Cow genome map
| Conread name: | unkn-SofBand_140 |
| Conread position: | 168-303 |
| Cow position: | chr28:8372264-8372397 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 105 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 168-385 |
| Cow position: | chr28:24646334-24646557 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 171 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 130, 13 |
| Conread position: | 168-386 |
| Cow position: | chr28:3751112-3751333 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 173 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 100, 12 |
| Conread position: | 168-495 |
| Cow position: | chr28:29199520-29199856 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 240 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 138, 11 |
| Conread position: | 168-558 |
| Cow position: | chr28:26340130-26340529 (view UCSC Genome Browser custom track) |
| Alignm length: | 405 |
| Alignm identity: | 253 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 106, 11 |
| Conread position: | 168-577 |
| Cow position: | chr28:5203993-5204399 (view UCSC Genome Browser custom track) |
| Alignm length: | 421 |
| Alignm identity: | 288 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 91, 11 |
| Conread position: | 168-578 |
| Cow position: | chr28:1099848-1099461 (view UCSC Genome Browser custom track) |
| Alignm length: | 416 |
| Alignm identity: | 280 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 104, 11 |
| Conread position: | 168-584 |
| Cow position: | chr28:16919368-16918953 (view UCSC Genome Browser custom track) |
| Alignm length: | 427 |
| Alignm identity: | 306 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 129, 7 |
| Conread position: | 168-584 |
| Cow position: | chr28:20124579-20125004 (view UCSC Genome Browser custom track) |
| Alignm length: | 438 |
| Alignm identity: | 303 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 140, 13 |
| Conread position: | 169-584 |
| Cow position: | chr28:9636659-9636235 (view UCSC Genome Browser custom track) |
| Alignm length: | 435 |
| Alignm identity: | 312 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 120, 21 |
| Conread position: | 173-477 |
| Cow position: | chr28:5128931-5128618 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 237 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 122, 7 |
| Conread position: | 174-537 |
| Cow position: | chr28:22345817-22346199 (view UCSC Genome Browser custom track) |
| Alignm length: | 387 |
| Alignm identity: | 268 |
| Alignm E-value: | 8.40779e-45 |
| Alignm gaps (pig, cow): | 137, 25 |
| Conread position: | 175-555 |
| Cow position: | chr28:4090245-4089867 (view UCSC Genome Browser custom track) |
| Alignm length: | 391 |
| Alignm identity: | 259 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 132, 22 |
| Conread position: | 179-309 |
| Cow position: | chr28:20760120-20759991 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 102 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 179-501 |
| Cow position: | chr28:6971546-6971210 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 238 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 179-559 |
| Cow position: | chr28:5236799-5236399 (view UCSC Genome Browser custom track) |
| Alignm length: | 403 |
| Alignm identity: | 259 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 100, 18 |
| Conread position: | 181-586 |
| Cow position: | chr28:10844924-10845328 (view UCSC Genome Browser custom track) |
| Alignm length: | 420 |
| Alignm identity: | 272 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 92, 16 |
| Conread position: | 186-501 |
| Cow position: | chr28:2961024-2960697 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 237 |
| Alignm E-value: | 4.99997e-41 |
| Alignm gaps (pig, cow): | 9, 43 |
| Conread position: | 186-577 |
| Cow position: | chr28:4884456-4884038 (view UCSC Genome Browser custom track) |
| Alignm length: | 420 |
| Alignm identity: | 297 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 123, 13 |
| Conread position: | 186-577 |
| Cow position: | chr28:9426541-9426140 (view UCSC Genome Browser custom track) |
| Alignm length: | 412 |
| Alignm identity: | 271 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 83, 38 |
| Conread position: | 196-577 |
| Cow position: | chr28:11829123-11828744 (view UCSC Genome Browser custom track) |
| Alignm length: | 397 |
| Alignm identity: | 287 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 143 |
| Conread position: | 196-595 |
| Cow position: | chr28:15272441-15272041 (view UCSC Genome Browser custom track) |
| Alignm length: | 414 |
| Alignm identity: | 263 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 78, 28 |
| Conread position: | 197-586 |
| Cow position: | chr28:4158777-4159183 (view UCSC Genome Browser custom track) |
| Alignm length: | 414 |
| Alignm identity: | 290 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 111, 5 |
| Conread position: | 199-305 |
| Cow position: | chr28:118233-118127 (view UCSC Genome Browser custom track) |
| Alignm length: | 108 |
| Alignm identity: | 89 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 80, 56 |
| Conread position: | 199-306 |
| Cow position: | chr28:8348830-8348724 (view UCSC Genome Browser custom track) |
| Alignm length: | 108 |
| Alignm identity: | 90 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 199-383 |
| Cow position: | chr28:5366308-5366131 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 141 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 159, 32 |
| Conread position: | 199-427 |
| Cow position: | chr28:3256616-3256858 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 178 |
| Alignm E-value: | 8e-35 |
| Alignm gaps (pig, cow): | 112, 0 |
| Conread position: | 199-429 |
| Cow position: | chr28:7751478-7751239 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 181 |
| Alignm E-value: | 4.99997e-41 |
| Alignm gaps (pig, cow): | 98, 218 |
| Conread position: | 199-435 |
| Cow position: | chr28:7549240-7548989 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 192 |
| Alignm E-value: | 6.00036e-42 |
| Alignm gaps (pig, cow): | 95, 75 |
| Conread position: | 199-476 |
| Cow position: | chr28:2862684-2862977 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 221 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 108, 140 |
| Conread position: | 199-478 |
| Cow position: | chr28:8022289-8021992 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 213 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 98, 34 |
| Conread position: | 199-479 |
| Cow position: | chr28:18591092-18591382 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 209 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 87, 224 |
| Conread position: | 199-479 |
| Cow position: | chr28:26614709-26614985 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 192 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 102, 23 |
| Conread position: | 199-487 |
| Cow position: | chr28:7865145-7865449 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 215 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 100, 17 |
| Conread position: | 199-498 |
| Cow position: | chr28:11752322-11752008 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 236 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 108, 0 |
| Conread position: | 199-500 |
| Cow position: | chr28:10172591-10172286 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 220 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 97, 168 |
| Conread position: | 199-501 |
| Cow position: | chr28:2132100-2131792 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 238 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 99, 55 |
| Conread position: | 199-501 |
| Cow position: | chr28:29434602-29434296 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 205 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 112, 26 |
| Conread position: | 199-502 |
| Cow position: | chr28:28163914-28164218 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 225 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 97, 49 |
| Conread position: | 199-520 |
| Cow position: | chr28:3408395-3408066 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 213 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 85, 121 |
| Conread position: | 199-549 |
| Cow position: | chr28:657625-657279 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 239 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 109, 19 |
| Conread position: | 199-551 |
| Cow position: | chr28:12430432-12430795 (view UCSC Genome Browser custom track) |
| Alignm length: | 375 |
| Alignm identity: | 262 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 112, 27 |
| Conread position: | 199-553 |
| Cow position: | chr28:13290312-13289967 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 247 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 112, 17 |
| Conread position: | 199-555 |
| Cow position: | chr28:3914532-3914897 (view UCSC Genome Browser custom track) |
| Alignm length: | 379 |
| Alignm identity: | 270 |
| Alignm E-value: | 8.40779e-45 |
| Alignm gaps (pig, cow): | 51, 17 |
| Conread position: | 199-556 |
| Cow position: | chr28:3746024-3746390 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 258 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 112, 255 |
| Conread position: | 199-556 |
| Cow position: | chr28:9684498-9684144 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 259 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 114, 88 |
| Conread position: | 199-557 |
| Cow position: | chr28:11426723-11426354 (view UCSC Genome Browser custom track) |
| Alignm length: | 374 |
| Alignm identity: | 267 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 110, 288 |
| Conread position: | 199-557 |
| Cow position: | chr28:14997884-14998258 (view UCSC Genome Browser custom track) |
| Alignm length: | 378 |
| Alignm identity: | 265 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 98, 59 |
| Conread position: | 199-557 |
| Cow position: | chr28:16370252-16369895 (view UCSC Genome Browser custom track) |
| Alignm length: | 372 |
| Alignm identity: | 266 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 112, 27 |
| Conread position: | 199-557 |
| Cow position: | chr28:29416894-29416531 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 261 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 93, 134 |
| Conread position: | 199-559 |
| Cow position: | chr28:3024089-3023720 (view UCSC Genome Browser custom track) |
| Alignm length: | 375 |
| Alignm identity: | 260 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 99, 25 |
| Conread position: | 199-559 |
| Cow position: | chr28:5437269-5436890 (view UCSC Genome Browser custom track) |
| Alignm length: | 382 |
| Alignm identity: | 268 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 95, 270 |
| Conread position: | 199-559 |
| Cow position: | chr28:6091182-6091552 (view UCSC Genome Browser custom track) |
| Alignm length: | 378 |
| Alignm identity: | 252 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 106, 147 |
| Conread position: | 199-559 |
| Cow position: | chr28:9285555-9285181 (view UCSC Genome Browser custom track) |
| Alignm length: | 382 |
| Alignm identity: | 273 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 100, 224 |
| Conread position: | 199-559 |
| Cow position: | chr28:11884700-11884335 (view UCSC Genome Browser custom track) |
| Alignm length: | 376 |
| Alignm identity: | 272 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 102, 7 |
| Conread position: | 199-559 |
| Cow position: | chr28:30937844-30937487 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 271 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 112, 202 |
| Conread position: | 199-561 |
| Cow position: | chr28:8787369-8787737 (view UCSC Genome Browser custom track) |
| Alignm length: | 382 |
| Alignm identity: | 283 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 108, 17 |
| Conread position: | 199-576 |
| Cow position: | chr28:23724633-23724257 (view UCSC Genome Browser custom track) |
| Alignm length: | 389 |
| Alignm identity: | 245 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 112, 33 |
| Conread position: | 199-577 |
| Cow position: | chr28:11585385-11584995 (view UCSC Genome Browser custom track) |
| Alignm length: | 397 |
| Alignm identity: | 283 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 95, 26 |
| Conread position: | 199-578 |
| Cow position: | chr28:4809616-4809986 (view UCSC Genome Browser custom track) |
| Alignm length: | 390 |
| Alignm identity: | 271 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 99, 90 |
| Conread position: | 199-580 |
| Cow position: | chr28:5684532-5684919 (view UCSC Genome Browser custom track) |
| Alignm length: | 395 |
| Alignm identity: | 286 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 100, 47 |
| Conread position: | 199-581 |
| Cow position: | chr28:11866847-11866452 (view UCSC Genome Browser custom track) |
| Alignm length: | 398 |
| Alignm identity: | 263 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 51, 379 |
| Conread position: | 199-583 |
| Cow position: | chr28:4881422-4881028 (view UCSC Genome Browser custom track) |
| Alignm length: | 405 |
| Alignm identity: | 262 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 70, 25 |
| Conread position: | 199-585 |
| Cow position: | chr28:9740293-9740680 (view UCSC Genome Browser custom track) |
| Alignm length: | 396 |
| Alignm identity: | 260 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 69, 44 |
| Conread position: | 199-586 |
| Cow position: | chr28:31841517-31841121 (view UCSC Genome Browser custom track) |
| Alignm length: | 401 |
| Alignm identity: | 280 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 147 |
| Conread position: | 199-595 |
| Cow position: | chr28:19054839-19055248 (view UCSC Genome Browser custom track) |
| Alignm length: | 420 |
| Alignm identity: | 272 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 75, 39 |
| Conread position: | 200-559 |
| Cow position: | chr28:4835022-4834647 (view UCSC Genome Browser custom track) |
| Alignm length: | 377 |
| Alignm identity: | 272 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 107, 255 |
| Conread position: | 200-559 |
| Cow position: | chr28:21868275-21868653 (view UCSC Genome Browser custom track) |
| Alignm length: | 379 |
| Alignm identity: | 273 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 96, 0 |
| Conread position: | 201-433 |
| Cow position: | chr28:4587920-4588163 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 183 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 106, 224 |
| Conread position: | 201-441 |
| Cow position: | chr28:13267606-13267863 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 186 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 72, 227 |
| Conread position: | 201-559 |
| Cow position: | chr28:13474130-13474495 (view UCSC Genome Browser custom track) |
| Alignm length: | 377 |
| Alignm identity: | 267 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 106, 16 |
| Conread position: | 201-584 |
| Cow position: | chr28:16204508-16204107 (view UCSC Genome Browser custom track) |
| Alignm length: | 408 |
| Alignm identity: | 282 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 97, 150 |
| Conread position: | 201-585 |
| Cow position: | chr28:21844780-21845172 (view UCSC Genome Browser custom track) |
| Alignm length: | 401 |
| Alignm identity: | 300 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 88, 181 |
| Conread position: | 202-501 |
| Cow position: | chr28:14649169-14649475 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 227 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 16, 179 |
| Conread position: | 202-559 |
| Cow position: | chr28:3492963-3492591 (view UCSC Genome Browser custom track) |
| Alignm length: | 375 |
| Alignm identity: | 262 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 93, 160 |
| Conread position: | 205-559 |
| Cow position: | chr28:26719185-26719526 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 243 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 102, 19 |
| Conread position: | 205-569 |
| Cow position: | chr28:7268111-7267743 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 251 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 105, 146 |
| Conread position: | 205-582 |
| Cow position: | chr28:33884236-33884626 (view UCSC Genome Browser custom track) |
| Alignm length: | 399 |
| Alignm identity: | 283 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 101, 36 |
| Conread position: | 208-577 |
| Cow position: | chr28:22371849-22371460 (view UCSC Genome Browser custom track) |
| Alignm length: | 395 |
| Alignm identity: | 280 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 103, 296 |
| Conread position: | 211-415 |
| Cow position: | chr28:5904566-5904780 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 164 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 95, 35 |
| Conread position: | 211-577 |
| Cow position: | chr28:4070799-4071172 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 283 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 139 |
| Conread position: | 212-577 |
| Cow position: | chr28:4643931-4643556 (view UCSC Genome Browser custom track) |
| Alignm length: | 378 |
| Alignm identity: | 246 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 95, 63 |
| Conread position: | 215-480 |
| Cow position: | chr28:32365680-32365956 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 184 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 26, 142 |
| Conread position: | 215-539 |
| Cow position: | chr28:34133698-34134034 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 229 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 74, 13 |
| Conread position: | 216-449 |
| Cow position: | chr28:4098678-4098911 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 157 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 140, 231 |
| Conread position: | 216-559 |
| Cow position: | chr28:4016374-4016719 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 261 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 81, 132 |
| Conread position: | 216-559 |
| Cow position: | chr28:25056808-25057152 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 262 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 91, 28 |
| Conread position: | 216-575 |
| Cow position: | chr28:11527421-11527045 (view UCSC Genome Browser custom track) |
| Alignm length: | 380 |
| Alignm identity: | 259 |
| Alignm E-value: | 5e-40 |
| Alignm gaps (pig, cow): | 95, 12 |
| Conread position: | 216-578 |
| Cow position: | chr28:10977702-10978052 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 259 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 123, 46 |
| Conread position: | 216-595 |
| Cow position: | chr28:24966228-24966619 (view UCSC Genome Browser custom track) |
| Alignm length: | 394 |
| Alignm identity: | 274 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 82, 25 |
| Conread position: | 217-501 |
| Cow position: | chr28:26220097-26220392 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 212 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 78, 21 |
| Conread position: | 218-519 |
| Cow position: | chr28:25596470-25596778 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 222 |
| Alignm E-value: | 4.99997e-41 |
| Alignm gaps (pig, cow): | 79, 204 |
| Conread position: | 220-496 |
| Cow position: | chr28:4440143-4440423 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 183 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 54, 135 |
| Conread position: | 222-461 |
| Cow position: | chr28:2872760-2873013 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 182 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 85, 6 |
| Conread position: | 222-479 |
| Cow position: | chr28:34561192-34561455 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 187 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 72, 107 |
| Conread position: | 223-531 |
| Cow position: | chr28:7927043-7927337 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 207 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 104, 45 |
| Conread position: | 224-555 |
| Cow position: | chr28:16346683-16346346 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 245 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 83, 56 |
| Conread position: | 224-585 |
| Cow position: | chr28:8347574-8347960 (view UCSC Genome Browser custom track) |
| Alignm length: | 390 |
| Alignm identity: | 263 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 55, 128 |
| Conread position: | 226-471 |
| Cow position: | chr28:24017843-24018088 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 181 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 66, 105 |
| Conread position: | 226-501 |
| Cow position: | chr28:12964416-12964701 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 199 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 70, 34 |
| Conread position: | 226-589 |
| Cow position: | chr28:24082116-24082494 (view UCSC Genome Browser custom track) |
| Alignm length: | 384 |
| Alignm identity: | 275 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 20 |
| Conread position: | 235-586 |
| Cow position: | chr28:10863927-10863574 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 246 |
| Alignm E-value: | 9e-36 |
| Alignm gaps (pig, cow): | 58, 162 |
| Conread position: | 240-585 |
| Cow position: | chr28:9812143-9812504 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 234 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 37, 33 |
| Conread position: | 246-586 |
| Cow position: | chr28:22332401-22332752 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 243 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 67, 102 |
| Conread position: | 249-559 |
| Cow position: | chr28:8140351-8140680 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 230 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 58, 101 |
| Conread position: | 259-578 |
| Cow position: | chr28:11079185-11079515 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 239 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 52, 102 |
| Conread position: | 277-559 |
| Cow position: | chr28:4181913-4182197 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 212 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 12, 64 |
| Conread position: | 278-491 |
| Cow position: | chr28:16246165-16245943 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 171 |
| Alignm E-value: | 9e-36 |
| Alignm gaps (pig, cow): | 30, 145 |
| Conread position: | 290-494 |
| Cow position: | chr28:4179478-4179677 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 143 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 68, 9 |
| Conread position: | 297-559 |
| Cow position: | chr28:777602-777872 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 191 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 16, 10 |
| Conread position: | 299-491 |
| Cow position: | chr28:11348362-11348544 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 140 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 60, 16 |
| Conread position: | 299-547 |
| Cow position: | chr28:3740813-3741053 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 177 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 223, 49 |
| Conread position: | 299-558 |
| Cow position: | chr28:7009044-7008786 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 166 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 223, 40 |
| Conread position: | 299-559 |
| Cow position: | chr28:22813193-22813444 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 186 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 48, 22 |
| Conread position: | 299-576 |
| Cow position: | chr28:10589091-10588819 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 206 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 48, 161 |
| Conread position: | 299-581 |
| Cow position: | chr28:3449234-3449525 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 197 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 37, 49 |
| Conread position: | 299-585 |
| Cow position: | chr28:5139064-5138772 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 215 |
| Alignm E-value: | 6.00036e-42 |
| Alignm gaps (pig, cow): | 40, 150 |
| Conread position: | 300-559 |
| Cow position: | chr28:4013020-4013279 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 199 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 45 |
| Conread position: | 300-584 |
| Cow position: | chr28:19564298-19564019 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 201 |
| Alignm E-value: | 7e-34 |
| Alignm gaps (pig, cow): | 47, 176 |
| Conread position: | 301-501 |
| Cow position: | chr28:27161393-27161195 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 142 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 49, 38 |
| Conread position: | 301-586 |
| Cow position: | chr28:25128818-25129104 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 205 |
| Alignm E-value: | 5e-40 |
| Alignm gaps (pig, cow): | 46, 113 |
| Conread position: | 302-559 |
| Cow position: | chr28:7350593-7350846 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 192 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 185, 41 |
| Conread position: | 305-559 |
| Cow position: | chr28:7619214-7618964 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 182 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 34, 180 |
| Conread position: | 305-568 |
| Cow position: | chr28:26531343-26531077 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 196 |
| Alignm E-value: | 9e-36 |
| Alignm gaps (pig, cow): | 30, 162 |
| Conread position: | 308-499 |
| Cow position: | chr28:12070176-12070363 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 147 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 34, 67 |
| Conread position: | 308-553 |
| Cow position: | chr28:3445541-3445290 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 191 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 31, 116 |
| Conread position: | 308-579 |
| Cow position: | chr28:4006737-4006998 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 188 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 197, 32 |
| Conread position: | 310-581 |
| Cow position: | chr28:17739767-17740044 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 195 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 11, 38 |
| Conread position: | 312-496 |
| Cow position: | chr28:4438655-4438838 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 135 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 47, 173 |
| Conread position: | 312-586 |
| Cow position: | chr28:7557777-7557503 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 198 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 184, 32 |
| Conread position: | 315-479 |
| Cow position: | chr28:2762142-2762307 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 129 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 44, 132 |
| Conread position: | 327-499 |
| Cow position: | chr28:7498189-7498017 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 128 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 24, 121 |
| Conread position: | 327-557 |
| Cow position: | chr28:2279630-2279408 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 158 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 20, 71 |
| Conread position: | 329-556 |
| Cow position: | chr28:4045811-4046037 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 161 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 31, 18 |
| Conread position: | 334-504 |
| Cow position: | chr28:11816702-11816531 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 126 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 9, 152 |
| Conread position: | 335-584 |
| Cow position: | chr28:9705621-9705874 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 185 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 24, 10 |
| Conread position: | 336-581 |
| Cow position: | chr28:24646561-24646802 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 169 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 26, 59 |
| Conread position: | 336-598 |
| Cow position: | chr28:5254843-5255108 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 195 |
| Alignm E-value: | 8.40779e-45 |
| Alignm gaps (pig, cow): | 23, 13 |
| Conread position: | 337-553 |
| Cow position: | chr28:12991105-12991325 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 161 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 22, 114 |
| Conread position: | 340-579 |
| Cow position: | chr28:6975213-6975449 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 170 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 19, 144 |
| Conread position: | 342-502 |
| Cow position: | chr28:22148039-22147881 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 118 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 95, 12 |
| Conread position: | 342-580 |
| Cow position: | chr28:7132112-7131873 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 169 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 180, 79 |
| Conread position: | 344-559 |
| Cow position: | chr28:8304223-8304438 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 162 |
| Alignm E-value: | 9e-36 |
| Alignm gaps (pig, cow): | 15, 65 |
| Conread position: | 348-580 |
| Cow position: | chr28:29850835-29850604 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 169 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 11, 136 |
| Conread position: | 349-555 |
| Cow position: | chr28:32358089-32358296 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 139 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 11, 37 |
| Conread position: | 349-559 |
| Cow position: | chr28:11016389-11016600 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 152 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 14, 27 |
| Conread position: | 349-586 |
| Cow position: | chr28:4101501-4101735 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 164 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 10, 160 |
| Conread position: | 354-581 |
| Cow position: | chr28:8396322-8396543 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 167 |
| Alignm E-value: | 8e-35 |
| Alignm gaps (pig, cow): | 207, 129 |
| Conread position: | 358-582 |
| Cow position: | chr28:5805662-5805881 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 168 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 129, 49 |
| Conread position: | 359-552 |
| Cow position: | chr28:4364830-4364637 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 144 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 133, 51 |
| Conread position: | 361-555 |
| Cow position: | chr28:16879567-16879760 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 150 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 161, 122 |
| Conread position: | 363-557 |
| Cow position: | chr28:30902122-30902315 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 144 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 159, 121 |
| Conread position: | 367-586 |
| Cow position: | chr28:4876443-4876660 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 154 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 155, 48 |
| Conread position: | 374-569 |
| Cow position: | chr28:10890728-10890537 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 145 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 148, 109 |
| Conread position: | 375-575 |
| Cow position: | chr28:9109224-9109422 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 146 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 147, 91 |
| Conread position: | 382-587 |
| Cow position: | chr28:8936164-8936369 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 143 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 9, 179 |
| Conread position: | 383-589 |
| Cow position: | chr28:17943746-17943949 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 141 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 139, 151 |
| Conread position: | 396-586 |
| Cow position: | chr28:3678391-3678583 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 139 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 126, 0 |
| Conread position: | 398-584 |
| Cow position: | chr28:26868120-26867931 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 137 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 56, 46 |
| Conread position: | 402-595 |
| Cow position: | chr28:11305598-11305400 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 136 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 85, 0 |
| Conread position: | 404-580 |
| Cow position: | chr28:10762931-10763107 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 128 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 118, 79 |
| Conread position: | 412-559 |
| Cow position: | chr28:4866528-4866382 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 109 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 110, 71 |
Show alignments to all cow chromosomes.