Cow genome map


           Conread name:
           unkn-SGD602702291.R1
        

               Conread position:
               1-129
               

               Cow position:
               
               

               Alignm length:
               129
               

               Alignm identity:
               96
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-174
               

               Cow position:
               
               

               Alignm length:
               176
               

               Alignm identity:
               139
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               1-205
               

               Cow position:
               
               

               Alignm length:
               206
               

               Alignm identity:
               158
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               38, 14
               

               Conread position:
               1-206
               

               Cow position:
               
               

               Alignm length:
               207
               

               Alignm identity:
               164
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               37, 32
               

               Conread position:
               1-210
               

               Cow position:
               
               

               Alignm length:
               210
               

               Alignm identity:
               165
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               150, 0
               

               Conread position:
               1-210
               

               Cow position:
               
               

               Alignm length:
               210
               

               Alignm identity:
               166
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               159, 0
               

               Conread position:
               1-215
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               161
               

               Alignm E-value:
               7.00005e-41
               

               Alignm gaps (pig, cow):
               154, 0
               

               Conread position:
               1-216
               

               Cow position:
               
               

               Alignm length:
               217
               

               Alignm identity:
               174
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               38, 32
               

               Conread position:
               1-216
               

               Cow position:
               
               

               Alignm length:
               217
               

               Alignm identity:
               181
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 32
               

               Conread position:
               1-225
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               184
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 0
               

               Conread position:
               1-225
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               173
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               38, 32
               

               Conread position:
               1-232
               

               Cow position:
               
               

               Alignm length:
               233
               

               Alignm identity:
               183
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               38, 32
               

               Conread position:
               2-105
               

               Cow position:
               
               

               Alignm length:
               105
               

               Alignm identity:
               86
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               37, 31
               

               Conread position:
               2-154
               

               Cow position:
               
               

               Alignm length:
               155
               

               Alignm identity:
               125
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               45, 31
               

               Conread position:
               2-193
               

               Cow position:
               
               

               Alignm length:
               201
               

               Alignm identity:
               153
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               160, 0
               

               Conread position:
               2-193
               

               Cow position:
               
               

               Alignm length:
               201
               

               Alignm identity:
               153
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               160, 0
               

               Conread position:
               2-215
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               165
               

               Alignm E-value:
               8.96831e-44
               

               Alignm gaps (pig, cow):
               190, 165
               

               Conread position:
               2-215
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               172
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 31
               

               Conread position:
               2-217
               

               Cow position:
               
               

               Alignm length:
               219
               

               Alignm identity:
               170
               

               Alignm E-value:
               7.00005e-41
               

               Alignm gaps (pig, cow):
               14, 31
               

               Conread position:
               2-218
               

               Cow position:
               
               

               Alignm length:
               218
               

               Alignm identity:
               169
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 31
               

               Conread position:
               2-219
               

               Cow position:
               
               

               Alignm length:
               220
               

               Alignm identity:
               170
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               37, 31
               

               Conread position:
               2-222
               

               Cow position:
               
               

               Alignm length:
               221
               

               Alignm identity:
               166
               

               Alignm E-value:
               8.00001e-42
               

               Alignm gaps (pig, cow):
               211, 0
               

               Conread position:
               2-224
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               170
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               37, 31
               

               Conread position:
               2-232
               

               Cow position:
               
               

               Alignm length:
               232
               

               Alignm identity:
               181
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 46
               

               Conread position:
               3-97
               

               Cow position:
               
               

               Alignm length:
               96
               

               Alignm identity:
               82
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               36, 30
               

               Conread position:
               3-165
               

               Cow position:
               
               

               Alignm length:
               164
               

               Alignm identity:
               134
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               35, 30
               

               Conread position:
               3-168
               

               Cow position:
               
               

               Alignm length:
               167
               

               Alignm identity:
               129
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               36, 30
               

               Conread position:
               3-170
               

               Cow position:
               
               

               Alignm length:
               170
               

               Alignm identity:
               135
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               36, 30
               

               Conread position:
               3-191
               

               Cow position:
               
               

               Alignm length:
               190
               

               Alignm identity:
               149
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               36, 30
               

               Conread position:
               3-213
               

               Cow position:
               
               

               Alignm length:
               217
               

               Alignm identity:
               172
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               36, 30
               

               Conread position:
               3-214
               

               Cow position:
               
               

               Alignm length:
               223
               

               Alignm identity:
               169
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               36, 30
               

               Conread position:
               3-214
               

               Cow position:
               
               

               Alignm length:
               212
               

               Alignm identity:
               161
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               170, 0
               

               Conread position:
               3-215
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               161
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               36, 30
               

               Conread position:
               3-215
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               165
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               56, 30
               

               Conread position:
               3-215
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               170
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 30
               

               Conread position:
               3-215
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               176
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 30
               

               Conread position:
               3-215
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               170
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 30
               

               Conread position:
               3-216
               

               Cow position:
               
               

               Alignm length:
               222
               

               Alignm identity:
               177
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 30
               

               Conread position:
               3-216
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               176
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 30
               

               Conread position:
               3-219
               

               Cow position:
               
               

               Alignm length:
               218
               

               Alignm identity:
               175
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 30
               

               Conread position:
               3-224
               

               Cow position:
               
               

               Alignm length:
               231
               

               Alignm identity:
               181
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               36, 30
               

               Conread position:
               3-242
               

               Cow position:
               
               

               Alignm length:
               241
               

               Alignm identity:
               191
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 29
               

               Conread position:
               3-244
               

               Cow position:
               
               

               Alignm length:
               243
               

               Alignm identity:
               188
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               29, 36
               

               Conread position:
               4-132
               

               Cow position:
               
               

               Alignm length:
               130
               

               Alignm identity:
               107
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               35, 29
               

               Conread position:
               4-212
               

               Cow position:
               
               

               Alignm length:
               210
               

               Alignm identity:
               163
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               35, 29
               

               Conread position:
               4-214
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               170
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               35, 29
               

               Conread position:
               5-214
               

               Cow position:
               
               

               Alignm length:
               219
               

               Alignm identity:
               163
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               34, 28
               

               Conread position:
               5-215
               

               Cow position:
               
               

               Alignm length:
               212
               

               Alignm identity:
               158
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               34, 27
               

               Conread position:
               5-217
               

               Cow position:
               
               

               Alignm length:
               231
               

               Alignm identity:
               174
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               34, 28
               

               Conread position:
               5-223
               

               Cow position:
               
               

               Alignm length:
               220
               

               Alignm identity:
               174
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 28
               

               Conread position:
               6-181
               

               Cow position:
               
               

               Alignm length:
               177
               

               Alignm identity:
               143
               

               Alignm E-value:
               7.00005e-41
               

               Alignm gaps (pig, cow):
               33, 27
               

               Conread position:
               6-198
               

               Cow position:
               
               

               Alignm length:
               196
               

               Alignm identity:
               153
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               33, 27
               

               Conread position:
               6-205
               

               Cow position:
               
               

               Alignm length:
               205
               

               Alignm identity:
               160
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               156, 47
               

               Conread position:
               6-207
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               170
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               33, 25
               

               Conread position:
               6-214
               

               Cow position:
               
               

               Alignm length:
               211
               

               Alignm identity:
               167
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 27
               

               Conread position:
               6-215
               

               Cow position:
               
               

               Alignm length:
               211
               

               Alignm identity:
               152
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               33, 27
               

               Conread position:
               6-215
               

               Cow position:
               
               

               Alignm length:
               211
               

               Alignm identity:
               166
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               33, 27
               

               Conread position:
               6-216
               

               Cow position:
               
               

               Alignm length:
               212
               

               Alignm identity:
               170
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 27
               

               Conread position:
               6-216
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               163
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               33, 27
               

               Conread position:
               6-216
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               163
               

               Alignm E-value:
               6e-39
               

               Alignm gaps (pig, cow):
               33, 27
               

               Conread position:
               6-217
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               181
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 26
               

               Conread position:
               6-218
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               168
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               33, 27
               

               Conread position:
               6-219
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               169
               

               Alignm E-value:
               2.8026e-45
               

               Alignm gaps (pig, cow):
               17, 9
               

               Conread position:
               6-220
               

               Cow position:
               
               

               Alignm length:
               218
               

               Alignm identity:
               171
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               31, 27
               

               Conread position:
               6-222
               

               Cow position:
               
               

               Alignm length:
               219
               

               Alignm identity:
               171
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               33, 27
               

               Conread position:
               7-180
               

               Cow position:
               
               

               Alignm length:
               175
               

               Alignm identity:
               141
               

               Alignm E-value:
               6e-39
               

               Alignm gaps (pig, cow):
               29, 39
               

               Conread position:
               7-203
               

               Cow position:
               
               

               Alignm length:
               197
               

               Alignm identity:
               156
               

               Alignm E-value:
               8.96831e-44
               

               Alignm gaps (pig, cow):
               165, 0
               

               Conread position:
               7-206
               

               Cow position:
               
               

               Alignm length:
               201
               

               Alignm identity:
               167
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 26
               

               Conread position:
               7-211
               

               Cow position:
               
               

               Alignm length:
               207
               

               Alignm identity:
               151
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               32, 25
               

               Conread position:
               7-217
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               165
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               32, 26
               

               Conread position:
               7-225
               

               Cow position:
               
               

               Alignm length:
               220
               

               Alignm identity:
               174
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 26
               

               Conread position:
               8-114
               

               Cow position:
               
               

               Alignm length:
               108
               

               Alignm identity:
               90
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               34, 24
               

               Conread position:
               8-160
               

               Cow position:
               
               

               Alignm length:
               154
               

               Alignm identity:
               130
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               31, 24
               

               Conread position:
               8-216
               

               Cow position:
               
               

               Alignm length:
               210
               

               Alignm identity:
               160
               

               Alignm E-value:
               6e-40
               

               Alignm gaps (pig, cow):
               189, 50
               

               Conread position:
               9-147
               

               Cow position:
               
               

               Alignm length:
               140
               

               Alignm identity:
               113
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               30, 24
               

               Conread position:
               9-214
               

               Cow position:
               
               

               Alignm length:
               206
               

               Alignm identity:
               167
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               9-217
               

               Cow position:
               
               

               Alignm length:
               209
               

               Alignm identity:
               167
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               50, 0
               

               Conread position:
               9-220
               

               Cow position:
               
               

               Alignm length:
               212
               

               Alignm identity:
               168
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               168, 0
               

               Conread position:
               10-175
               

               Cow position:
               
               

               Alignm length:
               167
               

               Alignm identity:
               135
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               49, 24
               

               Conread position:
               10-212
               

               Cow position:
               
               

               Alignm length:
               204
               

               Alignm identity:
               169
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               29, 23
               

               Conread position:
               10-213
               

               Cow position:
               
               

               Alignm length:
               206
               

               Alignm identity:
               164
               

               Alignm E-value:
               2.8026e-45
               

               Alignm gaps (pig, cow):
               29, 22
               

               Conread position:
               10-215
               

               Cow position:
               
               

               Alignm length:
               208
               

               Alignm identity:
               159
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               29, 23
               

               Conread position:
               10-215
               

               Cow position:
               
               

               Alignm length:
               207
               

               Alignm identity:
               164
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               29, 23
               

               Conread position:
               10-215
               

               Cow position:
               
               

               Alignm length:
               208
               

               Alignm identity:
               172
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               29, 23
               

               Conread position:
               10-235
               

               Cow position:
               
               

               Alignm length:
               235
               

               Alignm identity:
               165
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               156, 23
               

               Conread position:
               11-217
               

               Cow position:
               
               

               Alignm length:
               210
               

               Alignm identity:
               161
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               28, 22
               

               Conread position:
               20-220
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               169
               

               Alignm E-value:
               6e-40
               

               Alignm gaps (pig, cow):
               54, 0
               

               Conread position:
               55-234
               

               Cow position:
               
               

               Alignm length:
               180
               

               Alignm identity:
               144
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               110, 0
               

               Conread position:
               80-222
               

               Cow position:
               
               

               Alignm length:
               144
               

               Alignm identity:
               110
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               117, 40
               

               Conread position:
               80-224
               

               Cow position:
               
               

               Alignm length:
               147
               

               Alignm identity:
               113
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               58, 99
               
Show alignments to all cow chromosomes.