Cow genome map
Conread name: | unkn-SGD602702291.R1 |
Conread position: | 1-151 |
Cow position: | chr5:47896549-47896399 (view UCSC Genome Browser custom track) |
Alignm length: | 152 |
Alignm identity: | 122 |
Alignm E-value: | 1e-32 |
Alignm gaps (pig, cow): | 38, 32 |
Conread position: | 1-197 |
Cow position: | chr5:54685082-54685274 (view UCSC Genome Browser custom track) |
Alignm length: | 198 |
Alignm identity: | 156 |
Alignm E-value: | 2e-40 |
Alignm gaps (pig, cow): | 38, 32 |
Conread position: | 1-215 |
Cow position: | chr5:25584515-25584720 (view UCSC Genome Browser custom track) |
Alignm length: | 216 |
Alignm identity: | 171 |
Alignm E-value: | 2.94273e-44 |
Alignm gaps (pig, cow): | 38, 32 |
Conread position: | 1-215 |
Cow position: | chr5:61858475-61858261 (view UCSC Genome Browser custom track) |
Alignm length: | 217 |
Alignm identity: | 168 |
Alignm E-value: | 9.94922e-44 |
Alignm gaps (pig, cow): | 38, 31 |
Conread position: | 2-170 |
Cow position: | chr5:8803316-8803148 (view UCSC Genome Browser custom track) |
Alignm length: | 170 |
Alignm identity: | 138 |
Alignm E-value: | 2e-39 |
Alignm gaps (pig, cow): | 37, 31 |
Conread position: | 2-194 |
Cow position: | chr5:32376122-32375940 (view UCSC Genome Browser custom track) |
Alignm length: | 194 |
Alignm identity: | 148 |
Alignm E-value: | 9e-32 |
Alignm gaps (pig, cow): | 37, 31 |
Conread position: | 2-214 |
Cow position: | chr5:10106633-10106437 (view UCSC Genome Browser custom track) |
Alignm length: | 214 |
Alignm identity: | 159 |
Alignm E-value: | 2e-29 |
Alignm gaps (pig, cow): | 37, 31 |
Conread position: | 2-215 |
Cow position: | chr5:46640768-46640555 (view UCSC Genome Browser custom track) |
Alignm length: | 215 |
Alignm identity: | 174 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 37, 30 |
Conread position: | 2-217 |
Cow position: | chr5:1130204-1129995 (view UCSC Genome Browser custom track) |
Alignm length: | 217 |
Alignm identity: | 170 |
Alignm E-value: | 2.99878e-43 |
Alignm gaps (pig, cow): | 37, 31 |
Conread position: | 3-137 |
Cow position: | chr5:75220985-75220850 (view UCSC Genome Browser custom track) |
Alignm length: | 137 |
Alignm identity: | 108 |
Alignm E-value: | 1e-25 |
Alignm gaps (pig, cow): | 41, 30 |
Conread position: | 3-178 |
Cow position: | chr5:10745123-10745298 (view UCSC Genome Browser custom track) |
Alignm length: | 177 |
Alignm identity: | 141 |
Alignm E-value: | 6e-39 |
Alignm gaps (pig, cow): | 36, 30 |
Conread position: | 3-205 |
Cow position: | chr5:3032332-3032133 (view UCSC Genome Browser custom track) |
Alignm length: | 204 |
Alignm identity: | 165 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 36, 30 |
Conread position: | 3-211 |
Cow position: | chr5:70940229-70940440 (view UCSC Genome Browser custom track) |
Alignm length: | 213 |
Alignm identity: | 173 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 36, 30 |
Conread position: | 3-213 |
Cow position: | chr5:4239844-4239634 (view UCSC Genome Browser custom track) |
Alignm length: | 213 |
Alignm identity: | 163 |
Alignm E-value: | 8.00001e-41 |
Alignm gaps (pig, cow): | 36, 30 |
Conread position: | 3-213 |
Cow position: | chr5:26894911-26894704 (view UCSC Genome Browser custom track) |
Alignm length: | 211 |
Alignm identity: | 164 |
Alignm E-value: | 2.94273e-44 |
Alignm gaps (pig, cow): | 159, 0 |
Conread position: | 3-214 |
Cow position: | chr5:27893304-27893515 (view UCSC Genome Browser custom track) |
Alignm length: | 213 |
Alignm identity: | 166 |
Alignm E-value: | 1.4013e-45 |
Alignm gaps (pig, cow): | 36, 30 |
Conread position: | 3-214 |
Cow position: | chr5:43413437-43413648 (view UCSC Genome Browser custom track) |
Alignm length: | 213 |
Alignm identity: | 172 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 36, 30 |
Conread position: | 3-215 |
Cow position: | chr5:4419533-4419744 (view UCSC Genome Browser custom track) |
Alignm length: | 214 |
Alignm identity: | 170 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 157, 92 |
Conread position: | 3-215 |
Cow position: | chr5:18533784-18533572 (view UCSC Genome Browser custom track) |
Alignm length: | 215 |
Alignm identity: | 166 |
Alignm E-value: | 8.99634e-43 |
Alignm gaps (pig, cow): | 13, 31 |
Conread position: | 3-215 |
Cow position: | chr5:30872221-30872440 (view UCSC Genome Browser custom track) |
Alignm length: | 222 |
Alignm identity: | 169 |
Alignm E-value: | 6e-39 |
Alignm gaps (pig, cow): | 36, 14 |
Conread position: | 3-215 |
Cow position: | chr5:55317714-55317926 (view UCSC Genome Browser custom track) |
Alignm length: | 215 |
Alignm identity: | 177 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 36, 30 |
Conread position: | 3-215 |
Cow position: | chr5:74524670-74524881 (view UCSC Genome Browser custom track) |
Alignm length: | 214 |
Alignm identity: | 168 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 36, 30 |
Conread position: | 3-216 |
Cow position: | chr5:3075226-3075433 (view UCSC Genome Browser custom track) |
Alignm length: | 216 |
Alignm identity: | 169 |
Alignm E-value: | 8.00001e-42 |
Alignm gaps (pig, cow): | 36, 30 |
Conread position: | 3-216 |
Cow position: | chr5:23252505-23252292 (view UCSC Genome Browser custom track) |
Alignm length: | 215 |
Alignm identity: | 178 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 36, 30 |
Conread position: | 3-216 |
Cow position: | chr5:27045977-27045767 (view UCSC Genome Browser custom track) |
Alignm length: | 215 |
Alignm identity: | 155 |
Alignm E-value: | 3e-32 |
Alignm gaps (pig, cow): | 36, 29 |
Conread position: | 3-216 |
Cow position: | chr5:37740243-37740030 (view UCSC Genome Browser custom track) |
Alignm length: | 215 |
Alignm identity: | 163 |
Alignm E-value: | 8.00001e-42 |
Alignm gaps (pig, cow): | 36, 30 |
Conread position: | 3-216 |
Cow position: | chr5:54535059-54535272 (view UCSC Genome Browser custom track) |
Alignm length: | 215 |
Alignm identity: | 168 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 36, 30 |
Conread position: | 3-216 |
Cow position: | chr5:55335209-55335421 (view UCSC Genome Browser custom track) |
Alignm length: | 217 |
Alignm identity: | 174 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 36, 30 |
Conread position: | 3-216 |
Cow position: | chr5:57310675-57310888 (view UCSC Genome Browser custom track) |
Alignm length: | 216 |
Alignm identity: | 172 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 36, 30 |
Conread position: | 3-216 |
Cow position: | chr5:60131814-60131602 (view UCSC Genome Browser custom track) |
Alignm length: | 215 |
Alignm identity: | 177 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 36, 30 |
Conread position: | 3-216 |
Cow position: | chr5:70840754-70840967 (view UCSC Genome Browser custom track) |
Alignm length: | 215 |
Alignm identity: | 175 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 48, 30 |
Conread position: | 3-217 |
Cow position: | chr5:48780782-48780996 (view UCSC Genome Browser custom track) |
Alignm length: | 218 |
Alignm identity: | 174 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 36, 12 |
Conread position: | 3-221 |
Cow position: | chr5:38255313-38255095 (view UCSC Genome Browser custom track) |
Alignm length: | 220 |
Alignm identity: | 181 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 42, 29 |
Conread position: | 3-222 |
Cow position: | chr5:23270883-23271101 (view UCSC Genome Browser custom track) |
Alignm length: | 221 |
Alignm identity: | 170 |
Alignm E-value: | 9.80909e-45 |
Alignm gaps (pig, cow): | 36, 30 |
Conread position: | 3-222 |
Cow position: | chr5:34291125-34290906 (view UCSC Genome Browser custom track) |
Alignm length: | 221 |
Alignm identity: | 181 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 35, 30 |
Conread position: | 3-222 |
Cow position: | chr5:40896932-40896714 (view UCSC Genome Browser custom track) |
Alignm length: | 221 |
Alignm identity: | 167 |
Alignm E-value: | 8.00001e-42 |
Alignm gaps (pig, cow): | 36, 30 |
Conread position: | 4-171 |
Cow position: | chr5:3580707-3580874 (view UCSC Genome Browser custom track) |
Alignm length: | 169 |
Alignm identity: | 136 |
Alignm E-value: | 6e-38 |
Alignm gaps (pig, cow): | 36, 29 |
Conread position: | 4-229 |
Cow position: | chr5:44513478-44513700 (view UCSC Genome Browser custom track) |
Alignm length: | 227 |
Alignm identity: | 172 |
Alignm E-value: | 8.00001e-42 |
Alignm gaps (pig, cow): | 35, 29 |
Conread position: | 5-162 |
Cow position: | chr5:9085255-9085099 (view UCSC Genome Browser custom track) |
Alignm length: | 159 |
Alignm identity: | 134 |
Alignm E-value: | 7e-40 |
Alignm gaps (pig, cow): | 34, 28 |
Conread position: | 5-214 |
Cow position: | chr5:12593741-12593944 (view UCSC Genome Browser custom track) |
Alignm length: | 211 |
Alignm identity: | 162 |
Alignm E-value: | 2e-39 |
Alignm gaps (pig, cow): | 34, 28 |
Conread position: | 5-215 |
Cow position: | chr5:17897996-17897786 (view UCSC Genome Browser custom track) |
Alignm length: | 212 |
Alignm identity: | 167 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 34, 28 |
Conread position: | 5-215 |
Cow position: | chr5:43999537-43999747 (view UCSC Genome Browser custom track) |
Alignm length: | 212 |
Alignm identity: | 170 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 34, 28 |
Conread position: | 5-217 |
Cow position: | chr5:43993530-43993742 (view UCSC Genome Browser custom track) |
Alignm length: | 214 |
Alignm identity: | 177 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 34, 28 |
Conread position: | 5-227 |
Cow position: | chr5:13760165-13759945 (view UCSC Genome Browser custom track) |
Alignm length: | 224 |
Alignm identity: | 176 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 34, 28 |
Conread position: | 6-181 |
Cow position: | chr5:32283272-32283097 (view UCSC Genome Browser custom track) |
Alignm length: | 177 |
Alignm identity: | 138 |
Alignm E-value: | 4e-36 |
Alignm gaps (pig, cow): | 33, 27 |
Conread position: | 6-211 |
Cow position: | chr5:9429588-9429383 (view UCSC Genome Browser custom track) |
Alignm length: | 207 |
Alignm identity: | 162 |
Alignm E-value: | 9.80909e-45 |
Alignm gaps (pig, cow): | 33, 27 |
Conread position: | 6-212 |
Cow position: | chr5:8805380-8805583 (view UCSC Genome Browser custom track) |
Alignm length: | 208 |
Alignm identity: | 156 |
Alignm E-value: | 1e-35 |
Alignm gaps (pig, cow): | 32, 28 |
Conread position: | 6-213 |
Cow position: | chr5:33924488-33924696 (view UCSC Genome Browser custom track) |
Alignm length: | 210 |
Alignm identity: | 174 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 33, 27 |
Conread position: | 6-214 |
Cow position: | chr5:24655359-24655566 (view UCSC Genome Browser custom track) |
Alignm length: | 210 |
Alignm identity: | 167 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 33, 27 |
Conread position: | 6-214 |
Cow position: | chr5:52198541-52198749 (view UCSC Genome Browser custom track) |
Alignm length: | 210 |
Alignm identity: | 172 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 33, 27 |
Conread position: | 6-214 |
Cow position: | chr5:59958861-59959068 (view UCSC Genome Browser custom track) |
Alignm length: | 210 |
Alignm identity: | 168 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 33, 27 |
Conread position: | 6-216 |
Cow position: | chr5:44667776-44667566 (view UCSC Genome Browser custom track) |
Alignm length: | 212 |
Alignm identity: | 170 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 136, 142 |
Conread position: | 6-216 |
Cow position: | chr5:51093439-51093649 (view UCSC Genome Browser custom track) |
Alignm length: | 212 |
Alignm identity: | 167 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 148, 167 |
Conread position: | 6-216 |
Cow position: | chr5:63047862-63048074 (view UCSC Genome Browser custom track) |
Alignm length: | 215 |
Alignm identity: | 168 |
Alignm E-value: | 8.99634e-43 |
Alignm gaps (pig, cow): | 8, 28 |
Conread position: | 6-217 |
Cow position: | chr5:18001907-18001695 (view UCSC Genome Browser custom track) |
Alignm length: | 215 |
Alignm identity: | 173 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 33, 27 |
Conread position: | 6-217 |
Cow position: | chr5:28654068-28653858 (view UCSC Genome Browser custom track) |
Alignm length: | 213 |
Alignm identity: | 163 |
Alignm E-value: | 8.00001e-42 |
Alignm gaps (pig, cow): | 41, 27 |
Conread position: | 6-217 |
Cow position: | chr5:45423987-45424194 (view UCSC Genome Browser custom track) |
Alignm length: | 212 |
Alignm identity: | 162 |
Alignm E-value: | 8.00001e-42 |
Alignm gaps (pig, cow): | 100, 0 |
Conread position: | 6-218 |
Cow position: | chr5:12692735-12692941 (view UCSC Genome Browser custom track) |
Alignm length: | 214 |
Alignm identity: | 166 |
Alignm E-value: | 3.00004e-41 |
Alignm gaps (pig, cow): | 33, 27 |
Conread position: | 6-219 |
Cow position: | chr5:18018274-18018486 (view UCSC Genome Browser custom track) |
Alignm length: | 216 |
Alignm identity: | 170 |
Alignm E-value: | 4.2039e-45 |
Alignm gaps (pig, cow): | 33, 27 |
Conread position: | 6-239 |
Cow position: | chr5:14296810-14296583 (view UCSC Genome Browser custom track) |
Alignm length: | 235 |
Alignm identity: | 180 |
Alignm E-value: | 9.80909e-45 |
Alignm gaps (pig, cow): | 33, 27 |
Conread position: | 7-171 |
Cow position: | chr5:59639871-59640035 (view UCSC Genome Browser custom track) |
Alignm length: | 166 |
Alignm identity: | 131 |
Alignm E-value: | 1e-34 |
Alignm gaps (pig, cow): | 32, 26 |
Conread position: | 7-174 |
Cow position: | chr5:67905765-67905599 (view UCSC Genome Browser custom track) |
Alignm length: | 169 |
Alignm identity: | 134 |
Alignm E-value: | 4e-35 |
Alignm gaps (pig, cow): | 32, 26 |
Conread position: | 7-203 |
Cow position: | chr5:67528206-67528402 (view UCSC Genome Browser custom track) |
Alignm length: | 198 |
Alignm identity: | 161 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 32, 26 |
Conread position: | 7-205 |
Cow position: | chr5:22390177-22389979 (view UCSC Genome Browser custom track) |
Alignm length: | 199 |
Alignm identity: | 160 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 7-214 |
Cow position: | chr5:57047026-57047235 (view UCSC Genome Browser custom track) |
Alignm length: | 211 |
Alignm identity: | 166 |
Alignm E-value: | 9.80909e-45 |
Alignm gaps (pig, cow): | 32, 26 |
Conread position: | 7-215 |
Cow position: | chr5:20045957-20046160 (view UCSC Genome Browser custom track) |
Alignm length: | 210 |
Alignm identity: | 167 |
Alignm E-value: | 9.80909e-45 |
Alignm gaps (pig, cow): | 32, 26 |
Conread position: | 7-215 |
Cow position: | chr5:54397023-54396815 (view UCSC Genome Browser custom track) |
Alignm length: | 210 |
Alignm identity: | 157 |
Alignm E-value: | 2e-38 |
Alignm gaps (pig, cow): | 32, 26 |
Conread position: | 7-216 |
Cow position: | chr5:18485123-18485335 (view UCSC Genome Browser custom track) |
Alignm length: | 214 |
Alignm identity: | 169 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 32, 26 |
Conread position: | 7-216 |
Cow position: | chr5:25447854-25447646 (view UCSC Genome Browser custom track) |
Alignm length: | 211 |
Alignm identity: | 161 |
Alignm E-value: | 8.00001e-41 |
Alignm gaps (pig, cow): | 40, 26 |
Conread position: | 7-216 |
Cow position: | chr5:67652511-67652303 (view UCSC Genome Browser custom track) |
Alignm length: | 211 |
Alignm identity: | 172 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 32, 26 |
Conread position: | 7-229 |
Cow position: | chr5:6033213-6033432 (view UCSC Genome Browser custom track) |
Alignm length: | 224 |
Alignm identity: | 162 |
Alignm E-value: | 4e-34 |
Alignm gaps (pig, cow): | 31, 26 |
Conread position: | 8-137 |
Cow position: | chr5:56883413-56883542 (view UCSC Genome Browser custom track) |
Alignm length: | 131 |
Alignm identity: | 103 |
Alignm E-value: | 1e-24 |
Alignm gaps (pig, cow): | 29, 25 |
Conread position: | 8-214 |
Cow position: | chr5:27080953-27081163 (view UCSC Genome Browser custom track) |
Alignm length: | 212 |
Alignm identity: | 169 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 31, 23 |
Conread position: | 8-214 |
Cow position: | chr5:59399380-59399182 (view UCSC Genome Browser custom track) |
Alignm length: | 208 |
Alignm identity: | 158 |
Alignm E-value: | 1e-34 |
Alignm gaps (pig, cow): | 31, 25 |
Conread position: | 8-215 |
Cow position: | chr5:72456882-72457089 (view UCSC Genome Browser custom track) |
Alignm length: | 210 |
Alignm identity: | 166 |
Alignm E-value: | 4.2039e-45 |
Alignm gaps (pig, cow): | 30, 25 |
Conread position: | 8-216 |
Cow position: | chr5:49603931-49604148 (view UCSC Genome Browser custom track) |
Alignm length: | 219 |
Alignm identity: | 172 |
Alignm E-value: | 8.99634e-43 |
Alignm gaps (pig, cow): | 31, 25 |
Conread position: | 9-211 |
Cow position: | chr5:14581152-14580947 (view UCSC Genome Browser custom track) |
Alignm length: | 213 |
Alignm identity: | 164 |
Alignm E-value: | 3e-32 |
Alignm gaps (pig, cow): | 30, 24 |
Conread position: | 9-215 |
Cow position: | chr5:9448262-9448058 (view UCSC Genome Browser custom track) |
Alignm length: | 209 |
Alignm identity: | 165 |
Alignm E-value: | 8.99634e-43 |
Alignm gaps (pig, cow): | 25, 17 |
Conread position: | 9-215 |
Cow position: | chr5:33169203-33169408 (view UCSC Genome Browser custom track) |
Alignm length: | 209 |
Alignm identity: | 166 |
Alignm E-value: | 9.80909e-45 |
Alignm gaps (pig, cow): | 30, 6 |
Conread position: | 9-216 |
Cow position: | chr5:76338500-76338712 (view UCSC Genome Browser custom track) |
Alignm length: | 216 |
Alignm identity: | 167 |
Alignm E-value: | 2e-39 |
Alignm gaps (pig, cow): | 30, 24 |
Conread position: | 9-219 |
Cow position: | chr5:35639177-35639388 (view UCSC Genome Browser custom track) |
Alignm length: | 214 |
Alignm identity: | 169 |
Alignm E-value: | 4.2039e-45 |
Alignm gaps (pig, cow): | 30, 24 |
Conread position: | 9-270 |
Cow position: | chr5:71151512-71151250 (view UCSC Genome Browser custom track) |
Alignm length: | 265 |
Alignm identity: | 205 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 30, 24 |
Conread position: | 10-131 |
Cow position: | chr5:43134520-43134399 (view UCSC Genome Browser custom track) |
Alignm length: | 122 |
Alignm identity: | 100 |
Alignm E-value: | 6e-28 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 10-149 |
Cow position: | chr5:69382129-69381991 (view UCSC Genome Browser custom track) |
Alignm length: | 140 |
Alignm identity: | 117 |
Alignm E-value: | 1e-34 |
Alignm gaps (pig, cow): | 91, 0 |
Conread position: | 11-216 |
Cow position: | chr5:30367913-30368118 (view UCSC Genome Browser custom track) |
Alignm length: | 207 |
Alignm identity: | 168 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 28, 22 |
Conread position: | 11-216 |
Cow position: | chr5:37890739-37890536 (view UCSC Genome Browser custom track) |
Alignm length: | 207 |
Alignm identity: | 165 |
Alignm E-value: | 1.4013e-45 |
Alignm gaps (pig, cow): | 28, 22 |
Conread position: | 15-227 |
Cow position: | chr5:41588111-41587900 (view UCSC Genome Browser custom track) |
Alignm length: | 214 |
Alignm identity: | 165 |
Alignm E-value: | 2.99878e-43 |
Alignm gaps (pig, cow): | 182, 19 |
Conread position: | 20-215 |
Cow position: | chr5:7072281-7072484 (view UCSC Genome Browser custom track) |
Alignm length: | 205 |
Alignm identity: | 160 |
Alignm E-value: | 6e-38 |
Alignm gaps (pig, cow): | 13, 18 |
Conread position: | 23-215 |
Cow position: | chr5:7412313-7412509 (view UCSC Genome Browser custom track) |
Alignm length: | 198 |
Alignm identity: | 156 |
Alignm E-value: | 2e-40 |
Alignm gaps (pig, cow): | 117, 158 |
Show alignments to all cow chromosomes.