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Cow genome map

           
Conread name:
           
unkn-SofBand_140
        

               
Conread position:
               
110-559
               

               
Cow position:
               
chr1:5597464-5597015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 86
               

               
Conread position:
               
130-476
               

               
Cow position:
               
chr1:3167319-3166966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 54
               

               
Conread position:
               
153-585
               

               
Cow position:
               
chr1:64804328-64803872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
122, 26
               

               
Conread position:
               
155-501
               

               
Cow position:
               
chr1:47233705-47233345 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
28, 54
               

               
Conread position:
               
156-499
               

               
Cow position:
               
chr1:100800138-100800482 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
156, 23
               

               
Conread position:
               
168-317
               

               
Cow position:
               
chr1:95056850-95056994 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
143, 11
               

               
Conread position:
               
168-373
               

               
Cow position:
               
chr1:41004573-41004353 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
41, 11
               

               
Conread position:
               
168-390
               

               
Cow position:
               
chr1:99614242-99614473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
133, 7
               

               
Conread position:
               
168-433
               

               
Cow position:
               
chr1:1991630-1991351 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
130, 11
               

               
Conread position:
               
168-435
               

               
Cow position:
               
chr1:51981022-51981292 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
105, 11
               

               
Conread position:
               
168-436
               

               
Cow position:
               
chr1:82884595-82884322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
127, 11
               

               
Conread position:
               
168-438
               

               
Cow position:
               
chr1:52753371-52753088 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
106, 11
               

               
Conread position:
               
168-471
               

               
Cow position:
               
chr1:100393370-100393058 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
130, 7
               

               
Conread position:
               
168-497
               

               
Cow position:
               
chr1:37707174-37706846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
93, 11
               

               
Conread position:
               
168-497
               

               
Cow position:
               
chr1:74822246-74822580 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
130, 11
               

               
Conread position:
               
168-516
               

               
Cow position:
               
chr1:52039431-52039786 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
128, 7
               

               
Conread position:
               
168-557
               

               
Cow position:
               
chr1:33719908-33720299 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
101, 11
               

               
Conread position:
               
168-559
               

               
Cow position:
               
chr1:3923999-3923607 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
145, 14
               

               
Conread position:
               
168-559
               

               
Cow position:
               
chr1:54478119-54478513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
139, 11
               

               
Conread position:
               
168-570
               

               
Cow position:
               
chr1:75382786-75383169 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
145, 11
               

               
Conread position:
               
168-575
               

               
Cow position:
               
chr1:24133261-24132849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
131, 12
               

               
Conread position:
               
168-577
               

               
Cow position:
               
chr1:101713912-101714330 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
132, 7
               

               
Conread position:
               
168-584
               

               
Cow position:
               
chr1:29935587-29935170 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
141, 11
               

               
Conread position:
               
168-591
               

               
Cow position:
               
chr1:19482278-19481871 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
128, 11
               

               
Conread position:
               
168-595
               

               
Cow position:
               
chr1:97611858-97611446 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
111, 11
               

               
Conread position:
               
170-427
               

               
Cow position:
               
chr1:26729524-26729779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
136, 9
               

               
Conread position:
               
171-442
               

               
Cow position:
               
chr1:6788493-6788207 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
126, 28
               

               
Conread position:
               
171-502
               

               
Cow position:
               
chr1:91875116-91874783 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
32, 64
               

               
Conread position:
               
171-586
               

               
Cow position:
               
chr1:28563773-28563339 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
12, 27
               

               
Conread position:
               
174-502
               

               
Cow position:
               
chr1:80336447-80336112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
102, 23
               

               
Conread position:
               
174-577
               

               
Cow position:
               
chr1:1956529-1956124 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
6, 24
               

               
Conread position:
               
174-587
               

               
Cow position:
               
chr1:197208-196780 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
121, 23
               

               
Conread position:
               
175-555
               

               
Cow position:
               
chr1:11728978-11729365 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
137, 22
               

               
Conread position:
               
176-537
               

               
Cow position:
               
chr1:92370560-92370193 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
98, 21
               

               
Conread position:
               
180-439
               

               
Cow position:
               
chr1:11226440-11226173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
99, 19
               

               
Conread position:
               
180-586
               

               
Cow position:
               
chr1:82880470-82880853 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
180, 17
               

               
Conread position:
               
181-385
               

               
Cow position:
               
chr1:35769249-35769456 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
27, 16
               

               
Conread position:
               
181-559
               

               
Cow position:
               
chr1:93499429-93499816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
106, 19
               

               
Conread position:
               
181-577
               

               
Cow position:
               
chr1:55229791-55230189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
93, 16
               

               
Conread position:
               
181-577
               

               
Cow position:
               
chr1:76037699-76037300 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
89, 16
               

               
Conread position:
               
181-578
               

               
Cow position:
               
chr1:10942285-10941884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
88, 19
               

               
Conread position:
               
181-578
               

               
Cow position:
               
chr1:10964101-10964502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
88, 19
               

               
Conread position:
               
181-586
               

               
Cow position:
               
chr1:46693850-46693429 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
87, 16
               

               
Conread position:
               
181-586
               

               
Cow position:
               
chr1:70538410-70538829 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
115, 18
               

               
Conread position:
               
186-383
               

               
Cow position:
               
chr1:24413251-24413468 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
109, 11
               

               
Conread position:
               
186-484
               

               
Cow position:
               
chr1:80899919-80900237 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
77, 11
               

               
Conread position:
               
186-586
               

               
Cow position:
               
chr1:85867405-85867821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
32, 11
               

               
Conread position:
               
186-587
               

               
Cow position:
               
chr1:81290320-81290730 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 235
               

               
Conread position:
               
194-577
               

               
Cow position:
               
chr1:20667923-20667535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
119, 30
               

               
Conread position:
               
196-438
               

               
Cow position:
               
chr1:73682416-73682170 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
78, 144
               

               
Conread position:
               
196-502
               

               
Cow position:
               
chr1:33207054-33206745 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
114, 154
               

               
Conread position:
               
196-559
               

               
Cow position:
               
chr1:61012130-61012503 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
68, 79
               

               
Conread position:
               
196-588
               

               
Cow position:
               
chr1:41696875-41697279 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
101, 162
               

               
Conread position:
               
196-595
               

               
Cow position:
               
chr1:79590921-79591334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
78, 160
               

               
Conread position:
               
197-501
               

               
Cow position:
               
chr1:57900917-57900591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
101, 27
               

               
Conread position:
               
198-559
               

               
Cow position:
               
chr1:90621692-90621309 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 304
               

               
Conread position:
               
199-304
               

               
Cow position:
               
chr1:102113285-102113180 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
106
               

               
Alignm identity:
               
85
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
199-307
               

               
Cow position:
               
chr1:99792635-99792743 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
109
               

               
Alignm identity:
               
95
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
199-316
               

               
Cow position:
               
chr1:83593984-83593865 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
121
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
76, 15
               

               
Conread position:
               
199-317
               

               
Cow position:
               
chr1:55686397-55686278 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
120
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
114, 0
               

               
Conread position:
               
199-409
               

               
Cow position:
               
chr1:45535525-45535750 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
99, 0
               

               
Conread position:
               
199-422
               

               
Cow position:
               
chr1:99136607-99136374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
99, 31
               

               
Conread position:
               
199-441
               

               
Cow position:
               
chr1:42138690-42138933 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
76, 41
               

               
Conread position:
               
199-460
               

               
Cow position:
               
chr1:20204850-20205121 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
70, 33
               

               
Conread position:
               
199-476
               

               
Cow position:
               
chr1:88652454-88652746 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
108, 25
               

               
Conread position:
               
199-479
               

               
Cow position:
               
chr1:91039353-91039061 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
74, 214
               

               
Conread position:
               
199-480
               

               
Cow position:
               
chr1:85774283-85774571 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
109, 47
               

               
Conread position:
               
199-485
               

               
Cow position:
               
chr1:39510227-39509939 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
51, 19
               

               
Conread position:
               
199-496
               

               
Cow position:
               
chr1:83583114-83582805 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
98, 80
               

               
Conread position:
               
199-497
               

               
Cow position:
               
chr1:81613209-81613518 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 138
               

               
Conread position:
               
199-499
               

               
Cow position:
               
chr1:52994847-52995157 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
99, 78
               

               
Conread position:
               
199-500
               

               
Cow position:
               
chr1:6077718-6078025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
87, 190
               

               
Conread position:
               
199-500
               

               
Cow position:
               
chr1:62036624-62036937 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
60, 97
               

               
Conread position:
               
199-500
               

               
Cow position:
               
chr1:79844292-79844597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
105, 36
               

               
Conread position:
               
199-501
               

               
Cow position:
               
chr1:84255578-84255900 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
69, 306
               

               
Conread position:
               
199-501
               

               
Cow position:
               
chr1:85162724-85162412 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
107, 0
               

               
Conread position:
               
199-501
               

               
Cow position:
               
chr1:98551536-98551852 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 75
               

               
Conread position:
               
199-502
               

               
Cow position:
               
chr1:71253731-71253422 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
108, 31
               

               
Conread position:
               
199-503
               

               
Cow position:
               
chr1:93043849-93044150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 197
               

               
Conread position:
               
199-503
               

               
Cow position:
               
chr1:97778818-97779128 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
66, 259
               

               
Conread position:
               
199-552
               

               
Cow position:
               
chr1:89510109-89509738 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
52, 91
               

               
Conread position:
               
199-552
               

               
Cow position:
               
chr1:98030738-98031105 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
7.00649e-44
               

               
Alignm gaps (pig, cow):
               
97, 277
               

               
Conread position:
               
199-553
               

               
Cow position:
               
chr1:43389224-43388863 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 17
               

               
Conread position:
               
199-554
               

               
Cow position:
               
chr1:55705430-55705055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 228
               

               
Conread position:
               
199-554
               

               
Cow position:
               
chr1:71079133-71078770 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 30
               

               
Conread position:
               
199-556
               

               
Cow position:
               
chr1:70434823-70435180 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
96, 197
               

               
Conread position:
               
199-556
               

               
Cow position:
               
chr1:83072267-83072636 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 19
               

               
Conread position:
               
199-556
               

               
Cow position:
               
chr1:101634525-101634893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
97, 17
               

               
Conread position:
               
199-559
               

               
Cow position:
               
chr1:51394248-51394615 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
99, 25
               

               
Conread position:
               
199-559
               

               
Cow position:
               
chr1:71295491-71295107 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
52, 314
               

               
Conread position:
               
199-559
               

               
Cow position:
               
chr1:78810859-78811235 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
109, 178
               

               
Conread position:
               
199-559
               

               
Cow position:
               
chr1:89388155-89388540 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
199-561
               

               
Cow position:
               
chr1:22728871-22729253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
112, 368
               

               
Conread position:
               
199-561
               

               
Cow position:
               
chr1:84812113-84811742 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
96, 0
               

               
Conread position:
               
199-574
               

               
Cow position:
               
chr1:35162227-35162618 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
70, 166
               

               
Conread position:
               
199-574
               

               
Cow position:
               
chr1:75744684-75745071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
97, 27
               

               
Conread position:
               
199-575
               

               
Cow position:
               
chr1:81515063-81515453 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
77, 94
               

               
Conread position:
               
199-576
               

               
Cow position:
               
chr1:43505347-43505737 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
97, 12
               

               
Conread position:
               
199-577
               

               
Cow position:
               
chr1:12464840-12464448 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
97, 29
               

               
Conread position:
               
199-578
               

               
Cow position:
               
chr1:81228516-81228122 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
74, 26
               

               
Conread position:
               
199-579
               

               
Cow position:
               
chr1:68817975-68817584 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 27
               

               
Conread position:
               
199-580
               

               
Cow position:
               
chr1:8446-8837 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
80, 36
               

               
Conread position:
               
199-580
               

               
Cow position:
               
chr1:64678521-64678898 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
106, 154
               

               
Conread position:
               
199-581
               

               
Cow position:
               
chr1:102784784-102785165 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 42
               

               
Conread position:
               
199-584
               

               
Cow position:
               
chr1:44506791-44507192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
74, 27
               

               
Conread position:
               
199-584
               

               
Cow position:
               
chr1:78857499-78857102 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
114, 17
               

               
Conread position:
               
199-585
               

               
Cow position:
               
chr1:42398373-42397972 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
75, 25
               

               
Conread position:
               
199-585
               

               
Cow position:
               
chr1:72304547-72304180 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
114, 25
               

               
Conread position:
               
199-586
               

               
Cow position:
               
chr1:36998016-36998410 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
76, 16
               

               
Conread position:
               
199-587
               

               
Cow position:
               
chr1:73546083-73545680 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
67, 150
               

               
Conread position:
               
199-595
               

               
Cow position:
               
chr1:73960525-73960919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
109, 247
               

               
Conread position:
               
199-597
               

               
Cow position:
               
chr1:42887439-42887045 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
114, 38
               

               
Conread position:
               
200-481
               

               
Cow position:
               
chr1:37309686-37309404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
79, 24
               

               
Conread position:
               
200-501
               

               
Cow position:
               
chr1:37886962-37886679 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
141, 54
               

               
Conread position:
               
200-502
               

               
Cow position:
               
chr1:7186612-7186926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
200-555
               

               
Cow position:
               
chr1:77720407-77720067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
111, 24
               

               
Conread position:
               
200-571
               

               
Cow position:
               
chr1:81569210-81568821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
111, 270
               

               
Conread position:
               
200-576
               

               
Cow position:
               
chr1:84910806-84910444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
86, 38
               

               
Conread position:
               
201-442
               

               
Cow position:
               
chr1:31414133-31413896 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
110, 23
               

               
Conread position:
               
201-558
               

               
Cow position:
               
chr1:16855870-16855505 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
18, 164
               

               
Conread position:
               
201-585
               

               
Cow position:
               
chr1:71119334-71119744 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
67, 264
               

               
Conread position:
               
201-586
               

               
Cow position:
               
chr1:11772255-11771860 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
73, 159
               

               
Conread position:
               
202-501
               

               
Cow position:
               
chr1:53671923-53671617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
27, 77
               

               
Conread position:
               
202-502
               

               
Cow position:
               
chr1:95176762-95177071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
103, 222
               

               
Conread position:
               
202-557
               

               
Cow position:
               
chr1:8287792-8287435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
16, 101
               

               
Conread position:
               
202-583
               

               
Cow position:
               
chr1:61742145-61741742 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 229
               

               
Conread position:
               
204-578
               

               
Cow position:
               
chr1:32341378-32340997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
82, 5
               

               
Conread position:
               
205-477
               

               
Cow position:
               
chr1:12978506-12978793 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
92, 145
               

               
Conread position:
               
205-538
               

               
Cow position:
               
chr1:53397817-53398149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
153, 99
               

               
Conread position:
               
205-583
               

               
Cow position:
               
chr1:61884745-61885132 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
101, 134
               

               
Conread position:
               
206-460
               

               
Cow position:
               
chr1:87211772-87212027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
102, 71
               

               
Conread position:
               
206-474
               

               
Cow position:
               
chr1:27380301-27380564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
7.00649e-44
               

               
Alignm gaps (pig, cow):
               
152, 124
               

               
Conread position:
               
206-554
               

               
Cow position:
               
chr1:101280885-101280545 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
107, 20
               

               
Conread position:
               
206-559
               

               
Cow position:
               
chr1:37322176-37321813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 223
               

               
Conread position:
               
206-582
               

               
Cow position:
               
chr1:89381101-89381498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
98, 0
               

               
Conread position:
               
207-557
               

               
Cow position:
               
chr1:26178983-26178613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
68, 147
               

               
Conread position:
               
209-559
               

               
Cow position:
               
chr1:25383492-25383866 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
94, 186
               

               
Conread position:
               
211-555
               

               
Cow position:
               
chr1:62964110-62964461 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
102, 79
               

               
Conread position:
               
211-590
               

               
Cow position:
               
chr1:88913149-88913551 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 228
               

               
Conread position:
               
212-501
               

               
Cow position:
               
chr1:52913040-52912765 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
124, 16
               

               
Conread position:
               
213-481
               

               
Cow position:
               
chr1:70380312-70380028 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
83, 181
               

               
Conread position:
               
213-585
               

               
Cow position:
               
chr1:86110898-86110520 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 210
               

               
Conread position:
               
214-559
               

               
Cow position:
               
chr1:68855004-68855363 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
8, 65
               

               
Conread position:
               
216-317
               

               
Cow position:
               
chr1:31960061-31960164 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
104
               

               
Alignm identity:
               
88
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
216-432
               

               
Cow position:
               
chr1:89508393-89508617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
216-501
               

               
Cow position:
               
chr1:93554680-93554969 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
63, 150
               

               
Conread position:
               
216-536
               

               
Cow position:
               
chr1:96277218-96276879 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
80, 212
               

               
Conread position:
               
216-559
               

               
Cow position:
               
chr1:41056520-41056876 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
92, 52
               

               
Conread position:
               
216-585
               

               
Cow position:
               
chr1:40599880-40600248 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
95, 260
               

               
Conread position:
               
216-586
               

               
Cow position:
               
chr1:96081320-96081702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
9, 144
               

               
Conread position:
               
216-594
               

               
Cow position:
               
chr1:54206982-54206590 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 208
               

               
Conread position:
               
217-499
               

               
Cow position:
               
chr1:85647944-85647649 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
82, 255
               

               
Conread position:
               
217-500
               

               
Cow position:
               
chr1:45553393-45553111 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
84, 197
               

               
Conread position:
               
217-501
               

               
Cow position:
               
chr1:3882627-3882326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
90, 285
               

               
Conread position:
               
218-496
               

               
Cow position:
               
chr1:38401631-38401929 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
9, 209
               

               
Conread position:
               
218-558
               

               
Cow position:
               
chr1:85028798-85029132 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
79, 28
               

               
Conread position:
               
219-554
               

               
Cow position:
               
chr1:80311310-80311649 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
88, 123
               

               
Conread position:
               
219-577
               

               
Cow position:
               
chr1:78096776-78097141 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
220-438
               

               
Cow position:
               
chr1:92437150-92436918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
55, 208
               

               
Conread position:
               
220-445
               

               
Cow position:
               
chr1:89497806-89498032 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
76, 151
               

               
Conread position:
               
220-559
               

               
Cow position:
               
chr1:1981273-1980913 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 340
               

               
Conread position:
               
220-559
               

               
Cow position:
               
chr1:57575918-57575567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 0
               

               
Conread position:
               
220-564
               

               
Cow position:
               
chr1:63530417-63530761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
59, 20
               

               
Conread position:
               
220-586
               

               
Cow position:
               
chr1:42175565-42175955 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 130
               

               
Conread position:
               
222-556
               

               
Cow position:
               
chr1:97090167-97090511 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
7.00649e-44
               

               
Alignm gaps (pig, cow):
               
14, 276
               

               
Conread position:
               
223-579
               

               
Cow position:
               
chr1:54258407-54258789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
47, 227
               

               
Conread position:
               
223-598
               

               
Cow position:
               
chr1:78091876-78092276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
50, 260
               

               
Conread position:
               
224-559
               

               
Cow position:
               
chr1:56477437-56477782 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
88, 28
               

               
Conread position:
               
224-586
               

               
Cow position:
               
chr1:83659429-83659052 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
47, 250
               

               
Conread position:
               
224-587
               

               
Cow position:
               
chr1:10778416-10778774 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
87, 22
               

               
Conread position:
               
226-416
               

               
Cow position:
               
chr1:44155098-44155300 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
71, 23
               

               
Conread position:
               
226-448
               

               
Cow position:
               
chr1:97761471-97761682 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
130, 27
               

               
Conread position:
               
226-485
               

               
Cow position:
               
chr1:89349814-89350084 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
70, 20
               

               
Conread position:
               
226-498
               

               
Cow position:
               
chr1:5135846-5135579 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
85, 13
               

               
Conread position:
               
226-515
               

               
Cow position:
               
chr1:89342148-89341829 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
226-527
               

               
Cow position:
               
chr1:22827014-22827311 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
85, 128
               

               
Conread position:
               
226-535
               

               
Cow position:
               
chr1:53458543-53458871 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
70, 199
               

               
Conread position:
               
226-559
               

               
Cow position:
               
chr1:14379686-14379353 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
85, 18
               

               
Conread position:
               
226-576
               

               
Cow position:
               
chr1:87197674-87198033 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 323
               

               
Conread position:
               
226-594
               

               
Cow position:
               
chr1:86682716-86682336 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 233
               

               
Conread position:
               
227-581
               

               
Cow position:
               
chr1:64572361-64572734 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
228-559
               

               
Cow position:
               
chr1:70828752-70829093 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
61, 29
               

               
Conread position:
               
228-585
               

               
Cow position:
               
chr1:91066304-91065935 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
85, 210
               

               
Conread position:
               
228-591
               

               
Cow position:
               
chr1:7971270-7971633 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
70, 65
               

               
Conread position:
               
229-559
               

               
Cow position:
               
chr1:56225315-56225663 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
13, 271
               

               
Conread position:
               
230-497
               

               
Cow position:
               
chr1:69264665-69264937 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
13, 124
               

               
Conread position:
               
230-556
               

               
Cow position:
               
chr1:100761930-100762268 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
50, 38
               

               
Conread position:
               
230-558
               

               
Cow position:
               
chr1:65318426-65318773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
38, 122
               

               
Conread position:
               
230-577
               

               
Cow position:
               
chr1:82936735-82936390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 101
               

               
Conread position:
               
230-582
               

               
Cow position:
               
chr1:10632898-10633257 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
11, 104
               

               
Conread position:
               
232-590
               

               
Cow position:
               
chr1:91023615-91023240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
75, 175
               

               
Conread position:
               
235-558
               

               
Cow position:
               
chr1:8129111-8128783 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
58, 228
               

               
Conread position:
               
235-576
               

               
Cow position:
               
chr1:101860634-101860276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
9, 191
               

               
Conread position:
               
238-442
               

               
Cow position:
               
chr1:87440327-87440543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
69, 210
               

               
Conread position:
               
241-430
               

               
Cow position:
               
chr1:85301280-85301481 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
56, 143
               

               
Conread position:
               
241-574
               

               
Cow position:
               
chr1:89448759-89449110 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
243-479
               

               
Cow position:
               
chr1:97954595-97954355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
63, 90
               

               
Conread position:
               
243-502
               

               
Cow position:
               
chr1:18780470-18780195 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
56, 37
               

               
Conread position:
               
245-447
               

               
Cow position:
               
chr1:5023890-5023681 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
246-585
               

               
Cow position:
               
chr1:78838665-78839011 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
51, 113
               

               
Conread position:
               
257-559
               

               
Cow position:
               
chr1:20104146-20104463 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 210
               

               
Conread position:
               
260-559
               

               
Cow position:
               
chr1:261598-261267 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
38, 164
               

               
Conread position:
               
268-559
               

               
Cow position:
               
chr1:41138243-41137951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
90, 69
               

               
Conread position:
               
268-581
               

               
Cow position:
               
chr1:10716391-10716725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
44, 111
               

               
Conread position:
               
268-583
               

               
Cow position:
               
chr1:53650903-53651198 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
39, 78
               

               
Conread position:
               
268-586
               

               
Cow position:
               
chr1:23999032-23998706 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
45, 78
               

               
Conread position:
               
273-586
               

               
Cow position:
               
chr1:85339298-85339602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
42, 80
               

               
Conread position:
               
278-500
               

               
Cow position:
               
chr1:68845258-68845040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
31, 61
               

               
Conread position:
               
299-442
               

               
Cow position:
               
chr1:61560793-61560647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
299-474
               

               
Cow position:
               
chr1:99793477-99793655 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
34, 117
               

               
Conread position:
               
299-484
               

               
Cow position:
               
chr1:52467235-52467421 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
44, 124
               

               
Conread position:
               
299-501
               

               
Cow position:
               
chr1:48769737-48769936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
299-501
               

               
Cow position:
               
chr1:77232640-77232445 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
299-501
               

               
Cow position:
               
chr1:80841586-80841779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
299-501
               

               
Cow position:
               
chr1:81580103-81580310 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
39, 124
               

               
Conread position:
               
299-502
               

               
Cow position:
               
chr1:50991868-50992068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
63, 21
               

               
Conread position:
               
299-503
               

               
Cow position:
               
chr1:51044372-51044172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
35, 145
               

               
Conread position:
               
299-537
               

               
Cow position:
               
chr1:37124059-37124302 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
41, 189
               

               
Conread position:
               
299-553
               

               
Cow position:
               
chr1:17196696-17196434 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
55, 149
               

               
Conread position:
               
299-555
               

               
Cow position:
               
chr1:34856697-34856432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
40, 169
               

               
Conread position:
               
299-555
               

               
Cow position:
               
chr1:45223513-45223769 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
61, 185
               

               
Conread position:
               
299-557
               

               
Cow position:
               
chr1:635751-635489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
60, 38
               

               
Conread position:
               
299-558
               

               
Cow position:
               
chr1:33409691-33409427 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
184, 50
               

               
Conread position:
               
299-559
               

               
Cow position:
               
chr1:64302314-64302053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
45, 188
               

               
Conread position:
               
299-559
               

               
Cow position:
               
chr1:79640357-79640092 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
299-559
               

               
Cow position:
               
chr1:82513422-82513155 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
55, 149
               

               
Conread position:
               
299-575
               

               
Cow position:
               
chr1:69551554-69551268 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
10, 42
               

               
Conread position:
               
299-579
               

               
Cow position:
               
chr1:52139699-52139410 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
62, 46
               

               
Conread position:
               
299-581
               

               
Cow position:
               
chr1:42541531-42541809 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
61, 48
               

               
Conread position:
               
299-582
               

               
Cow position:
               
chr1:46143529-46143248 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
63, 114
               

               
Conread position:
               
299-583
               

               
Cow position:
               
chr1:65028465-65028742 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
51, 179
               

               
Conread position:
               
299-585
               

               
Cow position:
               
chr1:47790732-47790447 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
39, 152
               

               
Conread position:
               
299-586
               

               
Cow position:
               
chr1:89158196-89157903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
44, 188
               

               
Conread position:
               
299-586
               

               
Cow position:
               
chr1:102306209-102305923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
39, 89
               

               
Conread position:
               
299-596
               

               
Cow position:
               
chr1:98583691-98583983 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
101, 38
               

               
Conread position:
               
300-500
               

               
Cow position:
               
chr1:67688645-67688451 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
9, 41
               

               
Conread position:
               
300-501
               

               
Cow position:
               
chr1:86912373-86912575 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
300-502
               

               
Cow position:
               
chr1:95072264-95072466 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
50, 185
               

               
Conread position:
               
300-555
               

               
Cow position:
               
chr1:58754861-58754605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
59, 115
               

               
Conread position:
               
300-556
               

               
Cow position:
               
chr1:54267999-54267746 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
59, 25
               

               
Conread position:
               
301-495
               

               
Cow position:
               
chr1:30136419-30136225 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
49, 95
               

               
Conread position:
               
301-525
               

               
Cow position:
               
chr1:3965775-3965999 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
153, 56
               

               
Conread position:
               
301-559
               

               
Cow position:
               
chr1:56618715-56618459 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
58, 39
               

               
Conread position:
               
302-559
               

               
Cow position:
               
chr1:78066602-78066346 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
37, 182
               

               
Conread position:
               
303-574
               

               
Cow position:
               
chr1:79003911-79004188 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
40, 117
               

               
Conread position:
               
304-586
               

               
Cow position:
               
chr1:35671481-35671758 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
189, 42
               

               
Conread position:
               
305-556
               

               
Cow position:
               
chr1:49825130-49824871 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
305-576
               

               
Cow position:
               
chr1:80584370-80584643 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
54, 32
               

               
Conread position:
               
305-577
               

               
Cow position:
               
chr1:101507297-101507564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
17, 153
               

               
Conread position:
               
305-587
               

               
Cow position:
               
chr1:50432548-50432256 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
54, 286
               

               
Conread position:
               
308-442
               

               
Cow position:
               
chr1:80904709-80904843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
34, 115
               

               
Conread position:
               
308-476
               

               
Cow position:
               
chr1:4581390-4581220 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
308-559
               

               
Cow position:
               
chr1:97303302-97303056 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
187, 37
               

               
Conread position:
               
309-501
               

               
Cow position:
               
chr1:84768936-84768746 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
55, 38
               

               
Conread position:
               
309-502
               

               
Cow position:
               
chr1:7023062-7023257 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
309-555
               

               
Cow position:
               
chr1:64113851-64113607 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
35, 30
               

               
Conread position:
               
309-559
               

               
Cow position:
               
chr1:79146878-79146617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
10, 119
               

               
Conread position:
               
309-577
               

               
Cow position:
               
chr1:48618296-48618032 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
213, 22
               

               
Conread position:
               
309-584
               

               
Cow position:
               
chr1:98059993-98060283 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
309-586
               

               
Cow position:
               
chr1:52662231-52661950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
45, 70
               

               
Conread position:
               
309-587
               

               
Cow position:
               
chr1:90904810-90904532 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
189, 28
               

               
Conread position:
               
311-559
               

               
Cow position:
               
chr1:70175596-70175344 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
28, 188
               

               
Conread position:
               
311-577
               

               
Cow position:
               
chr1:81481439-81481170 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
313-485
               

               
Cow position:
               
chr1:92590142-92590310 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
26, 76
               

               
Conread position:
               
319-559
               

               
Cow position:
               
chr1:97833663-97833894 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
20, 61
               

               
Conread position:
               
320-573
               

               
Cow position:
               
chr1:102529902-102529643 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
40, 19
               

               
Conread position:
               
323-559
               

               
Cow position:
               
chr1:89158740-89158511 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
31, 36
               

               
Conread position:
               
325-554
               

               
Cow position:
               
chr1:85771968-85772198 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
27, 16
               

               
Conread position:
               
327-502
               

               
Cow position:
               
chr1:8670733-8670908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
17, 21
               

               
Conread position:
               
331-581
               

               
Cow position:
               
chr1:67654356-67654106 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
12, 17
               

               
Conread position:
               
333-574
               

               
Cow position:
               
chr1:41027042-41027282 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
26, 7
               

               
Conread position:
               
337-471
               

               
Cow position:
               
chr1:82556439-82556307 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
22, 74
               

               
Conread position:
               
338-578
               

               
Cow position:
               
chr1:100852682-100852920 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
26, 15
               

               
Conread position:
               
339-585
               

               
Cow position:
               
chr1:53452510-53452747 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
20, 10
               

               
Conread position:
               
343-577
               

               
Cow position:
               
chr1:83025188-83024950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
346-585
               

               
Cow position:
               
chr1:24530481-24530716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
13, 28
               

               
Conread position:
               
349-520
               

               
Cow position:
               
chr1:19962035-19962206 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
22, 59
               

               
Conread position:
               
349-559
               

               
Cow position:
               
chr1:55753233-55753022 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
10, 36
               

               
Conread position:
               
351-572
               

               
Cow position:
               
chr1:45315652-45315422 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
10, 222
               

               
Conread position:
               
355-590
               

               
Cow position:
               
chr1:95156976-95156739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
9, 215
               

               
Conread position:
               
358-555
               

               
Cow position:
               
chr1:62034836-62034642 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
131, 74
               

               
Conread position:
               
358-555
               

               
Cow position:
               
chr1:68688575-68688772 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
164, 144
               

               
Conread position:
               
358-586
               

               
Cow position:
               
chr1:759426-759186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
129, 0
               

               
Conread position:
               
358-586
               

               
Cow position:
               
chr1:75411847-75411613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
84, 111
               

               
Conread position:
               
359-557
               

               
Cow position:
               
chr1:61011174-61011370 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
168, 124
               

               
Conread position:
               
359-562
               

               
Cow position:
               
chr1:66752636-66752432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
161, 0
               

               
Conread position:
               
360-581
               

               
Cow position:
               
chr1:93590592-93590368 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
127, 184
               

               
Conread position:
               
361-559
               

               
Cow position:
               
chr1:99605192-99604995 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
119, 182
               

               
Conread position:
               
361-581
               

               
Cow position:
               
chr1:100573633-100573413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
10, 206
               

               
Conread position:
               
370-559
               

               
Cow position:
               
chr1:42774915-42775103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
128, 17
               

               
Conread position:
               
371-558
               

               
Cow position:
               
chr1:71636320-71636132 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
23, 89
               

               
Conread position:
               
372-557
               

               
Cow position:
               
chr1:71946078-71945885 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
114, 166
               

               
Conread position:
               
372-586
               

               
Cow position:
               
chr1:70483328-70483112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
121, 111
               

               
Conread position:
               
373-586
               

               
Cow position:
               
chr1:91743453-91743241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
5, 38
               

               
Conread position:
               
375-559
               

               
Cow position:
               
chr1:55685969-55685781 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
123, 0
               

               
Conread position:
               
375-577
               

               
Cow position:
               
chr1:524817-525023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
111, 0
               

               
Conread position:
               
380-558
               

               
Cow position:
               
chr1:70416746-70416564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
106, 0
               

               
Conread position:
               
380-581
               

               
Cow position:
               
chr1:29671210-29671000 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
107, 167
               

               
Conread position:
               
381-596
               

               
Cow position:
               
chr1:102730747-102730525 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
106, 187
               

               
Conread position:
               
387-586
               

               
Cow position:
               
chr1:11708997-11708801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
99, 81
               

               
Conread position:
               
388-559
               

               
Cow position:
               
chr1:102523619-102523443 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
104, 0
               

               
Conread position:
               
388-596
               

               
Cow position:
               
chr1:62469083-62469294 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
104, 24
               

               
Conread position:
               
394-561
               

               
Cow position:
               
chr1:89835745-89835909 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
127, 90
               

               
Conread position:
               
395-582
               

               
Cow position:
               
chr1:77810731-77810542 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
13, 147
               

               
Conread position:
               
404-561
               

               
Cow position:
               
chr1:10470464-10470621 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
118, 79
               

               
Conread position:
               
407-583
               

               
Cow position:
               
chr1:19384415-19384237 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
82, 159
               

               
Conread position:
               
412-559
               

               
Cow position:
               
chr1:53474202-53474345 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
110, 27
               

               
Conread position:
               
420-559
               

               
Cow position:
               
chr1:92578779-92578637 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
72, 0
               
Show alignments to all cow chromosomes.