Cow genome map

Conread name: unkn-SGD602702291.R1

Conread position: 1-123
Cow position:
Alignm length: 124
Alignm identity: 103
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 38, 32

Conread position: 1-181
Cow position:
Alignm length: 182
Alignm identity: 139
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 38, 32

Conread position: 1-202
Cow position:
Alignm length: 203
Alignm identity: 160
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 38, 30

Conread position: 1-212
Cow position:
Alignm length: 213
Alignm identity: 170
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 32

Conread position: 1-213
Cow position:
Alignm length: 214
Alignm identity: 171
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 32

Conread position: 1-214
Cow position:
Alignm length: 215
Alignm identity: 170
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 38, 16

Conread position: 1-217
Cow position:
Alignm length: 218
Alignm identity: 176
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 32

Conread position: 2-132
Cow position:
Alignm length: 132
Alignm identity: 107
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 37, 31

Conread position: 2-137
Cow position:
Alignm length: 137
Alignm identity: 108
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 37, 33

Conread position: 2-170
Cow position:
Alignm length: 170
Alignm identity: 131
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 37, 30

Conread position: 2-174
Cow position:
Alignm length: 176
Alignm identity: 133
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 37, 31

Conread position: 2-211
Cow position:
Alignm length: 211
Alignm identity: 161
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 37, 31

Conread position: 2-215
Cow position:
Alignm length: 215
Alignm identity: 170
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 13

Conread position: 2-215
Cow position:
Alignm length: 215
Alignm identity: 167
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 37, 31

Conread position: 2-215
Cow position:
Alignm length: 216
Alignm identity: 171
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 31

Conread position: 2-216
Cow position:
Alignm length: 218
Alignm identity: 164
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 37, 30

Conread position: 2-216
Cow position:
Alignm length: 215
Alignm identity: 166
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 177, 0

Conread position: 3-124
Cow position:
Alignm length: 123
Alignm identity: 100
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 36, 30

Conread position: 3-131
Cow position:
Alignm length: 130
Alignm identity: 108
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 36, 28

Conread position: 3-171
Cow position:
Alignm length: 169
Alignm identity: 130
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 0, 0

Conread position: 3-212
Cow position:
Alignm length: 217
Alignm identity: 166
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 120, 175

Conread position: 3-214
Cow position:
Alignm length: 213
Alignm identity: 172
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 28

Conread position: 3-214
Cow position:
Alignm length: 214
Alignm identity: 166
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 17, 76

Conread position: 3-214
Cow position:
Alignm length: 218
Alignm identity: 169
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 133, 30

Conread position: 3-215
Cow position:
Alignm length: 213
Alignm identity: 170
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 3-215
Cow position:
Alignm length: 214
Alignm identity: 165
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 36, 30

Conread position: 3-215
Cow position:
Alignm length: 216
Alignm identity: 170
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 13, 31

Conread position: 3-216
Cow position:
Alignm length: 216
Alignm identity: 166
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 36, 30

Conread position: 3-217
Cow position:
Alignm length: 216
Alignm identity: 173
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 30

Conread position: 3-217
Cow position:
Alignm length: 215
Alignm identity: 169
Alignm E-value: 0
Alignm gaps (pig, cow): 130, 0

Conread position: 3-218
Cow position:
Alignm length: 218
Alignm identity: 170
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 30

Conread position: 3-221
Cow position:
Alignm length: 220
Alignm identity: 169
Alignm E-value: 0
Alignm gaps (pig, cow): 196, 0

Conread position: 3-227
Cow position:
Alignm length: 225
Alignm identity: 178
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 3-227
Cow position:
Alignm length: 227
Alignm identity: 178
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 30

Conread position: 3-239
Cow position:
Alignm length: 239
Alignm identity: 187
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 30

Conread position: 4-170
Cow position:
Alignm length: 169
Alignm identity: 135
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 45, 29

Conread position: 4-216
Cow position:
Alignm length: 214
Alignm identity: 168
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 29

Conread position: 4-226
Cow position:
Alignm length: 227
Alignm identity: 177
Alignm E-value: 0
Alignm gaps (pig, cow): 210, 0

Conread position: 5-136
Cow position:
Alignm length: 132
Alignm identity: 115
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 28, 0

Conread position: 5-176
Cow position:
Alignm length: 174
Alignm identity: 138
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 34, 28

Conread position: 5-217
Cow position:
Alignm length: 215
Alignm identity: 170
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 28

Conread position: 5-222
Cow position:
Alignm length: 218
Alignm identity: 168
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 0

Conread position: 6-124
Cow position:
Alignm length: 120
Alignm identity: 98
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 33, 27

Conread position: 6-124
Cow position:
Alignm length: 120
Alignm identity: 99
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 41, 27

Conread position: 6-131
Cow position:
Alignm length: 127
Alignm identity: 101
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 33, 27

Conread position: 6-152
Cow position:
Alignm length: 148
Alignm identity: 121
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 33, 25

Conread position: 6-169
Cow position:
Alignm length: 167
Alignm identity: 135
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 33, 27

Conread position: 6-204
Cow position:
Alignm length: 201
Alignm identity: 164
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 27

Conread position: 6-212
Cow position:
Alignm length: 208
Alignm identity: 167
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 27

Conread position: 6-213
Cow position:
Alignm length: 209
Alignm identity: 173
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 27

Conread position: 6-216
Cow position:
Alignm length: 212
Alignm identity: 166
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 33, 27

Conread position: 6-216
Cow position:
Alignm length: 212
Alignm identity: 173
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 27

Conread position: 6-217
Cow position:
Alignm length: 215
Alignm identity: 176
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 26

Conread position: 6-219
Cow position:
Alignm length: 216
Alignm identity: 176
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 29

Conread position: 6-222
Cow position:
Alignm length: 219
Alignm identity: 174
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 28

Conread position: 6-222
Cow position:
Alignm length: 218
Alignm identity: 162
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 33, 27

Conread position: 6-223
Cow position:
Alignm length: 218
Alignm identity: 168
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 154, 0

Conread position: 7-131
Cow position:
Alignm length: 127
Alignm identity: 105
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 32, 26

Conread position: 7-205
Cow position:
Alignm length: 199
Alignm identity: 159
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 7-212
Cow position:
Alignm length: 207
Alignm identity: 169
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 26

Conread position: 7-213
Cow position:
Alignm length: 208
Alignm identity: 163
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 0

Conread position: 7-214
Cow position:
Alignm length: 208
Alignm identity: 165
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 7-216
Cow position:
Alignm length: 212
Alignm identity: 156
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 32, 26

Conread position: 7-242
Cow position:
Alignm length: 238
Alignm identity: 177
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 32, 26

Conread position: 7-249
Cow position:
Alignm length: 246
Alignm identity: 193
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 26

Conread position: 8-134
Cow position:
Alignm length: 128
Alignm identity: 107
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 32, 25

Conread position: 9-168
Cow position:
Alignm length: 161
Alignm identity: 128
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 30, 24

Conread position: 9-215
Cow position:
Alignm length: 208
Alignm identity: 161
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 30, 24

Conread position: 9-216
Cow position:
Alignm length: 221
Alignm identity: 171
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 35, 24

Conread position: 9-220
Cow position:
Alignm length: 212
Alignm identity: 168
Alignm E-value: 0
Alignm gaps (pig, cow): 165, 0

Conread position: 10-215
Cow position:
Alignm length: 216
Alignm identity: 174
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 23

Conread position: 14-215
Cow position:
Alignm length: 203
Alignm identity: 159
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 25, 19

Conread position: 15-216
Cow position:
Alignm length: 203
Alignm identity: 165
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 18

Conread position: 15-216
Cow position:
Alignm length: 210
Alignm identity: 157
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 157, 198

Conread position: 20-130
Cow position:
Alignm length: 113
Alignm identity: 93
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 13, 20

Conread position: 20-220
Cow position:
Alignm length: 210
Alignm identity: 157
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 19, 13

Conread position: 23-215
Cow position:
Alignm length: 204
Alignm identity: 155
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 16, 10

Conread position: 29-215
Cow position:
Alignm length: 187
Alignm identity: 144
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 148, 0

Show alignments to all cow chromosomes.