Cow genome map
Conread name: | unkn-SGD602702291.R1 |
Conread position: | 1-114 |
Cow position: | chr23:26944145-26944258 (view UCSC Genome Browser custom track) |
Alignm length: | 115 |
Alignm identity: | 95 |
Alignm E-value: | 7e-25 |
Alignm gaps (pig, cow): | 38, 32 |
Conread position: | 1-132 |
Cow position: | chr23:9535461-9535591 (view UCSC Genome Browser custom track) |
Alignm length: | 132 |
Alignm identity: | 101 |
Alignm E-value: | 2e-23 |
Alignm gaps (pig, cow): | 110, 0 |
Conread position: | 1-132 |
Cow position: | chr23:33331283-33331414 (view UCSC Genome Browser custom track) |
Alignm length: | 133 |
Alignm identity: | 107 |
Alignm E-value: | 9e-28 |
Alignm gaps (pig, cow): | 37, 32 |
Conread position: | 1-181 |
Cow position: | chr23:34928820-34928640 (view UCSC Genome Browser custom track) |
Alignm length: | 182 |
Alignm identity: | 145 |
Alignm E-value: | 9.99995e-41 |
Alignm gaps (pig, cow): | 38, 32 |
Conread position: | 1-214 |
Cow position: | chr23:26158898-26159107 (view UCSC Genome Browser custom track) |
Alignm length: | 215 |
Alignm identity: | 166 |
Alignm E-value: | 4.99983e-42 |
Alignm gaps (pig, cow): | 46, 20 |
Conread position: | 2-94 |
Cow position: | chr23:26183615-26183707 (view UCSC Genome Browser custom track) |
Alignm length: | 94 |
Alignm identity: | 81 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 37, 31 |
Conread position: | 2-119 |
Cow position: | chr23:38847458-38847341 (view UCSC Genome Browser custom track) |
Alignm length: | 119 |
Alignm identity: | 96 |
Alignm E-value: | 6e-24 |
Alignm gaps (pig, cow): | 37, 31 |
Conread position: | 2-125 |
Cow position: | chr23:28712093-28712212 (view UCSC Genome Browser custom track) |
Alignm length: | 124 |
Alignm identity: | 104 |
Alignm E-value: | 3e-28 |
Alignm gaps (pig, cow): | 31, 0 |
Conread position: | 2-173 |
Cow position: | chr23:39214970-39215140 (view UCSC Genome Browser custom track) |
Alignm length: | 173 |
Alignm identity: | 132 |
Alignm E-value: | 1e-31 |
Alignm gaps (pig, cow): | 37, 31 |
Conread position: | 2-215 |
Cow position: | chr23:13355834-13356047 (view UCSC Genome Browser custom track) |
Alignm length: | 215 |
Alignm identity: | 175 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 37, 170 |
Conread position: | 2-215 |
Cow position: | chr23:30629164-30628955 (view UCSC Genome Browser custom track) |
Alignm length: | 215 |
Alignm identity: | 166 |
Alignm E-value: | 1.99965e-42 |
Alignm gaps (pig, cow): | 37, 31 |
Conread position: | 2-215 |
Cow position: | chr23:32048501-32048289 (view UCSC Genome Browser custom track) |
Alignm length: | 215 |
Alignm identity: | 164 |
Alignm E-value: | 4.99983e-42 |
Alignm gaps (pig, cow): | 37, 31 |
Conread position: | 2-216 |
Cow position: | chr23:15030138-15030351 (view UCSC Genome Browser custom track) |
Alignm length: | 216 |
Alignm identity: | 171 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 37, 31 |
Conread position: | 2-223 |
Cow position: | chr23:12356525-12356750 (view UCSC Genome Browser custom track) |
Alignm length: | 227 |
Alignm identity: | 164 |
Alignm E-value: | 6e-34 |
Alignm gaps (pig, cow): | 37, 31 |
Conread position: | 3-155 |
Cow position: | chr23:11072087-11072240 (view UCSC Genome Browser custom track) |
Alignm length: | 155 |
Alignm identity: | 124 |
Alignm E-value: | 2e-32 |
Alignm gaps (pig, cow): | 36, 30 |
Conread position: | 3-200 |
Cow position: | chr23:40816856-40817043 (view UCSC Genome Browser custom track) |
Alignm length: | 199 |
Alignm identity: | 157 |
Alignm E-value: | 9e-38 |
Alignm gaps (pig, cow): | 36, 30 |
Conread position: | 3-203 |
Cow position: | chr23:18741478-18741678 (view UCSC Genome Browser custom track) |
Alignm length: | 202 |
Alignm identity: | 154 |
Alignm E-value: | 1e-39 |
Alignm gaps (pig, cow): | 36, 30 |
Conread position: | 3-205 |
Cow position: | chr23:30040806-30040603 (view UCSC Genome Browser custom track) |
Alignm length: | 205 |
Alignm identity: | 167 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 36, 30 |
Conread position: | 3-213 |
Cow position: | chr23:22296275-22296483 (view UCSC Genome Browser custom track) |
Alignm length: | 212 |
Alignm identity: | 170 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 36, 30 |
Conread position: | 3-214 |
Cow position: | chr23:30653078-30652867 (view UCSC Genome Browser custom track) |
Alignm length: | 213 |
Alignm identity: | 177 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 35, 29 |
Conread position: | 3-214 |
Cow position: | chr23:31390608-31390819 (view UCSC Genome Browser custom track) |
Alignm length: | 214 |
Alignm identity: | 172 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 36, 30 |
Conread position: | 3-216 |
Cow position: | chr23:17247554-17247342 (view UCSC Genome Browser custom track) |
Alignm length: | 216 |
Alignm identity: | 173 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 36, 30 |
Conread position: | 3-216 |
Cow position: | chr23:34995893-34996105 (view UCSC Genome Browser custom track) |
Alignm length: | 215 |
Alignm identity: | 178 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 37, 30 |
Conread position: | 3-216 |
Cow position: | chr23:36426873-36427085 (view UCSC Genome Browser custom track) |
Alignm length: | 216 |
Alignm identity: | 167 |
Alignm E-value: | 1.99965e-42 |
Alignm gaps (pig, cow): | 36, 30 |
Conread position: | 3-218 |
Cow position: | chr23:35322537-35322751 (view UCSC Genome Browser custom track) |
Alignm length: | 216 |
Alignm identity: | 169 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 174, 0 |
Conread position: | 3-232 |
Cow position: | chr23:31187702-31187930 (view UCSC Genome Browser custom track) |
Alignm length: | 230 |
Alignm identity: | 187 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 30, 0 |
Conread position: | 4-202 |
Cow position: | chr23:18024453-18024261 (view UCSC Genome Browser custom track) |
Alignm length: | 200 |
Alignm identity: | 160 |
Alignm E-value: | 1.99965e-42 |
Alignm gaps (pig, cow): | 53, 29 |
Conread position: | 4-213 |
Cow position: | chr23:39121835-39122043 (view UCSC Genome Browser custom track) |
Alignm length: | 210 |
Alignm identity: | 168 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 57, 0 |
Conread position: | 4-214 |
Cow position: | chr23:31085802-31085591 (view UCSC Genome Browser custom track) |
Alignm length: | 214 |
Alignm identity: | 171 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 10, 30 |
Conread position: | 5-215 |
Cow position: | chr23:7048028-7047819 (view UCSC Genome Browser custom track) |
Alignm length: | 212 |
Alignm identity: | 171 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 34, 28 |
Conread position: | 6-115 |
Cow position: | chr23:18917507-18917398 (view UCSC Genome Browser custom track) |
Alignm length: | 111 |
Alignm identity: | 91 |
Alignm E-value: | 6e-23 |
Alignm gaps (pig, cow): | 33, 27 |
Conread position: | 6-162 |
Cow position: | chr23:32346198-32346356 (view UCSC Genome Browser custom track) |
Alignm length: | 160 |
Alignm identity: | 132 |
Alignm E-value: | 3e-37 |
Alignm gaps (pig, cow): | 8, 29 |
Conread position: | 6-170 |
Cow position: | chr23:14712058-14712222 (view UCSC Genome Browser custom track) |
Alignm length: | 166 |
Alignm identity: | 134 |
Alignm E-value: | 9e-38 |
Alignm gaps (pig, cow): | 33, 27 |
Conread position: | 6-206 |
Cow position: | chr23:26088098-26087899 (view UCSC Genome Browser custom track) |
Alignm length: | 202 |
Alignm identity: | 161 |
Alignm E-value: | 1.4013e-45 |
Alignm gaps (pig, cow): | 33, 27 |
Conread position: | 6-206 |
Cow position: | chr23:40316058-40315857 (view UCSC Genome Browser custom track) |
Alignm length: | 211 |
Alignm identity: | 162 |
Alignm E-value: | 2e-32 |
Alignm gaps (pig, cow): | 33, 27 |
Conread position: | 6-213 |
Cow position: | chr23:5225411-5225618 (view UCSC Genome Browser custom track) |
Alignm length: | 209 |
Alignm identity: | 175 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 33, 27 |
Conread position: | 6-213 |
Cow position: | chr23:31966005-31966210 (view UCSC Genome Browser custom track) |
Alignm length: | 208 |
Alignm identity: | 170 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 77, 0 |
Conread position: | 6-215 |
Cow position: | chr23:34324989-34325199 (view UCSC Genome Browser custom track) |
Alignm length: | 212 |
Alignm identity: | 171 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 33, 27 |
Conread position: | 6-215 |
Cow position: | chr23:35410503-35410714 (view UCSC Genome Browser custom track) |
Alignm length: | 212 |
Alignm identity: | 161 |
Alignm E-value: | 4.99983e-42 |
Alignm gaps (pig, cow): | 76, 0 |
Conread position: | 6-215 |
Cow position: | chr23:35720573-35720780 (view UCSC Genome Browser custom track) |
Alignm length: | 211 |
Alignm identity: | 160 |
Alignm E-value: | 3e-39 |
Alignm gaps (pig, cow): | 33, 27 |
Conread position: | 6-215 |
Cow position: | chr23:37340213-37340005 (view UCSC Genome Browser custom track) |
Alignm length: | 212 |
Alignm identity: | 175 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 10, 28 |
Conread position: | 6-216 |
Cow position: | chr23:37673190-37673402 (view UCSC Genome Browser custom track) |
Alignm length: | 213 |
Alignm identity: | 168 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 182, 0 |
Conread position: | 7-130 |
Cow position: | chr23:11246060-11246187 (view UCSC Genome Browser custom track) |
Alignm length: | 129 |
Alignm identity: | 110 |
Alignm E-value: | 1e-29 |
Alignm gaps (pig, cow): | 32, 26 |
Conread position: | 7-131 |
Cow position: | chr23:7404387-7404511 (view UCSC Genome Browser custom track) |
Alignm length: | 126 |
Alignm identity: | 101 |
Alignm E-value: | 2e-25 |
Alignm gaps (pig, cow): | 16, 27 |
Conread position: | 7-211 |
Cow position: | chr23:2506775-2506989 (view UCSC Genome Browser custom track) |
Alignm length: | 216 |
Alignm identity: | 164 |
Alignm E-value: | 8e-37 |
Alignm gaps (pig, cow): | 32, 26 |
Conread position: | 7-213 |
Cow position: | chr23:16203839-16204045 (view UCSC Genome Browser custom track) |
Alignm length: | 207 |
Alignm identity: | 154 |
Alignm E-value: | 3e-39 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 7-214 |
Cow position: | chr23:29605905-29606111 (view UCSC Genome Browser custom track) |
Alignm length: | 209 |
Alignm identity: | 171 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 32, 26 |
Conread position: | 7-214 |
Cow position: | chr23:36274339-36274132 (view UCSC Genome Browser custom track) |
Alignm length: | 209 |
Alignm identity: | 161 |
Alignm E-value: | 5.00264e-43 |
Alignm gaps (pig, cow): | 32, 26 |
Conread position: | 7-215 |
Cow position: | chr23:9958478-9958684 (view UCSC Genome Browser custom track) |
Alignm length: | 210 |
Alignm identity: | 166 |
Alignm E-value: | 1.4013e-45 |
Alignm gaps (pig, cow): | 32, 24 |
Conread position: | 7-215 |
Cow position: | chr23:19768172-19768380 (view UCSC Genome Browser custom track) |
Alignm length: | 210 |
Alignm identity: | 169 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 32, 26 |
Conread position: | 7-215 |
Cow position: | chr23:26822921-26823128 (view UCSC Genome Browser custom track) |
Alignm length: | 212 |
Alignm identity: | 170 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 32, 8 |
Conread position: | 7-215 |
Cow position: | chr23:38475008-38475215 (view UCSC Genome Browser custom track) |
Alignm length: | 210 |
Alignm identity: | 170 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 32, 26 |
Conread position: | 7-216 |
Cow position: | chr23:16656375-16656586 (view UCSC Genome Browser custom track) |
Alignm length: | 214 |
Alignm identity: | 170 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 32, 26 |
Conread position: | 7-228 |
Cow position: | chr23:15223127-15223349 (view UCSC Genome Browser custom track) |
Alignm length: | 224 |
Alignm identity: | 165 |
Alignm E-value: | 1e-38 |
Alignm gaps (pig, cow): | 32, 26 |
Conread position: | 8-183 |
Cow position: | chr23:22358851-22359025 (view UCSC Genome Browser custom track) |
Alignm length: | 177 |
Alignm identity: | 147 |
Alignm E-value: | 6.02558e-44 |
Alignm gaps (pig, cow): | 31, 27 |
Conread position: | 8-215 |
Cow position: | chr23:32135509-32135307 (view UCSC Genome Browser custom track) |
Alignm length: | 209 |
Alignm identity: | 158 |
Alignm E-value: | 8e-37 |
Alignm gaps (pig, cow): | 31, 24 |
Conread position: | 9-124 |
Cow position: | chr23:16876388-16876274 (view UCSC Genome Browser custom track) |
Alignm length: | 117 |
Alignm identity: | 97 |
Alignm E-value: | 7e-25 |
Alignm gaps (pig, cow): | 30, 8 |
Conread position: | 9-218 |
Cow position: | chr23:18663665-18663883 (view UCSC Genome Browser custom track) |
Alignm length: | 220 |
Alignm identity: | 176 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 30, 24 |
Conread position: | 9-236 |
Cow position: | chr23:39898210-39897984 (view UCSC Genome Browser custom track) |
Alignm length: | 230 |
Alignm identity: | 187 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 30, 24 |
Conread position: | 10-215 |
Cow position: | chr23:11222043-11222253 (view UCSC Genome Browser custom track) |
Alignm length: | 215 |
Alignm identity: | 156 |
Alignm E-value: | 1e-28 |
Alignm gaps (pig, cow): | 14, 70 |
Conread position: | 10-215 |
Cow position: | chr23:35676001-35675795 (view UCSC Genome Browser custom track) |
Alignm length: | 209 |
Alignm identity: | 166 |
Alignm E-value: | 1.4013e-45 |
Alignm gaps (pig, cow): | 12, 23 |
Conread position: | 10-215 |
Cow position: | chr23:40517161-40516957 (view UCSC Genome Browser custom track) |
Alignm length: | 206 |
Alignm identity: | 159 |
Alignm E-value: | 2.00386e-43 |
Alignm gaps (pig, cow): | 167, 0 |
Conread position: | 13-216 |
Cow position: | chr23:34491464-34491674 (view UCSC Genome Browser custom track) |
Alignm length: | 214 |
Alignm identity: | 165 |
Alignm E-value: | 9e-38 |
Alignm gaps (pig, cow): | 150, 90 |
Conread position: | 20-205 |
Cow position: | chr23:29417006-29416814 (view UCSC Genome Browser custom track) |
Alignm length: | 195 |
Alignm identity: | 147 |
Alignm E-value: | 1e-30 |
Alignm gaps (pig, cow): | 27, 13 |
Conread position: | 20-214 |
Cow position: | chr23:3760559-3760356 (view UCSC Genome Browser custom track) |
Alignm length: | 205 |
Alignm identity: | 152 |
Alignm E-value: | 4e-31 |
Alignm gaps (pig, cow): | 153, 119 |
Show alignments to all cow chromosomes.