Cow genome map


           Conread name:
           unkn-SGD602702291.R1
        

               Conread position:
               1-193
               

               Cow position:
               
               

               Alignm length:
               194
               

               Alignm identity:
               160
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               38, 34
               

               Conread position:
               1-198
               

               Cow position:
               
               

               Alignm length:
               201
               

               Alignm identity:
               158
               

               Alignm E-value:
               5.99994e-41
               

               Alignm gaps (pig, cow):
               38, 32
               

               Conread position:
               1-214
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               167
               

               Alignm E-value:
               8.40779e-45
               

               Alignm gaps (pig, cow):
               36, 32
               

               Conread position:
               1-214
               

               Cow position:
               
               

               Alignm length:
               223
               

               Alignm identity:
               180
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               38, 32
               

               Conread position:
               1-214
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               170
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               38, 32
               

               Conread position:
               1-215
               

               Cow position:
               
               

               Alignm length:
               219
               

               Alignm identity:
               170
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               39, 32
               

               Conread position:
               1-215
               

               Cow position:
               
               

               Alignm length:
               225
               

               Alignm identity:
               173
               

               Alignm E-value:
               5e-39
               

               Alignm gaps (pig, cow):
               38, 32
               

               Conread position:
               2-203
               

               Cow position:
               
               

               Alignm length:
               203
               

               Alignm identity:
               158
               

               Alignm E-value:
               6.00036e-42
               

               Alignm gaps (pig, cow):
               37, 30
               

               Conread position:
               2-206
               

               Cow position:
               
               

               Alignm length:
               206
               

               Alignm identity:
               156
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               37, 31
               

               Conread position:
               2-206
               

               Cow position:
               
               

               Alignm length:
               205
               

               Alignm identity:
               164
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 0
               

               Conread position:
               2-215
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               170
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 31
               

               Conread position:
               2-216
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               175
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 31
               

               Conread position:
               2-216
               

               Cow position:
               
               

               Alignm length:
               218
               

               Alignm identity:
               173
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 32
               

               Conread position:
               3-161
               

               Cow position:
               
               

               Alignm length:
               160
               

               Alignm identity:
               122
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               36, 30
               

               Conread position:
               3-203
               

               Cow position:
               
               

               Alignm length:
               202
               

               Alignm identity:
               165
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               30, 45
               

               Conread position:
               3-209
               

               Cow position:
               
               

               Alignm length:
               209
               

               Alignm identity:
               168
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 30
               

               Conread position:
               3-214
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               169
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 30
               

               Conread position:
               3-215
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               169
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 30
               

               Conread position:
               3-215
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               173
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               30, 0
               

               Conread position:
               3-215
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               166
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               36, 30
               

               Conread position:
               3-216
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               178
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 30
               

               Conread position:
               3-216
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               172
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 31
               

               Conread position:
               3-216
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               170
               

               Alignm E-value:
               2.8026e-45
               

               Alignm gaps (pig, cow):
               36, 30
               

               Conread position:
               3-216
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               177
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 30
               

               Conread position:
               3-216
               

               Cow position:
               
               

               Alignm length:
               223
               

               Alignm identity:
               174
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               36, 29
               

               Conread position:
               3-216
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               166
               

               Alignm E-value:
               8.40779e-45
               

               Alignm gaps (pig, cow):
               36, 29
               

               Conread position:
               3-216
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               159
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               36, 29
               

               Conread position:
               3-217
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               168
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               187, 0
               

               Conread position:
               3-218
               

               Cow position:
               
               

               Alignm length:
               217
               

               Alignm identity:
               171
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 30
               

               Conread position:
               3-220
               

               Cow position:
               
               

               Alignm length:
               220
               

               Alignm identity:
               169
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               36, 30
               

               Conread position:
               3-230
               

               Cow position:
               
               

               Alignm length:
               232
               

               Alignm identity:
               171
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               36, 30
               

               Conread position:
               3-232
               

               Cow position:
               
               

               Alignm length:
               231
               

               Alignm identity:
               175
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               36, 30
               

               Conread position:
               5-115
               

               Cow position:
               
               

               Alignm length:
               112
               

               Alignm identity:
               92
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               34, 28
               

               Conread position:
               5-200
               

               Cow position:
               
               

               Alignm length:
               198
               

               Alignm identity:
               147
               

               Alignm E-value:
               8e-34
               

               Alignm gaps (pig, cow):
               26, 34
               

               Conread position:
               5-213
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               172
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 28
               

               Conread position:
               5-214
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               165
               

               Alignm E-value:
               7.9874e-44
               

               Alignm gaps (pig, cow):
               70, 0
               

               Conread position:
               5-215
               

               Cow position:
               
               

               Alignm length:
               212
               

               Alignm identity:
               161
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               33, 26
               

               Conread position:
               6-131
               

               Cow position:
               
               

               Alignm length:
               129
               

               Alignm identity:
               100
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               51, 0
               

               Conread position:
               6-143
               

               Cow position:
               
               

               Alignm length:
               142
               

               Alignm identity:
               107
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               33, 27
               

               Conread position:
               6-198
               

               Cow position:
               
               

               Alignm length:
               200
               

               Alignm identity:
               155
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               33, 27
               

               Conread position:
               6-206
               

               Cow position:
               
               

               Alignm length:
               211
               

               Alignm identity:
               167
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               33, 27
               

               Conread position:
               6-212
               

               Cow position:
               
               

               Alignm length:
               208
               

               Alignm identity:
               170
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 27
               

               Conread position:
               6-215
               

               Cow position:
               
               

               Alignm length:
               211
               

               Alignm identity:
               161
               

               Alignm E-value:
               6.00036e-42
               

               Alignm gaps (pig, cow):
               33, 27
               

               Conread position:
               6-215
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               167
               

               Alignm E-value:
               2.8026e-45
               

               Alignm gaps (pig, cow):
               52, 0
               

               Conread position:
               6-215
               

               Cow position:
               
               

               Alignm length:
               210
               

               Alignm identity:
               162
               

               Alignm E-value:
               2.8026e-45
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               6-216
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               174
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 27
               

               Conread position:
               6-216
               

               Cow position:
               
               

               Alignm length:
               212
               

               Alignm identity:
               168
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 27
               

               Conread position:
               6-218
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               170
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 27
               

               Conread position:
               7-216
               

               Cow position:
               
               

               Alignm length:
               211
               

               Alignm identity:
               168
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 26
               

               Conread position:
               7-217
               

               Cow position:
               
               

               Alignm length:
               212
               

               Alignm identity:
               173
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 25
               

               Conread position:
               7-224
               

               Cow position:
               
               

               Alignm length:
               219
               

               Alignm identity:
               167
               

               Alignm E-value:
               7.9874e-44
               

               Alignm gaps (pig, cow):
               32, 28
               

               Conread position:
               7-225
               

               Cow position:
               
               

               Alignm length:
               220
               

               Alignm identity:
               171
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 26
               

               Conread position:
               8-131
               

               Cow position:
               
               

               Alignm length:
               128
               

               Alignm identity:
               103
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               31, 25
               

               Conread position:
               9-155
               

               Cow position:
               
               

               Alignm length:
               147
               

               Alignm identity:
               119
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               75, 0
               

               Conread position:
               9-215
               

               Cow position:
               
               

               Alignm length:
               211
               

               Alignm identity:
               169
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               30, 24
               

               Conread position:
               10-151
               

               Cow position:
               
               

               Alignm length:
               142
               

               Alignm identity:
               112
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               10-212
               

               Cow position:
               
               

               Alignm length:
               204
               

               Alignm identity:
               164
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               29, 22
               

               Conread position:
               10-214
               

               Cow position:
               
               

               Alignm length:
               206
               

               Alignm identity:
               169
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               29, 23
               

               Conread position:
               10-215
               

               Cow position:
               
               

               Alignm length:
               207
               

               Alignm identity:
               162
               

               Alignm E-value:
               7.9874e-44
               

               Alignm gaps (pig, cow):
               22, 29
               

               Conread position:
               10-220
               

               Cow position:
               
               

               Alignm length:
               220
               

               Alignm identity:
               161
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               29, 23
               

               Conread position:
               15-119
               

               Cow position:
               
               

               Alignm length:
               107
               

               Alignm identity:
               89
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               9, 19
               

               Conread position:
               15-220
               

               Cow position:
               
               

               Alignm length:
               208
               

               Alignm identity:
               159
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               41, 19
               

               Conread position:
               15-225
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               166
               

               Alignm E-value:
               7.9874e-44
               

               Alignm gaps (pig, cow):
               40, 18
               

               Conread position:
               18-216
               

               Cow position:
               
               

               Alignm length:
               210
               

               Alignm identity:
               162
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               66, 0
               

               Conread position:
               23-216
               

               Cow position:
               
               

               Alignm length:
               194
               

               Alignm identity:
               154
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               107, 0
               
Show alignments to all cow chromosomes.