Cow genome map

Conread name: unkn-SGD602702291.R1

Conread position: 1-114
Cow position: chr23:26944145-26944258 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 95
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 38, 32

Conread position: 1-132
Cow position: chr23:9535461-9535591 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 101
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 110, 0

Conread position: 1-132
Cow position: chr23:33331283-33331414 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 107
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 37, 32

Conread position: 1-181
Cow position: chr23:34928820-34928640 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 145
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 38, 32

Conread position: 1-214
Cow position: chr23:26158898-26159107 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 166
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 46, 20

Conread position: 2-94
Cow position: chr23:26183615-26183707 (view UCSC Genome Browser custom track)
Alignm length: 94
Alignm identity: 81
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 37, 31

Conread position: 2-119
Cow position: chr23:38847458-38847341 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 96
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 37, 31

Conread position: 2-125
Cow position: chr23:28712093-28712212 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 104
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 31, 0

Conread position: 2-173
Cow position: chr23:39214970-39215140 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 132
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 37, 31

Conread position: 2-215
Cow position: chr23:13355834-13356047 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 175
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 170

Conread position: 2-215
Cow position: chr23:30629164-30628955 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 166
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 37, 31

Conread position: 2-215
Cow position: chr23:32048501-32048289 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 164
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 37, 31

Conread position: 2-216
Cow position: chr23:15030138-15030351 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 171
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 31

Conread position: 2-223
Cow position: chr23:12356525-12356750 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 164
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 37, 31

Conread position: 3-155
Cow position: chr23:11072087-11072240 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 124
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 36, 30

Conread position: 3-200
Cow position: chr23:40816856-40817043 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 157
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 36, 30

Conread position: 3-203
Cow position: chr23:18741478-18741678 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 154
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 36, 30

Conread position: 3-205
Cow position: chr23:30040806-30040603 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 167
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 30

Conread position: 3-213
Cow position: chr23:22296275-22296483 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 170
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 30

Conread position: 3-214
Cow position: chr23:30653078-30652867 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 177
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 29

Conread position: 3-214
Cow position: chr23:31390608-31390819 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 172
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 30

Conread position: 3-216
Cow position: chr23:17247554-17247342 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 173
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 30

Conread position: 3-216
Cow position: chr23:34995893-34996105 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 178
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 30

Conread position: 3-216
Cow position: chr23:36426873-36427085 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 167
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 36, 30

Conread position: 3-218
Cow position: chr23:35322537-35322751 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 169
Alignm E-value: 0
Alignm gaps (pig, cow): 174, 0

Conread position: 3-232
Cow position: chr23:31187702-31187930 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 187
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 0

Conread position: 4-202
Cow position: chr23:18024453-18024261 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 160
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 53, 29

Conread position: 4-213
Cow position: chr23:39121835-39122043 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 168
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 0

Conread position: 4-214
Cow position: chr23:31085802-31085591 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 171
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 30

Conread position: 5-215
Cow position: chr23:7048028-7047819 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 171
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 28

Conread position: 6-115
Cow position: chr23:18917507-18917398 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 91
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 33, 27

Conread position: 6-162
Cow position: chr23:32346198-32346356 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 132
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 8, 29

Conread position: 6-170
Cow position: chr23:14712058-14712222 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 134
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 33, 27

Conread position: 6-206
Cow position: chr23:26088098-26087899 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 161
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 33, 27

Conread position: 6-206
Cow position: chr23:40316058-40315857 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 162
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 33, 27

Conread position: 6-213
Cow position: chr23:5225411-5225618 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 175
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 27

Conread position: 6-213
Cow position: chr23:31966005-31966210 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 170
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 0

Conread position: 6-215
Cow position: chr23:34324989-34325199 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 171
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 27

Conread position: 6-215
Cow position: chr23:35410503-35410714 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 161
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 76, 0

Conread position: 6-215
Cow position: chr23:35720573-35720780 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 160
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 33, 27

Conread position: 6-215
Cow position: chr23:37340213-37340005 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 175
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 28

Conread position: 6-216
Cow position: chr23:37673190-37673402 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 168
Alignm E-value: 0
Alignm gaps (pig, cow): 182, 0

Conread position: 7-130
Cow position: chr23:11246060-11246187 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 110
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 32, 26

Conread position: 7-131
Cow position: chr23:7404387-7404511 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 101
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 16, 27

Conread position: 7-211
Cow position: chr23:2506775-2506989 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 164
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 32, 26

Conread position: 7-213
Cow position: chr23:16203839-16204045 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 154
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 0, 0

Conread position: 7-214
Cow position: chr23:29605905-29606111 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 171
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 26

Conread position: 7-214
Cow position: chr23:36274339-36274132 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 161
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 32, 26

Conread position: 7-215
Cow position: chr23:9958478-9958684 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 166
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 32, 24

Conread position: 7-215
Cow position: chr23:19768172-19768380 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 169
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 26

Conread position: 7-215
Cow position: chr23:26822921-26823128 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 170
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 8

Conread position: 7-215
Cow position: chr23:38475008-38475215 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 170
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 26

Conread position: 7-216
Cow position: chr23:16656375-16656586 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 170
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 26

Conread position: 7-228
Cow position: chr23:15223127-15223349 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 165
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 32, 26

Conread position: 8-183
Cow position: chr23:22358851-22359025 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 147
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 31, 27

Conread position: 8-215
Cow position: chr23:32135509-32135307 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 158
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 31, 24

Conread position: 9-124
Cow position: chr23:16876388-16876274 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 97
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 30, 8

Conread position: 9-218
Cow position: chr23:18663665-18663883 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 176
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 24

Conread position: 9-236
Cow position: chr23:39898210-39897984 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 187
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 24

Conread position: 10-215
Cow position: chr23:11222043-11222253 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 156
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 14, 70

Conread position: 10-215
Cow position: chr23:35676001-35675795 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 166
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 12, 23

Conread position: 10-215
Cow position: chr23:40517161-40516957 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 159
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 167, 0

Conread position: 13-216
Cow position: chr23:34491464-34491674 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 165
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 150, 90

Conread position: 20-205
Cow position: chr23:29417006-29416814 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 147
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 27, 13

Conread position: 20-214
Cow position: chr23:3760559-3760356 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 152
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 153, 119

Show alignments to all cow chromosomes.