Cow genome map

Conread name: unkn-SGD602702291.R1

Conread position: 1-86
Cow position:
Alignm length: 87
Alignm identity: 77
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 38, 32

Conread position: 1-124
Cow position:
Alignm length: 125
Alignm identity: 99
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 38, 32

Conread position: 1-215
Cow position:
Alignm length: 216
Alignm identity: 170
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 32

Conread position: 1-215
Cow position:
Alignm length: 216
Alignm identity: 167
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 43, 32

Conread position: 1-215
Cow position:
Alignm length: 217
Alignm identity: 167
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 61, 32

Conread position: 1-216
Cow position:
Alignm length: 220
Alignm identity: 166
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 15, 33

Conread position: 1-228
Cow position:
Alignm length: 229
Alignm identity: 180
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 32

Conread position: 1-233
Cow position:
Alignm length: 236
Alignm identity: 184
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 34

Conread position: 2-131
Cow position:
Alignm length: 131
Alignm identity: 110
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 37, 31

Conread position: 2-232
Cow position:
Alignm length: 234
Alignm identity: 185
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 32

Conread position: 3-125
Cow position:
Alignm length: 124
Alignm identity: 104
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 36, 30

Conread position: 3-162
Cow position:
Alignm length: 161
Alignm identity: 131
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 36, 30

Conread position: 3-190
Cow position:
Alignm length: 190
Alignm identity: 151
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 9, 31

Conread position: 3-198
Cow position:
Alignm length: 198
Alignm identity: 159
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 41, 30

Conread position: 3-198
Cow position:
Alignm length: 197
Alignm identity: 151
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 36, 30

Conread position: 3-214
Cow position:
Alignm length: 213
Alignm identity: 174
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 28

Conread position: 3-214
Cow position:
Alignm length: 213
Alignm identity: 167
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 30

Conread position: 3-214
Cow position:
Alignm length: 213
Alignm identity: 166
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 36, 30

Conread position: 3-215
Cow position:
Alignm length: 214
Alignm identity: 173
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 30

Conread position: 3-215
Cow position:
Alignm length: 215
Alignm identity: 174
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 31

Conread position: 3-215
Cow position:
Alignm length: 214
Alignm identity: 173
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 30

Conread position: 3-215
Cow position:
Alignm length: 216
Alignm identity: 171
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 30

Conread position: 3-215
Cow position:
Alignm length: 214
Alignm identity: 169
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 30

Conread position: 3-218
Cow position:
Alignm length: 218
Alignm identity: 175
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 30

Conread position: 3-220
Cow position:
Alignm length: 219
Alignm identity: 173
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 28

Conread position: 3-220
Cow position:
Alignm length: 225
Alignm identity: 166
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 16, 31

Conread position: 3-230
Cow position:
Alignm length: 229
Alignm identity: 186
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 32

Conread position: 4-215
Cow position:
Alignm length: 214
Alignm identity: 176
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 29

Conread position: 4-215
Cow position:
Alignm length: 222
Alignm identity: 165
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 153, 29

Conread position: 5-180
Cow position:
Alignm length: 177
Alignm identity: 145
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 34, 9

Conread position: 5-214
Cow position:
Alignm length: 211
Alignm identity: 172
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 28

Conread position: 5-214
Cow position:
Alignm length: 211
Alignm identity: 173
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 6

Conread position: 5-215
Cow position:
Alignm length: 222
Alignm identity: 166
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 34, 28

Conread position: 5-231
Cow position:
Alignm length: 228
Alignm identity: 171
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 34, 28

Conread position: 6-133
Cow position:
Alignm length: 129
Alignm identity: 109
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 50, 27

Conread position: 6-183
Cow position:
Alignm length: 179
Alignm identity: 150
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 27

Conread position: 6-191
Cow position:
Alignm length: 187
Alignm identity: 147
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 33, 27

Conread position: 6-199
Cow position:
Alignm length: 195
Alignm identity: 113
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 41, 26

Conread position: 6-202
Cow position:
Alignm length: 198
Alignm identity: 168
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 27

Conread position: 6-204
Cow position:
Alignm length: 201
Alignm identity: 168
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 28

Conread position: 6-214
Cow position:
Alignm length: 211
Alignm identity: 169
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 27

Conread position: 6-215
Cow position:
Alignm length: 211
Alignm identity: 174
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 25

Conread position: 6-216
Cow position:
Alignm length: 214
Alignm identity: 169
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 33, 27

Conread position: 6-217
Cow position:
Alignm length: 214
Alignm identity: 172
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 27

Conread position: 6-223
Cow position:
Alignm length: 220
Alignm identity: 176
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 27

Conread position: 7-111
Cow position:
Alignm length: 106
Alignm identity: 89
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 32, 26

Conread position: 7-193
Cow position:
Alignm length: 188
Alignm identity: 152
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 32, 26

Conread position: 7-206
Cow position:
Alignm length: 201
Alignm identity: 167
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 26

Conread position: 7-213
Cow position:
Alignm length: 208
Alignm identity: 164
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 32, 25

Conread position: 7-215
Cow position:
Alignm length: 214
Alignm identity: 176
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 26

Conread position: 7-215
Cow position:
Alignm length: 216
Alignm identity: 169
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 79, 9

Conread position: 7-215
Cow position:
Alignm length: 216
Alignm identity: 168
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 78, 9

Conread position: 7-215
Cow position:
Alignm length: 212
Alignm identity: 175
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 0

Conread position: 7-216
Cow position:
Alignm length: 211
Alignm identity: 171
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 26

Conread position: 7-221
Cow position:
Alignm length: 216
Alignm identity: 168
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 26

Conread position: 7-223
Cow position:
Alignm length: 218
Alignm identity: 168
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 32, 26

Conread position: 8-214
Cow position:
Alignm length: 209
Alignm identity: 172
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 24

Conread position: 9-136
Cow position:
Alignm length: 129
Alignm identity: 109
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 13, 25

Conread position: 9-160
Cow position:
Alignm length: 153
Alignm identity: 134
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 30, 24

Conread position: 9-204
Cow position:
Alignm length: 197
Alignm identity: 156
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 30, 24

Conread position: 9-212
Cow position:
Alignm length: 205
Alignm identity: 160
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 16, 101

Conread position: 9-216
Cow position:
Alignm length: 217
Alignm identity: 158
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 13, 26

Conread position: 10-221
Cow position:
Alignm length: 215
Alignm identity: 170
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 24

Conread position: 12-220
Cow position:
Alignm length: 209
Alignm identity: 160
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 173, 0

Conread position: 13-215
Cow position:
Alignm length: 213
Alignm identity: 160
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 26, 20

Conread position: 15-212
Cow position:
Alignm length: 208
Alignm identity: 168
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 24, 18

Conread position: 20-205
Cow position:
Alignm length: 187
Alignm identity: 142
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 19, 13

Show alignments to all cow chromosomes.