Cow genome map


           Conread name:
           unkn-SGD602702291.R1
        

               Conread position:
               1-131
               

               Cow position:
               
               

               Alignm length:
               132
               

               Alignm identity:
               114
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               38, 32
               

               Conread position:
               1-137
               

               Cow position:
               
               

               Alignm length:
               137
               

               Alignm identity:
               122
               

               Alignm E-value:
               5.99994e-41
               

               Alignm gaps (pig, cow):
               32, 0
               

               Conread position:
               1-213
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               173
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 32
               

               Conread position:
               1-214
               

               Cow position:
               
               

               Alignm length:
               223
               

               Alignm identity:
               173
               

               Alignm E-value:
               8.40779e-45
               

               Alignm gaps (pig, cow):
               174, 0
               

               Conread position:
               1-215
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               179
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               38, 32
               

               Conread position:
               1-215
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               175
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               38, 31
               

               Conread position:
               1-215
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               156
               

               Alignm E-value:
               9e-34
               

               Alignm gaps (pig, cow):
               38, 32
               

               Conread position:
               1-232
               

               Cow position:
               
               

               Alignm length:
               233
               

               Alignm identity:
               174
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               36, 32
               

               Conread position:
               2-115
               

               Cow position:
               
               

               Alignm length:
               115
               

               Alignm identity:
               94
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               37, 31
               

               Conread position:
               2-117
               

               Cow position:
               
               

               Alignm length:
               117
               

               Alignm identity:
               98
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               37, 31
               

               Conread position:
               2-215
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               161
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               158, 59
               

               Conread position:
               2-215
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               178
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 31
               

               Conread position:
               2-219
               

               Cow position:
               
               

               Alignm length:
               228
               

               Alignm identity:
               183
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 31
               

               Conread position:
               2-234
               

               Cow position:
               
               

               Alignm length:
               234
               

               Alignm identity:
               183
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               212, 0
               

               Conread position:
               3-105
               

               Cow position:
               
               

               Alignm length:
               105
               

               Alignm identity:
               87
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               13, 31
               

               Conread position:
               3-120
               

               Cow position:
               
               

               Alignm length:
               119
               

               Alignm identity:
               96
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               35, 30
               

               Conread position:
               3-131
               

               Cow position:
               
               

               Alignm length:
               130
               

               Alignm identity:
               111
               

               Alignm E-value:
               8e-33
               

               Alignm gaps (pig, cow):
               36, 30
               

               Conread position:
               3-131
               

               Cow position:
               
               

               Alignm length:
               130
               

               Alignm identity:
               105
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               36, 28
               

               Conread position:
               3-139
               

               Cow position:
               
               

               Alignm length:
               138
               

               Alignm identity:
               116
               

               Alignm E-value:
               7e-32
               

               Alignm gaps (pig, cow):
               36, 30
               

               Conread position:
               3-174
               

               Cow position:
               
               

               Alignm length:
               173
               

               Alignm identity:
               145
               

               Alignm E-value:
               8.40779e-45
               

               Alignm gaps (pig, cow):
               36, 30
               

               Conread position:
               3-200
               

               Cow position:
               
               

               Alignm length:
               199
               

               Alignm identity:
               162
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 30
               

               Conread position:
               3-205
               

               Cow position:
               
               

               Alignm length:
               204
               

               Alignm identity:
               158
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               36, 30
               

               Conread position:
               3-205
               

               Cow position:
               
               

               Alignm length:
               204
               

               Alignm identity:
               159
               

               Alignm E-value:
               6e-40
               

               Alignm gaps (pig, cow):
               36, 30
               

               Conread position:
               3-205
               

               Cow position:
               
               

               Alignm length:
               204
               

               Alignm identity:
               147
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               36, 29
               

               Conread position:
               3-210
               

               Cow position:
               
               

               Alignm length:
               209
               

               Alignm identity:
               162
               

               Alignm E-value:
               7.9874e-44
               

               Alignm gaps (pig, cow):
               36, 28
               

               Conread position:
               3-211
               

               Cow position:
               
               

               Alignm length:
               210
               

               Alignm identity:
               169
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 30
               

               Conread position:
               3-212
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               163
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               52, 177
               

               Conread position:
               3-213
               

               Cow position:
               
               

               Alignm length:
               212
               

               Alignm identity:
               159
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               137, 149
               

               Conread position:
               3-215
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               171
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 30
               

               Conread position:
               3-215
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               163
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               35, 30
               

               Conread position:
               3-215
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               173
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 30
               

               Conread position:
               3-215
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               166
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               36, 30
               

               Conread position:
               3-215
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               173
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 32
               

               Conread position:
               3-215
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               172
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               174, 0
               

               Conread position:
               3-215
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               164
               

               Alignm E-value:
               6e-40
               

               Alignm gaps (pig, cow):
               36, 30
               

               Conread position:
               3-216
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               168
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               36, 30
               

               Conread position:
               3-217
               

               Cow position:
               
               

               Alignm length:
               223
               

               Alignm identity:
               174
               

               Alignm E-value:
               7.9874e-44
               

               Alignm gaps (pig, cow):
               35, 30
               

               Conread position:
               3-217
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               161
               

               Alignm E-value:
               6.99949e-42
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               3-217
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               173
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 30
               

               Conread position:
               3-220
               

               Cow position:
               
               

               Alignm length:
               219
               

               Alignm identity:
               168
               

               Alignm E-value:
               7.9874e-44
               

               Alignm gaps (pig, cow):
               36, 32
               

               Conread position:
               3-222
               

               Cow position:
               
               

               Alignm length:
               222
               

               Alignm identity:
               168
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               36, 30
               

               Conread position:
               3-236
               

               Cow position:
               
               

               Alignm length:
               236
               

               Alignm identity:
               182
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 30
               

               Conread position:
               3-242
               

               Cow position:
               
               

               Alignm length:
               241
               

               Alignm identity:
               188
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 30
               

               Conread position:
               4-215
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               174
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               35, 29
               

               Conread position:
               4-222
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               167
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               35, 29
               

               Conread position:
               5-131
               

               Cow position:
               
               

               Alignm length:
               128
               

               Alignm identity:
               100
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               34, 28
               

               Conread position:
               5-215
               

               Cow position:
               
               

               Alignm length:
               225
               

               Alignm identity:
               173
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               34, 11
               

               Conread position:
               5-216
               

               Cow position:
               
               

               Alignm length:
               212
               

               Alignm identity:
               165
               

               Alignm E-value:
               2.8026e-45
               

               Alignm gaps (pig, cow):
               142, 0
               

               Conread position:
               5-216
               

               Cow position:
               
               

               Alignm length:
               225
               

               Alignm identity:
               169
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               34, 28
               

               Conread position:
               5-217
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               171
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               5-234
               

               Cow position:
               
               

               Alignm length:
               233
               

               Alignm identity:
               171
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               34, 28
               

               Conread position:
               6-120
               

               Cow position:
               
               

               Alignm length:
               116
               

               Alignm identity:
               96
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               52, 26
               

               Conread position:
               6-197
               

               Cow position:
               
               

               Alignm length:
               199
               

               Alignm identity:
               150
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               155, 0
               

               Conread position:
               6-203
               

               Cow position:
               
               

               Alignm length:
               199
               

               Alignm identity:
               153
               

               Alignm E-value:
               9e-34
               

               Alignm gaps (pig, cow):
               33, 27
               

               Conread position:
               6-213
               

               Cow position:
               
               

               Alignm length:
               209
               

               Alignm identity:
               171
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 27
               

               Conread position:
               6-215
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               169
               

               Alignm E-value:
               6e-40
               

               Alignm gaps (pig, cow):
               33, 27
               

               Conread position:
               6-215
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               163
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               33, 27
               

               Conread position:
               6-215
               

               Cow position:
               
               

               Alignm length:
               211
               

               Alignm identity:
               166
               

               Alignm E-value:
               7.9874e-44
               

               Alignm gaps (pig, cow):
               33, 27
               

               Conread position:
               6-215
               

               Cow position:
               
               

               Alignm length:
               211
               

               Alignm identity:
               170
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 27
               

               Conread position:
               6-215
               

               Cow position:
               
               

               Alignm length:
               211
               

               Alignm identity:
               171
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 28
               

               Conread position:
               6-216
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               170
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 27
               

               Conread position:
               6-216
               

               Cow position:
               
               

               Alignm length:
               212
               

               Alignm identity:
               176
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 27
               

               Conread position:
               6-218
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               161
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               33, 27
               

               Conread position:
               6-221
               

               Cow position:
               
               

               Alignm length:
               219
               

               Alignm identity:
               163
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               33, 27
               

               Conread position:
               6-223
               

               Cow position:
               
               

               Alignm length:
               220
               

               Alignm identity:
               174
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 29
               

               Conread position:
               6-244
               

               Cow position:
               
               

               Alignm length:
               252
               

               Alignm identity:
               196
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 28
               

               Conread position:
               7-133
               

               Cow position:
               
               

               Alignm length:
               132
               

               Alignm identity:
               106
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               32, 26
               

               Conread position:
               7-204
               

               Cow position:
               
               

               Alignm length:
               199
               

               Alignm identity:
               162
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 26
               

               Conread position:
               7-206
               

               Cow position:
               
               

               Alignm length:
               201
               

               Alignm identity:
               148
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               32, 26
               

               Conread position:
               7-211
               

               Cow position:
               
               

               Alignm length:
               206
               

               Alignm identity:
               153
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               51, 67
               

               Conread position:
               7-212
               

               Cow position:
               
               

               Alignm length:
               207
               

               Alignm identity:
               164
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               32, 26
               

               Conread position:
               7-213
               

               Cow position:
               
               

               Alignm length:
               208
               

               Alignm identity:
               164
               

               Alignm E-value:
               2.8026e-45
               

               Alignm gaps (pig, cow):
               32, 25
               

               Conread position:
               7-215
               

               Cow position:
               
               

               Alignm length:
               211
               

               Alignm identity:
               164
               

               Alignm E-value:
               6.99949e-42
               

               Alignm gaps (pig, cow):
               32, 26
               

               Conread position:
               7-215
               

               Cow position:
               
               

               Alignm length:
               210
               

               Alignm identity:
               169
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 26
               

               Conread position:
               7-218
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               171
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               7-219
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               160
               

               Alignm E-value:
               8e-33
               

               Alignm gaps (pig, cow):
               32, 26
               

               Conread position:
               7-233
               

               Cow position:
               
               

               Alignm length:
               227
               

               Alignm identity:
               176
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               170, 0
               

               Conread position:
               8-137
               

               Cow position:
               
               

               Alignm length:
               131
               

               Alignm identity:
               108
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               31, 25
               

               Conread position:
               8-197
               

               Cow position:
               
               

               Alignm length:
               191
               

               Alignm identity:
               151
               

               Alignm E-value:
               5.99994e-41
               

               Alignm gaps (pig, cow):
               31, 25
               

               Conread position:
               8-215
               

               Cow position:
               
               

               Alignm length:
               209
               

               Alignm identity:
               167
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               31, 25
               

               Conread position:
               8-215
               

               Cow position:
               
               

               Alignm length:
               209
               

               Alignm identity:
               160
               

               Alignm E-value:
               6.99949e-42
               

               Alignm gaps (pig, cow):
               31, 25
               

               Conread position:
               8-218
               

               Cow position:
               
               

               Alignm length:
               212
               

               Alignm identity:
               161
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               31, 25
               

               Conread position:
               8-218
               

               Cow position:
               
               

               Alignm length:
               212
               

               Alignm identity:
               173
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               31, 25
               

               Conread position:
               8-221
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               164
               

               Alignm E-value:
               6.99949e-42
               

               Alignm gaps (pig, cow):
               186, 177
               

               Conread position:
               9-149
               

               Cow position:
               
               

               Alignm length:
               142
               

               Alignm identity:
               112
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               29, 24
               

               Conread position:
               9-252
               

               Cow position:
               
               

               Alignm length:
               246
               

               Alignm identity:
               190
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               38, 24
               

               Conread position:
               10-134
               

               Cow position:
               
               

               Alignm length:
               126
               

               Alignm identity:
               104
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               12, 24
               

               Conread position:
               10-198
               

               Cow position:
               
               

               Alignm length:
               199
               

               Alignm identity:
               159
               

               Alignm E-value:
               6e-40
               

               Alignm gaps (pig, cow):
               37, 23
               

               Conread position:
               10-210
               

               Cow position:
               
               

               Alignm length:
               211
               

               Alignm identity:
               167
               

               Alignm E-value:
               6.99949e-42
               

               Alignm gaps (pig, cow):
               29, 22
               

               Conread position:
               10-215
               

               Cow position:
               
               

               Alignm length:
               207
               

               Alignm identity:
               168
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               29, 23
               

               Conread position:
               10-215
               

               Cow position:
               
               

               Alignm length:
               208
               

               Alignm identity:
               159
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               29, 23
               

               Conread position:
               10-215
               

               Cow position:
               
               

               Alignm length:
               207
               

               Alignm identity:
               164
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               29, 23
               

               Conread position:
               10-215
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               166
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               154, 184
               

               Conread position:
               10-231
               

               Cow position:
               
               

               Alignm length:
               231
               

               Alignm identity:
               176
               

               Alignm E-value:
               5e-39
               

               Alignm gaps (pig, cow):
               152, 25
               

               Conread position:
               16-215
               

               Cow position:
               
               

               Alignm length:
               210
               

               Alignm identity:
               163
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               23, 17
               

               Conread position:
               20-142
               

               Cow position:
               
               

               Alignm length:
               124
               

               Alignm identity:
               101
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               19, 13
               

               Conread position:
               20-170
               

               Cow position:
               
               

               Alignm length:
               152
               

               Alignm identity:
               116
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               19, 13
               

               Conread position:
               20-216
               

               Cow position:
               
               

               Alignm length:
               200
               

               Alignm identity:
               155
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               67, 153
               

               Conread position:
               20-276
               

               Cow position:
               
               

               Alignm length:
               261
               

               Alignm identity:
               198
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               177, 14
               

               Conread position:
               23-125
               

               Cow position:
               
               

               Alignm length:
               103
               

               Alignm identity:
               86
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               64, 0
               
Show alignments to all cow chromosomes.