Cow genome map

Conread name: unkn-SGD602702291.R1

Conread position: 1-133
Cow position:
Alignm length: 134
Alignm identity: 102
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 36, 32

Conread position: 1-142
Cow position:
Alignm length: 143
Alignm identity: 119
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 38, 32

Conread position: 1-160
Cow position:
Alignm length: 161
Alignm identity: 130
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 38, 30

Conread position: 1-187
Cow position:
Alignm length: 189
Alignm identity: 141
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 122, 81

Conread position: 1-190
Cow position:
Alignm length: 191
Alignm identity: 152
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 36, 32

Conread position: 1-212
Cow position:
Alignm length: 213
Alignm identity: 166
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 38, 32

Conread position: 1-214
Cow position:
Alignm length: 224
Alignm identity: 175
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 38, 32

Conread position: 1-215
Cow position:
Alignm length: 215
Alignm identity: 167
Alignm E-value: 0
Alignm gaps (pig, cow): 159, 0

Conread position: 1-243
Cow position:
Alignm length: 245
Alignm identity: 192
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 32

Conread position: 2-131
Cow position:
Alignm length: 132
Alignm identity: 103
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 37, 31

Conread position: 2-170
Cow position:
Alignm length: 169
Alignm identity: 131
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 0, 0

Conread position: 2-197
Cow position:
Alignm length: 196
Alignm identity: 154
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 0, 0

Conread position: 2-198
Cow position:
Alignm length: 199
Alignm identity: 161
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 31

Conread position: 2-205
Cow position:
Alignm length: 205
Alignm identity: 165
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 32

Conread position: 2-210
Cow position:
Alignm length: 219
Alignm identity: 172
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 37, 31

Conread position: 2-211
Cow position:
Alignm length: 211
Alignm identity: 167
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 31

Conread position: 2-214
Cow position:
Alignm length: 214
Alignm identity: 172
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 31

Conread position: 2-215
Cow position:
Alignm length: 219
Alignm identity: 172
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 37, 31

Conread position: 2-215
Cow position:
Alignm length: 219
Alignm identity: 172
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 37, 31

Conread position: 2-216
Cow position:
Alignm length: 216
Alignm identity: 167
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 37, 31

Conread position: 2-216
Cow position:
Alignm length: 216
Alignm identity: 171
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 31

Conread position: 2-226
Cow position:
Alignm length: 239
Alignm identity: 181
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 37, 31

Conread position: 2-235
Cow position:
Alignm length: 234
Alignm identity: 177
Alignm E-value: 9.00054e-42
Alignm gaps (pig, cow): 121, 0

Conread position: 3-131
Cow position:
Alignm length: 130
Alignm identity: 103
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 36, 30

Conread position: 3-131
Cow position:
Alignm length: 130
Alignm identity: 105
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 36, 30

Conread position: 3-153
Cow position:
Alignm length: 152
Alignm identity: 119
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 36, 30

Conread position: 3-174
Cow position:
Alignm length: 176
Alignm identity: 135
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 36, 30

Conread position: 3-192
Cow position:
Alignm length: 191
Alignm identity: 154
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 36, 30

Conread position: 3-195
Cow position:
Alignm length: 194
Alignm identity: 150
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 20, 175

Conread position: 3-198
Cow position:
Alignm length: 197
Alignm identity: 149
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 36, 30

Conread position: 3-198
Cow position:
Alignm length: 196
Alignm identity: 147
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 0, 0

Conread position: 3-199
Cow position:
Alignm length: 198
Alignm identity: 162
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 30

Conread position: 3-211
Cow position:
Alignm length: 210
Alignm identity: 165
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 30

Conread position: 3-213
Cow position:
Alignm length: 212
Alignm identity: 162
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 36, 30

Conread position: 3-214
Cow position:
Alignm length: 223
Alignm identity: 174
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 36, 30

Conread position: 3-214
Cow position:
Alignm length: 213
Alignm identity: 164
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 36, 30

Conread position: 3-215
Cow position:
Alignm length: 214
Alignm identity: 167
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 36

Conread position: 3-215
Cow position:
Alignm length: 215
Alignm identity: 175
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 30

Conread position: 3-215
Cow position:
Alignm length: 215
Alignm identity: 167
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 36, 30

Conread position: 3-215
Cow position:
Alignm length: 215
Alignm identity: 168
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 36, 30

Conread position: 3-215
Cow position:
Alignm length: 218
Alignm identity: 163
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 36, 30

Conread position: 3-215
Cow position:
Alignm length: 214
Alignm identity: 170
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 30

Conread position: 3-215
Cow position:
Alignm length: 214
Alignm identity: 169
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 0

Conread position: 3-215
Cow position:
Alignm length: 214
Alignm identity: 167
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 36, 30

Conread position: 3-215
Cow position:
Alignm length: 214
Alignm identity: 168
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 44, 30

Conread position: 3-216
Cow position:
Alignm length: 219
Alignm identity: 176
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 30

Conread position: 3-216
Cow position:
Alignm length: 214
Alignm identity: 165
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 3-216
Cow position:
Alignm length: 215
Alignm identity: 164
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 36, 32

Conread position: 3-216
Cow position:
Alignm length: 215
Alignm identity: 174
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 30

Conread position: 3-217
Cow position:
Alignm length: 216
Alignm identity: 172
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 30

Conread position: 3-217
Cow position:
Alignm length: 216
Alignm identity: 179
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 30

Conread position: 3-219
Cow position:
Alignm length: 218
Alignm identity: 176
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 30

Conread position: 3-229
Cow position:
Alignm length: 228
Alignm identity: 176
Alignm E-value: 0
Alignm gaps (pig, cow): 210, 202

Conread position: 3-242
Cow position:
Alignm length: 244
Alignm identity: 181
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 9, 33

Conread position: 3-252
Cow position:
Alignm length: 251
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 30

Conread position: 3-415
Cow position:
Alignm length: 413
Alignm identity: 408
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 0

Conread position: 4-133
Cow position:
Alignm length: 131
Alignm identity: 108
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 35, 29

Conread position: 4-223
Cow position:
Alignm length: 221
Alignm identity: 163
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 43, 29

Conread position: 5-167
Cow position:
Alignm length: 164
Alignm identity: 132
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 34, 28

Conread position: 5-200
Cow position:
Alignm length: 197
Alignm identity: 121
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 33, 28

Conread position: 5-212
Cow position:
Alignm length: 210
Alignm identity: 164
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 34, 28

Conread position: 5-213
Cow position:
Alignm length: 210
Alignm identity: 169
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 26

Conread position: 5-214
Cow position:
Alignm length: 211
Alignm identity: 168
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 34, 28

Conread position: 5-214
Cow position:
Alignm length: 211
Alignm identity: 171
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 28

Conread position: 5-215
Cow position:
Alignm length: 212
Alignm identity: 169
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 27

Conread position: 5-222
Cow position:
Alignm length: 219
Alignm identity: 176
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 28

Conread position: 6-137
Cow position:
Alignm length: 133
Alignm identity: 109
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 33, 27

Conread position: 6-161
Cow position:
Alignm length: 157
Alignm identity: 127
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 33, 27

Conread position: 6-165
Cow position:
Alignm length: 161
Alignm identity: 133
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 33, 27

Conread position: 6-174
Cow position:
Alignm length: 170
Alignm identity: 131
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 33, 27

Conread position: 6-203
Cow position:
Alignm length: 202
Alignm identity: 153
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 144, 175

Conread position: 6-203
Cow position:
Alignm length: 199
Alignm identity: 164
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 27

Conread position: 6-206
Cow position:
Alignm length: 205
Alignm identity: 164
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 17, 28

Conread position: 6-211
Cow position:
Alignm length: 207
Alignm identity: 160
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 33, 27

Conread position: 6-211
Cow position:
Alignm length: 207
Alignm identity: 166
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 27

Conread position: 6-213
Cow position:
Alignm length: 209
Alignm identity: 157
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 33, 26

Conread position: 6-213
Cow position:
Alignm length: 209
Alignm identity: 164
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 33, 27

Conread position: 6-214
Cow position:
Alignm length: 210
Alignm identity: 164
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 33, 27

Conread position: 6-214
Cow position:
Alignm length: 210
Alignm identity: 161
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 33, 27

Conread position: 6-214
Cow position:
Alignm length: 210
Alignm identity: 170
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 27

Conread position: 6-215
Cow position:
Alignm length: 212
Alignm identity: 157
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 33, 27

Conread position: 6-215
Cow position:
Alignm length: 211
Alignm identity: 174
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 27

Conread position: 6-215
Cow position:
Alignm length: 211
Alignm identity: 168
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 27

Conread position: 6-215
Cow position:
Alignm length: 211
Alignm identity: 163
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 33, 27

Conread position: 6-215
Cow position:
Alignm length: 211
Alignm identity: 168
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 26

Conread position: 6-215
Cow position:
Alignm length: 211
Alignm identity: 165
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 41, 27

Conread position: 6-215
Cow position:
Alignm length: 212
Alignm identity: 172
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 27

Conread position: 6-215
Cow position:
Alignm length: 211
Alignm identity: 176
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 25

Conread position: 6-216
Cow position:
Alignm length: 212
Alignm identity: 168
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 25

Conread position: 6-216
Cow position:
Alignm length: 212
Alignm identity: 175
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 27

Conread position: 6-216
Cow position:
Alignm length: 215
Alignm identity: 162
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 33, 27

Conread position: 6-217
Cow position:
Alignm length: 219
Alignm identity: 173
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 33, 27

Conread position: 6-217
Cow position:
Alignm length: 214
Alignm identity: 171
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 27

Conread position: 6-217
Cow position:
Alignm length: 213
Alignm identity: 168
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 33, 27

Conread position: 6-223
Cow position:
Alignm length: 220
Alignm identity: 177
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 27

Conread position: 6-236
Cow position:
Alignm length: 232
Alignm identity: 178
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 223, 91

Conread position: 7-169
Cow position:
Alignm length: 164
Alignm identity: 136
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 32, 26

Conread position: 7-211
Cow position:
Alignm length: 206
Alignm identity: 164
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 26

Conread position: 7-212
Cow position:
Alignm length: 207
Alignm identity: 161
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 32, 26

Conread position: 7-213
Cow position:
Alignm length: 210
Alignm identity: 160
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 36, 28

Conread position: 7-214
Cow position:
Alignm length: 209
Alignm identity: 159
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 32, 26

Conread position: 7-214
Cow position:
Alignm length: 210
Alignm identity: 171
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 27

Conread position: 7-216
Cow position:
Alignm length: 211
Alignm identity: 169
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 26

Conread position: 7-216
Cow position:
Alignm length: 211
Alignm identity: 162
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 32, 25

Conread position: 7-227
Cow position:
Alignm length: 221
Alignm identity: 171
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 8, 0

Conread position: 8-181
Cow position:
Alignm length: 178
Alignm identity: 144
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 31, 25

Conread position: 8-192
Cow position:
Alignm length: 185
Alignm identity: 142
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 93, 0

Conread position: 8-212
Cow position:
Alignm length: 206
Alignm identity: 169
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 25

Conread position: 8-214
Cow position:
Alignm length: 210
Alignm identity: 164
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 31, 25

Conread position: 8-215
Cow position:
Alignm length: 211
Alignm identity: 158
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 31, 26

Conread position: 8-215
Cow position:
Alignm length: 209
Alignm identity: 173
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 25

Conread position: 8-218
Cow position:
Alignm length: 213
Alignm identity: 172
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 25

Conread position: 9-168
Cow position:
Alignm length: 160
Alignm identity: 127
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 137, 0

Conread position: 9-169
Cow position:
Alignm length: 162
Alignm identity: 136
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 30, 24

Conread position: 9-189
Cow position:
Alignm length: 182
Alignm identity: 143
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 30, 24

Conread position: 9-196
Cow position:
Alignm length: 188
Alignm identity: 145
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 168, 0

Conread position: 9-217
Cow position:
Alignm length: 210
Alignm identity: 164
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 30, 24

Conread position: 10-124
Cow position:
Alignm length: 116
Alignm identity: 92
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 79, 103

Conread position: 10-132
Cow position:
Alignm length: 124
Alignm identity: 100
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 29, 23

Conread position: 10-170
Cow position:
Alignm length: 162
Alignm identity: 131
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 12, 23

Conread position: 10-182
Cow position:
Alignm length: 174
Alignm identity: 138
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 29, 23

Conread position: 10-198
Cow position:
Alignm length: 190
Alignm identity: 151
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 29, 23

Conread position: 10-214
Cow position:
Alignm length: 206
Alignm identity: 171
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 23

Conread position: 10-216
Cow position:
Alignm length: 209
Alignm identity: 159
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 34, 7

Conread position: 10-221
Cow position:
Alignm length: 212
Alignm identity: 164
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 23, 0

Conread position: 11-219
Cow position:
Alignm length: 211
Alignm identity: 163
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 28, 22

Conread position: 12-131
Cow position:
Alignm length: 121
Alignm identity: 98
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 100, 0

Conread position: 13-174
Cow position:
Alignm length: 163
Alignm identity: 133
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 26, 20

Conread position: 13-211
Cow position:
Alignm length: 209
Alignm identity: 171
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 20

Conread position: 13-214
Cow position:
Alignm length: 204
Alignm identity: 165
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 20

Conread position: 15-170
Cow position:
Alignm length: 157
Alignm identity: 126
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 24, 18

Conread position: 16-214
Cow position:
Alignm length: 200
Alignm identity: 153
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 35, 20

Conread position: 20-170
Cow position:
Alignm length: 152
Alignm identity: 121
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 20, 13

Conread position: 39-247
Cow position:
Alignm length: 210
Alignm identity: 158
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 99, 140

Show alignments to all cow chromosomes.