Cow genome map


           Conread name:
           unkn-SGD602702291.R1
        

               Conread position:
               1-126
               

               Cow position:
               
               

               Alignm length:
               126
               

               Alignm identity:
               98
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               57, 0
               

               Conread position:
               1-205
               

               Cow position:
               
               

               Alignm length:
               207
               

               Alignm identity:
               166
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 33
               

               Conread position:
               1-205
               

               Cow position:
               
               

               Alignm length:
               206
               

               Alignm identity:
               163
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               38, 32
               

               Conread position:
               1-213
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               158
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               1-219
               

               Cow position:
               
               

               Alignm length:
               221
               

               Alignm identity:
               182
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               38, 32
               

               Conread position:
               1-222
               

               Cow position:
               
               

               Alignm length:
               224
               

               Alignm identity:
               185
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               38, 32
               

               Conread position:
               2-175
               

               Cow position:
               
               

               Alignm length:
               176
               

               Alignm identity:
               134
               

               Alignm E-value:
               8e-32
               

               Alignm gaps (pig, cow):
               9, 32
               

               Conread position:
               2-207
               

               Cow position:
               
               

               Alignm length:
               206
               

               Alignm identity:
               159
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               195, 0
               

               Conread position:
               2-211
               

               Cow position:
               
               

               Alignm length:
               211
               

               Alignm identity:
               161
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               37, 26
               

               Conread position:
               2-213
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               171
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 31
               

               Conread position:
               2-214
               

               Cow position:
               
               

               Alignm length:
               223
               

               Alignm identity:
               179
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 31
               

               Conread position:
               2-216
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               166
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               37, 31
               

               Conread position:
               2-230
               

               Cow position:
               
               

               Alignm length:
               234
               

               Alignm identity:
               175
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               37, 31
               

               Conread position:
               3-121
               

               Cow position:
               
               

               Alignm length:
               120
               

               Alignm identity:
               103
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               36, 30
               

               Conread position:
               3-132
               

               Cow position:
               
               

               Alignm length:
               131
               

               Alignm identity:
               102
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               36, 30
               

               Conread position:
               3-134
               

               Cow position:
               
               

               Alignm length:
               133
               

               Alignm identity:
               111
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               34, 30
               

               Conread position:
               3-149
               

               Cow position:
               
               

               Alignm length:
               148
               

               Alignm identity:
               127
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               36, 30
               

               Conread position:
               3-169
               

               Cow position:
               
               

               Alignm length:
               168
               

               Alignm identity:
               137
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               36, 30
               

               Conread position:
               3-171
               

               Cow position:
               
               

               Alignm length:
               169
               

               Alignm identity:
               137
               

               Alignm E-value:
               7.00005e-41
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               3-194
               

               Cow position:
               
               

               Alignm length:
               195
               

               Alignm identity:
               144
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               36, 9
               

               Conread position:
               3-198
               

               Cow position:
               
               

               Alignm length:
               197
               

               Alignm identity:
               159
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 30
               

               Conread position:
               3-205
               

               Cow position:
               
               

               Alignm length:
               204
               

               Alignm identity:
               166
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               42, 30
               

               Conread position:
               3-212
               

               Cow position:
               
               

               Alignm length:
               211
               

               Alignm identity:
               167
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 30
               

               Conread position:
               3-213
               

               Cow position:
               
               

               Alignm length:
               212
               

               Alignm identity:
               170
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 30
               

               Conread position:
               3-214
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               177
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 30
               

               Conread position:
               3-214
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               172
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 31
               

               Conread position:
               3-214
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               169
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 30
               

               Conread position:
               3-215
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               169
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 30
               

               Conread position:
               3-215
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               168
               

               Alignm E-value:
               4.2039e-45
               

               Alignm gaps (pig, cow):
               36, 30
               

               Conread position:
               3-215
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               166
               

               Alignm E-value:
               4.2039e-45
               

               Alignm gaps (pig, cow):
               36, 30
               

               Conread position:
               3-215
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               168
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 30
               

               Conread position:
               3-215
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               167
               

               Alignm E-value:
               4.2039e-45
               

               Alignm gaps (pig, cow):
               35, 30
               

               Conread position:
               3-216
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               175
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 30
               

               Conread position:
               3-216
               

               Cow position:
               
               

               Alignm length:
               218
               

               Alignm identity:
               171
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               36, 30
               

               Conread position:
               3-216
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               173
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 30
               

               Conread position:
               3-217
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               173
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 30
               

               Conread position:
               3-218
               

               Cow position:
               
               

               Alignm length:
               220
               

               Alignm identity:
               161
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               36, 30
               

               Conread position:
               3-218
               

               Cow position:
               
               

               Alignm length:
               217
               

               Alignm identity:
               168
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               36, 24
               

               Conread position:
               3-220
               

               Cow position:
               
               

               Alignm length:
               219
               

               Alignm identity:
               169
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               36, 30
               

               Conread position:
               3-221
               

               Cow position:
               
               

               Alignm length:
               221
               

               Alignm identity:
               174
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 31
               

               Conread position:
               3-224
               

               Cow position:
               
               

               Alignm length:
               224
               

               Alignm identity:
               172
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               36, 30
               

               Conread position:
               3-224
               

               Cow position:
               
               

               Alignm length:
               229
               

               Alignm identity:
               178
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               36, 12
               

               Conread position:
               3-230
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               186
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 30
               

               Conread position:
               3-242
               

               Cow position:
               
               

               Alignm length:
               243
               

               Alignm identity:
               191
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 30
               

               Conread position:
               4-169
               

               Cow position:
               
               

               Alignm length:
               172
               

               Alignm identity:
               137
               

               Alignm E-value:
               9e-33
               

               Alignm gaps (pig, cow):
               35, 29
               

               Conread position:
               4-212
               

               Cow position:
               
               

               Alignm length:
               210
               

               Alignm identity:
               166
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               40, 29
               

               Conread position:
               4-215
               

               Cow position:
               
               

               Alignm length:
               221
               

               Alignm identity:
               166
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               171, 111
               

               Conread position:
               4-219
               

               Cow position:
               
               

               Alignm length:
               217
               

               Alignm identity:
               168
               

               Alignm E-value:
               6e-39
               

               Alignm gaps (pig, cow):
               35, 29
               

               Conread position:
               4-225
               

               Cow position:
               
               

               Alignm length:
               223
               

               Alignm identity:
               171
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               35, 28
               

               Conread position:
               5-162
               

               Cow position:
               
               

               Alignm length:
               159
               

               Alignm identity:
               126
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               42, 28
               

               Conread position:
               5-177
               

               Cow position:
               
               

               Alignm length:
               173
               

               Alignm identity:
               135
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               5-217
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               171
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 28
               

               Conread position:
               6-151
               

               Cow position:
               
               

               Alignm length:
               147
               

               Alignm identity:
               116
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               33, 27
               

               Conread position:
               6-166
               

               Cow position:
               
               

               Alignm length:
               162
               

               Alignm identity:
               137
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               33, 27
               

               Conread position:
               6-212
               

               Cow position:
               
               

               Alignm length:
               208
               

               Alignm identity:
               156
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               125, 49
               

               Conread position:
               6-215
               

               Cow position:
               
               

               Alignm length:
               210
               

               Alignm identity:
               165
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               141, 0
               

               Conread position:
               6-215
               

               Cow position:
               
               

               Alignm length:
               212
               

               Alignm identity:
               165
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               33, 27
               

               Conread position:
               6-215
               

               Cow position:
               
               

               Alignm length:
               210
               

               Alignm identity:
               156
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               67, 0
               

               Conread position:
               6-215
               

               Cow position:
               
               

               Alignm length:
               211
               

               Alignm identity:
               167
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 25
               

               Conread position:
               6-215
               

               Cow position:
               
               

               Alignm length:
               211
               

               Alignm identity:
               168
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 25
               

               Conread position:
               6-215
               

               Cow position:
               
               

               Alignm length:
               212
               

               Alignm identity:
               171
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 27
               

               Conread position:
               6-216
               

               Cow position:
               
               

               Alignm length:
               212
               

               Alignm identity:
               169
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 27
               

               Conread position:
               6-216
               

               Cow position:
               
               

               Alignm length:
               212
               

               Alignm identity:
               171
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 28
               

               Conread position:
               6-216
               

               Cow position:
               
               

               Alignm length:
               212
               

               Alignm identity:
               175
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 27
               

               Conread position:
               6-217
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               157
               

               Alignm E-value:
               9e-33
               

               Alignm gaps (pig, cow):
               33, 27
               

               Conread position:
               6-217
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               172
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 27
               

               Conread position:
               6-218
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               162
               

               Alignm E-value:
               8.99634e-43
               

               Alignm gaps (pig, cow):
               114, 0
               

               Conread position:
               6-219
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               169
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 27
               

               Conread position:
               6-235
               

               Cow position:
               
               

               Alignm length:
               231
               

               Alignm identity:
               183
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 27
               

               Conread position:
               7-131
               

               Cow position:
               
               

               Alignm length:
               126
               

               Alignm identity:
               99
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               32, 21
               

               Conread position:
               7-131
               

               Cow position:
               
               

               Alignm length:
               126
               

               Alignm identity:
               101
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               32, 27
               

               Conread position:
               7-137
               

               Cow position:
               
               

               Alignm length:
               132
               

               Alignm identity:
               109
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               32, 26
               

               Conread position:
               7-137
               

               Cow position:
               
               

               Alignm length:
               132
               

               Alignm identity:
               111
               

               Alignm E-value:
               8e-32
               

               Alignm gaps (pig, cow):
               31, 26
               

               Conread position:
               7-183
               

               Cow position:
               
               

               Alignm length:
               178
               

               Alignm identity:
               143
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               32, 28
               

               Conread position:
               7-207
               

               Cow position:
               
               

               Alignm length:
               202
               

               Alignm identity:
               157
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               32, 26
               

               Conread position:
               7-212
               

               Cow position:
               
               

               Alignm length:
               207
               

               Alignm identity:
               171
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 26
               

               Conread position:
               7-213
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               165
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               32, 26
               

               Conread position:
               7-215
               

               Cow position:
               
               

               Alignm length:
               210
               

               Alignm identity:
               165
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               32, 26
               

               Conread position:
               7-215
               

               Cow position:
               
               

               Alignm length:
               210
               

               Alignm identity:
               162
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               32, 26
               

               Conread position:
               7-215
               

               Cow position:
               
               

               Alignm length:
               210
               

               Alignm identity:
               167
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 26
               

               Conread position:
               7-215
               

               Cow position:
               
               

               Alignm length:
               210
               

               Alignm identity:
               167
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 26
               

               Conread position:
               7-216
               

               Cow position:
               
               

               Alignm length:
               211
               

               Alignm identity:
               165
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               32, 24
               

               Conread position:
               7-217
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               164
               

               Alignm E-value:
               8.99634e-43
               

               Alignm gaps (pig, cow):
               32, 26
               

               Conread position:
               7-218
               

               Cow position:
               
               

               Alignm length:
               212
               

               Alignm identity:
               160
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               170, 0
               

               Conread position:
               7-219
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               178
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               31, 26
               

               Conread position:
               7-224
               

               Cow position:
               
               

               Alignm length:
               219
               

               Alignm identity:
               165
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               211, 161
               

               Conread position:
               8-136
               

               Cow position:
               
               

               Alignm length:
               129
               

               Alignm identity:
               100
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               65, 0
               

               Conread position:
               8-204
               

               Cow position:
               
               

               Alignm length:
               198
               

               Alignm identity:
               156
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               31, 25
               

               Conread position:
               8-211
               

               Cow position:
               
               

               Alignm length:
               205
               

               Alignm identity:
               166
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               30, 25
               

               Conread position:
               9-214
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               167
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               30, 24
               

               Conread position:
               9-215
               

               Cow position:
               
               

               Alignm length:
               207
               

               Alignm identity:
               156
               

               Alignm E-value:
               7.00005e-41
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               10-131
               

               Cow position:
               
               

               Alignm length:
               123
               

               Alignm identity:
               103
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               29, 23
               

               Conread position:
               10-132
               

               Cow position:
               
               

               Alignm length:
               124
               

               Alignm identity:
               100
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               47, 5
               

               Conread position:
               10-148
               

               Cow position:
               
               

               Alignm length:
               140
               

               Alignm identity:
               106
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               46, 23
               

               Conread position:
               10-215
               

               Cow position:
               
               

               Alignm length:
               208
               

               Alignm identity:
               153
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               29, 22
               

               Conread position:
               10-240
               

               Cow position:
               
               

               Alignm length:
               232
               

               Alignm identity:
               184
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               29, 24
               

               Conread position:
               15-130
               

               Cow position:
               
               

               Alignm length:
               117
               

               Alignm identity:
               97
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               32, 18
               

               Conread position:
               20-209
               

               Cow position:
               
               

               Alignm length:
               199
               

               Alignm identity:
               151
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               64, 131
               

               Conread position:
               20-216
               

               Cow position:
               
               

               Alignm length:
               200
               

               Alignm identity:
               162
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 13
               

               Conread position:
               29-130
               

               Cow position:
               
               

               Alignm length:
               102
               

               Alignm identity:
               85
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               29-167
               

               Cow position:
               
               

               Alignm length:
               140
               

               Alignm identity:
               111
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               69, 0
               

               Conread position:
               78-220
               

               Cow position:
               
               

               Alignm length:
               144
               

               Alignm identity:
               116
               

               Alignm E-value:
               7e-31
               

               Alignm gaps (pig, cow):
               119, 100
               
Show alignments to all cow chromosomes.