Cow position: | chr16:12173762-12173975 (view UCSC Genome Browser custom track) |
Alignm length: | 219 |
Alignm identity: | 172 |
Alignm E-value: | 1.4013e-45 |
Alignm gaps (pig, cow): | 36, 30 |
Conread position: | 3-224 |
Cow position: | chr16:33107722-33107502 (view UCSC Genome Browser custom track) |
Alignm length: | 223 |
Alignm identity: | 173 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 35, 30 |
Conread position: | 3-228 |
Cow position: | chr16:27163401-27163627 (view UCSC Genome Browser custom track) |
Alignm length: | 229 |
Alignm identity: | 184 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 36, 30 |
Conread position: | 3-235 |
Cow position: | chr16:2003227-2003458 (view UCSC Genome Browser custom track) |
Alignm length: | 234 |
Alignm identity: | 178 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 46, 30 |
Conread position: | 3-252 |
Cow position: | chr16:23996605-23996854 (view UCSC Genome Browser custom track) |
Alignm length: | 251 |
Alignm identity: | 125 |
Alignm E-value: | 2e-33 |
Alignm gaps (pig, cow): | 36, 30 |
Conread position: | 4-215 |
Cow position: | chr16:360470-360681 (view UCSC Genome Browser custom track) |
Alignm length: | 213 |
Alignm identity: | 168 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 35, 28 |
Conread position: | 4-216 |
Cow position: | chr16:4387174-4387385 (view UCSC Genome Browser custom track) |
Alignm length: | 215 |
Alignm identity: | 160 |
Alignm E-value: | 3e-36 |
Alignm gaps (pig, cow): | 35, 28 |
Conread position: | 4-220 |
Cow position: | chr16:4536724-4536940 (view UCSC Genome Browser custom track) |
Alignm length: | 218 |
Alignm identity: | 162 |
Alignm E-value: | 2e-39 |
Alignm gaps (pig, cow): | 35, 29 |
Conread position: | 4-225 |
Cow position: | chr16:15873051-15872828 (view UCSC Genome Browser custom track) |
Alignm length: | 225 |
Alignm identity: | 175 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 35, 29 |
Conread position: | 5-205 |
Cow position: | chr16:8203274-8203475 (view UCSC Genome Browser custom track) |
Alignm length: | 204 |
Alignm identity: | 165 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 34, 28 |
Conread position: | 5-216 |
Cow position: | chr16:52698837-52699043 (view UCSC Genome Browser custom track) |
Alignm length: | 213 |
Alignm identity: | 166 |
Alignm E-value: | 7.00649e-43 |
Alignm gaps (pig, cow): | 34, 28 |
Conread position: | 5-221 |
Cow position: | chr16:49566403-49566618 (view UCSC Genome Browser custom track) |
Alignm length: | 218 |
Alignm identity: | 176 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 34, 28 |
Conread position: | 6-110 |
Cow position: | chr16:33890131-33890235 (view UCSC Genome Browser custom track) |
Alignm length: | 105 |
Alignm identity: | 86 |
Alignm E-value: | 8e-23 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 6-111 |
Cow position: | chr16:2250321-2250425 (view UCSC Genome Browser custom track) |
Alignm length: | 106 |
Alignm identity: | 88 |
Alignm E-value: | 3e-23 |
Alignm gaps (pig, cow): | 9, 0 |
Conread position: | 6-131 |
Cow position: | chr16:52491838-52491718 (view UCSC Genome Browser custom track) |
Alignm length: | 127 |
Alignm identity: | 101 |
Alignm E-value: | 7e-22 |
Alignm gaps (pig, cow): | 33, 27 |
Conread position: | 6-137 |
Cow position: | chr16:17165564-17165695 (view UCSC Genome Browser custom track) |
Alignm length: | 132 |
Alignm identity: | 103 |
Alignm E-value: | 4e-26 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 6-137 |
Cow position: | chr16:42931965-42932096 (view UCSC Genome Browser custom track) |
Alignm length: | 133 |
Alignm identity: | 111 |
Alignm E-value: | 2e-31 |
Alignm gaps (pig, cow): | 33, 27 |
Conread position: | 6-168 |
Cow position: | chr16:2359778-2359941 (view UCSC Genome Browser custom track) |
Alignm length: | 165 |
Alignm identity: | 132 |
Alignm E-value: | 3e-35 |
Alignm gaps (pig, cow): | 33, 27 |
Conread position: | 6-168 |
Cow position: | chr16:20741446-20741285 (view UCSC Genome Browser custom track) |
Alignm length: | 164 |
Alignm identity: | 133 |
Alignm E-value: | 1e-36 |
Alignm gaps (pig, cow): | 33, 27 |
Conread position: | 6-211 |
Cow position: | chr16:13018728-13018928 (view UCSC Genome Browser custom track) |
Alignm length: | 207 |
Alignm identity: | 163 |
Alignm E-value: | 6.00036e-42 |
Alignm gaps (pig, cow): | 33, 27 |
Conread position: | 6-212 |
Cow position: | chr16:56681408-56681202 (view UCSC Genome Browser custom track) |
Alignm length: | 208 |
Alignm identity: | 161 |
Alignm E-value: | 2.00386e-43 |
Alignm gaps (pig, cow): | 32, 26 |
Conread position: | 6-213 |
Cow position: | chr16:30797751-30797957 (view UCSC Genome Browser custom track) |
Alignm length: | 209 |
Alignm identity: | 170 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 33, 27 |
Conread position: | 6-213 |
Cow position: | chr16:41676766-41676969 (view UCSC Genome Browser custom track) |
Alignm length: | 209 |
Alignm identity: | 164 |
Alignm E-value: | 7.00649e-43 |
Alignm gaps (pig, cow): | 33, 27 |
Conread position: | 6-214 |
Cow position: | chr16:18807413-18807212 (view UCSC Genome Browser custom track) |
Alignm length: | 210 |
Alignm identity: | 151 |
Alignm E-value: | 4e-28 |
Alignm gaps (pig, cow): | 33, 25 |
Conread position: | 6-214 |
Cow position: | chr16:39482929-39483132 (view UCSC Genome Browser custom track) |
Alignm length: | 210 |
Alignm identity: | 163 |
Alignm E-value: | 2e-40 |
Alignm gaps (pig, cow): | 33, 27 |
Conread position: | 6-215 |
Cow position: | chr16:1777670-1777463 (view UCSC Genome Browser custom track) |
Alignm length: | 211 |
Alignm identity: | 168 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 33, 27 |
Conread position: | 6-215 |
Cow position: | chr16:3118369-3118578 (view UCSC Genome Browser custom track) |
Alignm length: | 211 |
Alignm identity: | 163 |
Alignm E-value: | 7.9874e-44 |
Alignm gaps (pig, cow): | 33, 23 |
Conread position: | 6-215 |
Cow position: | chr16:8175282-8175492 (view UCSC Genome Browser custom track) |
Alignm length: | 211 |
Alignm identity: | 161 |
Alignm E-value: | 7.00649e-43 |
Alignm gaps (pig, cow): | 94, 0 |
Conread position: | 6-215 |
Cow position: | chr16:20570467-20570677 (view UCSC Genome Browser custom track) |
Alignm length: | 213 |
Alignm identity: | 171 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 7, 28 |
Conread position: | 6-215 |
Cow position: | chr16:30005892-30006104 (view UCSC Genome Browser custom track) |
Alignm length: | 214 |
Alignm identity: | 164 |
Alignm E-value: | 1.99993e-41 |
Alignm gaps (pig, cow): | 33, 27 |
Conread position: | 6-216 |
Cow position: | chr16:14471812-14471603 (view UCSC Genome Browser custom track) |
Alignm length: | 212 |
Alignm identity: | 169 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 33, 27 |
Conread position: | 7-174 |
Cow position: | chr16:13644614-13644447 (view UCSC Genome Browser custom track) |
Alignm length: | 169 |
Alignm identity: | 125 |
Alignm E-value: | 1e-27 |
Alignm gaps (pig, cow): | 32, 26 |
Conread position: | 7-206 |
Cow position: | chr16:39704819-39704620 (view UCSC Genome Browser custom track) |
Alignm length: | 201 |
Alignm identity: | 162 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 32, 26 |
Conread position: | 7-214 |
Cow position: | chr16:23479568-23479365 (view UCSC Genome Browser custom track) |
Alignm length: | 209 |
Alignm identity: | 165 |
Alignm E-value: | 2.94273e-44 |
Alignm gaps (pig, cow): | 32, 26 |
Conread position: | 7-214 |
Cow position: | chr16:56266450-56266653 (view UCSC Genome Browser custom track) |
Alignm length: | 209 |
Alignm identity: | 163 |
Alignm E-value: | 6.00036e-42 |
Alignm gaps (pig, cow): | 32, 26 |
Conread position: | 7-215 |
Cow position: | chr16:32117112-32116905 (view UCSC Genome Browser custom track) |
Alignm length: | 210 |
Alignm identity: | 167 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 32, 26 |
Conread position: | 7-216 |
Cow position: | chr16:38296808-38297014 (view UCSC Genome Browser custom track) |
Alignm length: | 212 |
Alignm identity: | 166 |
Alignm E-value: | 7.00649e-43 |
Alignm gaps (pig, cow): | 32, 26 |
Conread position: | 7-216 |
Cow position: | chr16:55115842-55116050 (view UCSC Genome Browser custom track) |
Alignm length: | 211 |
Alignm identity: | 167 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 32, 12 |
Conread position: | 7-217 |
Cow position: | chr16:12407282-12407491 (view UCSC Genome Browser custom track) |
Alignm length: | 212 |
Alignm identity: | 172 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 32, 26 |
Conread position: | 7-219 |
Cow position: | chr16:13169118-13169329 (view UCSC Genome Browser custom track) |
Alignm length: | 214 |
Alignm identity: | 157 |
Alignm E-value: | 1e-35 |
Alignm gaps (pig, cow): | 15, 27 |
Conread position: | 8-191 |
Cow position: | chr16:23459775-23459596 (view UCSC Genome Browser custom track) |
Alignm length: | 185 |
Alignm identity: | 145 |
Alignm E-value: | 1e-36 |
Alignm gaps (pig, cow): | 31, 27 |
Conread position: | 8-213 |
Cow position: | chr16:12643751-12643952 (view UCSC Genome Browser custom track) |
Alignm length: | 208 |
Alignm identity: | 159 |
Alignm E-value: | 4e-37 |
Alignm gaps (pig, cow): | 34, 25 |
Conread position: | 8-214 |
Cow position: | chr16:50870001-50870206 (view UCSC Genome Browser custom track) |
Alignm length: | 208 |
Alignm identity: | 159 |
Alignm E-value: | 2e-40 |
Alignm gaps (pig, cow): | 31, 25 |
Conread position: | 8-218 |
Cow position: | chr16:18471901-18472112 (view UCSC Genome Browser custom track) |
Alignm length: | 213 |
Alignm identity: | 157 |
Alignm E-value: | 1e-36 |
Alignm gaps (pig, cow): | 51, 171 |
Conread position: | 9-211 |
Cow position: | chr16:9532107-9532309 (view UCSC Genome Browser custom track) |
Alignm length: | 204 |
Alignm identity: | 155 |
Alignm E-value: | 2e-39 |
Alignm gaps (pig, cow): | 28, 24 |
Conread position: | 10-213 |
Cow position: | chr16:24192996-24192787 (view UCSC Genome Browser custom track) |
Alignm length: | 212 |
Alignm identity: | 159 |
Alignm E-value: | 8e-34 |
Alignm gaps (pig, cow): | 29, 23 |
Conread position: | 10-214 |
Cow position: | chr16:23907250-23907454 (view UCSC Genome Browser custom track) |
Alignm length: | 205 |
Alignm identity: | 163 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 10-215 |
Cow position: | chr16:30349839-30349635 (view UCSC Genome Browser custom track) |
Alignm length: | 208 |
Alignm identity: | 163 |
Alignm E-value: | 1.99965e-42 |
Alignm gaps (pig, cow): | 29, 22 |
Conread position: | 10-217 |
Cow position: | chr16:30943079-30943294 (view UCSC Genome Browser custom track) |
Alignm length: | 217 |
Alignm identity: | 170 |
Alignm E-value: | 6.00036e-42 |
Alignm gaps (pig, cow): | 43, 23 |
Conread position: | 12-152 |
Cow position: | chr16:55885046-55884907 (view UCSC Genome Browser custom track) |
Alignm length: | 141 |
Alignm identity: | 111 |
Alignm E-value: | 1e-28 |
Alignm gaps (pig, cow): | 132, 0 |
Conread position: | 12-181 |
Cow position: | chr16:20027828-20027659 (view UCSC Genome Browser custom track) |
Alignm length: | 171 |
Alignm identity: | 133 |
Alignm E-value: | 3e-34 |
Alignm gaps (pig, cow): | 27, 21 |
Conread position: | 17-131 |
Cow position: | chr16:42358678-42358792 (view UCSC Genome Browser custom track) |
Alignm length: | 115 |
Alignm identity: | 91 |
Alignm E-value: | 8e-23 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 17-215 |
Cow position: | chr16:11331500-11331695 (view UCSC Genome Browser custom track) |
Alignm length: | 200 |
Alignm identity: | 157 |
Alignm E-value: | 1.99993e-41 |
Alignm gaps (pig, cow): | 22, 16 |
Conread position: | 96-242 |
Cow position: | chr16:3982448-3982594 (view UCSC Genome Browser custom track) |
Alignm length: | 148 |
Alignm identity: | 109 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 101, 82 |
Show alignments to all cow chromosomes.