Cow genome map
| Conread name: | unkn-SGD602702291.R1 |
| Conread position: | 1-192 |
| Cow position: | chr28:18109530-18109720 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 157 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 1-198 |
| Cow position: | chr28:17643694-17643891 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 168 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-215 |
| Cow position: | chr28:16676676-16676462 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 170 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 32 |
| Conread position: | 1-215 |
| Cow position: | chr28:21148111-21148322 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 174 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 32 |
| Conread position: | 1-216 |
| Cow position: | chr28:26233329-26233544 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 177 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 32 |
| Conread position: | 1-219 |
| Cow position: | chr28:17941714-17941929 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 172 |
| Alignm E-value: | 5.04467e-44 |
| Alignm gaps (pig, cow): | 38, 32 |
| Conread position: | 1-224 |
| Cow position: | chr28:20306260-20306483 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 179 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 31 |
| Conread position: | 2-170 |
| Cow position: | chr28:33177253-33177422 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 130 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 2-228 |
| Cow position: | chr28:21077924-21078153 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 183 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 46 |
| Conread position: | 2-246 |
| Cow position: | chr28:30612584-30612328 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 192 |
| Alignm E-value: | 5.04467e-44 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 3-131 |
| Cow position: | chr28:6272664-6272792 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 104 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 36, 30 |
| Conread position: | 3-194 |
| Cow position: | chr28:30926332-30926517 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 145 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 177, 70 |
| Conread position: | 3-198 |
| Cow position: | chr28:28618321-28618126 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 153 |
| Alignm E-value: | 8e-39 |
| Alignm gaps (pig, cow): | 36, 30 |
| Conread position: | 3-200 |
| Cow position: | chr28:9098538-9098733 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 159 |
| Alignm E-value: | 5.04467e-44 |
| Alignm gaps (pig, cow): | 36, 13 |
| Conread position: | 3-203 |
| Cow position: | chr28:21936940-21937141 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 155 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 35, 30 |
| Conread position: | 3-214 |
| Cow position: | chr28:5552699-5552909 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 163 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 48, 30 |
| Conread position: | 3-215 |
| Cow position: | chr28:2204650-2204438 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 168 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 30 |
| Conread position: | 3-215 |
| Cow position: | chr28:7109675-7109460 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 175 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 196, 0 |
| Conread position: | 3-215 |
| Cow position: | chr28:23710474-23710262 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 162 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 36, 30 |
| Conread position: | 3-243 |
| Cow position: | chr28:18446078-18446317 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 187 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 30 |
| Conread position: | 4-181 |
| Cow position: | chr28:17016400-17016577 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 144 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 34, 29 |
| Conread position: | 5-130 |
| Cow position: | chr28:2068118-2068243 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 102 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 34, 28 |
| Conread position: | 5-203 |
| Cow position: | chr28:33293125-33293324 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 160 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 34, 28 |
| Conread position: | 5-211 |
| Cow position: | chr28:30443393-30443596 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 161 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 34, 28 |
| Conread position: | 5-215 |
| Cow position: | chr28:1569132-1568923 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 167 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 119, 0 |
| Conread position: | 5-215 |
| Cow position: | chr28:32330783-32330992 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 173 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 28 |
| Conread position: | 5-220 |
| Cow position: | chr28:9455313-9455521 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 169 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 34, 28 |
| Conread position: | 6-170 |
| Cow position: | chr28:11244904-11245068 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 139 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 33, 27 |
| Conread position: | 6-204 |
| Cow position: | chr28:19043089-19043292 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 157 |
| Alignm E-value: | 8e-38 |
| Alignm gaps (pig, cow): | 7, 28 |
| Conread position: | 6-212 |
| Cow position: | chr28:19026287-19026492 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 169 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 27 |
| Conread position: | 6-213 |
| Cow position: | chr28:26565528-26565735 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 169 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 28 |
| Conread position: | 6-214 |
| Cow position: | chr28:30730132-30730340 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 165 |
| Alignm E-value: | 5.04467e-44 |
| Alignm gaps (pig, cow): | 33, 27 |
| Conread position: | 6-215 |
| Cow position: | chr28:7872933-7873142 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 161 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 33, 27 |
| Conread position: | 6-216 |
| Cow position: | chr28:6313273-6313064 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 166 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 33, 27 |
| Conread position: | 6-218 |
| Cow position: | chr28:34365013-34365223 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 163 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 132, 0 |
| Conread position: | 6-230 |
| Cow position: | chr28:13895794-13895568 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 178 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 26 |
| Conread position: | 6-244 |
| Cow position: | chr28:17216323-17216073 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 188 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 33, 27 |
| Conread position: | 7-211 |
| Cow position: | chr28:12415347-12415144 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 162 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 31, 8 |
| Conread position: | 7-217 |
| Cow position: | chr28:28577708-28577916 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 168 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 26 |
| Conread position: | 7-223 |
| Cow position: | chr28:11590666-11590885 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 171 |
| Alignm E-value: | 5.04467e-44 |
| Alignm gaps (pig, cow): | 9, 27 |
| Conread position: | 8-150 |
| Cow position: | chr28:13007728-13007586 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 115 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 8-215 |
| Cow position: | chr28:4464837-4465049 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 164 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 31, 25 |
| Conread position: | 8-215 |
| Cow position: | chr28:6969802-6970000 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 161 |
| Alignm E-value: | 8e-38 |
| Alignm gaps (pig, cow): | 31, 25 |
| Conread position: | 9-214 |
| Cow position: | chr28:29969731-29969527 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 161 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 160, 0 |
| Conread position: | 9-216 |
| Cow position: | chr28:26403278-26403063 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 169 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 30, 24 |
| Conread position: | 10-197 |
| Cow position: | chr28:1628150-1627964 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 148 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 37, 22 |
| Conread position: | 10-206 |
| Cow position: | chr28:32329965-32329761 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 157 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 29, 23 |
| Conread position: | 10-215 |
| Cow position: | chr28:9813206-9812999 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 164 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 29, 23 |
| Conread position: | 10-215 |
| Cow position: | chr28:13886447-13886651 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 161 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 40, 5 |
Show alignments to all cow chromosomes.