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Cow genome map

           
Conread name:
           
unkn-SofBand_140
        

               
Conread position:
               
112-588
               

               
Cow position:
               
chr21:6051302-6051786 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
494
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
29, 5
               

               
Conread position:
               
167-440
               

               
Cow position:
               
chr21:16187956-16187675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
139, 30
               

               
Conread position:
               
168-304
               

               
Cow position:
               
chr21:14125897-14126030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
168-355
               

               
Cow position:
               
chr21:393873-394065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
129, 11
               

               
Conread position:
               
168-385
               

               
Cow position:
               
chr21:12961051-12960821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
142, 7
               

               
Conread position:
               
168-495
               

               
Cow position:
               
chr21:42348826-42348511 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
143, 13
               

               
Conread position:
               
168-495
               

               
Cow position:
               
chr21:44826032-44825701 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
140, 6
               

               
Conread position:
               
168-500
               

               
Cow position:
               
chr21:29484835-29485168 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
128, 11
               

               
Conread position:
               
168-501
               

               
Cow position:
               
chr21:36795455-36795796 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
143, 11
               

               
Conread position:
               
168-557
               

               
Cow position:
               
chr21:29069477-29069070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
128, 11
               

               
Conread position:
               
168-559
               

               
Cow position:
               
chr21:37299319-37299715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 30
               

               
Conread position:
               
168-574
               

               
Cow position:
               
chr21:23822019-23822422 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
143, 7
               

               
Conread position:
               
168-577
               

               
Cow position:
               
chr21:44251974-44251570 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
137, 11
               

               
Conread position:
               
168-585
               

               
Cow position:
               
chr21:20262482-20262066 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
129, 11
               

               
Conread position:
               
168-585
               

               
Cow position:
               
chr21:46849271-46848851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
62, 11
               

               
Conread position:
               
174-559
               

               
Cow position:
               
chr21:37479812-37480219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
6, 23
               

               
Conread position:
               
177-595
               

               
Cow position:
               
chr21:34653931-34654362 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 24
               

               
Conread position:
               
179-310
               

               
Cow position:
               
chr21:31159118-31159251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
85, 18
               

               
Conread position:
               
180-390
               

               
Cow position:
               
chr21:14515708-14515923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
59, 17
               

               
Conread position:
               
180-489
               

               
Cow position:
               
chr21:12723019-12723332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
116, 17
               

               
Conread position:
               
180-586
               

               
Cow position:
               
chr21:24598524-24598925 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
131, 17
               

               
Conread position:
               
181-438
               

               
Cow position:
               
chr21:30616742-30617002 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
89, 13
               

               
Conread position:
               
181-461
               

               
Cow position:
               
chr21:42540357-42540069 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
58, 16
               

               
Conread position:
               
186-481
               

               
Cow position:
               
chr21:21077189-21077482 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
14, 155
               

               
Conread position:
               
186-577
               

               
Cow position:
               
chr21:12462102-12461696 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
125, 11
               

               
Conread position:
               
186-586
               

               
Cow position:
               
chr21:42135755-42135332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
113, 11
               

               
Conread position:
               
190-586
               

               
Cow position:
               
chr21:24343397-24342983 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
83, 279
               

               
Conread position:
               
197-438
               

               
Cow position:
               
chr21:13488398-13488657 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
98, 45
               

               
Conread position:
               
199-419
               

               
Cow position:
               
chr21:44733281-44733062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
163, 78
               

               
Conread position:
               
199-429
               

               
Cow position:
               
chr21:7132582-7132361 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
108, 59
               

               
Conread position:
               
199-442
               

               
Cow position:
               
chr21:28442625-28442866 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
114, 31
               

               
Conread position:
               
199-447
               

               
Cow position:
               
chr21:15611032-15611279 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
85, 20
               

               
Conread position:
               
199-447
               

               
Cow position:
               
chr21:19363583-19363320 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
98, 42
               

               
Conread position:
               
199-449
               

               
Cow position:
               
chr21:725011-724744 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
37, 226
               

               
Conread position:
               
199-460
               

               
Cow position:
               
chr21:18845139-18844860 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
199-476
               

               
Cow position:
               
chr21:2679433-2679716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
96, 165
               

               
Conread position:
               
199-479
               

               
Cow position:
               
chr21:38120988-38121272 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
8.99634e-43
               

               
Alignm gaps (pig, cow):
               
100, 31
               

               
Conread position:
               
199-490
               

               
Cow position:
               
chr21:25764515-25764815 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
106, 131
               

               
Conread position:
               
199-495
               

               
Cow position:
               
chr21:42384386-42384694 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
80, 155
               

               
Conread position:
               
199-497
               

               
Cow position:
               
chr21:27569280-27568986 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
83, 23
               

               
Conread position:
               
199-500
               

               
Cow position:
               
chr21:32237178-32237470 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
80, 25
               

               
Conread position:
               
199-500
               

               
Cow position:
               
chr21:47760656-47760960 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
75, 149
               

               
Conread position:
               
199-501
               

               
Cow position:
               
chr21:46919-47231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
52, 259
               

               
Conread position:
               
199-501
               

               
Cow position:
               
chr21:28923997-28924301 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
76, 27
               

               
Conread position:
               
199-501
               

               
Cow position:
               
chr21:33350623-33350932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
107, 293
               

               
Conread position:
               
199-502
               

               
Cow position:
               
chr21:5392662-5392341 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
100, 64
               

               
Conread position:
               
199-503
               

               
Cow position:
               
chr21:33263730-33264041 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
97, 17
               

               
Conread position:
               
199-520
               

               
Cow position:
               
chr21:9990393-9990726 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
107, 134
               

               
Conread position:
               
199-520
               

               
Cow position:
               
chr21:19258707-19259031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
76, 29
               

               
Conread position:
               
199-556
               

               
Cow position:
               
chr21:30231821-30231444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
75, 262
               

               
Conread position:
               
199-559
               

               
Cow position:
               
chr21:643214-643575 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
112, 25
               

               
Conread position:
               
199-559
               

               
Cow position:
               
chr21:4399680-4400048 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
76, 27
               

               
Conread position:
               
199-559
               

               
Cow position:
               
chr21:11645088-11644711 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
97, 47
               

               
Conread position:
               
199-559
               

               
Cow position:
               
chr21:29214268-29213904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
97, 29
               

               
Conread position:
               
199-559
               

               
Cow position:
               
chr21:41590676-41590311 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
107, 45
               

               
Conread position:
               
199-560
               

               
Cow position:
               
chr21:31691359-31691728 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 230
               

               
Conread position:
               
199-576
               

               
Cow position:
               
chr21:27229914-27229530 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
51, 25
               

               
Conread position:
               
199-577
               

               
Cow position:
               
chr21:20160564-20160951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
72, 14
               

               
Conread position:
               
199-577
               

               
Cow position:
               
chr21:30222222-30222616 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
110, 43
               

               
Conread position:
               
199-582
               

               
Cow position:
               
chr21:641463-641861 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 52
               

               
Conread position:
               
199-584
               

               
Cow position:
               
chr21:81951-82339 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 148
               

               
Conread position:
               
199-585
               

               
Cow position:
               
chr21:24858192-24858597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
97, 167
               

               
Conread position:
               
199-585
               

               
Cow position:
               
chr21:29978882-29978487 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
25, 164
               

               
Conread position:
               
199-586
               

               
Cow position:
               
chr21:18155693-18155283 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
75, 284
               

               
Conread position:
               
199-589
               

               
Cow position:
               
chr21:22718900-22718496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
80, 45
               

               
Conread position:
               
199-596
               

               
Cow position:
               
chr21:33982928-33982526 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
110, 76
               

               
Conread position:
               
200-442
               

               
Cow position:
               
chr21:24130962-24131203 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
106, 24
               

               
Conread position:
               
200-491
               

               
Cow position:
               
chr21:28190910-28191213 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
97, 207
               

               
Conread position:
               
201-409
               

               
Cow position:
               
chr21:21223172-21223383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
105, 180
               

               
Conread position:
               
201-433
               

               
Cow position:
               
chr21:17856426-17856669 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
8.00001e-42
               

               
Alignm gaps (pig, cow):
               
76, 72
               

               
Conread position:
               
201-440
               

               
Cow position:
               
chr21:43631320-43631088 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
186, 103
               

               
Conread position:
               
201-447
               

               
Cow position:
               
chr21:18842355-18842098 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
106, 84
               

               
Conread position:
               
201-492
               

               
Cow position:
               
chr21:33210081-33210372 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
8.00001e-42
               

               
Alignm gaps (pig, cow):
               
158, 112
               

               
Conread position:
               
201-501
               

               
Cow position:
               
chr21:32297628-32297326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
115, 110
               

               
Conread position:
               
201-502
               

               
Cow position:
               
chr21:36297368-36297686 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
19, 300
               

               
Conread position:
               
201-559
               

               
Cow position:
               
chr21:6713643-6713269 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
49, 23
               

               
Conread position:
               
202-572
               

               
Cow position:
               
chr21:32559475-32559102 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 52
               

               
Conread position:
               
203-575
               

               
Cow position:
               
chr21:47465237-47464850 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
95, 37
               

               
Conread position:
               
205-502
               

               
Cow position:
               
chr21:46264061-46264362 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
92, 20
               

               
Conread position:
               
206-501
               

               
Cow position:
               
chr21:35437580-35437296 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
9, 17
               

               
Conread position:
               
206-502
               

               
Cow position:
               
chr21:10007754-10007444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
68, 137
               

               
Conread position:
               
207-497
               

               
Cow position:
               
chr21:28989501-28989803 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
97, 17
               

               
Conread position:
               
211-476
               

               
Cow position:
               
chr21:30990381-30990119 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
84, 148
               

               
Conread position:
               
211-478
               

               
Cow position:
               
chr21:35354422-35354703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
96, 163
               

               
Conread position:
               
211-559
               

               
Cow position:
               
chr21:802406-802068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 131
               

               
Conread position:
               
211-559
               

               
Cow position:
               
chr21:3585471-3585109 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
91, 29
               

               
Conread position:
               
211-559
               

               
Cow position:
               
chr21:32339849-32339490 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
68, 160
               

               
Conread position:
               
212-496
               

               
Cow position:
               
chr21:27624599-27624884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
8.99634e-43
               

               
Alignm gaps (pig, cow):
               
99, 274
               

               
Conread position:
               
212-581
               

               
Cow position:
               
chr21:23535603-23535991 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
63, 134
               

               
Conread position:
               
213-442
               

               
Cow position:
               
chr21:10601483-10601241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
92, 0
               

               
Conread position:
               
216-501
               

               
Cow position:
               
chr21:2657713-2658000 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
25, 62
               

               
Conread position:
               
216-502
               

               
Cow position:
               
chr21:18800635-18800342 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
95, 135
               

               
Conread position:
               
216-577
               

               
Cow position:
               
chr21:48234265-48233902 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
92, 44
               

               
Conread position:
               
216-578
               

               
Cow position:
               
chr21:30592410-30592039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
95, 187
               

               
Conread position:
               
218-438
               

               
Cow position:
               
chr21:39664493-39664268 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
221-558
               

               
Cow position:
               
chr21:7673024-7673367 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
7, 202
               

               
Conread position:
               
223-416
               

               
Cow position:
               
chr21:2904572-2904370 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
223-569
               

               
Cow position:
               
chr21:10263937-10264301 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
98, 17
               

               
Conread position:
               
224-490
               

               
Cow position:
               
chr21:45262910-45262628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
224-559
               

               
Cow position:
               
chr21:44565805-44565474 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
94, 75
               

               
Conread position:
               
226-557
               

               
Cow position:
               
chr21:11740212-11739866 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
64, 217
               

               
Conread position:
               
226-574
               

               
Cow position:
               
chr21:22121426-22121771 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
67, 105
               

               
Conread position:
               
226-585
               

               
Cow position:
               
chr21:22860903-22861275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
82, 226
               

               
Conread position:
               
230-384
               

               
Cow position:
               
chr21:35897724-35897563 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
107, 0
               

               
Conread position:
               
230-447
               

               
Cow position:
               
chr21:44515172-44515403 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
55, 13
               

               
Conread position:
               
230-502
               

               
Cow position:
               
chr21:13365246-13365540 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
66, 186
               

               
Conread position:
               
230-559
               

               
Cow position:
               
chr21:30835270-30835621 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
40, 177
               

               
Conread position:
               
233-575
               

               
Cow position:
               
chr21:22210333-22209973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
66, 118
               

               
Conread position:
               
246-561
               

               
Cow position:
               
chr21:44214048-44214368 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
50, 180
               

               
Conread position:
               
249-586
               

               
Cow position:
               
chr21:47719372-47719019 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
57, 200
               

               
Conread position:
               
268-547
               

               
Cow position:
               
chr21:829256-828967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 186
               

               
Conread position:
               
273-586
               

               
Cow position:
               
chr21:13656678-13656351 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
35, 71
               

               
Conread position:
               
292-499
               

               
Cow position:
               
chr21:11057891-11057692 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
67, 39
               

               
Conread position:
               
299-442
               

               
Cow position:
               
chr21:297743-297888 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
299-501
               

               
Cow position:
               
chr21:4280682-4280484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
51, 112
               

               
Conread position:
               
299-501
               

               
Cow position:
               
chr21:30980587-30980387 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
60, 115
               

               
Conread position:
               
299-557
               

               
Cow position:
               
chr21:21615765-21616029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
32, 251
               

               
Conread position:
               
299-558
               

               
Cow position:
               
chr21:868934-868665 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
45, 22
               

               
Conread position:
               
299-558
               

               
Cow position:
               
chr21:18059967-18059705 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
59, 23
               

               
Conread position:
               
299-559
               

               
Cow position:
               
chr21:674675-674923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
60, 150
               

               
Conread position:
               
299-559
               

               
Cow position:
               
chr21:28030279-28030534 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
60, 112
               

               
Conread position:
               
299-565
               

               
Cow position:
               
chr21:37790009-37789741 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
60, 161
               

               
Conread position:
               
299-569
               

               
Cow position:
               
chr21:8349319-8349586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
42, 115
               

               
Conread position:
               
299-575
               

               
Cow position:
               
chr21:14126278-14126543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
66, 43
               

               
Conread position:
               
299-575
               

               
Cow position:
               
chr21:47714014-47713734 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
33, 52
               

               
Conread position:
               
299-577
               

               
Cow position:
               
chr21:19060096-19059820 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
35, 42
               

               
Conread position:
               
299-577
               

               
Cow position:
               
chr21:33580412-33580685 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
60, 32
               

               
Conread position:
               
299-586
               

               
Cow position:
               
chr21:44724374-44724093 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
64, 39
               

               
Conread position:
               
299-589
               

               
Cow position:
               
chr21:23672741-23673030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
62, 48
               

               
Conread position:
               
299-595
               

               
Cow position:
               
chr21:7768425-7768724 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
41, 272
               

               
Conread position:
               
300-495
               

               
Cow position:
               
chr21:41046796-41046991 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
40, 105
               

               
Conread position:
               
300-502
               

               
Cow position:
               
chr21:29014570-29014366 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
45, 184
               

               
Conread position:
               
300-578
               

               
Cow position:
               
chr21:22014179-22014466 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
52, 20
               

               
Conread position:
               
300-583
               

               
Cow position:
               
chr21:36696098-36695808 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
59, 45
               

               
Conread position:
               
300-586
               

               
Cow position:
               
chr21:742275-742557 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
9, 95
               

               
Conread position:
               
301-470
               

               
Cow position:
               
chr21:20183064-20183233 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
57, 47
               

               
Conread position:
               
301-574
               

               
Cow position:
               
chr21:28919531-28919260 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
59, 144
               

               
Conread position:
               
302-501
               

               
Cow position:
               
chr21:47160211-47160410 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
42, 18
               

               
Conread position:
               
305-559
               

               
Cow position:
               
chr21:7169683-7169942 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
305-563
               

               
Cow position:
               
chr21:19240880-19240619 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
31, 217
               

               
Conread position:
               
308-577
               

               
Cow position:
               
chr21:46599359-46599631 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
36, 140
               

               
Conread position:
               
308-597
               

               
Cow position:
               
chr21:71585-71880 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
8.00001e-42
               

               
Alignm gaps (pig, cow):
               
31, 140
               

               
Conread position:
               
309-494
               

               
Cow position:
               
chr21:7394284-7394102 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
178, 49
               

               
Conread position:
               
309-501
               

               
Cow position:
               
chr21:9027313-9027508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
46, 161
               

               
Conread position:
               
309-586
               

               
Cow position:
               
chr21:12354694-12354421 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
62, 110
               

               
Conread position:
               
309-589
               

               
Cow position:
               
chr21:8426447-8426730 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
213, 164
               

               
Conread position:
               
311-559
               

               
Cow position:
               
chr21:12104367-12104608 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
48, 181
               

               
Conread position:
               
318-502
               

               
Cow position:
               
chr21:19360167-19359984 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
41, 166
               

               
Conread position:
               
319-577
               

               
Cow position:
               
chr21:19868946-19868688 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
28, 166
               

               
Conread position:
               
319-585
               

               
Cow position:
               
chr21:36682332-36682608 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
12, 168
               

               
Conread position:
               
326-578
               

               
Cow position:
               
chr21:39403507-39403253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
26, 41
               

               
Conread position:
               
329-590
               

               
Cow position:
               
chr21:6851192-6851450 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
30, 145
               

               
Conread position:
               
335-583
               

               
Cow position:
               
chr21:20163734-20163987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
8, 15
               

               
Conread position:
               
336-559
               

               
Cow position:
               
chr21:22850949-22851170 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
186, 60
               

               
Conread position:
               
336-569
               

               
Cow position:
               
chr21:24875380-24875616 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
25, 12
               

               
Conread position:
               
337-559
               

               
Cow position:
               
chr21:17252950-17252722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
22, 65
               

               
Conread position:
               
340-577
               

               
Cow position:
               
chr21:46451921-46451698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
19, 35
               

               
Conread position:
               
344-586
               

               
Cow position:
               
chr21:39393783-39394030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
15, 243
               

               
Conread position:
               
349-559
               

               
Cow position:
               
chr21:16498559-16498770 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
14, 63
               

               
Conread position:
               
360-557
               

               
Cow position:
               
chr21:40820801-40820598 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
122, 106
               

               
Conread position:
               
361-578
               

               
Cow position:
               
chr21:25012135-25012352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
161, 83
               

               
Conread position:
               
361-583
               

               
Cow position:
               
chr21:11182606-11182829 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
115, 105
               

               
Conread position:
               
362-586
               

               
Cow position:
               
chr21:15012493-15012715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
160, 121
               

               
Conread position:
               
366-577
               

               
Cow position:
               
chr21:8506488-8506275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
121, 195
               

               
Conread position:
               
366-577
               

               
Cow position:
               
chr21:8509376-8509163 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
121, 195
               

               
Conread position:
               
377-559
               

               
Cow position:
               
chr21:13883550-13883732 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
73, 109
               

               
Conread position:
               
402-577
               

               
Cow position:
               
chr21:44732949-44732770 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
90, 10
               

               
Conread position:
               
407-577
               

               
Cow position:
               
chr21:18056030-18055856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
71, 0
               
Show alignments to all cow chromosomes.