Cow genome map


           Conread name:
           unkn-SGD602702291.R1
        

               Conread position:
               1-192
               

               Cow position:
               
               

               Alignm length:
               192
               

               Alignm identity:
               157
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 0
               

               Conread position:
               1-198
               

               Cow position:
               
               

               Alignm length:
               198
               

               Alignm identity:
               168
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-215
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               170
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               38, 32
               

               Conread position:
               1-215
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               174
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               38, 32
               

               Conread position:
               1-216
               

               Cow position:
               
               

               Alignm length:
               217
               

               Alignm identity:
               177
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               38, 32
               

               Conread position:
               1-219
               

               Cow position:
               
               

               Alignm length:
               221
               

               Alignm identity:
               172
               

               Alignm E-value:
               5.04467e-44
               

               Alignm gaps (pig, cow):
               38, 32
               

               Conread position:
               1-224
               

               Cow position:
               
               

               Alignm length:
               227
               

               Alignm identity:
               179
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               38, 31
               

               Conread position:
               2-170
               

               Cow position:
               
               

               Alignm length:
               170
               

               Alignm identity:
               130
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               2-228
               

               Cow position:
               
               

               Alignm length:
               231
               

               Alignm identity:
               183
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               30, 46
               

               Conread position:
               2-246
               

               Cow position:
               
               

               Alignm length:
               257
               

               Alignm identity:
               192
               

               Alignm E-value:
               5.04467e-44
               

               Alignm gaps (pig, cow):
               34, 0
               

               Conread position:
               3-131
               

               Cow position:
               
               

               Alignm length:
               130
               

               Alignm identity:
               104
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               36, 30
               

               Conread position:
               3-194
               

               Cow position:
               
               

               Alignm length:
               193
               

               Alignm identity:
               145
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               177, 70
               

               Conread position:
               3-198
               

               Cow position:
               
               

               Alignm length:
               198
               

               Alignm identity:
               153
               

               Alignm E-value:
               8e-39
               

               Alignm gaps (pig, cow):
               36, 30
               

               Conread position:
               3-200
               

               Cow position:
               
               

               Alignm length:
               199
               

               Alignm identity:
               159
               

               Alignm E-value:
               5.04467e-44
               

               Alignm gaps (pig, cow):
               36, 13
               

               Conread position:
               3-203
               

               Cow position:
               
               

               Alignm length:
               203
               

               Alignm identity:
               155
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               35, 30
               

               Conread position:
               3-214
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               163
               

               Alignm E-value:
               3.99931e-42
               

               Alignm gaps (pig, cow):
               48, 30
               

               Conread position:
               3-215
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               168
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 30
               

               Conread position:
               3-215
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               175
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               196, 0
               

               Conread position:
               3-215
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               162
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               36, 30
               

               Conread position:
               3-243
               

               Cow position:
               
               

               Alignm length:
               242
               

               Alignm identity:
               187
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 30
               

               Conread position:
               4-181
               

               Cow position:
               
               

               Alignm length:
               179
               

               Alignm identity:
               144
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               34, 29
               

               Conread position:
               5-130
               

               Cow position:
               
               

               Alignm length:
               127
               

               Alignm identity:
               102
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               34, 28
               

               Conread position:
               5-203
               

               Cow position:
               
               

               Alignm length:
               201
               

               Alignm identity:
               160
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               34, 28
               

               Conread position:
               5-211
               

               Cow position:
               
               

               Alignm length:
               208
               

               Alignm identity:
               161
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               34, 28
               

               Conread position:
               5-215
               

               Cow position:
               
               

               Alignm length:
               211
               

               Alignm identity:
               167
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               119, 0
               

               Conread position:
               5-215
               

               Cow position:
               
               

               Alignm length:
               212
               

               Alignm identity:
               173
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               42, 28
               

               Conread position:
               5-220
               

               Cow position:
               
               

               Alignm length:
               217
               

               Alignm identity:
               169
               

               Alignm E-value:
               3.99931e-42
               

               Alignm gaps (pig, cow):
               34, 28
               

               Conread position:
               6-170
               

               Cow position:
               
               

               Alignm length:
               166
               

               Alignm identity:
               139
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               33, 27
               

               Conread position:
               6-204
               

               Cow position:
               
               

               Alignm length:
               205
               

               Alignm identity:
               157
               

               Alignm E-value:
               8e-38
               

               Alignm gaps (pig, cow):
               7, 28
               

               Conread position:
               6-212
               

               Cow position:
               
               

               Alignm length:
               208
               

               Alignm identity:
               169
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               41, 27
               

               Conread position:
               6-213
               

               Cow position:
               
               

               Alignm length:
               210
               

               Alignm identity:
               169
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 28
               

               Conread position:
               6-214
               

               Cow position:
               
               

               Alignm length:
               211
               

               Alignm identity:
               165
               

               Alignm E-value:
               5.04467e-44
               

               Alignm gaps (pig, cow):
               33, 27
               

               Conread position:
               6-215
               

               Cow position:
               
               

               Alignm length:
               211
               

               Alignm identity:
               161
               

               Alignm E-value:
               3.99931e-42
               

               Alignm gaps (pig, cow):
               33, 27
               

               Conread position:
               6-216
               

               Cow position:
               
               

               Alignm length:
               212
               

               Alignm identity:
               166
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               33, 27
               

               Conread position:
               6-218
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               163
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               132, 0
               

               Conread position:
               6-230
               

               Cow position:
               
               

               Alignm length:
               228
               

               Alignm identity:
               178
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 26
               

               Conread position:
               6-244
               

               Cow position:
               
               

               Alignm length:
               252
               

               Alignm identity:
               188
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               33, 27
               

               Conread position:
               7-211
               

               Cow position:
               
               

               Alignm length:
               206
               

               Alignm identity:
               162
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               31, 8
               

               Conread position:
               7-217
               

               Cow position:
               
               

               Alignm length:
               212
               

               Alignm identity:
               168
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 26
               

               Conread position:
               7-223
               

               Cow position:
               
               

               Alignm length:
               221
               

               Alignm identity:
               171
               

               Alignm E-value:
               5.04467e-44
               

               Alignm gaps (pig, cow):
               9, 27
               

               Conread position:
               8-150
               

               Cow position:
               
               

               Alignm length:
               143
               

               Alignm identity:
               115
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               8-215
               

               Cow position:
               
               

               Alignm length:
               218
               

               Alignm identity:
               164
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               31, 25
               

               Conread position:
               8-215
               

               Cow position:
               
               

               Alignm length:
               209
               

               Alignm identity:
               161
               

               Alignm E-value:
               8e-38
               

               Alignm gaps (pig, cow):
               31, 25
               

               Conread position:
               9-214
               

               Cow position:
               
               

               Alignm length:
               206
               

               Alignm identity:
               161
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               160, 0
               

               Conread position:
               9-216
               

               Cow position:
               
               

               Alignm length:
               217
               

               Alignm identity:
               169
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               30, 24
               

               Conread position:
               10-197
               

               Cow position:
               
               

               Alignm length:
               189
               

               Alignm identity:
               148
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               37, 22
               

               Conread position:
               10-206
               

               Cow position:
               
               

               Alignm length:
               208
               

               Alignm identity:
               157
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               29, 23
               

               Conread position:
               10-215
               

               Cow position:
               
               

               Alignm length:
               210
               

               Alignm identity:
               164
               

               Alignm E-value:
               3.99931e-42
               

               Alignm gaps (pig, cow):
               29, 23
               

               Conread position:
               10-215
               

               Cow position:
               
               

               Alignm length:
               208
               

               Alignm identity:
               161
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               40, 5
               
Show alignments to all cow chromosomes.