Cow genome map

Conread name: unkn-SGD602702291.R1

Conread position: 1-114
Cow position:
Alignm length: 115
Alignm identity: 95
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 38, 32

Conread position: 1-132
Cow position:
Alignm length: 132
Alignm identity: 101
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 110, 0

Conread position: 1-132
Cow position:
Alignm length: 133
Alignm identity: 107
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 37, 32

Conread position: 1-181
Cow position:
Alignm length: 182
Alignm identity: 145
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 38, 32

Conread position: 1-214
Cow position:
Alignm length: 215
Alignm identity: 166
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 46, 20

Conread position: 2-94
Cow position:
Alignm length: 94
Alignm identity: 81
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 37, 31

Conread position: 2-119
Cow position:
Alignm length: 119
Alignm identity: 96
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 37, 31

Conread position: 2-125
Cow position:
Alignm length: 124
Alignm identity: 104
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 31, 0

Conread position: 2-173
Cow position:
Alignm length: 173
Alignm identity: 132
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 37, 31

Conread position: 2-215
Cow position:
Alignm length: 215
Alignm identity: 175
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 170

Conread position: 2-215
Cow position:
Alignm length: 215
Alignm identity: 166
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 37, 31

Conread position: 2-215
Cow position:
Alignm length: 215
Alignm identity: 164
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 37, 31

Conread position: 2-216
Cow position:
Alignm length: 216
Alignm identity: 171
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 31

Conread position: 2-223
Cow position:
Alignm length: 227
Alignm identity: 164
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 37, 31

Conread position: 3-155
Cow position:
Alignm length: 155
Alignm identity: 124
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 36, 30

Conread position: 3-200
Cow position:
Alignm length: 199
Alignm identity: 157
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 36, 30

Conread position: 3-203
Cow position:
Alignm length: 202
Alignm identity: 154
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 36, 30

Conread position: 3-205
Cow position:
Alignm length: 205
Alignm identity: 167
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 30

Conread position: 3-213
Cow position:
Alignm length: 212
Alignm identity: 170
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 30

Conread position: 3-214
Cow position:
Alignm length: 213
Alignm identity: 177
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 29

Conread position: 3-214
Cow position:
Alignm length: 214
Alignm identity: 172
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 30

Conread position: 3-216
Cow position:
Alignm length: 216
Alignm identity: 173
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 30

Conread position: 3-216
Cow position:
Alignm length: 215
Alignm identity: 178
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 30

Conread position: 3-216
Cow position:
Alignm length: 216
Alignm identity: 167
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 36, 30

Conread position: 3-218
Cow position:
Alignm length: 216
Alignm identity: 169
Alignm E-value: 0
Alignm gaps (pig, cow): 174, 0

Conread position: 3-232
Cow position:
Alignm length: 230
Alignm identity: 187
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 0

Conread position: 4-202
Cow position:
Alignm length: 200
Alignm identity: 160
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 53, 29

Conread position: 4-213
Cow position:
Alignm length: 210
Alignm identity: 168
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 0

Conread position: 4-214
Cow position:
Alignm length: 214
Alignm identity: 171
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 30

Conread position: 5-215
Cow position:
Alignm length: 212
Alignm identity: 171
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 28

Conread position: 6-115
Cow position:
Alignm length: 111
Alignm identity: 91
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 33, 27

Conread position: 6-162
Cow position:
Alignm length: 160
Alignm identity: 132
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 8, 29

Conread position: 6-170
Cow position:
Alignm length: 166
Alignm identity: 134
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 33, 27

Conread position: 6-206
Cow position:
Alignm length: 202
Alignm identity: 161
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 33, 27

Conread position: 6-206
Cow position:
Alignm length: 211
Alignm identity: 162
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 33, 27

Conread position: 6-213
Cow position:
Alignm length: 209
Alignm identity: 175
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 27

Conread position: 6-213
Cow position:
Alignm length: 208
Alignm identity: 170
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 0

Conread position: 6-215
Cow position:
Alignm length: 212
Alignm identity: 171
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 27

Conread position: 6-215
Cow position:
Alignm length: 212
Alignm identity: 161
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 76, 0

Conread position: 6-215
Cow position:
Alignm length: 211
Alignm identity: 160
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 33, 27

Conread position: 6-215
Cow position:
Alignm length: 212
Alignm identity: 175
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 28

Conread position: 6-216
Cow position:
Alignm length: 213
Alignm identity: 168
Alignm E-value: 0
Alignm gaps (pig, cow): 182, 0

Conread position: 7-130
Cow position:
Alignm length: 129
Alignm identity: 110
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 32, 26

Conread position: 7-131
Cow position:
Alignm length: 126
Alignm identity: 101
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 16, 27

Conread position: 7-211
Cow position:
Alignm length: 216
Alignm identity: 164
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 32, 26

Conread position: 7-213
Cow position:
Alignm length: 207
Alignm identity: 154
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 0, 0

Conread position: 7-214
Cow position:
Alignm length: 209
Alignm identity: 171
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 26

Conread position: 7-214
Cow position:
Alignm length: 209
Alignm identity: 161
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 32, 26

Conread position: 7-215
Cow position:
Alignm length: 210
Alignm identity: 166
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 32, 24

Conread position: 7-215
Cow position:
Alignm length: 210
Alignm identity: 169
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 26

Conread position: 7-215
Cow position:
Alignm length: 212
Alignm identity: 170
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 8

Conread position: 7-215
Cow position:
Alignm length: 210
Alignm identity: 170
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 26

Conread position: 7-216
Cow position:
Alignm length: 214
Alignm identity: 170
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 26

Conread position: 7-228
Cow position:
Alignm length: 224
Alignm identity: 165
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 32, 26

Conread position: 8-183
Cow position:
Alignm length: 177
Alignm identity: 147
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 31, 27

Conread position: 8-215
Cow position:
Alignm length: 209
Alignm identity: 158
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 31, 24

Conread position: 9-124
Cow position:
Alignm length: 117
Alignm identity: 97
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 30, 8

Conread position: 9-218
Cow position:
Alignm length: 220
Alignm identity: 176
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 24

Conread position: 9-236
Cow position:
Alignm length: 230
Alignm identity: 187
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 24

Conread position: 10-215
Cow position:
Alignm length: 215
Alignm identity: 156
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 14, 70

Conread position: 10-215
Cow position:
Alignm length: 209
Alignm identity: 166
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 12, 23

Conread position: 10-215
Cow position:
Alignm length: 206
Alignm identity: 159
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 167, 0

Conread position: 13-216
Cow position:
Alignm length: 214
Alignm identity: 165
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 150, 90

Conread position: 20-205
Cow position:
Alignm length: 195
Alignm identity: 147
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 27, 13

Conread position: 20-214
Cow position:
Alignm length: 205
Alignm identity: 152
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 153, 119

Show alignments to all cow chromosomes.