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Cow genome map

           
Conread name:
           
unkn-SofBand_140
        

               
Conread position:
               
167-501
               

               
Cow position:
               
chr17:24821694-24822029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
140, 12
               

               
Conread position:
               
168-310
               

               
Cow position:
               
chr17:37482250-37482107 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
56, 7
               

               
Conread position:
               
168-395
               

               
Cow position:
               
chr17:34207991-34207751 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
127, 11
               

               
Conread position:
               
168-404
               

               
Cow position:
               
chr17:3306696-3306931 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
139, 11
               

               
Conread position:
               
168-460
               

               
Cow position:
               
chr17:38646893-38647190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
139, 11
               

               
Conread position:
               
168-496
               

               
Cow position:
               
chr17:18592269-18592606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
139, 11
               

               
Conread position:
               
168-499
               

               
Cow position:
               
chr17:21335869-21335527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
139, 11
               

               
Conread position:
               
168-501
               

               
Cow position:
               
chr17:1410414-1410069 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
127, 11
               

               
Conread position:
               
168-502
               

               
Cow position:
               
chr17:32366113-32366462 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
138, 7
               

               
Conread position:
               
168-509
               

               
Cow position:
               
chr17:11381891-11381548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
16, 11
               

               
Conread position:
               
168-559
               

               
Cow position:
               
chr17:24787192-24786793 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
127, 11
               

               
Conread position:
               
168-569
               

               
Cow position:
               
chr17:21115119-21114714 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
139, 13
               

               
Conread position:
               
168-577
               

               
Cow position:
               
chr17:10459107-10458682 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
124, 11
               

               
Conread position:
               
168-578
               

               
Cow position:
               
chr17:20090792-20090378 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
145, 11
               

               
Conread position:
               
168-578
               

               
Cow position:
               
chr17:24973780-24974195 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
145, 11
               

               
Conread position:
               
168-583
               

               
Cow position:
               
chr17:11664762-11664320 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
131, 11
               

               
Conread position:
               
168-588
               

               
Cow position:
               
chr17:1256675-1256237 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
100, 11
               

               
Conread position:
               
168-595
               

               
Cow position:
               
chr17:43717484-43717066 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
176, 11
               

               
Conread position:
               
176-554
               

               
Cow position:
               
chr17:5423237-5422851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
118, 21
               

               
Conread position:
               
180-492
               

               
Cow position:
               
chr17:21243947-21243631 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
116, 19
               

               
Conread position:
               
181-438
               

               
Cow position:
               
chr17:2584536-2584806 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
89, 13
               

               
Conread position:
               
181-553
               

               
Cow position:
               
chr17:39771237-39771628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
91, 15
               

               
Conread position:
               
182-575
               

               
Cow position:
               
chr17:31037538-31037131 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
114, 15
               

               
Conread position:
               
186-401
               

               
Cow position:
               
chr17:21323133-21323346 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
12, 39
               

               
Conread position:
               
186-585
               

               
Cow position:
               
chr17:38614802-38615219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
86, 11
               

               
Conread position:
               
196-501
               

               
Cow position:
               
chr17:9911620-9911925 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
111, 30
               

               
Conread position:
               
196-559
               

               
Cow position:
               
chr17:33288799-33288426 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
103, 20
               

               
Conread position:
               
196-583
               

               
Cow position:
               
chr17:5767769-5768150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 34
               

               
Conread position:
               
196-595
               

               
Cow position:
               
chr17:11035778-11036179 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
72, 28
               

               
Conread position:
               
197-501
               

               
Cow position:
               
chr17:24553860-24554167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 114
               

               
Conread position:
               
199-352
               

               
Cow position:
               
chr17:21207277-21207111 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
97, 85
               

               
Conread position:
               
199-381
               

               
Cow position:
               
chr17:12216219-12216033 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
112, 0
               

               
Conread position:
               
199-435
               

               
Cow position:
               
chr17:37163669-37163426 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
75, 96
               

               
Conread position:
               
199-437
               

               
Cow position:
               
chr17:31701295-31701537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
67, 35
               

               
Conread position:
               
199-442
               

               
Cow position:
               
chr17:25541955-25541706 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
84, 25
               

               
Conread position:
               
199-479
               

               
Cow position:
               
chr17:22032836-22032547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
112, 123
               

               
Conread position:
               
199-491
               

               
Cow position:
               
chr17:12591021-12591334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
97, 0
               

               
Conread position:
               
199-493
               

               
Cow position:
               
chr17:25032614-25032322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
66, 111
               

               
Conread position:
               
199-494
               

               
Cow position:
               
chr17:20990336-20990029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
112, 25
               

               
Conread position:
               
199-499
               

               
Cow position:
               
chr17:40331623-40331930 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
79, 27
               

               
Conread position:
               
199-501
               

               
Cow position:
               
chr17:17405996-17406303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
102, 47
               

               
Conread position:
               
199-502
               

               
Cow position:
               
chr17:9117501-9117811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
98, 153
               

               
Conread position:
               
199-538
               

               
Cow position:
               
chr17:18473034-18473374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
114, 35
               

               
Conread position:
               
199-554
               

               
Cow position:
               
chr17:23101353-23100995 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 79
               

               
Conread position:
               
199-555
               

               
Cow position:
               
chr17:1063047-1063396 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
96, 23
               

               
Conread position:
               
199-557
               

               
Cow position:
               
chr17:7810881-7810517 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 146
               

               
Conread position:
               
199-558
               

               
Cow position:
               
chr17:32279049-32278673 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
113, 46
               

               
Conread position:
               
199-559
               

               
Cow position:
               
chr17:24824110-24824478 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
96, 25
               

               
Conread position:
               
199-559
               

               
Cow position:
               
chr17:24883710-24883338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
114, 16
               

               
Conread position:
               
199-559
               

               
Cow position:
               
chr17:25128492-25128122 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
96, 46
               

               
Conread position:
               
199-559
               

               
Cow position:
               
chr17:26818595-26818240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
109, 173
               

               
Conread position:
               
199-559
               

               
Cow position:
               
chr17:32419260-32418885 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
92, 171
               

               
Conread position:
               
199-572
               

               
Cow position:
               
chr17:25901053-25901452 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 10
               

               
Conread position:
               
199-575
               

               
Cow position:
               
chr17:21003973-21003582 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
96, 39
               

               
Conread position:
               
199-577
               

               
Cow position:
               
chr17:9853844-9854232 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
89, 150
               

               
Conread position:
               
199-577
               

               
Cow position:
               
chr17:13922333-13922732 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
99, 306
               

               
Conread position:
               
199-577
               

               
Cow position:
               
chr17:30713204-30713596 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
8.00141e-43
               

               
Alignm gaps (pig, cow):
               
97, 17
               

               
Conread position:
               
199-578
               

               
Cow position:
               
chr17:4106128-4105742 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
97, 27
               

               
Conread position:
               
199-578
               

               
Cow position:
               
chr17:4121864-4121477 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
8.96831e-44
               

               
Alignm gaps (pig, cow):
               
97, 27
               

               
Conread position:
               
199-585
               

               
Cow position:
               
chr17:32027604-32027190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
75, 169
               

               
Conread position:
               
199-591
               

               
Cow position:
               
chr17:15103030-15102627 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 127
               

               
Conread position:
               
200-554
               

               
Cow position:
               
chr17:12536609-12536247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
94, 26
               

               
Conread position:
               
200-559
               

               
Cow position:
               
chr17:27429437-27429788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
8.00141e-43
               

               
Alignm gaps (pig, cow):
               
86, 191
               

               
Conread position:
               
201-447
               

               
Cow position:
               
chr17:4967970-4968228 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
93, 151
               

               
Conread position:
               
201-559
               

               
Cow position:
               
chr17:24587478-24587855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
202-497
               

               
Cow position:
               
chr17:32554165-32553891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
202-559
               

               
Cow position:
               
chr17:20022661-20022282 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
202-576
               

               
Cow position:
               
chr17:25611954-25612338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
109, 24
               

               
Conread position:
               
203-559
               

               
Cow position:
               
chr17:32138554-32138184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 11
               

               
Conread position:
               
205-494
               

               
Cow position:
               
chr17:26764877-26765184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
90, 129
               

               
Conread position:
               
205-559
               

               
Cow position:
               
chr17:1562910-1562559 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
109, 40
               

               
Conread position:
               
205-561
               

               
Cow position:
               
chr17:908610-908973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
84, 21
               

               
Conread position:
               
205-576
               

               
Cow position:
               
chr17:41290158-41289795 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
103, 19
               

               
Conread position:
               
206-479
               

               
Cow position:
               
chr17:27142621-27142893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
105, 114
               

               
Conread position:
               
206-502
               

               
Cow position:
               
chr17:25097324-25097623 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
90, 146
               

               
Conread position:
               
206-599
               

               
Cow position:
               
chr17:30728382-30728782 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 67
               

               
Conread position:
               
207-558
               

               
Cow position:
               
chr17:32280531-32280899 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
105, 38
               

               
Conread position:
               
208-577
               

               
Cow position:
               
chr17:6423624-6424005 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 278
               

               
Conread position:
               
209-586
               

               
Cow position:
               
chr17:3577406-3577783 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
102, 259
               

               
Conread position:
               
210-527
               

               
Cow position:
               
chr17:18109222-18108886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
8, 217
               

               
Conread position:
               
210-577
               

               
Cow position:
               
chr17:40673251-40673621 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
8.00141e-43
               

               
Alignm gaps (pig, cow):
               
65, 105
               

               
Conread position:
               
211-574
               

               
Cow position:
               
chr17:20993174-20992793 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
68, 195
               

               
Conread position:
               
211-584
               

               
Cow position:
               
chr17:32993749-32993369 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
94, 29
               

               
Conread position:
               
211-585
               

               
Cow position:
               
chr17:12325881-12325512 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
150, 97
               

               
Conread position:
               
212-577
               

               
Cow position:
               
chr17:3202537-3202163 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
18, 166
               

               
Conread position:
               
212-586
               

               
Cow position:
               
chr17:6318990-6318611 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
90, 140
               

               
Conread position:
               
215-518
               

               
Cow position:
               
chr17:18495650-18495329 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
9, 27
               

               
Conread position:
               
216-502
               

               
Cow position:
               
chr17:32273814-32273518 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
79, 18
               

               
Conread position:
               
216-559
               

               
Cow position:
               
chr17:8837078-8836719 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
81, 208
               

               
Conread position:
               
216-594
               

               
Cow position:
               
chr17:29715315-29714951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 109
               

               
Conread position:
               
220-481
               

               
Cow position:
               
chr17:39736056-39736324 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
74, 53
               

               
Conread position:
               
221-595
               

               
Cow position:
               
chr17:36791008-36791394 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
15, 184
               

               
Conread position:
               
223-559
               

               
Cow position:
               
chr17:11216013-11215661 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
84, 193
               

               
Conread position:
               
224-470
               

               
Cow position:
               
chr17:3503461-3503720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
72, 49
               

               
Conread position:
               
224-552
               

               
Cow position:
               
chr17:45296313-45296631 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
134, 30
               

               
Conread position:
               
224-582
               

               
Cow position:
               
chr17:20157490-20157863 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
8.96831e-44
               

               
Alignm gaps (pig, cow):
               
82, 193
               

               
Conread position:
               
224-599
               

               
Cow position:
               
chr17:33793057-33793425 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
77, 59
               

               
Conread position:
               
225-482
               

               
Cow position:
               
chr17:33658190-33657918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
82, 237
               

               
Conread position:
               
225-497
               

               
Cow position:
               
chr17:265557-265836 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
81, 21
               

               
Conread position:
               
225-559
               

               
Cow position:
               
chr17:33933863-33933516 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 26
               

               
Conread position:
               
226-501
               

               
Cow position:
               
chr17:4225612-4225335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
80, 123
               

               
Conread position:
               
226-502
               

               
Cow position:
               
chr17:29157298-29157585 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
71, 201
               

               
Conread position:
               
226-578
               

               
Cow position:
               
chr17:5000697-5000351 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
85, 164
               

               
Conread position:
               
226-579
               

               
Cow position:
               
chr17:1634606-1634243 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 18
               

               
Conread position:
               
226-581
               

               
Cow position:
               
chr17:17059314-17059669 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 47
               

               
Conread position:
               
226-584
               

               
Cow position:
               
chr17:32989366-32989730 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 14
               

               
Conread position:
               
226-585
               

               
Cow position:
               
chr17:3467648-3468008 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
79, 120
               

               
Conread position:
               
226-588
               

               
Cow position:
               
chr17:3388734-3389098 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
122, 18
               

               
Conread position:
               
227-575
               

               
Cow position:
               
chr17:31856545-31856917 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
41, 246
               

               
Conread position:
               
228-479
               

               
Cow position:
               
chr17:1040629-1040892 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
78, 129
               

               
Conread position:
               
228-492
               

               
Cow position:
               
chr17:39857276-39857544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
45, 125
               

               
Conread position:
               
228-556
               

               
Cow position:
               
chr17:28285147-28284807 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
70, 232
               

               
Conread position:
               
230-559
               

               
Cow position:
               
chr17:13244156-13243822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
13, 187
               

               
Conread position:
               
230-559
               

               
Cow position:
               
chr17:23563904-23563580 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
81, 25
               

               
Conread position:
               
230-559
               

               
Cow position:
               
chr17:24004268-24004605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
68, 113
               

               
Conread position:
               
230-578
               

               
Cow position:
               
chr17:24559178-24559546 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
45, 224
               

               
Conread position:
               
230-590
               

               
Cow position:
               
chr17:29084074-29084427 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
11, 115
               

               
Conread position:
               
231-501
               

               
Cow position:
               
chr17:35339029-35338749 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
82, 0
               

               
Conread position:
               
231-588
               

               
Cow position:
               
chr17:36179135-36178788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
44, 83
               

               
Conread position:
               
238-548
               

               
Cow position:
               
chr17:40851876-40852189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
57, 104
               

               
Conread position:
               
238-559
               

               
Cow position:
               
chr17:11832226-11831886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
241-501
               

               
Cow position:
               
chr17:15340856-15340584 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
64, 109
               

               
Conread position:
               
243-595
               

               
Cow position:
               
chr17:25616157-25616514 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
8.00001e-42
               

               
Alignm gaps (pig, cow):
               
78, 70
               

               
Conread position:
               
245-559
               

               
Cow position:
               
chr17:35573663-35573979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
62, 110
               

               
Conread position:
               
246-559
               

               
Cow position:
               
chr17:11912596-11912273 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
248-576
               

               
Cow position:
               
chr17:36864534-36864871 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
63, 248
               

               
Conread position:
               
249-501
               

               
Cow position:
               
chr17:5053604-5053842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
249-556
               

               
Cow position:
               
chr17:25514219-25513889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
46, 129
               

               
Conread position:
               
257-557
               

               
Cow position:
               
chr17:25342828-25342510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
22, 205
               

               
Conread position:
               
280-559
               

               
Cow position:
               
chr17:8949015-8948735 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
8.00001e-42
               

               
Alignm gaps (pig, cow):
               
66, 27
               

               
Conread position:
               
298-559
               

               
Cow position:
               
chr17:40412553-40412811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
224, 63
               

               
Conread position:
               
299-447
               

               
Cow position:
               
chr17:21478954-21478806 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
48, 114
               

               
Conread position:
               
299-496
               

               
Cow position:
               
chr17:38263525-38263326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
46, 187
               

               
Conread position:
               
299-554
               

               
Cow position:
               
chr17:36330990-36330740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
59, 122
               

               
Conread position:
               
299-555
               

               
Cow position:
               
chr17:32471816-32471560 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
8.00141e-43
               

               
Alignm gaps (pig, cow):
               
34, 187
               

               
Conread position:
               
299-558
               

               
Cow position:
               
chr17:26513155-26513422 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
39, 254
               

               
Conread position:
               
299-558
               

               
Cow position:
               
chr17:39606398-39606653 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
39, 15
               

               
Conread position:
               
299-559
               

               
Cow position:
               
chr17:5372561-5372300 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 186
               

               
Conread position:
               
299-559
               

               
Cow position:
               
chr17:32333124-32332860 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
8.00141e-43
               

               
Alignm gaps (pig, cow):
               
59, 41
               

               
Conread position:
               
299-559
               

               
Cow position:
               
chr17:40250393-40250642 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
48, 114
               

               
Conread position:
               
299-566
               

               
Cow position:
               
chr17:40638918-40639185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
180, 59
               

               
Conread position:
               
299-575
               

               
Cow position:
               
chr17:1025852-1025585 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
127, 38
               

               
Conread position:
               
299-575
               

               
Cow position:
               
chr17:25126320-25126593 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
61, 40
               

               
Conread position:
               
299-577
               

               
Cow position:
               
chr17:9824637-9824918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
61, 43
               

               
Conread position:
               
299-594
               

               
Cow position:
               
chr17:20848491-20848786 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
39, 11
               

               
Conread position:
               
299-595
               

               
Cow position:
               
chr17:25800914-25800615 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 41
               

               
Conread position:
               
299-599
               

               
Cow position:
               
chr17:3153603-3153300 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
60, 23
               

               
Conread position:
               
300-577
               

               
Cow position:
               
chr17:21325302-21325595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
58, 20
               

               
Conread position:
               
300-578
               

               
Cow position:
               
chr17:18934226-18934506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
51, 115
               

               
Conread position:
               
300-585
               

               
Cow position:
               
chr17:21039531-21039812 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
200, 45
               

               
Conread position:
               
300-592
               

               
Cow position:
               
chr17:22051623-22051329 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
68, 268
               

               
Conread position:
               
301-471
               

               
Cow position:
               
chr17:11368881-11368710 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
42, 136
               

               
Conread position:
               
301-488
               

               
Cow position:
               
chr17:21758168-21757984 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
58, 34
               

               
Conread position:
               
301-501
               

               
Cow position:
               
chr17:22017117-22016921 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
40, 135
               

               
Conread position:
               
301-502
               

               
Cow position:
               
chr17:23516972-23516774 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
32, 49
               

               
Conread position:
               
302-498
               

               
Cow position:
               
chr17:40406415-40406611 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
34, 66
               

               
Conread position:
               
302-583
               

               
Cow position:
               
chr17:34791095-34790807 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
302-586
               

               
Cow position:
               
chr17:17044362-17044079 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
52, 38
               

               
Conread position:
               
305-560
               

               
Cow position:
               
chr17:25511216-25511475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
35, 124
               

               
Conread position:
               
305-577
               

               
Cow position:
               
chr17:8815164-8815437 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
31, 170
               

               
Conread position:
               
305-588
               

               
Cow position:
               
chr17:29995464-29995176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 269
               

               
Conread position:
               
308-556
               

               
Cow position:
               
chr17:26575254-26574993 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
308-584
               

               
Cow position:
               
chr17:12959082-12959358 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
31, 176
               

               
Conread position:
               
309-507
               

               
Cow position:
               
chr17:18848183-18847984 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
29, 167
               

               
Conread position:
               
309-561
               

               
Cow position:
               
chr17:33164839-33164586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
30, 75
               

               
Conread position:
               
309-583
               

               
Cow position:
               
chr17:12510994-12510731 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
14, 50
               

               
Conread position:
               
311-574
               

               
Cow position:
               
chr17:25473300-25473035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
50, 26
               

               
Conread position:
               
312-501
               

               
Cow position:
               
chr17:24163018-24163204 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
27, 82
               

               
Conread position:
               
313-491
               

               
Cow position:
               
chr17:11478747-11478928 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
18, 169
               

               
Conread position:
               
314-559
               

               
Cow position:
               
chr17:9932319-9932079 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
36, 172
               

               
Conread position:
               
315-493
               

               
Cow position:
               
chr17:30212869-30213046 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
30, 70
               

               
Conread position:
               
319-559
               

               
Cow position:
               
chr17:37341053-37340799 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
326-577
               

               
Cow position:
               
chr17:21466269-21466007 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
327-589
               

               
Cow position:
               
chr17:21472185-21471921 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
17, 106
               

               
Conread position:
               
329-586
               

               
Cow position:
               
chr17:7959177-7959441 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
22, 16
               

               
Conread position:
               
335-565
               

               
Cow position:
               
chr17:42150394-42150626 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
335-582
               

               
Cow position:
               
chr17:40276744-40276993 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
23, 5
               

               
Conread position:
               
340-559
               

               
Cow position:
               
chr17:43315278-43315058 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
19, 49
               

               
Conread position:
               
349-584
               

               
Cow position:
               
chr17:17034966-17035203 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
10, 165
               

               
Conread position:
               
359-559
               

               
Cow position:
               
chr17:946385-946588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
128, 0
               

               
Conread position:
               
360-501
               

               
Cow position:
               
chr17:9713313-9713174 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
123, 0
               

               
Conread position:
               
360-586
               

               
Cow position:
               
chr17:20929270-20929504 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
91, 83
               

               
Conread position:
               
360-588
               

               
Cow position:
               
chr17:30501786-30501550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
72, 187
               

               
Conread position:
               
370-588
               

               
Cow position:
               
chr17:21718958-21718735 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
120, 112
               

               
Conread position:
               
372-579
               

               
Cow position:
               
chr17:12963566-12963361 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
150, 84
               

               
Conread position:
               
375-557
               

               
Cow position:
               
chr17:44234294-44234475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
146, 108
               

               
Conread position:
               
375-559
               

               
Cow position:
               
chr17:21676934-21677123 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
117, 0
               

               
Conread position:
               
378-559
               

               
Cow position:
               
chr17:10016326-10016509 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
108, 68
               

               
Conread position:
               
384-559
               

               
Cow position:
               
chr17:7711490-7711668 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
105, 0
               

               
Conread position:
               
397-553
               

               
Cow position:
               
chr17:20881743-20881589 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
125, 145
               

               
Conread position:
               
403-585
               

               
Cow position:
               
chr17:30977092-30977274 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
119, 131
               

               
Conread position:
               
408-594
               

               
Cow position:
               
chr17:9260535-9260344 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
78, 181
               

               
Conread position:
               
426-577
               

               
Cow position:
               
chr17:8809410-8809258 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
96, 0
               

               
Conread position:
               
428-574
               

               
Cow position:
               
chr17:24612747-24612891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
94, 55
               

               
Conread position:
               
429-587
               

               
Cow position:
               
chr17:20783096-20782938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
93, 135
               
Show alignments to all cow chromosomes.