Cow genome map

Conread name: unkn-SGD602702291.R1

Conread position: 1-197
Cow position: chr19:19763991-19763794 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 162
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 32

Conread position: 1-215
Cow position: chr19:30884066-30884286 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 176
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 38, 32

Conread position: 1-216
Cow position: chr19:26253394-26253617 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 178
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 38, 32

Conread position: 2-169
Cow position: chr19:29941872-29942041 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 132
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 37, 31

Conread position: 2-204
Cow position: chr19:15095213-15095415 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 168
Alignm E-value: 0
Alignm gaps (pig, cow): 195, 175

Conread position: 2-215
Cow position: chr19:237012-237226 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 166
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 14, 176

Conread position: 2-215
Cow position: chr19:5536448-5536235 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 172
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 31

Conread position: 2-215
Cow position: chr19:45933086-45933301 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 177
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 31

Conread position: 2-216
Cow position: chr19:18793470-18793683 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 171
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 31

Conread position: 2-218
Cow position: chr19:8208069-8207853 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 175
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 31

Conread position: 2-228
Cow position: chr19:43030220-43030000 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 182
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 31

Conread position: 2-230
Cow position: chr19:49174630-49174386 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 184
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 37, 31

Conread position: 3-131
Cow position: chr19:32801564-32801692 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 104
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 19, 32

Conread position: 3-140
Cow position: chr19:21866419-21866282 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 111
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 36, 30

Conread position: 3-151
Cow position: chr19:36479549-36479394 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 125
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 36, 30

Conread position: 3-198
Cow position: chr19:11921328-11921133 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 157
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 36, 30

Conread position: 3-204
Cow position: chr19:52681376-52681176 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 156
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 36, 28

Conread position: 3-205
Cow position: chr19:12128239-12128038 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 158
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 36, 29

Conread position: 3-205
Cow position: chr19:51045830-51045628 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 158
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 36, 30

Conread position: 3-212
Cow position: chr19:55227454-55227663 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 165
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 36, 30

Conread position: 3-214
Cow position: chr19:2002297-2002097 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 171
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 36, 9

Conread position: 3-214
Cow position: chr19:11033809-11034020 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 172
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 3-214
Cow position: chr19:12010234-12010024 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 162
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 174, 0

Conread position: 3-214
Cow position: chr19:40861373-40861582 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 161
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 36, 19

Conread position: 3-215
Cow position: chr19:3386682-3386462 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 161
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 36, 30

Conread position: 3-215
Cow position: chr19:25556904-25556692 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 168
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 30

Conread position: 3-215
Cow position: chr19:30451669-30451881 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 169
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 32

Conread position: 3-216
Cow position: chr19:136261-136049 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 161
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 189, 70

Conread position: 3-216
Cow position: chr19:1664671-1664464 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 161
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 81, 0

Conread position: 3-216
Cow position: chr19:7569896-7570117 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 168
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 36, 31

Conread position: 3-216
Cow position: chr19:18781838-18781627 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 162
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 36, 30

Conread position: 3-216
Cow position: chr19:49079918-49080129 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 168
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 36, 12

Conread position: 3-219
Cow position: chr19:15012101-15012316 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 176
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 30

Conread position: 3-224
Cow position: chr19:37643068-37643289 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 177
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 30

Conread position: 3-226
Cow position: chr19:2294295-2294517 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 183
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 29

Conread position: 3-233
Cow position: chr19:6389436-6389668 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 186
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 217

Conread position: 4-215
Cow position: chr19:11627411-11627622 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 171
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 29

Conread position: 4-215
Cow position: chr19:22008851-22008636 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 180
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 29

Conread position: 4-216
Cow position: chr19:16769981-16769769 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 168
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 39, 29

Conread position: 4-216
Cow position: chr19:30694595-30694809 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 174
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 31

Conread position: 5-114
Cow position: chr19:50724722-50724831 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 87
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 5-158
Cow position: chr19:50320809-50320657 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 125
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 19, 6

Conread position: 5-180
Cow position: chr19:27422692-27422519 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 139
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 34, 28

Conread position: 5-216
Cow position: chr19:23531770-23531982 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 167
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 34, 28

Conread position: 5-216
Cow position: chr19:40049549-40049760 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 172
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 28

Conread position: 5-243
Cow position: chr19:39640967-39640732 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 179
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 72, 0

Conread position: 6-192
Cow position: chr19:10334558-10334744 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 155
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 27

Conread position: 6-196
Cow position: chr19:24244164-24244354 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 150
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 33, 27

Conread position: 6-198
Cow position: chr19:32344007-32343832 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 153
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 33, 27

Conread position: 6-203
Cow position: chr19:6303923-6304120 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 165
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 25

Conread position: 6-212
Cow position: chr19:47637000-47636806 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 153
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 33, 27

Conread position: 6-213
Cow position: chr19:10520386-10520179 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 168
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 6-213
Cow position: chr19:24604374-24604578 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 164
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 41, 26

Conread position: 6-213
Cow position: chr19:39672969-39673176 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 165
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 27

Conread position: 6-214
Cow position: chr19:16104502-16104710 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 171
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 27

Conread position: 6-216
Cow position: chr19:2787508-2787716 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 159
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 78, 0

Conread position: 6-218
Cow position: chr19:16669677-16669464 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 173
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 27

Conread position: 6-219
Cow position: chr19:19437291-19437504 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 166
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 16, 31

Conread position: 6-235
Cow position: chr19:5379446-5379219 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 174
Alignm E-value: 7.00649e-43
Alignm gaps (pig, cow): 33, 27

Conread position: 7-203
Cow position: chr19:2789511-2789701 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 161
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 32, 26

Conread position: 7-214
Cow position: chr19:32052600-32052804 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 157
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 48, 26

Conread position: 7-215
Cow position: chr19:14233621-14233830 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 170
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 26

Conread position: 7-215
Cow position: chr19:19837574-19837779 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 166
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 32, 26

Conread position: 7-215
Cow position: chr19:22790792-22790998 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 167
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 26

Conread position: 7-216
Cow position: chr19:40656072-40656282 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 175
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 26

Conread position: 7-217
Cow position: chr19:21268755-21268550 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 170
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 26

Conread position: 7-217
Cow position: chr19:23759149-23758939 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 171
Alignm E-value: 0
Alignm gaps (pig, cow): 130, 177

Conread position: 7-222
Cow position: chr19:24140889-24141100 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 176
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 26

Conread position: 8-142
Cow position: chr19:16124503-16124637 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 117
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 31, 25

Conread position: 8-170
Cow position: chr19:55664109-55664271 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 131
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 51, 25

Conread position: 8-203
Cow position: chr19:9307567-9307371 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 163
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 25

Conread position: 9-122
Cow position: chr19:7641755-7641868 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 96
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 29, 24

Conread position: 9-215
Cow position: chr19:47968234-47968445 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 168
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 30, 24

Conread position: 10-170
Cow position: chr19:2168099-2168259 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 122
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 10-198
Cow position: chr19:3549159-3548971 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 141
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 0, 0

Conread position: 10-210
Cow position: chr19:10231344-10231544 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 160
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 29, 23

Conread position: 10-212
Cow position: chr19:5908046-5907846 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 158
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 29, 23

Conread position: 10-215
Cow position: chr19:21219070-21218866 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 159
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 167, 0

Conread position: 10-215
Cow position: chr19:43184366-43184165 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 160
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 29, 5

Conread position: 10-215
Cow position: chr19:46107839-46108042 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 162
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 29, 23

Conread position: 10-227
Cow position: chr19:55190691-55190916 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 173
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 29, 17

Conread position: 13-204
Cow position: chr19:2143162-2142971 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 148
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 26, 20

Conread position: 14-192
Cow position: chr19:8164351-8164175 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 135
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 74, 0

Conread position: 15-243
Cow position: chr19:18633747-18633524 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 169
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 24, 18

Conread position: 20-170
Cow position: chr19:40670421-40670571 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 129
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 27, 13

Conread position: 20-214
Cow position: chr19:22773840-22774035 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 160
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 19, 13

Show alignments to all cow chromosomes.