Cow genome map

Conread name: unkn-SGD602702291.R1

Conread position: 1-142
Cow position:
Alignm length: 143
Alignm identity: 110
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 38, 31

Conread position: 1-155
Cow position:
Alignm length: 157
Alignm identity: 124
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 38, 14

Conread position: 1-181
Cow position:
Alignm length: 181
Alignm identity: 140
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 0, 0

Conread position: 1-210
Cow position:
Alignm length: 211
Alignm identity: 169
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 32

Conread position: 1-213
Cow position:
Alignm length: 214
Alignm identity: 172
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 32

Conread position: 1-213
Cow position:
Alignm length: 214
Alignm identity: 159
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 38, 32

Conread position: 1-214
Cow position:
Alignm length: 224
Alignm identity: 172
Alignm E-value: 7.00005e-41
Alignm gaps (pig, cow): 38, 32

Conread position: 1-215
Cow position:
Alignm length: 216
Alignm identity: 169
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 32

Conread position: 1-215
Cow position:
Alignm length: 218
Alignm identity: 171
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 38, 32

Conread position: 1-219
Cow position:
Alignm length: 228
Alignm identity: 177
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 38, 30

Conread position: 1-247
Cow position:
Alignm length: 248
Alignm identity: 184
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 37, 32

Conread position: 2-142
Cow position:
Alignm length: 142
Alignm identity: 114
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 37, 31

Conread position: 2-198
Cow position:
Alignm length: 199
Alignm identity: 155
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 37, 31

Conread position: 2-214
Cow position:
Alignm length: 213
Alignm identity: 174
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 2-214
Cow position:
Alignm length: 214
Alignm identity: 175
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 31

Conread position: 2-214
Cow position:
Alignm length: 215
Alignm identity: 166
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 37, 31

Conread position: 2-216
Cow position:
Alignm length: 215
Alignm identity: 170
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 0

Conread position: 3-117
Cow position:
Alignm length: 116
Alignm identity: 96
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 36, 29

Conread position: 3-133
Cow position:
Alignm length: 136
Alignm identity: 107
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 36, 30

Conread position: 3-134
Cow position:
Alignm length: 133
Alignm identity: 109
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 19, 31

Conread position: 3-135
Cow position:
Alignm length: 135
Alignm identity: 113
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 36, 30

Conread position: 3-142
Cow position:
Alignm length: 141
Alignm identity: 116
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 36, 30

Conread position: 3-168
Cow position:
Alignm length: 167
Alignm identity: 137
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 36, 32

Conread position: 3-180
Cow position:
Alignm length: 179
Alignm identity: 138
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 36, 12

Conread position: 3-191
Cow position:
Alignm length: 190
Alignm identity: 149
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 179, 0

Conread position: 3-192
Cow position:
Alignm length: 191
Alignm identity: 149
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 36, 30

Conread position: 3-193
Cow position:
Alignm length: 193
Alignm identity: 156
Alignm E-value: 8.99634e-43
Alignm gaps (pig, cow): 7, 29

Conread position: 3-198
Cow position:
Alignm length: 197
Alignm identity: 156
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 36, 8

Conread position: 3-198
Cow position:
Alignm length: 198
Alignm identity: 166
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 30

Conread position: 3-203
Cow position:
Alignm length: 202
Alignm identity: 163
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 30

Conread position: 3-205
Cow position:
Alignm length: 205
Alignm identity: 166
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 0

Conread position: 3-210
Cow position:
Alignm length: 209
Alignm identity: 171
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 24

Conread position: 3-212
Cow position:
Alignm length: 211
Alignm identity: 157
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 42, 30

Conread position: 3-212
Cow position:
Alignm length: 214
Alignm identity: 158
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 36, 30

Conread position: 3-212
Cow position:
Alignm length: 220
Alignm identity: 171
Alignm E-value: 7.00005e-41
Alignm gaps (pig, cow): 36, 30

Conread position: 3-214
Cow position:
Alignm length: 214
Alignm identity: 169
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 30

Conread position: 3-214
Cow position:
Alignm length: 213
Alignm identity: 163
Alignm E-value: 7.00005e-41
Alignm gaps (pig, cow): 36, 30

Conread position: 3-216
Cow position:
Alignm length: 216
Alignm identity: 170
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 29

Conread position: 3-216
Cow position:
Alignm length: 231
Alignm identity: 177
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 36, 30

Conread position: 3-217
Cow position:
Alignm length: 217
Alignm identity: 177
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 30

Conread position: 3-217
Cow position:
Alignm length: 218
Alignm identity: 175
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 30

Conread position: 3-217
Cow position:
Alignm length: 217
Alignm identity: 179
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 30

Conread position: 3-219
Cow position:
Alignm length: 219
Alignm identity: 166
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 36, 30

Conread position: 3-219
Cow position:
Alignm length: 218
Alignm identity: 163
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 36, 30

Conread position: 3-219
Cow position:
Alignm length: 218
Alignm identity: 176
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 30

Conread position: 3-222
Cow position:
Alignm length: 223
Alignm identity: 169
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 10, 34

Conread position: 3-224
Cow position:
Alignm length: 230
Alignm identity: 180
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 30

Conread position: 3-225
Cow position:
Alignm length: 224
Alignm identity: 173
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 36, 31

Conread position: 3-233
Cow position:
Alignm length: 232
Alignm identity: 183
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 30

Conread position: 3-234
Cow position:
Alignm length: 236
Alignm identity: 184
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 30

Conread position: 4-161
Cow position:
Alignm length: 159
Alignm identity: 122
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 35, 28

Conread position: 4-174
Cow position:
Alignm length: 171
Alignm identity: 134
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 60, 0

Conread position: 4-216
Cow position:
Alignm length: 214
Alignm identity: 164
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 35, 29

Conread position: 5-170
Cow position:
Alignm length: 168
Alignm identity: 137
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 34, 28

Conread position: 5-205
Cow position:
Alignm length: 203
Alignm identity: 160
Alignm E-value: 8.99634e-43
Alignm gaps (pig, cow): 34, 26

Conread position: 5-214
Cow position:
Alignm length: 211
Alignm identity: 159
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 34, 28

Conread position: 5-215
Cow position:
Alignm length: 215
Alignm identity: 162
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 34, 28

Conread position: 6-116
Cow position:
Alignm length: 111
Alignm identity: 95
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 6-171
Cow position:
Alignm length: 167
Alignm identity: 131
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 33, 25

Conread position: 6-171
Cow position:
Alignm length: 167
Alignm identity: 127
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 23, 33

Conread position: 6-180
Cow position:
Alignm length: 175
Alignm identity: 129
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 131, 0

Conread position: 6-198
Cow position:
Alignm length: 194
Alignm identity: 149
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 33, 27

Conread position: 6-205
Cow position:
Alignm length: 201
Alignm identity: 164
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 27

Conread position: 6-206
Cow position:
Alignm length: 202
Alignm identity: 156
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 33, 27

Conread position: 6-207
Cow position:
Alignm length: 207
Alignm identity: 159
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 33, 27

Conread position: 6-214
Cow position:
Alignm length: 210
Alignm identity: 161
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 36, 27

Conread position: 6-214
Cow position:
Alignm length: 210
Alignm identity: 164
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 33, 27

Conread position: 6-215
Cow position:
Alignm length: 210
Alignm identity: 161
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 112, 0

Conread position: 6-216
Cow position:
Alignm length: 212
Alignm identity: 164
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 33, 25

Conread position: 6-216
Cow position:
Alignm length: 212
Alignm identity: 167
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 33, 9

Conread position: 6-216
Cow position:
Alignm length: 223
Alignm identity: 184
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 28

Conread position: 6-216
Cow position:
Alignm length: 213
Alignm identity: 168
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 33, 27

Conread position: 6-218
Cow position:
Alignm length: 214
Alignm identity: 170
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 27

Conread position: 6-219
Cow position:
Alignm length: 215
Alignm identity: 165
Alignm E-value: 8.00001e-42
Alignm gaps (pig, cow): 136, 150

Conread position: 6-221
Cow position:
Alignm length: 217
Alignm identity: 169
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 0

Conread position: 6-221
Cow position:
Alignm length: 218
Alignm identity: 172
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 27

Conread position: 6-222
Cow position:
Alignm length: 226
Alignm identity: 175
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 32, 27

Conread position: 7-158
Cow position:
Alignm length: 153
Alignm identity: 125
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 25, 32

Conread position: 7-174
Cow position:
Alignm length: 169
Alignm identity: 138
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 43, 26

Conread position: 7-196
Cow position:
Alignm length: 191
Alignm identity: 157
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 32, 26

Conread position: 7-198
Cow position:
Alignm length: 201
Alignm identity: 150
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 50, 0

Conread position: 7-205
Cow position:
Alignm length: 202
Alignm identity: 160
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 13, 33

Conread position: 7-213
Cow position:
Alignm length: 208
Alignm identity: 165
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 26

Conread position: 7-214
Cow position:
Alignm length: 224
Alignm identity: 161
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 15, 21

Conread position: 7-215
Cow position:
Alignm length: 210
Alignm identity: 168
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 31, 26

Conread position: 7-216
Cow position:
Alignm length: 211
Alignm identity: 168
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 32, 26

Conread position: 7-216
Cow position:
Alignm length: 211
Alignm identity: 160
Alignm E-value: 7.00005e-41
Alignm gaps (pig, cow): 32, 25

Conread position: 7-218
Cow position:
Alignm length: 213
Alignm identity: 174
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 26

Conread position: 7-231
Cow position:
Alignm length: 226
Alignm identity: 170
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 32, 24

Conread position: 7-236
Cow position:
Alignm length: 242
Alignm identity: 180
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 32, 26

Conread position: 8-215
Cow position:
Alignm length: 210
Alignm identity: 162
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 31, 25

Conread position: 8-215
Cow position:
Alignm length: 209
Alignm identity: 166
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 25

Conread position: 8-216
Cow position:
Alignm length: 210
Alignm identity: 165
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 25

Conread position: 8-216
Cow position:
Alignm length: 211
Alignm identity: 159
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 31, 26

Conread position: 8-245
Cow position:
Alignm length: 238
Alignm identity: 174
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 169, 0

Conread position: 9-205
Cow position:
Alignm length: 198
Alignm identity: 159
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 30, 24

Conread position: 9-215
Cow position:
Alignm length: 208
Alignm identity: 168
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 24

Conread position: 9-215
Cow position:
Alignm length: 208
Alignm identity: 172
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 18

Conread position: 9-217
Cow position:
Alignm length: 220
Alignm identity: 170
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 30, 24

Conread position: 9-235
Cow position:
Alignm length: 228
Alignm identity: 174
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 133, 139

Conread position: 10-133
Cow position:
Alignm length: 125
Alignm identity: 104
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 36, 23

Conread position: 10-140
Cow position:
Alignm length: 132
Alignm identity: 108
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 29, 23

Conread position: 10-205
Cow position:
Alignm length: 206
Alignm identity: 165
Alignm E-value: 8.99634e-43
Alignm gaps (pig, cow): 74, 86

Conread position: 10-213
Cow position:
Alignm length: 206
Alignm identity: 164
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 23

Conread position: 10-217
Cow position:
Alignm length: 209
Alignm identity: 169
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 23

Conread position: 10-220
Cow position:
Alignm length: 212
Alignm identity: 165
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 28, 23

Conread position: 12-214
Cow position:
Alignm length: 204
Alignm identity: 163
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 21

Conread position: 13-124
Cow position:
Alignm length: 113
Alignm identity: 93
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 26, 17

Conread position: 16-221
Cow position:
Alignm length: 210
Alignm identity: 163
Alignm E-value: 7.00005e-41
Alignm gaps (pig, cow): 24, 13

Conread position: 17-144
Cow position:
Alignm length: 129
Alignm identity: 105
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 22, 16

Conread position: 20-215
Cow position:
Alignm length: 206
Alignm identity: 151
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 143, 113

Show alignments to all cow chromosomes.