Cow genome map

Conread name: unkn-SGD602702291.R1

Conread position: 1-131
Cow position:
Alignm length: 136
Alignm identity: 113
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 38, 31

Conread position: 1-212
Cow position:
Alignm length: 215
Alignm identity: 171
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 32

Conread position: 1-212
Cow position:
Alignm length: 213
Alignm identity: 174
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 32

Conread position: 1-214
Cow position:
Alignm length: 215
Alignm identity: 164
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 38, 31

Conread position: 1-216
Cow position:
Alignm length: 219
Alignm identity: 165
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 56, 35

Conread position: 1-217
Cow position:
Alignm length: 219
Alignm identity: 182
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 31

Conread position: 1-221
Cow position:
Alignm length: 230
Alignm identity: 181
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 38, 14

Conread position: 2-213
Cow position:
Alignm length: 213
Alignm identity: 169
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 31

Conread position: 2-214
Cow position:
Alignm length: 214
Alignm identity: 171
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 31

Conread position: 2-214
Cow position:
Alignm length: 214
Alignm identity: 170
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 31

Conread position: 2-215
Cow position:
Alignm length: 224
Alignm identity: 175
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 37, 31

Conread position: 2-217
Cow position:
Alignm length: 217
Alignm identity: 172
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 31

Conread position: 3-121
Cow position:
Alignm length: 120
Alignm identity: 99
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 54, 30

Conread position: 3-160
Cow position:
Alignm length: 159
Alignm identity: 129
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 36, 30

Conread position: 3-161
Cow position:
Alignm length: 163
Alignm identity: 130
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 35, 30

Conread position: 3-196
Cow position:
Alignm length: 195
Alignm identity: 160
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 30

Conread position: 3-205
Cow position:
Alignm length: 204
Alignm identity: 164
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 30

Conread position: 3-212
Cow position:
Alignm length: 211
Alignm identity: 161
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 36, 30

Conread position: 3-212
Cow position:
Alignm length: 211
Alignm identity: 174
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 30

Conread position: 3-212
Cow position:
Alignm length: 211
Alignm identity: 158
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 36, 30

Conread position: 3-213
Cow position:
Alignm length: 213
Alignm identity: 162
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 36, 30

Conread position: 3-214
Cow position:
Alignm length: 213
Alignm identity: 163
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 13, 188

Conread position: 3-215
Cow position:
Alignm length: 214
Alignm identity: 166
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 34, 30

Conread position: 3-215
Cow position:
Alignm length: 214
Alignm identity: 168
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 12

Conread position: 3-216
Cow position:
Alignm length: 218
Alignm identity: 174
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 30

Conread position: 3-216
Cow position:
Alignm length: 214
Alignm identity: 167
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 3-217
Cow position:
Alignm length: 216
Alignm identity: 178
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 30

Conread position: 3-217
Cow position:
Alignm length: 216
Alignm identity: 171
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 30

Conread position: 3-219
Cow position:
Alignm length: 218
Alignm identity: 174
Alignm E-value: 0
Alignm gaps (pig, cow): 139, 0

Conread position: 3-219
Cow position:
Alignm length: 218
Alignm identity: 165
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 36, 30

Conread position: 3-221
Cow position:
Alignm length: 220
Alignm identity: 161
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 36, 30

Conread position: 3-223
Cow position:
Alignm length: 223
Alignm identity: 176
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 30

Conread position: 5-120
Cow position:
Alignm length: 117
Alignm identity: 93
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 34, 28

Conread position: 5-174
Cow position:
Alignm length: 176
Alignm identity: 136
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 34, 28

Conread position: 5-197
Cow position:
Alignm length: 195
Alignm identity: 155
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 34, 30

Conread position: 5-215
Cow position:
Alignm length: 213
Alignm identity: 163
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 34, 29

Conread position: 6-132
Cow position:
Alignm length: 127
Alignm identity: 97
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 6-170
Cow position:
Alignm length: 166
Alignm identity: 138
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 33, 25

Conread position: 6-193
Cow position:
Alignm length: 189
Alignm identity: 144
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 32, 27

Conread position: 6-196
Cow position:
Alignm length: 197
Alignm identity: 146
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 33, 27

Conread position: 6-211
Cow position:
Alignm length: 206
Alignm identity: 162
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 6-211
Cow position:
Alignm length: 206
Alignm identity: 161
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 6-213
Cow position:
Alignm length: 209
Alignm identity: 157
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 67, 160

Conread position: 6-213
Cow position:
Alignm length: 209
Alignm identity: 170
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 27

Conread position: 6-215
Cow position:
Alignm length: 212
Alignm identity: 164
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 33, 27

Conread position: 6-215
Cow position:
Alignm length: 211
Alignm identity: 168
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 27

Conread position: 6-216
Cow position:
Alignm length: 212
Alignm identity: 168
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 27

Conread position: 6-217
Cow position:
Alignm length: 222
Alignm identity: 175
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 33, 27

Conread position: 6-228
Cow position:
Alignm length: 224
Alignm identity: 179
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 26

Conread position: 6-229
Cow position:
Alignm length: 225
Alignm identity: 181
Alignm E-value: 0
Alignm gaps (pig, cow): 201, 92

Conread position: 6-229
Cow position:
Alignm length: 227
Alignm identity: 186
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 27

Conread position: 7-213
Cow position:
Alignm length: 208
Alignm identity: 168
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 28

Conread position: 7-215
Cow position:
Alignm length: 210
Alignm identity: 162
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 32, 26

Conread position: 7-216
Cow position:
Alignm length: 211
Alignm identity: 166
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 32, 26

Conread position: 7-220
Cow position:
Alignm length: 215
Alignm identity: 165
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 32, 26

Conread position: 8-133
Cow position:
Alignm length: 127
Alignm identity: 105
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 31, 25

Conread position: 8-176
Cow position:
Alignm length: 170
Alignm identity: 145
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 25

Conread position: 8-210
Cow position:
Alignm length: 204
Alignm identity: 157
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 187, 163

Conread position: 9-171
Cow position:
Alignm length: 168
Alignm identity: 127
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 75, 0

Conread position: 9-204
Cow position:
Alignm length: 199
Alignm identity: 159
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 30, 24

Conread position: 9-210
Cow position:
Alignm length: 203
Alignm identity: 154
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 30, 24

Conread position: 9-215
Cow position:
Alignm length: 209
Alignm identity: 158
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 30, 24

Conread position: 10-119
Cow position:
Alignm length: 111
Alignm identity: 98
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 29, 22

Conread position: 10-213
Cow position:
Alignm length: 214
Alignm identity: 165
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 29, 23

Conread position: 10-215
Cow position:
Alignm length: 208
Alignm identity: 166
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 22

Conread position: 10-215
Cow position:
Alignm length: 207
Alignm identity: 167
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 29, 23

Conread position: 15-193
Cow position:
Alignm length: 180
Alignm identity: 140
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 27, 18

Conread position: 20-214
Cow position:
Alignm length: 196
Alignm identity: 149
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 182, 157

Conread position: 23-215
Cow position:
Alignm length: 204
Alignm identity: 162
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 16, 11

Show alignments to all cow chromosomes.