Cow genome map
Conread name: | unkn-SGD602702291.R1 |
Conread position: | 1-197 |
Cow position: | chr19:19763991-19763794 (view UCSC Genome Browser custom track) |
Alignm length: | 199 |
Alignm identity: | 162 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 38, 32 |
Conread position: | 1-215 |
Cow position: | chr19:30884066-30884286 (view UCSC Genome Browser custom track) |
Alignm length: | 223 |
Alignm identity: | 176 |
Alignm E-value: | 8.40779e-45 |
Alignm gaps (pig, cow): | 38, 32 |
Conread position: | 1-216 |
Cow position: | chr19:26253394-26253617 (view UCSC Genome Browser custom track) |
Alignm length: | 225 |
Alignm identity: | 178 |
Alignm E-value: | 1.4013e-45 |
Alignm gaps (pig, cow): | 38, 32 |
Conread position: | 2-169 |
Cow position: | chr19:29941872-29942041 (view UCSC Genome Browser custom track) |
Alignm length: | 171 |
Alignm identity: | 132 |
Alignm E-value: | 7e-32 |
Alignm gaps (pig, cow): | 37, 31 |
Conread position: | 2-204 |
Cow position: | chr19:15095213-15095415 (view UCSC Genome Browser custom track) |
Alignm length: | 204 |
Alignm identity: | 168 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 195, 175 |
Conread position: | 2-215 |
Cow position: | chr19:237012-237226 (view UCSC Genome Browser custom track) |
Alignm length: | 216 |
Alignm identity: | 166 |
Alignm E-value: | 2.00386e-43 |
Alignm gaps (pig, cow): | 14, 176 |
Conread position: | 2-215 |
Cow position: | chr19:5536448-5536235 (view UCSC Genome Browser custom track) |
Alignm length: | 215 |
Alignm identity: | 172 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 37, 31 |
Conread position: | 2-215 |
Cow position: | chr19:45933086-45933301 (view UCSC Genome Browser custom track) |
Alignm length: | 217 |
Alignm identity: | 177 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 37, 31 |
Conread position: | 2-216 |
Cow position: | chr19:18793470-18793683 (view UCSC Genome Browser custom track) |
Alignm length: | 216 |
Alignm identity: | 171 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 37, 31 |
Conread position: | 2-218 |
Cow position: | chr19:8208069-8207853 (view UCSC Genome Browser custom track) |
Alignm length: | 218 |
Alignm identity: | 175 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 37, 31 |
Conread position: | 2-228 |
Cow position: | chr19:43030220-43030000 (view UCSC Genome Browser custom track) |
Alignm length: | 229 |
Alignm identity: | 182 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 37, 31 |
Conread position: | 2-230 |
Cow position: | chr19:49174630-49174386 (view UCSC Genome Browser custom track) |
Alignm length: | 246 |
Alignm identity: | 184 |
Alignm E-value: | 1e-37 |
Alignm gaps (pig, cow): | 37, 31 |
Conread position: | 3-131 |
Cow position: | chr19:32801564-32801692 (view UCSC Genome Browser custom track) |
Alignm length: | 130 |
Alignm identity: | 104 |
Alignm E-value: | 3e-26 |
Alignm gaps (pig, cow): | 19, 32 |
Conread position: | 3-140 |
Cow position: | chr19:21866419-21866282 (view UCSC Genome Browser custom track) |
Alignm length: | 139 |
Alignm identity: | 111 |
Alignm E-value: | 1e-28 |
Alignm gaps (pig, cow): | 36, 30 |
Conread position: | 3-151 |
Cow position: | chr19:36479549-36479394 (view UCSC Genome Browser custom track) |
Alignm length: | 157 |
Alignm identity: | 125 |
Alignm E-value: | 5e-29 |
Alignm gaps (pig, cow): | 36, 30 |
Conread position: | 3-198 |
Cow position: | chr19:11921328-11921133 (view UCSC Genome Browser custom track) |
Alignm length: | 197 |
Alignm identity: | 157 |
Alignm E-value: | 8.40779e-45 |
Alignm gaps (pig, cow): | 36, 30 |
Conread position: | 3-204 |
Cow position: | chr19:52681376-52681176 (view UCSC Genome Browser custom track) |
Alignm length: | 203 |
Alignm identity: | 156 |
Alignm E-value: | 5e-40 |
Alignm gaps (pig, cow): | 36, 28 |
Conread position: | 3-205 |
Cow position: | chr19:12128239-12128038 (view UCSC Genome Browser custom track) |
Alignm length: | 204 |
Alignm identity: | 158 |
Alignm E-value: | 1.99993e-41 |
Alignm gaps (pig, cow): | 36, 29 |
Conread position: | 3-205 |
Cow position: | chr19:51045830-51045628 (view UCSC Genome Browser custom track) |
Alignm length: | 204 |
Alignm identity: | 158 |
Alignm E-value: | 1.99965e-42 |
Alignm gaps (pig, cow): | 36, 30 |
Conread position: | 3-212 |
Cow position: | chr19:55227454-55227663 (view UCSC Genome Browser custom track) |
Alignm length: | 212 |
Alignm identity: | 165 |
Alignm E-value: | 2.00386e-43 |
Alignm gaps (pig, cow): | 36, 30 |
Conread position: | 3-214 |
Cow position: | chr19:2002297-2002097 (view UCSC Genome Browser custom track) |
Alignm length: | 213 |
Alignm identity: | 171 |
Alignm E-value: | 2.00386e-43 |
Alignm gaps (pig, cow): | 36, 9 |
Conread position: | 3-214 |
Cow position: | chr19:11033809-11034020 (view UCSC Genome Browser custom track) |
Alignm length: | 212 |
Alignm identity: | 172 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 3-214 |
Cow position: | chr19:12010234-12010024 (view UCSC Genome Browser custom track) |
Alignm length: | 212 |
Alignm identity: | 162 |
Alignm E-value: | 2.00386e-43 |
Alignm gaps (pig, cow): | 174, 0 |
Conread position: | 3-214 |
Cow position: | chr19:40861373-40861582 (view UCSC Genome Browser custom track) |
Alignm length: | 213 |
Alignm identity: | 161 |
Alignm E-value: | 5e-39 |
Alignm gaps (pig, cow): | 36, 19 |
Conread position: | 3-215 |
Cow position: | chr19:3386682-3386462 (view UCSC Genome Browser custom track) |
Alignm length: | 223 |
Alignm identity: | 161 |
Alignm E-value: | 5e-30 |
Alignm gaps (pig, cow): | 36, 30 |
Conread position: | 3-215 |
Cow position: | chr19:25556904-25556692 (view UCSC Genome Browser custom track) |
Alignm length: | 214 |
Alignm identity: | 168 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 36, 30 |
Conread position: | 3-215 |
Cow position: | chr19:30451669-30451881 (view UCSC Genome Browser custom track) |
Alignm length: | 214 |
Alignm identity: | 169 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 36, 32 |
Conread position: | 3-216 |
Cow position: | chr19:136261-136049 (view UCSC Genome Browser custom track) |
Alignm length: | 218 |
Alignm identity: | 161 |
Alignm E-value: | 8e-34 |
Alignm gaps (pig, cow): | 189, 70 |
Conread position: | 3-216 |
Cow position: | chr19:1664671-1664464 (view UCSC Genome Browser custom track) |
Alignm length: | 214 |
Alignm identity: | 161 |
Alignm E-value: | 4e-38 |
Alignm gaps (pig, cow): | 81, 0 |
Conread position: | 3-216 |
Cow position: | chr19:7569896-7570117 (view UCSC Genome Browser custom track) |
Alignm length: | 223 |
Alignm identity: | 168 |
Alignm E-value: | 1e-36 |
Alignm gaps (pig, cow): | 36, 31 |
Conread position: | 3-216 |
Cow position: | chr19:18781838-18781627 (view UCSC Genome Browser custom track) |
Alignm length: | 216 |
Alignm identity: | 162 |
Alignm E-value: | 1e-37 |
Alignm gaps (pig, cow): | 36, 30 |
Conread position: | 3-216 |
Cow position: | chr19:49079918-49080129 (view UCSC Genome Browser custom track) |
Alignm length: | 215 |
Alignm identity: | 168 |
Alignm E-value: | 8.40779e-45 |
Alignm gaps (pig, cow): | 36, 12 |
Conread position: | 3-219 |
Cow position: | chr19:15012101-15012316 (view UCSC Genome Browser custom track) |
Alignm length: | 218 |
Alignm identity: | 176 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 36, 30 |
Conread position: | 3-224 |
Cow position: | chr19:37643068-37643289 (view UCSC Genome Browser custom track) |
Alignm length: | 223 |
Alignm identity: | 177 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 36, 30 |
Conread position: | 3-226 |
Cow position: | chr19:2294295-2294517 (view UCSC Genome Browser custom track) |
Alignm length: | 226 |
Alignm identity: | 183 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 36, 29 |
Conread position: | 3-233 |
Cow position: | chr19:6389436-6389668 (view UCSC Genome Browser custom track) |
Alignm length: | 235 |
Alignm identity: | 186 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 47, 217 |
Conread position: | 4-215 |
Cow position: | chr19:11627411-11627622 (view UCSC Genome Browser custom track) |
Alignm length: | 213 |
Alignm identity: | 171 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 35, 29 |
Conread position: | 4-215 |
Cow position: | chr19:22008851-22008636 (view UCSC Genome Browser custom track) |
Alignm length: | 217 |
Alignm identity: | 180 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 35, 29 |
Conread position: | 4-216 |
Cow position: | chr19:16769981-16769769 (view UCSC Genome Browser custom track) |
Alignm length: | 215 |
Alignm identity: | 168 |
Alignm E-value: | 8.40779e-45 |
Alignm gaps (pig, cow): | 39, 29 |
Conread position: | 4-216 |
Cow position: | chr19:30694595-30694809 (view UCSC Genome Browser custom track) |
Alignm length: | 216 |
Alignm identity: | 174 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 13, 31 |
Conread position: | 5-114 |
Cow position: | chr19:50724722-50724831 (view UCSC Genome Browser custom track) |
Alignm length: | 110 |
Alignm identity: | 87 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 5-158 |
Cow position: | chr19:50320809-50320657 (view UCSC Genome Browser custom track) |
Alignm length: | 156 |
Alignm identity: | 125 |
Alignm E-value: | 6e-31 |
Alignm gaps (pig, cow): | 19, 6 |
Conread position: | 5-180 |
Cow position: | chr19:27422692-27422519 (view UCSC Genome Browser custom track) |
Alignm length: | 178 |
Alignm identity: | 139 |
Alignm E-value: | 7e-33 |
Alignm gaps (pig, cow): | 34, 28 |
Conread position: | 5-216 |
Cow position: | chr19:23531770-23531982 (view UCSC Genome Browser custom track) |
Alignm length: | 214 |
Alignm identity: | 167 |
Alignm E-value: | 2.8026e-45 |
Alignm gaps (pig, cow): | 34, 28 |
Conread position: | 5-216 |
Cow position: | chr19:40049549-40049760 (view UCSC Genome Browser custom track) |
Alignm length: | 214 |
Alignm identity: | 172 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 34, 28 |
Conread position: | 5-243 |
Cow position: | chr19:39640967-39640732 (view UCSC Genome Browser custom track) |
Alignm length: | 239 |
Alignm identity: | 179 |
Alignm E-value: | 2.8026e-45 |
Alignm gaps (pig, cow): | 72, 0 |
Conread position: | 6-192 |
Cow position: | chr19:10334558-10334744 (view UCSC Genome Browser custom track) |
Alignm length: | 188 |
Alignm identity: | 155 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 33, 27 |
Conread position: | 6-196 |
Cow position: | chr19:24244164-24244354 (view UCSC Genome Browser custom track) |
Alignm length: | 193 |
Alignm identity: | 150 |
Alignm E-value: | 4e-38 |
Alignm gaps (pig, cow): | 33, 27 |
Conread position: | 6-198 |
Cow position: | chr19:32344007-32343832 (view UCSC Genome Browser custom track) |
Alignm length: | 194 |
Alignm identity: | 153 |
Alignm E-value: | 2e-32 |
Alignm gaps (pig, cow): | 33, 27 |
Conread position: | 6-203 |
Cow position: | chr19:6303923-6304120 (view UCSC Genome Browser custom track) |
Alignm length: | 199 |
Alignm identity: | 165 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 33, 25 |
Conread position: | 6-212 |
Cow position: | chr19:47637000-47636806 (view UCSC Genome Browser custom track) |
Alignm length: | 208 |
Alignm identity: | 153 |
Alignm E-value: | 1e-28 |
Alignm gaps (pig, cow): | 33, 27 |
Conread position: | 6-213 |
Cow position: | chr19:10520386-10520179 (view UCSC Genome Browser custom track) |
Alignm length: | 208 |
Alignm identity: | 168 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 6-213 |
Cow position: | chr19:24604374-24604578 (view UCSC Genome Browser custom track) |
Alignm length: | 209 |
Alignm identity: | 164 |
Alignm E-value: | 2.00386e-43 |
Alignm gaps (pig, cow): | 41, 26 |
Conread position: | 6-213 |
Cow position: | chr19:39672969-39673176 (view UCSC Genome Browser custom track) |
Alignm length: | 209 |
Alignm identity: | 165 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 33, 27 |
Conread position: | 6-214 |
Cow position: | chr19:16104502-16104710 (view UCSC Genome Browser custom track) |
Alignm length: | 210 |
Alignm identity: | 171 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 33, 27 |
Conread position: | 6-216 |
Cow position: | chr19:2787508-2787716 (view UCSC Genome Browser custom track) |
Alignm length: | 211 |
Alignm identity: | 159 |
Alignm E-value: | 5e-40 |
Alignm gaps (pig, cow): | 78, 0 |
Conread position: | 6-218 |
Cow position: | chr19:16669677-16669464 (view UCSC Genome Browser custom track) |
Alignm length: | 215 |
Alignm identity: | 173 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 33, 27 |
Conread position: | 6-219 |
Cow position: | chr19:19437291-19437504 (view UCSC Genome Browser custom track) |
Alignm length: | 216 |
Alignm identity: | 166 |
Alignm E-value: | 1.99965e-42 |
Alignm gaps (pig, cow): | 16, 31 |
Conread position: | 6-235 |
Cow position: | chr19:5379446-5379219 (view UCSC Genome Browser custom track) |
Alignm length: | 231 |
Alignm identity: | 174 |
Alignm E-value: | 7.00649e-43 |
Alignm gaps (pig, cow): | 33, 27 |
Conread position: | 7-203 |
Cow position: | chr19:2789511-2789701 (view UCSC Genome Browser custom track) |
Alignm length: | 198 |
Alignm identity: | 161 |
Alignm E-value: | 2.94273e-44 |
Alignm gaps (pig, cow): | 32, 26 |
Conread position: | 7-214 |
Cow position: | chr19:32052600-32052804 (view UCSC Genome Browser custom track) |
Alignm length: | 209 |
Alignm identity: | 157 |
Alignm E-value: | 1e-36 |
Alignm gaps (pig, cow): | 48, 26 |
Conread position: | 7-215 |
Cow position: | chr19:14233621-14233830 (view UCSC Genome Browser custom track) |
Alignm length: | 211 |
Alignm identity: | 170 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 32, 26 |
Conread position: | 7-215 |
Cow position: | chr19:19837574-19837779 (view UCSC Genome Browser custom track) |
Alignm length: | 210 |
Alignm identity: | 166 |
Alignm E-value: | 8.40779e-45 |
Alignm gaps (pig, cow): | 32, 26 |
Conread position: | 7-215 |
Cow position: | chr19:22790792-22790998 (view UCSC Genome Browser custom track) |
Alignm length: | 210 |
Alignm identity: | 167 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 32, 26 |
Conread position: | 7-216 |
Cow position: | chr19:40656072-40656282 (view UCSC Genome Browser custom track) |
Alignm length: | 212 |
Alignm identity: | 175 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 32, 26 |
Conread position: | 7-217 |
Cow position: | chr19:21268755-21268550 (view UCSC Genome Browser custom track) |
Alignm length: | 212 |
Alignm identity: | 170 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 32, 26 |
Conread position: | 7-217 |
Cow position: | chr19:23759149-23758939 (view UCSC Genome Browser custom track) |
Alignm length: | 212 |
Alignm identity: | 171 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 130, 177 |
Conread position: | 7-222 |
Cow position: | chr19:24140889-24141100 (view UCSC Genome Browser custom track) |
Alignm length: | 217 |
Alignm identity: | 176 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 40, 26 |
Conread position: | 8-142 |
Cow position: | chr19:16124503-16124637 (view UCSC Genome Browser custom track) |
Alignm length: | 136 |
Alignm identity: | 117 |
Alignm E-value: | 1e-35 |
Alignm gaps (pig, cow): | 31, 25 |
Conread position: | 8-170 |
Cow position: | chr19:55664109-55664271 (view UCSC Genome Browser custom track) |
Alignm length: | 165 |
Alignm identity: | 131 |
Alignm E-value: | 8e-34 |
Alignm gaps (pig, cow): | 51, 25 |
Conread position: | 8-203 |
Cow position: | chr19:9307567-9307371 (view UCSC Genome Browser custom track) |
Alignm length: | 198 |
Alignm identity: | 163 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 31, 25 |
Conread position: | 9-122 |
Cow position: | chr19:7641755-7641868 (view UCSC Genome Browser custom track) |
Alignm length: | 115 |
Alignm identity: | 96 |
Alignm E-value: | 1e-25 |
Alignm gaps (pig, cow): | 29, 24 |
Conread position: | 9-215 |
Cow position: | chr19:47968234-47968445 (view UCSC Genome Browser custom track) |
Alignm length: | 213 |
Alignm identity: | 168 |
Alignm E-value: | 8.40779e-45 |
Alignm gaps (pig, cow): | 30, 24 |
Conread position: | 10-170 |
Cow position: | chr19:2168099-2168259 (view UCSC Genome Browser custom track) |
Alignm length: | 161 |
Alignm identity: | 122 |
Alignm E-value: | 2e-30 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 10-198 |
Cow position: | chr19:3549159-3548971 (view UCSC Genome Browser custom track) |
Alignm length: | 189 |
Alignm identity: | 141 |
Alignm E-value: | 3e-35 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 10-210 |
Cow position: | chr19:10231344-10231544 (view UCSC Genome Browser custom track) |
Alignm length: | 202 |
Alignm identity: | 160 |
Alignm E-value: | 2.8026e-45 |
Alignm gaps (pig, cow): | 29, 23 |
Conread position: | 10-212 |
Cow position: | chr19:5908046-5907846 (view UCSC Genome Browser custom track) |
Alignm length: | 204 |
Alignm identity: | 158 |
Alignm E-value: | 2e-40 |
Alignm gaps (pig, cow): | 29, 23 |
Conread position: | 10-215 |
Cow position: | chr19:21219070-21218866 (view UCSC Genome Browser custom track) |
Alignm length: | 206 |
Alignm identity: | 159 |
Alignm E-value: | 2.00386e-43 |
Alignm gaps (pig, cow): | 167, 0 |
Conread position: | 10-215 |
Cow position: | chr19:43184366-43184165 (view UCSC Genome Browser custom track) |
Alignm length: | 208 |
Alignm identity: | 160 |
Alignm E-value: | 1e-37 |
Alignm gaps (pig, cow): | 29, 5 |
Conread position: | 10-215 |
Cow position: | chr19:46107839-46108042 (view UCSC Genome Browser custom track) |
Alignm length: | 207 |
Alignm identity: | 162 |
Alignm E-value: | 2.00386e-43 |
Alignm gaps (pig, cow): | 29, 23 |
Conread position: | 10-227 |
Cow position: | chr19:55190691-55190916 (view UCSC Genome Browser custom track) |
Alignm length: | 228 |
Alignm identity: | 173 |
Alignm E-value: | 2e-39 |
Alignm gaps (pig, cow): | 29, 17 |
Conread position: | 13-204 |
Cow position: | chr19:2143162-2142971 (view UCSC Genome Browser custom track) |
Alignm length: | 193 |
Alignm identity: | 148 |
Alignm E-value: | 4e-38 |
Alignm gaps (pig, cow): | 26, 20 |
Conread position: | 14-192 |
Cow position: | chr19:8164351-8164175 (view UCSC Genome Browser custom track) |
Alignm length: | 179 |
Alignm identity: | 135 |
Alignm E-value: | 2e-32 |
Alignm gaps (pig, cow): | 74, 0 |
Conread position: | 15-243 |
Cow position: | chr19:18633747-18633524 (view UCSC Genome Browser custom track) |
Alignm length: | 231 |
Alignm identity: | 169 |
Alignm E-value: | 3e-35 |
Alignm gaps (pig, cow): | 24, 18 |
Conread position: | 20-170 |
Cow position: | chr19:40670421-40670571 (view UCSC Genome Browser custom track) |
Alignm length: | 152 |
Alignm identity: | 129 |
Alignm E-value: | 2e-39 |
Alignm gaps (pig, cow): | 27, 13 |
Conread position: | 20-214 |
Cow position: | chr19:22773840-22774035 (view UCSC Genome Browser custom track) |
Alignm length: | 198 |
Alignm identity: | 160 |
Alignm E-value: | 2.94273e-44 |
Alignm gaps (pig, cow): | 19, 13 |
Show alignments to all cow chromosomes.