Cow genome map


           Conread name:
           unkn-SGD602702291.R1
        

               Conread position:
               1-117
               

               Cow position:
               
               

               Alignm length:
               118
               

               Alignm identity:
               96
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               46, 102
               

               Conread position:
               1-213
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               166
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               32, 0
               

               Conread position:
               1-213
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               167
               

               Alignm E-value:
               7.00649e-44
               

               Alignm gaps (pig, cow):
               38, 32
               

               Conread position:
               1-215
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               164
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               38, 32
               

               Conread position:
               1-221
               

               Cow position:
               
               

               Alignm length:
               222
               

               Alignm identity:
               179
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               38, 32
               

               Conread position:
               2-214
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               168
               

               Alignm E-value:
               7.00649e-45
               

               Alignm gaps (pig, cow):
               37, 31
               

               Conread position:
               2-215
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               173
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 29
               

               Conread position:
               2-217
               

               Cow position:
               
               

               Alignm length:
               217
               

               Alignm identity:
               171
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 31
               

               Conread position:
               2-232
               

               Cow position:
               
               

               Alignm length:
               233
               

               Alignm identity:
               176
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               37, 31
               

               Conread position:
               3-159
               

               Cow position:
               
               

               Alignm length:
               159
               

               Alignm identity:
               127
               

               Alignm E-value:
               8e-35
               

               Alignm gaps (pig, cow):
               85, 0
               

               Conread position:
               3-170
               

               Cow position:
               
               

               Alignm length:
               169
               

               Alignm identity:
               136
               

               Alignm E-value:
               9e-37
               

               Alignm gaps (pig, cow):
               36, 29
               

               Conread position:
               3-193
               

               Cow position:
               
               

               Alignm length:
               194
               

               Alignm identity:
               152
               

               Alignm E-value:
               9e-37
               

               Alignm gaps (pig, cow):
               43, 30
               

               Conread position:
               3-210
               

               Cow position:
               
               

               Alignm length:
               209
               

               Alignm identity:
               171
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 30
               

               Conread position:
               3-214
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               169
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 30
               

               Conread position:
               3-214
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               161
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               36, 30
               

               Conread position:
               3-215
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               176
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               36, 29
               

               Conread position:
               3-215
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               171
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 30
               

               Conread position:
               3-216
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               171
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 30
               

               Conread position:
               3-216
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               170
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               56, 0
               

               Conread position:
               3-216
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               172
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 30
               

               Conread position:
               3-218
               

               Cow position:
               
               

               Alignm length:
               217
               

               Alignm identity:
               172
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               36, 30
               

               Conread position:
               3-225
               

               Cow position:
               
               

               Alignm length:
               229
               

               Alignm identity:
               175
               

               Alignm E-value:
               7.00649e-44
               

               Alignm gaps (pig, cow):
               152, 0
               

               Conread position:
               5-205
               

               Cow position:
               
               

               Alignm length:
               202
               

               Alignm identity:
               149
               

               Alignm E-value:
               8e-35
               

               Alignm gaps (pig, cow):
               32, 28
               

               Conread position:
               5-214
               

               Cow position:
               
               

               Alignm length:
               221
               

               Alignm identity:
               173
               

               Alignm E-value:
               7.00649e-44
               

               Alignm gaps (pig, cow):
               50, 0
               

               Conread position:
               5-215
               

               Cow position:
               
               

               Alignm length:
               212
               

               Alignm identity:
               165
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               34, 28
               

               Conread position:
               5-215
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               168
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               34, 28
               

               Conread position:
               6-195
               

               Cow position:
               
               

               Alignm length:
               191
               

               Alignm identity:
               152
               

               Alignm E-value:
               5.99756e-43
               

               Alignm gaps (pig, cow):
               33, 27
               

               Conread position:
               6-203
               

               Cow position:
               
               

               Alignm length:
               200
               

               Alignm identity:
               155
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               20, 28
               

               Conread position:
               6-205
               

               Cow position:
               
               

               Alignm length:
               201
               

               Alignm identity:
               165
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 27
               

               Conread position:
               6-212
               

               Cow position:
               
               

               Alignm length:
               208
               

               Alignm identity:
               158
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               33, 27
               

               Conread position:
               6-216
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               171
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 27
               

               Conread position:
               6-216
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               167
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               33, 27
               

               Conread position:
               7-124
               

               Cow position:
               
               

               Alignm length:
               119
               

               Alignm identity:
               93
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               32, 25
               

               Conread position:
               7-140
               

               Cow position:
               
               

               Alignm length:
               135
               

               Alignm identity:
               113
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               32, 10
               

               Conread position:
               7-170
               

               Cow position:
               
               

               Alignm length:
               165
               

               Alignm identity:
               131
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               38, 27
               

               Conread position:
               7-193
               

               Cow position:
               
               

               Alignm length:
               187
               

               Alignm identity:
               143
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               55, 0
               

               Conread position:
               7-204
               

               Cow position:
               
               

               Alignm length:
               208
               

               Alignm identity:
               162
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               32, 26
               

               Conread position:
               7-214
               

               Cow position:
               
               

               Alignm length:
               210
               

               Alignm identity:
               175
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 26
               

               Conread position:
               7-215
               

               Cow position:
               
               

               Alignm length:
               212
               

               Alignm identity:
               165
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               32, 26
               

               Conread position:
               7-216
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               172
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 26
               

               Conread position:
               7-216
               

               Cow position:
               
               

               Alignm length:
               212
               

               Alignm identity:
               156
               

               Alignm E-value:
               8e-35
               

               Alignm gaps (pig, cow):
               32, 26
               

               Conread position:
               7-217
               

               Cow position:
               
               

               Alignm length:
               221
               

               Alignm identity:
               179
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 26
               

               Conread position:
               7-218
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               176
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 26
               

               Conread position:
               7-228
               

               Cow position:
               
               

               Alignm length:
               223
               

               Alignm identity:
               175
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 26
               

               Conread position:
               8-136
               

               Cow position:
               
               

               Alignm length:
               131
               

               Alignm identity:
               107
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               31, 24
               

               Conread position:
               8-168
               

               Cow position:
               
               

               Alignm length:
               163
               

               Alignm identity:
               131
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               48, 25
               

               Conread position:
               9-137
               

               Cow position:
               
               

               Alignm length:
               130
               

               Alignm identity:
               108
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               30, 23
               

               Conread position:
               9-167
               

               Cow position:
               
               

               Alignm length:
               161
               

               Alignm identity:
               129
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               30, 24
               

               Conread position:
               10-198
               

               Cow position:
               
               

               Alignm length:
               190
               

               Alignm identity:
               139
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               29, 22
               

               Conread position:
               10-211
               

               Cow position:
               
               

               Alignm length:
               212
               

               Alignm identity:
               163
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               41, 26
               

               Conread position:
               10-222
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               154
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               187, 5
               

               Conread position:
               11-195
               

               Cow position:
               
               

               Alignm length:
               186
               

               Alignm identity:
               143
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               28, 22
               

               Conread position:
               19-153
               

               Cow position:
               
               

               Alignm length:
               136
               

               Alignm identity:
               116
               

               Alignm E-value:
               8e-35
               

               Alignm gaps (pig, cow):
               20, 14
               
Show alignments to all cow chromosomes.