Cow genome map

Conread name: unkn-SGD602702291.R1

Conread position: 1-168
Cow position:
Alignm length: 170
Alignm identity: 130
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 38, 32

Conread position: 1-211
Cow position:
Alignm length: 213
Alignm identity: 160
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 38, 32

Conread position: 1-214
Cow position:
Alignm length: 221
Alignm identity: 177
Alignm E-value: 0
Alignm gaps (pig, cow): 170, 32

Conread position: 1-215
Cow position:
Alignm length: 216
Alignm identity: 181
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 33

Conread position: 1-229
Cow position:
Alignm length: 231
Alignm identity: 182
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 178

Conread position: 1-229
Cow position:
Alignm length: 231
Alignm identity: 185
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 31

Conread position: 2-213
Cow position:
Alignm length: 213
Alignm identity: 166
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 31

Conread position: 2-214
Cow position:
Alignm length: 214
Alignm identity: 166
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 37, 31

Conread position: 2-214
Cow position:
Alignm length: 213
Alignm identity: 165
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 0

Conread position: 2-215
Cow position:
Alignm length: 215
Alignm identity: 165
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 37, 31

Conread position: 2-215
Cow position:
Alignm length: 215
Alignm identity: 179
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 31

Conread position: 2-215
Cow position:
Alignm length: 215
Alignm identity: 170
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 31

Conread position: 2-215
Cow position:
Alignm length: 215
Alignm identity: 155
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 37, 31

Conread position: 2-215
Cow position:
Alignm length: 215
Alignm identity: 167
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 37, 31

Conread position: 2-216
Cow position:
Alignm length: 217
Alignm identity: 176
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 56

Conread position: 2-219
Cow position:
Alignm length: 219
Alignm identity: 177
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 31

Conread position: 2-225
Cow position:
Alignm length: 225
Alignm identity: 162
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 37, 27

Conread position: 3-111
Cow position:
Alignm length: 110
Alignm identity: 92
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 36, 30

Conread position: 3-121
Cow position:
Alignm length: 120
Alignm identity: 102
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 36, 30

Conread position: 3-124
Cow position:
Alignm length: 123
Alignm identity: 98
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 36, 30

Conread position: 3-131
Cow position:
Alignm length: 130
Alignm identity: 103
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 36, 30

Conread position: 3-138
Cow position:
Alignm length: 138
Alignm identity: 108
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 13, 31

Conread position: 3-180
Cow position:
Alignm length: 178
Alignm identity: 139
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 62, 0

Conread position: 3-191
Cow position:
Alignm length: 197
Alignm identity: 156
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 36, 30

Conread position: 3-203
Cow position:
Alignm length: 201
Alignm identity: 152
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 73, 0

Conread position: 3-205
Cow position:
Alignm length: 204
Alignm identity: 160
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 36, 30

Conread position: 3-212
Cow position:
Alignm length: 211
Alignm identity: 154
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 28, 36

Conread position: 3-213
Cow position:
Alignm length: 212
Alignm identity: 161
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 204, 0

Conread position: 3-213
Cow position:
Alignm length: 211
Alignm identity: 163
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 148, 0

Conread position: 3-214
Cow position:
Alignm length: 213
Alignm identity: 167
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 30

Conread position: 3-215
Cow position:
Alignm length: 214
Alignm identity: 170
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 30

Conread position: 3-215
Cow position:
Alignm length: 214
Alignm identity: 175
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 30

Conread position: 3-215
Cow position:
Alignm length: 214
Alignm identity: 170
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 32

Conread position: 3-215
Cow position:
Alignm length: 220
Alignm identity: 171
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 36, 30

Conread position: 3-216
Cow position:
Alignm length: 215
Alignm identity: 177
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 30

Conread position: 3-216
Cow position:
Alignm length: 216
Alignm identity: 174
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 31

Conread position: 3-216
Cow position:
Alignm length: 215
Alignm identity: 173
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 30

Conread position: 3-216
Cow position:
Alignm length: 215
Alignm identity: 168
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 31

Conread position: 3-217
Cow position:
Alignm length: 216
Alignm identity: 168
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 36, 30

Conread position: 3-224
Cow position:
Alignm length: 224
Alignm identity: 174
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 30

Conread position: 3-227
Cow position:
Alignm length: 226
Alignm identity: 180
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 30

Conread position: 4-212
Cow position:
Alignm length: 209
Alignm identity: 167
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 5-132
Cow position:
Alignm length: 129
Alignm identity: 104
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 34, 28

Conread position: 5-215
Cow position:
Alignm length: 213
Alignm identity: 174
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 27

Conread position: 5-216
Cow position:
Alignm length: 213
Alignm identity: 171
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 28

Conread position: 5-237
Cow position:
Alignm length: 235
Alignm identity: 183
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 28

Conread position: 6-205
Cow position:
Alignm length: 201
Alignm identity: 165
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 27

Conread position: 6-205
Cow position:
Alignm length: 201
Alignm identity: 164
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 26

Conread position: 6-213
Cow position:
Alignm length: 212
Alignm identity: 161
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 33, 27

Conread position: 6-214
Cow position:
Alignm length: 210
Alignm identity: 164
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 33, 27

Conread position: 6-215
Cow position:
Alignm length: 211
Alignm identity: 163
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 33, 27

Conread position: 6-215
Cow position:
Alignm length: 212
Alignm identity: 181
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 27

Conread position: 6-216
Cow position:
Alignm length: 211
Alignm identity: 166
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 91, 0

Conread position: 6-217
Cow position:
Alignm length: 213
Alignm identity: 169
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 27

Conread position: 6-219
Cow position:
Alignm length: 215
Alignm identity: 168
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 27

Conread position: 7-133
Cow position:
Alignm length: 128
Alignm identity: 107
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 39, 26

Conread position: 7-212
Cow position:
Alignm length: 206
Alignm identity: 167
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 7-213
Cow position:
Alignm length: 208
Alignm identity: 170
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 24

Conread position: 7-213
Cow position:
Alignm length: 215
Alignm identity: 179
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 26

Conread position: 7-216
Cow position:
Alignm length: 212
Alignm identity: 164
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 166, 73

Conread position: 7-216
Cow position:
Alignm length: 220
Alignm identity: 168
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 12, 29

Conread position: 7-216
Cow position:
Alignm length: 212
Alignm identity: 172
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 26

Conread position: 7-217
Cow position:
Alignm length: 213
Alignm identity: 172
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 26

Conread position: 7-219
Cow position:
Alignm length: 213
Alignm identity: 159
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 0, 0

Conread position: 7-236
Cow position:
Alignm length: 232
Alignm identity: 187
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 26

Conread position: 8-124
Cow position:
Alignm length: 122
Alignm identity: 100
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 57, 0

Conread position: 9-174
Cow position:
Alignm length: 167
Alignm identity: 140
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 30, 24

Conread position: 9-196
Cow position:
Alignm length: 189
Alignm identity: 153
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 30, 23

Conread position: 9-215
Cow position:
Alignm length: 212
Alignm identity: 175
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 24

Conread position: 10-170
Cow position:
Alignm length: 162
Alignm identity: 130
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 12, 24

Conread position: 10-198
Cow position:
Alignm length: 199
Alignm identity: 162
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 29, 21

Conread position: 10-205
Cow position:
Alignm length: 196
Alignm identity: 144
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 0, 0

Conread position: 10-216
Cow position:
Alignm length: 209
Alignm identity: 174
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 23

Conread position: 10-221
Cow position:
Alignm length: 224
Alignm identity: 178
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 14, 24

Conread position: 10-243
Cow position:
Alignm length: 236
Alignm identity: 180
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 24

Conread position: 11-215
Cow position:
Alignm length: 206
Alignm identity: 170
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 22

Conread position: 19-220
Cow position:
Alignm length: 211
Alignm identity: 161
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 20, 14

Show alignments to all cow chromosomes.