Cow genome map
Conread name: | unkn-SGD602702291.R1 |
Conread position: | 1-212 |
Cow position: | chr27:23928629-23928846 (view UCSC Genome Browser custom track) |
Alignm length: | 220 |
Alignm identity: | 165 |
Alignm E-value: | 6e-36 |
Alignm gaps (pig, cow): | 12, 33 |
Conread position: | 1-215 |
Cow position: | chr27:15103895-15104109 (view UCSC Genome Browser custom track) |
Alignm length: | 216 |
Alignm identity: | 174 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 38, 32 |
Conread position: | 1-217 |
Cow position: | chr27:24690901-24690684 (view UCSC Genome Browser custom track) |
Alignm length: | 219 |
Alignm identity: | 176 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 46, 32 |
Conread position: | 2-219 |
Cow position: | chr27:19854830-19854621 (view UCSC Genome Browser custom track) |
Alignm length: | 220 |
Alignm identity: | 170 |
Alignm E-value: | 8.99998e-41 |
Alignm gaps (pig, cow): | 37, 31 |
Conread position: | 3-124 |
Cow position: | chr27:16777138-16777260 (view UCSC Genome Browser custom track) |
Alignm length: | 124 |
Alignm identity: | 101 |
Alignm E-value: | 2e-25 |
Alignm gaps (pig, cow): | 36, 30 |
Conread position: | 3-131 |
Cow position: | chr27:21571798-21571926 (view UCSC Genome Browser custom track) |
Alignm length: | 129 |
Alignm identity: | 106 |
Alignm E-value: | 1e-30 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 3-173 |
Cow position: | chr27:14651225-14651055 (view UCSC Genome Browser custom track) |
Alignm length: | 171 |
Alignm identity: | 132 |
Alignm E-value: | 2e-35 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 3-174 |
Cow position: | chr27:30274879-30274708 (view UCSC Genome Browser custom track) |
Alignm length: | 173 |
Alignm identity: | 136 |
Alignm E-value: | 2e-36 |
Alignm gaps (pig, cow): | 36, 30 |
Conread position: | 3-206 |
Cow position: | chr27:6655396-6655597 (view UCSC Genome Browser custom track) |
Alignm length: | 205 |
Alignm identity: | 160 |
Alignm E-value: | 3.99931e-42 |
Alignm gaps (pig, cow): | 36, 30 |
Conread position: | 3-212 |
Cow position: | chr27:13438156-13438367 (view UCSC Genome Browser custom track) |
Alignm length: | 213 |
Alignm identity: | 168 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 36, 30 |
Conread position: | 3-215 |
Cow position: | chr27:15570238-15570029 (view UCSC Genome Browser custom track) |
Alignm length: | 214 |
Alignm identity: | 169 |
Alignm E-value: | 1.4013e-45 |
Alignm gaps (pig, cow): | 36, 30 |
Conread position: | 3-215 |
Cow position: | chr27:25103558-25103346 (view UCSC Genome Browser custom track) |
Alignm length: | 214 |
Alignm identity: | 169 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 36, 30 |
Conread position: | 3-216 |
Cow position: | chr27:15517023-15516813 (view UCSC Genome Browser custom track) |
Alignm length: | 215 |
Alignm identity: | 169 |
Alignm E-value: | 5.60519e-45 |
Alignm gaps (pig, cow): | 36, 30 |
Conread position: | 3-217 |
Cow position: | chr27:3264806-3264584 (view UCSC Genome Browser custom track) |
Alignm length: | 224 |
Alignm identity: | 178 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 35, 30 |
Conread position: | 3-218 |
Cow position: | chr27:17813908-17814123 (view UCSC Genome Browser custom track) |
Alignm length: | 217 |
Alignm identity: | 173 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 44, 30 |
Conread position: | 3-239 |
Cow position: | chr27:21724603-21724367 (view UCSC Genome Browser custom track) |
Alignm length: | 238 |
Alignm identity: | 186 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 36, 28 |
Conread position: | 4-215 |
Cow position: | chr27:2407781-2407570 (view UCSC Genome Browser custom track) |
Alignm length: | 214 |
Alignm identity: | 166 |
Alignm E-value: | 9.94922e-44 |
Alignm gaps (pig, cow): | 43, 29 |
Conread position: | 4-218 |
Cow position: | chr27:96876-97090 (view UCSC Genome Browser custom track) |
Alignm length: | 215 |
Alignm identity: | 162 |
Alignm E-value: | 3.9937e-43 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 5-134 |
Cow position: | chr27:30445741-30445871 (view UCSC Genome Browser custom track) |
Alignm length: | 132 |
Alignm identity: | 108 |
Alignm E-value: | 2e-28 |
Alignm gaps (pig, cow): | 11, 29 |
Conread position: | 5-212 |
Cow position: | chr27:5551114-5551328 (view UCSC Genome Browser custom track) |
Alignm length: | 218 |
Alignm identity: | 167 |
Alignm E-value: | 2e-37 |
Alignm gaps (pig, cow): | 34, 28 |
Conread position: | 5-216 |
Cow position: | chr27:27624685-27624896 (view UCSC Genome Browser custom track) |
Alignm length: | 214 |
Alignm identity: | 172 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 34, 28 |
Conread position: | 6-193 |
Cow position: | chr27:11201529-11201716 (view UCSC Genome Browser custom track) |
Alignm length: | 189 |
Alignm identity: | 151 |
Alignm E-value: | 3.9937e-43 |
Alignm gaps (pig, cow): | 33, 27 |
Conread position: | 6-213 |
Cow position: | chr27:9639311-9639518 (view UCSC Genome Browser custom track) |
Alignm length: | 210 |
Alignm identity: | 162 |
Alignm E-value: | 9.99967e-42 |
Alignm gaps (pig, cow): | 10, 28 |
Conread position: | 6-216 |
Cow position: | chr27:29157965-29157755 (view UCSC Genome Browser custom track) |
Alignm length: | 213 |
Alignm identity: | 172 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 41, 27 |
Conread position: | 6-217 |
Cow position: | chr27:8156584-8156383 (view UCSC Genome Browser custom track) |
Alignm length: | 214 |
Alignm identity: | 161 |
Alignm E-value: | 1e-33 |
Alignm gaps (pig, cow): | 33, 27 |
Conread position: | 6-218 |
Cow position: | chr27:11525410-11525199 (view UCSC Genome Browser custom track) |
Alignm length: | 215 |
Alignm identity: | 176 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 33, 27 |
Conread position: | 6-219 |
Cow position: | chr27:5105865-5105651 (view UCSC Genome Browser custom track) |
Alignm length: | 216 |
Alignm identity: | 172 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 33, 26 |
Conread position: | 6-230 |
Cow position: | chr27:18140677-18140451 (view UCSC Genome Browser custom track) |
Alignm length: | 228 |
Alignm identity: | 182 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 10, 28 |
Conread position: | 7-132 |
Cow position: | chr27:28511871-28511745 (view UCSC Genome Browser custom track) |
Alignm length: | 128 |
Alignm identity: | 103 |
Alignm E-value: | 2e-25 |
Alignm gaps (pig, cow): | 40, 24 |
Conread position: | 7-214 |
Cow position: | chr27:29178271-29178486 (view UCSC Genome Browser custom track) |
Alignm length: | 219 |
Alignm identity: | 172 |
Alignm E-value: | 3e-40 |
Alignm gaps (pig, cow): | 32, 26 |
Conread position: | 7-233 |
Cow position: | chr27:8079575-8079351 (view UCSC Genome Browser custom track) |
Alignm length: | 229 |
Alignm identity: | 170 |
Alignm E-value: | 8e-39 |
Alignm gaps (pig, cow): | 32, 26 |
Conread position: | 8-214 |
Cow position: | chr27:29956627-29956421 (view UCSC Genome Browser custom track) |
Alignm length: | 207 |
Alignm identity: | 155 |
Alignm E-value: | 3e-40 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 9-123 |
Cow position: | chr27:22037570-22037456 (view UCSC Genome Browser custom track) |
Alignm length: | 116 |
Alignm identity: | 98 |
Alignm E-value: | 2e-27 |
Alignm gaps (pig, cow): | 30, 24 |
Conread position: | 10-136 |
Cow position: | chr27:6522433-6522560 (view UCSC Genome Browser custom track) |
Alignm length: | 128 |
Alignm identity: | 103 |
Alignm E-value: | 2e-27 |
Alignm gaps (pig, cow): | 52, 0 |
Conread position: | 10-216 |
Cow position: | chr27:26120487-26120284 (view UCSC Genome Browser custom track) |
Alignm length: | 210 |
Alignm identity: | 164 |
Alignm E-value: | 3e-40 |
Alignm gaps (pig, cow): | 29, 23 |
Conread position: | 10-225 |
Cow position: | chr27:27882465-27882257 (view UCSC Genome Browser custom track) |
Alignm length: | 217 |
Alignm identity: | 168 |
Alignm E-value: | 3e-40 |
Alignm gaps (pig, cow): | 29, 23 |
Conread position: | 10-242 |
Cow position: | chr27:315544-315780 (view UCSC Genome Browser custom track) |
Alignm length: | 237 |
Alignm identity: | 185 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 207, 0 |
Conread position: | 12-281 |
Cow position: | chr27:11160553-11160820 (view UCSC Genome Browser custom track) |
Alignm length: | 272 |
Alignm identity: | 166 |
Alignm E-value: | 7e-38 |
Alignm gaps (pig, cow): | 27, 21 |
Conread position: | 13-215 |
Cow position: | chr27:6858903-6858701 (view UCSC Genome Browser custom track) |
Alignm length: | 203 |
Alignm identity: | 155 |
Alignm E-value: | 3.99931e-42 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 14-215 |
Cow position: | chr27:7852472-7852267 (view UCSC Genome Browser custom track) |
Alignm length: | 206 |
Alignm identity: | 156 |
Alignm E-value: | 8e-39 |
Alignm gaps (pig, cow): | 126, 0 |
Conread position: | 17-226 |
Cow position: | chr27:19305652-19305432 (view UCSC Genome Browser custom track) |
Alignm length: | 223 |
Alignm identity: | 167 |
Alignm E-value: | 4e-33 |
Alignm gaps (pig, cow): | 16, 21 |
Conread position: | 20-155 |
Cow position: | chr27:22334184-22334319 (view UCSC Genome Browser custom track) |
Alignm length: | 136 |
Alignm identity: | 108 |
Alignm E-value: | 3e-29 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 23-215 |
Cow position: | chr27:9568216-9568024 (view UCSC Genome Browser custom track) |
Alignm length: | 194 |
Alignm identity: | 155 |
Alignm E-value: | 9.80909e-45 |
Alignm gaps (pig, cow): | 173, 148 |
Show alignments to all cow chromosomes.