Cow genome map


           Conread name:
           unkn-SGD602702291.R1
        

               Conread position:
               1-217
               

               Cow position:
               
               

               Alignm length:
               218
               

               Alignm identity:
               173
               

               Alignm E-value:
               3.99931e-42
               

               Alignm gaps (pig, cow):
               38, 32
               

               Conread position:
               1-231
               

               Cow position:
               
               

               Alignm length:
               231
               

               Alignm identity:
               176
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 0
               

               Conread position:
               2-209
               

               Cow position:
               
               

               Alignm length:
               211
               

               Alignm identity:
               162
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               12, 58
               

               Conread position:
               2-214
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               160
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               37, 31
               

               Conread position:
               2-215
               

               Cow position:
               
               

               Alignm length:
               217
               

               Alignm identity:
               179
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 31
               

               Conread position:
               2-215
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               169
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               37, 31
               

               Conread position:
               3-134
               

               Cow position:
               
               

               Alignm length:
               133
               

               Alignm identity:
               106
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               36, 30
               

               Conread position:
               3-134
               

               Cow position:
               
               

               Alignm length:
               133
               

               Alignm identity:
               105
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               36, 30
               

               Conread position:
               3-200
               

               Cow position:
               
               

               Alignm length:
               199
               

               Alignm identity:
               158
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               36, 31
               

               Conread position:
               3-205
               

               Cow position:
               
               

               Alignm length:
               204
               

               Alignm identity:
               163
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 30
               

               Conread position:
               3-212
               

               Cow position:
               
               

               Alignm length:
               218
               

               Alignm identity:
               174
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 30
               

               Conread position:
               3-213
               

               Cow position:
               
               

               Alignm length:
               212
               

               Alignm identity:
               167
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 30
               

               Conread position:
               3-214
               

               Cow position:
               
               

               Alignm length:
               212
               

               Alignm identity:
               172
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               30, 0
               

               Conread position:
               3-215
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               168
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 30
               

               Conread position:
               3-215
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               169
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 30
               

               Conread position:
               3-215
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               176
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               169, 0
               

               Conread position:
               3-216
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               172
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 30
               

               Conread position:
               3-216
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               173
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 30
               

               Conread position:
               3-217
               

               Cow position:
               
               

               Alignm length:
               224
               

               Alignm identity:
               171
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               36, 30
               

               Conread position:
               3-217
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               169
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 31
               

               Conread position:
               3-217
               

               Cow position:
               
               

               Alignm length:
               217
               

               Alignm identity:
               174
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               35, 30
               

               Conread position:
               3-220
               

               Cow position:
               
               

               Alignm length:
               219
               

               Alignm identity:
               168
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               36, 30
               

               Conread position:
               3-227
               

               Cow position:
               
               

               Alignm length:
               235
               

               Alignm identity:
               178
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               36, 30
               

               Conread position:
               4-206
               

               Cow position:
               
               

               Alignm length:
               204
               

               Alignm identity:
               155
               

               Alignm E-value:
               7e-37
               

               Alignm gaps (pig, cow):
               33, 29
               

               Conread position:
               4-213
               

               Cow position:
               
               

               Alignm length:
               211
               

               Alignm identity:
               162
               

               Alignm E-value:
               3.9937e-43
               

               Alignm gaps (pig, cow):
               35, 29
               

               Conread position:
               4-215
               

               Cow position:
               
               

               Alignm length:
               212
               

               Alignm identity:
               172
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               168, 0
               

               Conread position:
               4-215
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               169
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               35, 29
               

               Conread position:
               6-131
               

               Cow position:
               
               

               Alignm length:
               128
               

               Alignm identity:
               109
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               33, 27
               

               Conread position:
               6-170
               

               Cow position:
               
               

               Alignm length:
               166
               

               Alignm identity:
               138
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               33, 27
               

               Conread position:
               6-194
               

               Cow position:
               
               

               Alignm length:
               189
               

               Alignm identity:
               146
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               58, 0
               

               Conread position:
               6-214
               

               Cow position:
               
               

               Alignm length:
               220
               

               Alignm identity:
               173
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               33, 27
               

               Conread position:
               6-215
               

               Cow position:
               
               

               Alignm length:
               211
               

               Alignm identity:
               164
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               38, 27
               

               Conread position:
               6-216
               

               Cow position:
               
               

               Alignm length:
               211
               

               Alignm identity:
               163
               

               Alignm E-value:
               3.9937e-43
               

               Alignm gaps (pig, cow):
               105, 0
               

               Conread position:
               6-216
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               165
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               56, 27
               

               Conread position:
               6-217
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               168
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               188, 112
               

               Conread position:
               6-218
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               173
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 27
               

               Conread position:
               6-225
               

               Cow position:
               
               

               Alignm length:
               222
               

               Alignm identity:
               181
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               10, 28
               

               Conread position:
               6-231
               

               Cow position:
               
               

               Alignm length:
               228
               

               Alignm identity:
               172
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               196, 127
               

               Conread position:
               7-212
               

               Cow position:
               
               

               Alignm length:
               207
               

               Alignm identity:
               166
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 26
               

               Conread position:
               7-213
               

               Cow position:
               
               

               Alignm length:
               208
               

               Alignm identity:
               172
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 26
               

               Conread position:
               7-213
               

               Cow position:
               
               

               Alignm length:
               208
               

               Alignm identity:
               163
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               32, 24
               

               Conread position:
               7-215
               

               Cow position:
               
               

               Alignm length:
               211
               

               Alignm identity:
               178
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 26
               

               Conread position:
               8-134
               

               Cow position:
               
               

               Alignm length:
               128
               

               Alignm identity:
               104
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               31, 25
               

               Conread position:
               8-181
               

               Cow position:
               
               

               Alignm length:
               175
               

               Alignm identity:
               135
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               125, 170
               

               Conread position:
               8-203
               

               Cow position:
               
               

               Alignm length:
               196
               

               Alignm identity:
               154
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               169, 0
               

               Conread position:
               8-214
               

               Cow position:
               
               

               Alignm length:
               208
               

               Alignm identity:
               163
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               31, 25
               

               Conread position:
               9-181
               

               Cow position:
               
               

               Alignm length:
               175
               

               Alignm identity:
               144
               

               Alignm E-value:
               3.99931e-42
               

               Alignm gaps (pig, cow):
               30, 24
               

               Conread position:
               9-213
               

               Cow position:
               
               

               Alignm length:
               206
               

               Alignm identity:
               158
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               30, 24
               

               Conread position:
               9-214
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               164
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               154, 0
               

               Conread position:
               9-225
               

               Cow position:
               
               

               Alignm length:
               220
               

               Alignm identity:
               174
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               30, 24
               

               Conread position:
               10-134
               

               Cow position:
               
               

               Alignm length:
               126
               

               Alignm identity:
               107
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               37, 23
               

               Conread position:
               10-168
               

               Cow position:
               
               

               Alignm length:
               159
               

               Alignm identity:
               118
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               10-217
               

               Cow position:
               
               

               Alignm length:
               209
               

               Alignm identity:
               157
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               29, 22
               

               Conread position:
               10-218
               

               Cow position:
               
               

               Alignm length:
               212
               

               Alignm identity:
               162
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               19, 7
               

               Conread position:
               20-215
               

               Cow position:
               
               

               Alignm length:
               198
               

               Alignm identity:
               152
               

               Alignm E-value:
               8e-38
               

               Alignm gaps (pig, cow):
               28, 15
               

               Conread position:
               20-216
               

               Cow position:
               
               

               Alignm length:
               198
               

               Alignm identity:
               157
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               175, 44
               
Show alignments to all cow chromosomes.