Cow genome map
| Conread name: | unkn-SGD602702291.R1 |
| Conread position: | 1-117 |
| Cow position: | chr22:32069304-32069190 (view UCSC Genome Browser custom track) |
| Alignm length: | 118 |
| Alignm identity: | 96 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 46, 102 |
| Conread position: | 1-213 |
| Cow position: | chr22:6549081-6548876 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 166 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 1-213 |
| Cow position: | chr22:43511327-43511539 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 167 |
| Alignm E-value: | 7.00649e-44 |
| Alignm gaps (pig, cow): | 38, 32 |
| Conread position: | 1-215 |
| Cow position: | chr22:35785550-35785761 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 164 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 38, 32 |
| Conread position: | 1-221 |
| Cow position: | chr22:16052233-16052020 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 179 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 32 |
| Conread position: | 2-214 |
| Cow position: | chr22:10946808-10947017 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 168 |
| Alignm E-value: | 7.00649e-45 |
| Alignm gaps (pig, cow): | 37, 31 |
| Conread position: | 2-215 |
| Cow position: | chr22:29294757-29294968 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 173 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 29 |
| Conread position: | 2-217 |
| Cow position: | chr22:18901043-18901258 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 171 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 31 |
| Conread position: | 2-232 |
| Cow position: | chr22:30646048-30645822 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 176 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 37, 31 |
| Conread position: | 3-159 |
| Cow position: | chr22:19155656-19155814 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 127 |
| Alignm E-value: | 8e-35 |
| Alignm gaps (pig, cow): | 85, 0 |
| Conread position: | 3-170 |
| Cow position: | chr22:21214019-21214184 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 136 |
| Alignm E-value: | 9e-37 |
| Alignm gaps (pig, cow): | 36, 29 |
| Conread position: | 3-193 |
| Cow position: | chr22:9542415-9542604 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 152 |
| Alignm E-value: | 9e-37 |
| Alignm gaps (pig, cow): | 43, 30 |
| Conread position: | 3-210 |
| Cow position: | chr22:31918125-31917920 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 171 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 30 |
| Conread position: | 3-214 |
| Cow position: | chr22:18677245-18677455 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 169 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 30 |
| Conread position: | 3-214 |
| Cow position: | chr22:22978629-22978839 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 161 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 36, 30 |
| Conread position: | 3-215 |
| Cow position: | chr22:7532078-7532302 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 176 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 36, 29 |
| Conread position: | 3-215 |
| Cow position: | chr22:34399294-34399082 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 171 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 30 |
| Conread position: | 3-216 |
| Cow position: | chr22:12035034-12035246 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 171 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 30 |
| Conread position: | 3-216 |
| Cow position: | chr22:16722834-16723049 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 170 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 3-216 |
| Cow position: | chr22:39324205-39323993 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 172 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 30 |
| Conread position: | 3-218 |
| Cow position: | chr22:24923473-24923265 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 172 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 36, 30 |
| Conread position: | 3-225 |
| Cow position: | chr22:16892663-16892891 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 175 |
| Alignm E-value: | 7.00649e-44 |
| Alignm gaps (pig, cow): | 152, 0 |
| Conread position: | 5-205 |
| Cow position: | chr22:11055761-11055961 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 149 |
| Alignm E-value: | 8e-35 |
| Alignm gaps (pig, cow): | 32, 28 |
| Conread position: | 5-214 |
| Cow position: | chr22:37029878-37030098 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 173 |
| Alignm E-value: | 7.00649e-44 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 5-215 |
| Cow position: | chr22:9405082-9405279 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 165 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 34, 28 |
| Conread position: | 5-215 |
| Cow position: | chr22:33731577-33731787 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 168 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 34, 28 |
| Conread position: | 6-195 |
| Cow position: | chr22:35773014-35772825 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 152 |
| Alignm E-value: | 5.99756e-43 |
| Alignm gaps (pig, cow): | 33, 27 |
| Conread position: | 6-203 |
| Cow position: | chr22:27609758-27609945 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 155 |
| Alignm E-value: | 7e-34 |
| Alignm gaps (pig, cow): | 20, 28 |
| Conread position: | 6-205 |
| Cow position: | chr22:10729617-10729816 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 165 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 27 |
| Conread position: | 6-212 |
| Cow position: | chr22:25325198-25325404 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 158 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 33, 27 |
| Conread position: | 6-216 |
| Cow position: | chr22:25742134-25742345 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 171 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 27 |
| Conread position: | 6-216 |
| Cow position: | chr22:43630355-43630144 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 167 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 33, 27 |
| Conread position: | 7-124 |
| Cow position: | chr22:25986425-25986542 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 93 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 32, 25 |
| Conread position: | 7-140 |
| Cow position: | chr22:38916125-38916255 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 113 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 32, 10 |
| Conread position: | 7-170 |
| Cow position: | chr22:43401535-43401696 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 131 |
| Alignm E-value: | 7e-34 |
| Alignm gaps (pig, cow): | 38, 27 |
| Conread position: | 7-193 |
| Cow position: | chr22:18355624-18355447 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 143 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 7-204 |
| Cow position: | chr22:44141353-44141147 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 162 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 32, 26 |
| Conread position: | 7-214 |
| Cow position: | chr22:4737670-4737462 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 175 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 26 |
| Conread position: | 7-215 |
| Cow position: | chr22:42438982-42438775 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 165 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 32, 26 |
| Conread position: | 7-216 |
| Cow position: | chr22:5324486-5324273 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 172 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 26 |
| Conread position: | 7-216 |
| Cow position: | chr22:45379282-45379491 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 156 |
| Alignm E-value: | 8e-35 |
| Alignm gaps (pig, cow): | 32, 26 |
| Conread position: | 7-217 |
| Cow position: | chr22:29949083-29948866 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 179 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 26 |
| Conread position: | 7-218 |
| Cow position: | chr22:25483630-25483421 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 176 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 26 |
| Conread position: | 7-228 |
| Cow position: | chr22:12941495-12941715 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 175 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 26 |
| Conread position: | 8-136 |
| Cow position: | chr22:18844766-18844895 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 107 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 31, 24 |
| Conread position: | 8-168 |
| Cow position: | chr22:33776196-33776355 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 131 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 48, 25 |
| Conread position: | 9-137 |
| Cow position: | chr22:19295470-19295598 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 108 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 30, 23 |
| Conread position: | 9-167 |
| Cow position: | chr22:3476485-3476644 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 129 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 30, 24 |
| Conread position: | 10-198 |
| Cow position: | chr22:26547502-26547689 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 139 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 29, 22 |
| Conread position: | 10-211 |
| Cow position: | chr22:37794069-37793859 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 163 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 41, 26 |
| Conread position: | 10-222 |
| Cow position: | chr22:22872563-22872770 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 154 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 187, 5 |
| Conread position: | 11-195 |
| Cow position: | chr22:2354681-2354863 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 143 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 28, 22 |
| Conread position: | 19-153 |
| Cow position: | chr22:45333817-45333951 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 116 |
| Alignm E-value: | 8e-35 |
| Alignm gaps (pig, cow): | 20, 14 |
Show alignments to all cow chromosomes.