Cow genome map
| Conread name: | unkn-SGD602702291.R1 |
| Conread position: | 1-217 |
| Cow position: | chr26:9827879-9828083 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 173 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 38, 32 |
| Conread position: | 1-231 |
| Cow position: | chr26:4234914-4235142 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 176 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 2-209 |
| Cow position: | chr26:12120366-12120158 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 162 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 12, 58 |
| Conread position: | 2-214 |
| Cow position: | chr26:35187831-35188039 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 160 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 37, 31 |
| Conread position: | 2-215 |
| Cow position: | chr26:21894260-21894475 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 179 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 31 |
| Conread position: | 2-215 |
| Cow position: | chr26:25236878-25236669 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 169 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 37, 31 |
| Conread position: | 3-134 |
| Cow position: | chr26:2433739-2433608 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 106 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 36, 30 |
| Conread position: | 3-134 |
| Cow position: | chr26:4724008-4724135 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 105 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 36, 30 |
| Conread position: | 3-200 |
| Cow position: | chr26:24950576-24950379 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 158 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 36, 31 |
| Conread position: | 3-205 |
| Cow position: | chr26:25381264-25381466 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 163 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 30 |
| Conread position: | 3-212 |
| Cow position: | chr26:12821449-12821664 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 174 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 30 |
| Conread position: | 3-213 |
| Cow position: | chr26:6540430-6540640 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 167 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 30 |
| Conread position: | 3-214 |
| Cow position: | chr26:34981992-34982200 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 172 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 3-215 |
| Cow position: | chr26:23199266-23199478 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 168 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 30 |
| Conread position: | 3-215 |
| Cow position: | chr26:25159255-25159467 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 169 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 30 |
| Conread position: | 3-215 |
| Cow position: | chr26:26307413-26307202 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 176 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 169, 0 |
| Conread position: | 3-216 |
| Cow position: | chr26:196371-196158 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 172 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 30 |
| Conread position: | 3-216 |
| Cow position: | chr26:29157088-29157299 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 173 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 30 |
| Conread position: | 3-217 |
| Cow position: | chr26:9565647-9565426 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 171 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 36, 30 |
| Conread position: | 3-217 |
| Cow position: | chr26:9814115-9813902 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 169 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 31 |
| Conread position: | 3-217 |
| Cow position: | chr26:27641098-27641313 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 174 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 30 |
| Conread position: | 3-220 |
| Cow position: | chr26:34117454-34117237 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 168 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 36, 30 |
| Conread position: | 3-227 |
| Cow position: | chr26:32664053-32663822 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 178 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 36, 30 |
| Conread position: | 4-206 |
| Cow position: | chr26:2929745-2929944 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 155 |
| Alignm E-value: | 7e-37 |
| Alignm gaps (pig, cow): | 33, 29 |
| Conread position: | 4-213 |
| Cow position: | chr26:7941814-7941605 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 162 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 35, 29 |
| Conread position: | 4-215 |
| Cow position: | chr26:11995241-11995031 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 172 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 168, 0 |
| Conread position: | 4-215 |
| Cow position: | chr26:22999668-22999877 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 169 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 29 |
| Conread position: | 6-131 |
| Cow position: | chr26:12505767-12505641 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 109 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 33, 27 |
| Conread position: | 6-170 |
| Cow position: | chr26:25026750-25026588 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 138 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 33, 27 |
| Conread position: | 6-194 |
| Cow position: | chr26:17543017-17543204 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 146 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 6-214 |
| Cow position: | chr26:34040346-34040564 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 173 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 33, 27 |
| Conread position: | 6-215 |
| Cow position: | chr26:22294099-22293890 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 164 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 38, 27 |
| Conread position: | 6-216 |
| Cow position: | chr26:31723201-31722994 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 163 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 105, 0 |
| Conread position: | 6-216 |
| Cow position: | chr26:34335565-34335774 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 165 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 56, 27 |
| Conread position: | 6-217 |
| Cow position: | chr26:28338309-28338518 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 168 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 188, 112 |
| Conread position: | 6-218 |
| Cow position: | chr26:21693111-21693320 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 173 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 27 |
| Conread position: | 6-225 |
| Cow position: | chr26:14221318-14221099 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 181 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 28 |
| Conread position: | 6-231 |
| Cow position: | chr26:158734-158958 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 172 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 196, 127 |
| Conread position: | 7-212 |
| Cow position: | chr26:26327555-26327350 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 166 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 26 |
| Conread position: | 7-213 |
| Cow position: | chr26:22419560-22419764 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 172 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 26 |
| Conread position: | 7-213 |
| Cow position: | chr26:35570298-35570503 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 163 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 32, 24 |
| Conread position: | 7-215 |
| Cow position: | chr26:8180086-8179877 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 178 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 26 |
| Conread position: | 8-134 |
| Cow position: | chr26:12260398-12260272 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 104 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 31, 25 |
| Conread position: | 8-181 |
| Cow position: | chr26:33277071-33276898 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 135 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 125, 170 |
| Conread position: | 8-203 |
| Cow position: | chr26:3286276-3286082 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 154 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 169, 0 |
| Conread position: | 8-214 |
| Cow position: | chr26:12754452-12754246 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 163 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 31, 25 |
| Conread position: | 9-181 |
| Cow position: | chr26:26980489-26980662 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 144 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 30, 24 |
| Conread position: | 9-213 |
| Cow position: | chr26:11104472-11104269 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 158 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 30, 24 |
| Conread position: | 9-214 |
| Cow position: | chr26:22563596-22563382 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 164 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 154, 0 |
| Conread position: | 9-225 |
| Cow position: | chr26:29784449-29784231 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 174 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 24 |
| Conread position: | 10-134 |
| Cow position: | chr26:13804541-13804665 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 107 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 37, 23 |
| Conread position: | 10-168 |
| Cow position: | chr26:29002295-29002137 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 118 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 10-217 |
| Cow position: | chr26:20621176-20621382 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 157 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 29, 22 |
| Conread position: | 10-218 |
| Cow position: | chr26:10410022-10410231 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 162 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 19, 7 |
| Conread position: | 20-215 |
| Cow position: | chr26:4555663-4555858 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 152 |
| Alignm E-value: | 8e-38 |
| Alignm gaps (pig, cow): | 28, 15 |
| Conread position: | 20-216 |
| Cow position: | chr26:32540372-32540567 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 157 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 175, 44 |
Show alignments to all cow chromosomes.