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Cow genome map

           
Conread name:
           
unkn-SofBand_140
        

               
Conread position:
               
122-559
               

               
Cow position:
               
chr13:12990089-12989657 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
166, 16
               

               
Conread position:
               
152-433
               

               
Cow position:
               
chr13:17815984-17815709 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
159, 23
               

               
Conread position:
               
167-486
               

               
Cow position:
               
chr13:37484072-37484408 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
140, 12
               

               
Conread position:
               
167-496
               

               
Cow position:
               
chr13:53566797-53566464 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
139, 12
               

               
Conread position:
               
168-305
               

               
Cow position:
               
chr13:14544319-14544184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
168-414
               

               
Cow position:
               
chr13:37521183-37521433 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
127, 11
               

               
Conread position:
               
168-429
               

               
Cow position:
               
chr13:24376687-24376421 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
129, 11
               

               
Conread position:
               
168-438
               

               
Cow position:
               
chr13:45604221-45604497 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
111, 11
               

               
Conread position:
               
168-442
               

               
Cow position:
               
chr13:25062607-25062328 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
139, 11
               

               
Conread position:
               
168-494
               

               
Cow position:
               
chr13:11460822-11460495 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
124, 11
               

               
Conread position:
               
168-502
               

               
Cow position:
               
chr13:6086703-6087035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
145, 12
               

               
Conread position:
               
168-556
               

               
Cow position:
               
chr13:19223846-19223449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
144, 11
               

               
Conread position:
               
168-559
               

               
Cow position:
               
chr13:19882838-19883239 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
139, 11
               

               
Conread position:
               
168-559
               

               
Cow position:
               
chr13:20784785-20784389 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
129, 11
               

               
Conread position:
               
168-559
               

               
Cow position:
               
chr13:61976766-61977163 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
143, 11
               

               
Conread position:
               
168-578
               

               
Cow position:
               
chr13:23960609-23961030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
12, 20
               

               
Conread position:
               
168-579
               

               
Cow position:
               
chr13:18166927-18166506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
145, 13
               

               
Conread position:
               
168-579
               

               
Cow position:
               
chr13:19393484-19393073 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
131, 12
               

               
Conread position:
               
168-583
               

               
Cow position:
               
chr13:15257181-15257595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
139, 11
               

               
Conread position:
               
168-595
               

               
Cow position:
               
chr13:38283787-38284213 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
145, 11
               

               
Conread position:
               
170-554
               

               
Cow position:
               
chr13:43480256-43479861 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
141, 9
               

               
Conread position:
               
171-501
               

               
Cow position:
               
chr13:2404938-2404612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
140, 28
               

               
Conread position:
               
172-538
               

               
Cow position:
               
chr13:34035562-34035189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
45, 25
               

               
Conread position:
               
176-497
               

               
Cow position:
               
chr13:15460606-15460916 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
35, 21
               

               
Conread position:
               
176-598
               

               
Cow position:
               
chr13:6189439-6189846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
8, 21
               

               
Conread position:
               
181-584
               

               
Cow position:
               
chr13:32283312-32282895 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
125, 19
               

               
Conread position:
               
181-595
               

               
Cow position:
               
chr13:5263101-5263522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
23, 16
               

               
Conread position:
               
181-595
               

               
Cow position:
               
chr13:15288740-15289158 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 16
               

               
Conread position:
               
186-432
               

               
Cow position:
               
chr13:37795624-37795383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
16, 24
               

               
Conread position:
               
186-459
               

               
Cow position:
               
chr13:39459976-39459714 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
174, 10
               

               
Conread position:
               
186-554
               

               
Cow position:
               
chr13:24369764-24369385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
111, 11
               

               
Conread position:
               
186-559
               

               
Cow position:
               
chr13:37818567-37818950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
16, 10
               

               
Conread position:
               
191-563
               

               
Cow position:
               
chr13:53574144-53573769 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
116, 6
               

               
Conread position:
               
191-586
               

               
Cow position:
               
chr13:37775052-37775436 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
82, 11
               

               
Conread position:
               
196-471
               

               
Cow position:
               
chr13:17622456-17622175 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
115, 257
               

               
Conread position:
               
196-586
               

               
Cow position:
               
chr13:44323073-44322664 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
114, 43
               

               
Conread position:
               
197-496
               

               
Cow position:
               
chr13:55316019-55316334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 14
               

               
Conread position:
               
197-556
               

               
Cow position:
               
chr13:17291960-17292330 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
111, 21
               

               
Conread position:
               
199-305
               

               
Cow position:
               
chr13:22025541-22025643 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
107
               

               
Alignm identity:
               
89
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
199-385
               

               
Cow position:
               
chr13:62474631-62474827 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
92, 158
               

               
Conread position:
               
199-419
               

               
Cow position:
               
chr13:30693869-30693652 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
100, 24
               

               
Conread position:
               
199-447
               

               
Cow position:
               
chr13:15234080-15233836 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
112, 36
               

               
Conread position:
               
199-476
               

               
Cow position:
               
chr13:6060839-6061127 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
108, 14
               

               
Conread position:
               
199-476
               

               
Cow position:
               
chr13:15528860-15529156 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
107, 0
               

               
Conread position:
               
199-479
               

               
Cow position:
               
chr13:57494015-57494311 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
60, 27
               

               
Conread position:
               
199-501
               

               
Cow position:
               
chr13:18172508-18172194 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
108, 31
               

               
Conread position:
               
199-501
               

               
Cow position:
               
chr13:20605951-20606261 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
70, 25
               

               
Conread position:
               
199-501
               

               
Cow position:
               
chr13:20706034-20706347 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 158
               

               
Conread position:
               
199-501
               

               
Cow position:
               
chr13:37804048-37803749 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
141, 26
               

               
Conread position:
               
199-501
               

               
Cow position:
               
chr13:40943416-40943099 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
106, 168
               

               
Conread position:
               
199-502
               

               
Cow position:
               
chr13:5082822-5082504 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
102, 78
               

               
Conread position:
               
199-502
               

               
Cow position:
               
chr13:23856384-23856068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
98, 198
               

               
Conread position:
               
199-555
               

               
Cow position:
               
chr13:52284077-52283707 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
75, 42
               

               
Conread position:
               
199-557
               

               
Cow position:
               
chr13:20820672-20821040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
93, 29
               

               
Conread position:
               
199-557
               

               
Cow position:
               
chr13:41806948-41806573 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 343
               

               
Conread position:
               
199-558
               

               
Cow position:
               
chr13:21287922-21288289 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
108, 27
               

               
Conread position:
               
199-559
               

               
Cow position:
               
chr13:17114211-17114586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 25
               

               
Conread position:
               
199-559
               

               
Cow position:
               
chr13:19022446-19022059 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
107, 17
               

               
Conread position:
               
199-559
               

               
Cow position:
               
chr13:27525093-27525464 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
112, 158
               

               
Conread position:
               
199-559
               

               
Cow position:
               
chr13:34261400-34261030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
91, 25
               

               
Conread position:
               
199-559
               

               
Cow position:
               
chr13:34281848-34281476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 226
               

               
Conread position:
               
199-559
               

               
Cow position:
               
chr13:42200787-42200415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
102, 42
               

               
Conread position:
               
199-559
               

               
Cow position:
               
chr13:46525274-46525634 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 9
               

               
Conread position:
               
199-561
               

               
Cow position:
               
chr13:54702359-54701974 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 353
               

               
Conread position:
               
199-569
               

               
Cow position:
               
chr13:33054223-33054589 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
80, 123
               

               
Conread position:
               
199-574
               

               
Cow position:
               
chr13:24586214-24585828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 190
               

               
Conread position:
               
199-575
               

               
Cow position:
               
chr13:971730-972117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 29
               

               
Conread position:
               
199-576
               

               
Cow position:
               
chr13:2884223-2883836 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
75, 151
               

               
Conread position:
               
199-576
               

               
Cow position:
               
chr13:37985582-37985972 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
61, 120
               

               
Conread position:
               
199-576
               

               
Cow position:
               
chr13:44202157-44201789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
98, 38
               

               
Conread position:
               
199-577
               

               
Cow position:
               
chr13:52055428-52055816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
70, 23
               

               
Conread position:
               
199-577
               

               
Cow position:
               
chr13:55674037-55674434 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
96, 144
               

               
Conread position:
               
199-578
               

               
Cow position:
               
chr13:21235517-21235893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
114, 25
               

               
Conread position:
               
199-578
               

               
Cow position:
               
chr13:23667427-23667034 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
99, 74
               

               
Conread position:
               
199-581
               

               
Cow position:
               
chr13:20666218-20666615 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
95, 34
               

               
Conread position:
               
199-581
               

               
Cow position:
               
chr13:21241924-21242305 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 19
               

               
Conread position:
               
199-582
               

               
Cow position:
               
chr13:49503360-49503763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
107, 54
               

               
Conread position:
               
199-585
               

               
Cow position:
               
chr13:38329798-38329384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 0
               

               
Conread position:
               
199-586
               

               
Cow position:
               
chr13:5758177-5758566 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
112, 27
               

               
Conread position:
               
199-586
               

               
Cow position:
               
chr13:17855542-17855134 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
108, 73
               

               
Conread position:
               
199-587
               

               
Cow position:
               
chr13:21276023-21275624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
80, 25
               

               
Conread position:
               
199-595
               

               
Cow position:
               
chr13:13261176-13260751 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
108, 230
               

               
Conread position:
               
199-596
               

               
Cow position:
               
chr13:49022702-49023108 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
106, 157
               

               
Conread position:
               
200-492
               

               
Cow position:
               
chr13:10928823-10929123 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
88, 53
               

               
Conread position:
               
200-502
               

               
Cow position:
               
chr13:45023041-45023356 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
96, 133
               

               
Conread position:
               
200-559
               

               
Cow position:
               
chr13:12670277-12670657 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
94, 0
               

               
Conread position:
               
200-577
               

               
Cow position:
               
chr13:20473520-20473898 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 152
               

               
Conread position:
               
200-583
               

               
Cow position:
               
chr13:13501452-13501841 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
94, 74
               

               
Conread position:
               
200-595
               

               
Cow position:
               
chr13:14063357-14063767 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 38
               

               
Conread position:
               
201-493
               

               
Cow position:
               
chr13:13176820-13176513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
98, 49
               

               
Conread position:
               
201-559
               

               
Cow position:
               
chr13:51528280-51528643 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
17, 38
               

               
Conread position:
               
201-586
               

               
Cow position:
               
chr13:12045168-12045575 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
70, 282
               

               
Conread position:
               
202-477
               

               
Cow position:
               
chr13:15903182-15902904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
103, 14
               

               
Conread position:
               
202-500
               

               
Cow position:
               
chr13:11644099-11643796 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
72, 17
               

               
Conread position:
               
202-501
               

               
Cow position:
               
chr13:17439601-17439910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 219
               

               
Conread position:
               
202-502
               

               
Cow position:
               
chr13:56154996-56155294 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
97, 14
               

               
Conread position:
               
202-531
               

               
Cow position:
               
chr13:23479194-23478851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 7
               

               
Conread position:
               
202-581
               

               
Cow position:
               
chr13:17021560-17021954 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
94, 149
               

               
Conread position:
               
203-586
               

               
Cow position:
               
chr13:17568930-17569329 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 206
               

               
Conread position:
               
204-559
               

               
Cow position:
               
chr13:20880759-20881126 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
103, 262
               

               
Conread position:
               
205-584
               

               
Cow position:
               
chr13:35659915-35659525 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
87, 33
               

               
Conread position:
               
206-559
               

               
Cow position:
               
chr13:54583042-54582669 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 237
               

               
Conread position:
               
206-582
               

               
Cow position:
               
chr13:19610415-19610789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 84
               

               
Conread position:
               
207-576
               

               
Cow position:
               
chr13:6974321-6973943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
68, 12
               

               
Conread position:
               
209-447
               

               
Cow position:
               
chr13:15624770-15624537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
46, 37
               

               
Conread position:
               
209-497
               

               
Cow position:
               
chr13:2774289-2773987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
102, 0
               

               
Conread position:
               
209-586
               

               
Cow position:
               
chr13:52057706-52057327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
134, 63
               

               
Conread position:
               
211-385
               

               
Cow position:
               
chr13:18215587-18215416 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
102, 66
               

               
Conread position:
               
211-413
               

               
Cow position:
               
chr13:28652959-28652747 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
87, 141
               

               
Conread position:
               
211-476
               

               
Cow position:
               
chr13:8524461-8524737 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
81, 74
               

               
Conread position:
               
211-491
               

               
Cow position:
               
chr13:48037781-48037491 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
88, 214
               

               
Conread position:
               
211-578
               

               
Cow position:
               
chr13:34263212-34263598 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
7, 22
               

               
Conread position:
               
211-585
               

               
Cow position:
               
chr13:57769856-57770216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
111, 35
               

               
Conread position:
               
213-540
               

               
Cow position:
               
chr13:61047364-61047024 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
61, 151
               

               
Conread position:
               
214-497
               

               
Cow position:
               
chr13:8355340-8355067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
147, 53
               

               
Conread position:
               
215-576
               

               
Cow position:
               
chr13:13320938-13320577 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 24
               

               
Conread position:
               
216-559
               

               
Cow position:
               
chr13:56686587-56686238 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
79, 209
               

               
Conread position:
               
217-585
               

               
Cow position:
               
chr13:152108-151734 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 147
               

               
Conread position:
               
217-597
               

               
Cow position:
               
chr13:17745393-17745020 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 218
               

               
Conread position:
               
220-559
               

               
Cow position:
               
chr13:25817668-25817324 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 26
               

               
Conread position:
               
220-575
               

               
Cow position:
               
chr13:54388870-54389243 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 33
               

               
Conread position:
               
222-502
               

               
Cow position:
               
chr13:18696991-18696696 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 51
               

               
Conread position:
               
222-553
               

               
Cow position:
               
chr13:13251277-13251611 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
48, 24
               

               
Conread position:
               
222-581
               

               
Cow position:
               
chr13:26698348-26698725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
69, 202
               

               
Conread position:
               
223-463
               

               
Cow position:
               
chr13:36352819-36353063 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
36, 18
               

               
Conread position:
               
223-589
               

               
Cow position:
               
chr13:11808706-11808348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
74, 125
               

               
Conread position:
               
224-490
               

               
Cow position:
               
chr13:31814018-31813742 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
84, 0
               

               
Conread position:
               
224-558
               

               
Cow position:
               
chr13:45594050-45593719 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
45, 20
               

               
Conread position:
               
224-580
               

               
Cow position:
               
chr13:5671445-5671813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 41
               

               
Conread position:
               
224-586
               

               
Cow position:
               
chr13:2823006-2822636 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
72, 48
               

               
Conread position:
               
224-586
               

               
Cow position:
               
chr13:20879684-20880055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
45, 131
               

               
Conread position:
               
225-575
               

               
Cow position:
               
chr13:8374626-8374981 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
82, 208
               

               
Conread position:
               
226-368
               

               
Cow position:
               
chr13:29122691-29122833 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
132, 62
               

               
Conread position:
               
226-409
               

               
Cow position:
               
chr13:20440444-20440633 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
70, 51
               

               
Conread position:
               
226-481
               

               
Cow position:
               
chr13:17966064-17966333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
81, 128
               

               
Conread position:
               
226-494
               

               
Cow position:
               
chr13:18835337-18835067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
85, 107
               

               
Conread position:
               
226-557
               

               
Cow position:
               
chr13:47007585-47007916 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
73, 105
               

               
Conread position:
               
226-577
               

               
Cow position:
               
chr13:35526066-35526414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
68, 31
               

               
Conread position:
               
226-580
               

               
Cow position:
               
chr13:48598055-48597684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
53, 181
               

               
Conread position:
               
226-589
               

               
Cow position:
               
chr13:18058104-18058480 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 21
               

               
Conread position:
               
228-499
               

               
Cow position:
               
chr13:11381579-11381866 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
228-541
               

               
Cow position:
               
chr13:21176179-21176501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
68, 133
               

               
Conread position:
               
228-577
               

               
Cow position:
               
chr13:20360413-20360051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
77, 135
               

               
Conread position:
               
229-479
               

               
Cow position:
               
chr13:47356772-47356530 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
80, 17
               

               
Conread position:
               
229-589
               

               
Cow position:
               
chr13:11260410-11260042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
40, 12
               

               
Conread position:
               
230-559
               

               
Cow position:
               
chr13:22085604-22085937 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
77, 13
               

               
Conread position:
               
232-501
               

               
Cow position:
               
chr13:51115889-51116167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
81, 261
               

               
Conread position:
               
234-562
               

               
Cow position:
               
chr13:20288466-20288130 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
61, 13
               

               
Conread position:
               
235-442
               

               
Cow position:
               
chr13:890036-890254 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
54, 169
               

               
Conread position:
               
235-559
               

               
Cow position:
               
chr13:17821132-17821463 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
72, 260
               

               
Conread position:
               
240-559
               

               
Cow position:
               
chr13:58763501-58763814 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
67, 106
               

               
Conread position:
               
243-447
               

               
Cow position:
               
chr13:15144244-15144456 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
244-593
               

               
Cow position:
               
chr13:14576334-14575978 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
9, 210
               

               
Conread position:
               
252-557
               

               
Cow position:
               
chr13:15194613-15194924 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
55, 247
               

               
Conread position:
               
252-586
               

               
Cow position:
               
chr13:19279209-19278862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 7
               

               
Conread position:
               
256-491
               

               
Cow position:
               
chr13:11820709-11820465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
51, 88
               

               
Conread position:
               
263-585
               

               
Cow position:
               
chr13:54128502-54128832 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
30, 44
               

               
Conread position:
               
268-592
               

               
Cow position:
               
chr13:21171483-21171810 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
28, 22
               

               
Conread position:
               
269-560
               

               
Cow position:
               
chr13:20534983-20534694 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
44, 84
               

               
Conread position:
               
278-496
               

               
Cow position:
               
chr13:23526202-23525973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
20, 142
               

               
Conread position:
               
297-496
               

               
Cow position:
               
chr13:47022423-47022227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
62, 38
               

               
Conread position:
               
299-470
               

               
Cow position:
               
chr13:48862038-48862208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
44, 113
               

               
Conread position:
               
299-471
               

               
Cow position:
               
chr13:29123363-29123190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
105, 0
               

               
Conread position:
               
299-479
               

               
Cow position:
               
chr13:18181715-18181897 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
299-501
               

               
Cow position:
               
chr13:19320593-19320388 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
299-501
               

               
Cow position:
               
chr13:50750996-50751200 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
39, 168
               

               
Conread position:
               
299-556
               

               
Cow position:
               
chr13:13196299-13196039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
60, 219
               

               
Conread position:
               
299-556
               

               
Cow position:
               
chr13:20868698-20868948 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
111, 15
               

               
Conread position:
               
299-559
               

               
Cow position:
               
chr13:21135842-21136117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
299-559
               

               
Cow position:
               
chr13:36877109-36876860 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
223, 54
               

               
Conread position:
               
299-559
               

               
Cow position:
               
chr13:46329546-46329808 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
41, 249
               

               
Conread position:
               
299-577
               

               
Cow position:
               
chr13:21170587-21170306 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 186
               

               
Conread position:
               
299-578
               

               
Cow position:
               
chr13:18197549-18197834 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
45, 79
               

               
Conread position:
               
299-581
               

               
Cow position:
               
chr13:20314561-20314853 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
21, 187
               

               
Conread position:
               
301-487
               

               
Cow position:
               
chr13:20679395-20679209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
43, 35
               

               
Conread position:
               
301-501
               

               
Cow position:
               
chr13:9981785-9981985 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
43, 95
               

               
Conread position:
               
301-559
               

               
Cow position:
               
chr13:15757176-15756911 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
59, 48
               

               
Conread position:
               
302-493
               

               
Cow position:
               
chr13:8402111-8401921 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
42, 113
               

               
Conread position:
               
302-584
               

               
Cow position:
               
chr13:11103136-11103436 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
42, 281
               

               
Conread position:
               
302-596
               

               
Cow position:
               
chr13:19007987-19007703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
42, 104
               

               
Conread position:
               
305-577
               

               
Cow position:
               
chr13:17089471-17089737 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
54, 26
               

               
Conread position:
               
305-584
               

               
Cow position:
               
chr13:16020904-16020632 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
55, 98
               

               
Conread position:
               
308-558
               

               
Cow position:
               
chr13:15239471-15239716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
184, 35
               

               
Conread position:
               
308-559
               

               
Cow position:
               
chr13:35557056-35557316 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
308-559
               

               
Cow position:
               
chr13:45073202-45073451 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
5, 107
               

               
Conread position:
               
308-576
               

               
Cow position:
               
chr13:17611501-17611777 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
312-574
               

               
Cow position:
               
chr13:20217350-20217617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 256
               

               
Conread position:
               
313-552
               

               
Cow position:
               
chr13:29663074-29662838 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
37, 56
               

               
Conread position:
               
314-559
               

               
Cow position:
               
chr13:28440492-28440738 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
23, 100
               

               
Conread position:
               
314-571
               

               
Cow position:
               
chr13:55494477-55494735 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
20, 175
               

               
Conread position:
               
321-559
               

               
Cow position:
               
chr13:38035872-38035634 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
39, 91
               

               
Conread position:
               
330-589
               

               
Cow position:
               
chr13:45439548-45439296 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
29, 14
               

               
Conread position:
               
331-501
               

               
Cow position:
               
chr13:8350348-8350178 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
149, 23
               

               
Conread position:
               
333-556
               

               
Cow position:
               
chr13:57985915-57986134 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
28, 7
               

               
Conread position:
               
336-499
               

               
Cow position:
               
chr13:37621338-37621499 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
27, 76
               

               
Conread position:
               
337-559
               

               
Cow position:
               
chr13:56535476-56535262 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
22, 58
               

               
Conread position:
               
349-486
               

               
Cow position:
               
chr13:48465827-48465960 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
12, 63
               

               
Conread position:
               
349-494
               

               
Cow position:
               
chr13:3209312-3209456 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
109, 135
               

               
Conread position:
               
349-559
               

               
Cow position:
               
chr13:19598657-19598870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
138, 0
               

               
Conread position:
               
349-559
               

               
Cow position:
               
chr13:37614182-37614403 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
42, 139
               

               
Conread position:
               
349-561
               

               
Cow position:
               
chr13:14645060-14644846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
10, 41
               

               
Conread position:
               
356-559
               

               
Cow position:
               
chr13:18092874-18093074 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
130, 64
               

               
Conread position:
               
358-559
               

               
Cow position:
               
chr13:8450329-8450128 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
164, 126
               

               
Conread position:
               
359-589
               

               
Cow position:
               
chr13:10210661-10210890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
130, 32
               

               
Conread position:
               
361-572
               

               
Cow position:
               
chr13:18340529-18340312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
121, 0
               

               
Conread position:
               
370-559
               

               
Cow position:
               
chr13:49283793-49283983 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
84, 76
               

               
Conread position:
               
370-559
               

               
Cow position:
               
chr13:53850811-53850615 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
121, 112
               

               
Conread position:
               
371-594
               

               
Cow position:
               
chr13:33854698-33854918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
116, 173
               

               
Conread position:
               
372-586
               

               
Cow position:
               
chr13:51249395-51249612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
108, 148
               

               
Conread position:
               
375-575
               

               
Cow position:
               
chr13:21277485-21277679 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
147, 108
               

               
Conread position:
               
377-557
               

               
Cow position:
               
chr13:52913853-52913673 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
143, 115
               

               
Conread position:
               
377-559
               

               
Cow position:
               
chr13:37554894-37555076 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
145, 31
               

               
Conread position:
               
378-532
               

               
Cow position:
               
chr13:16790188-16790036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
144, 105
               

               
Conread position:
               
381-556
               

               
Cow position:
               
chr13:55775335-55775163 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
73, 6
               

               
Conread position:
               
382-577
               

               
Cow position:
               
chr13:22345302-22345499 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
139, 29
               

               
Conread position:
               
394-576
               

               
Cow position:
               
chr13:11565800-11565618 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
128, 170
               

               
Conread position:
               
402-572
               

               
Cow position:
               
chr13:37405666-37405496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
403-577
               

               
Cow position:
               
chr13:23399720-23399543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
84, 0
               

               
Conread position:
               
407-589
               

               
Cow position:
               
chr13:23823084-23823267 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
115, 42
               
Show alignments to all cow chromosomes.