Cow genome map
| Conread name: | unkn-SofBand_140 |
| Conread position: | 112-447 |
| Cow position: | chr29:465671-465326 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 223 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 29, 5 |
| Conread position: | 168-442 |
| Cow position: | chr29:26263638-26263904 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 184 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 130, 12 |
| Conread position: | 168-482 |
| Cow position: | chr29:28446473-28446148 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 229 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 142, 13 |
| Conread position: | 168-486 |
| Cow position: | chr29:26615938-26615605 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 236 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 128, 11 |
| Conread position: | 168-489 |
| Cow position: | chr29:20903501-20903177 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 232 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 138, 13 |
| Conread position: | 168-501 |
| Cow position: | chr29:26673119-26672790 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 223 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 134, 13 |
| Conread position: | 168-502 |
| Cow position: | chr29:4480389-4480047 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 254 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 143, 11 |
| Conread position: | 168-559 |
| Cow position: | chr29:19762059-19762453 (view UCSC Genome Browser custom track) |
| Alignm length: | 405 |
| Alignm identity: | 297 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 126, 13 |
| Conread position: | 168-559 |
| Cow position: | chr29:36530650-36531056 (view UCSC Genome Browser custom track) |
| Alignm length: | 411 |
| Alignm identity: | 298 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 128, 11 |
| Conread position: | 171-528 |
| Cow position: | chr29:11646894-11647248 (view UCSC Genome Browser custom track) |
| Alignm length: | 372 |
| Alignm identity: | 246 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 134, 24 |
| Conread position: | 174-481 |
| Cow position: | chr29:1229400-1229714 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 205 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 100, 25 |
| Conread position: | 179-438 |
| Cow position: | chr29:19659839-19660110 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 185 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 96, 15 |
| Conread position: | 179-577 |
| Cow position: | chr29:2623683-2623271 (view UCSC Genome Browser custom track) |
| Alignm length: | 418 |
| Alignm identity: | 270 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 116, 16 |
| Conread position: | 181-438 |
| Cow position: | chr29:10627829-10627559 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 181 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 89, 13 |
| Conread position: | 181-480 |
| Cow position: | chr29:43009286-43008978 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 223 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 114, 19 |
| Conread position: | 181-577 |
| Cow position: | chr29:20674006-20673602 (view UCSC Genome Browser custom track) |
| Alignm length: | 411 |
| Alignm identity: | 261 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 93, 15 |
| Conread position: | 181-592 |
| Cow position: | chr29:31786477-31786893 (view UCSC Genome Browser custom track) |
| Alignm length: | 432 |
| Alignm identity: | 277 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 88, 16 |
| Conread position: | 186-501 |
| Cow position: | chr29:36209968-36210264 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 226 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 174, 11 |
| Conread position: | 196-310 |
| Cow position: | chr29:477915-478030 (view UCSC Genome Browser custom track) |
| Alignm length: | 116 |
| Alignm identity: | 91 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 99, 0 |
| Conread position: | 196-490 |
| Cow position: | chr29:463841-463536 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 210 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 78, 30 |
| Conread position: | 197-593 |
| Cow position: | chr29:26275427-26275828 (view UCSC Genome Browser custom track) |
| Alignm length: | 408 |
| Alignm identity: | 278 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 99, 80 |
| Conread position: | 199-317 |
| Cow position: | chr29:4334543-4334659 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 98 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 80, 12 |
| Conread position: | 199-439 |
| Cow position: | chr29:9718957-9718707 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 188 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 96, 206 |
| Conread position: | 199-439 |
| Cow position: | chr29:24103733-24103476 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 194 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 97, 134 |
| Conread position: | 199-451 |
| Cow position: | chr29:40166058-40166322 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 192 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 51, 7 |
| Conread position: | 199-459 |
| Cow position: | chr29:11562430-11562698 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 194 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 109, 47 |
| Conread position: | 199-475 |
| Cow position: | chr29:5098946-5098665 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 192 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 112, 42 |
| Conread position: | 199-476 |
| Cow position: | chr29:24578695-24578965 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 205 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 148, 41 |
| Conread position: | 199-477 |
| Cow position: | chr29:17607232-17607519 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 206 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 99, 265 |
| Conread position: | 199-499 |
| Cow position: | chr29:36216933-36217235 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 222 |
| Alignm E-value: | 6e-40 |
| Alignm gaps (pig, cow): | 112, 37 |
| Conread position: | 199-501 |
| Cow position: | chr29:40299197-40298895 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 202 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 74, 42 |
| Conread position: | 199-501 |
| Cow position: | chr29:40852748-40853055 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 199 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 97, 144 |
| Conread position: | 199-502 |
| Cow position: | chr29:28166402-28166096 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 214 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 20, 115 |
| Conread position: | 199-502 |
| Cow position: | chr29:29974856-29975167 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 215 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 119, 81 |
| Conread position: | 199-518 |
| Cow position: | chr29:7966061-7966393 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 224 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 69, 39 |
| Conread position: | 199-536 |
| Cow position: | chr29:1556748-1557094 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 245 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 95, 16 |
| Conread position: | 199-539 |
| Cow position: | chr29:3100446-3100095 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 238 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 80, 154 |
| Conread position: | 199-556 |
| Cow position: | chr29:25737600-25737232 (view UCSC Genome Browser custom track) |
| Alignm length: | 379 |
| Alignm identity: | 279 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 97, 29 |
| Conread position: | 199-557 |
| Cow position: | chr29:14501406-14501783 (view UCSC Genome Browser custom track) |
| Alignm length: | 380 |
| Alignm identity: | 251 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 69, 154 |
| Conread position: | 199-559 |
| Cow position: | chr29:17109787-17110143 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 259 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 112, 25 |
| Conread position: | 199-559 |
| Cow position: | chr29:28197192-28196830 (view UCSC Genome Browser custom track) |
| Alignm length: | 377 |
| Alignm identity: | 261 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 60, 37 |
| Conread position: | 199-562 |
| Cow position: | chr29:16657500-16657884 (view UCSC Genome Browser custom track) |
| Alignm length: | 389 |
| Alignm identity: | 258 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 68, 263 |
| Conread position: | 199-571 |
| Cow position: | chr29:40117384-40117768 (view UCSC Genome Browser custom track) |
| Alignm length: | 393 |
| Alignm identity: | 280 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 90, 53 |
| Conread position: | 199-575 |
| Cow position: | chr29:23155066-23155442 (view UCSC Genome Browser custom track) |
| Alignm length: | 393 |
| Alignm identity: | 281 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 160, 97 |
| Conread position: | 199-577 |
| Cow position: | chr29:41113045-41112681 (view UCSC Genome Browser custom track) |
| Alignm length: | 382 |
| Alignm identity: | 277 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 160, 25 |
| Conread position: | 199-585 |
| Cow position: | chr29:31928797-31929205 (view UCSC Genome Browser custom track) |
| Alignm length: | 417 |
| Alignm identity: | 287 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 70, 25 |
| Conread position: | 199-586 |
| Cow position: | chr29:4520151-4520545 (view UCSC Genome Browser custom track) |
| Alignm length: | 407 |
| Alignm identity: | 269 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 98, 25 |
| Conread position: | 199-586 |
| Cow position: | chr29:12679970-12680375 (view UCSC Genome Browser custom track) |
| Alignm length: | 409 |
| Alignm identity: | 279 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 98, 172 |
| Conread position: | 199-586 |
| Cow position: | chr29:19949125-19949525 (view UCSC Genome Browser custom track) |
| Alignm length: | 404 |
| Alignm identity: | 281 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 222 |
| Conread position: | 199-586 |
| Cow position: | chr29:22162435-22162051 (view UCSC Genome Browser custom track) |
| Alignm length: | 406 |
| Alignm identity: | 288 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 100, 29 |
| Conread position: | 199-594 |
| Cow position: | chr29:44988966-44988578 (view UCSC Genome Browser custom track) |
| Alignm length: | 404 |
| Alignm identity: | 266 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 111, 45 |
| Conread position: | 200-501 |
| Cow position: | chr29:8926642-8926336 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 226 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 105 |
| Conread position: | 200-501 |
| Cow position: | chr29:18085407-18085699 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 217 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 18, 42 |
| Conread position: | 200-595 |
| Cow position: | chr29:1933740-1933341 (view UCSC Genome Browser custom track) |
| Alignm length: | 411 |
| Alignm identity: | 269 |
| Alignm E-value: | 9e-33 |
| Alignm gaps (pig, cow): | 75, 24 |
| Conread position: | 201-377 |
| Cow position: | chr29:21000457-21000636 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 131 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 110, 132 |
| Conread position: | 201-498 |
| Cow position: | chr29:39329780-39329479 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 197 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 112, 0 |
| Conread position: | 201-559 |
| Cow position: | chr29:5892664-5893036 (view UCSC Genome Browser custom track) |
| Alignm length: | 378 |
| Alignm identity: | 269 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 112, 53 |
| Conread position: | 201-559 |
| Cow position: | chr29:35501831-35501475 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 254 |
| Alignm E-value: | 6e-40 |
| Alignm gaps (pig, cow): | 111, 27 |
| Conread position: | 201-596 |
| Cow position: | chr29:4625178-4624769 (view UCSC Genome Browser custom track) |
| Alignm length: | 419 |
| Alignm identity: | 266 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 71, 25 |
| Conread position: | 202-491 |
| Cow position: | chr29:5186680-5186376 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 222 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 0 |
| Conread position: | 202-560 |
| Cow position: | chr29:732436-732801 (view UCSC Genome Browser custom track) |
| Alignm length: | 376 |
| Alignm identity: | 265 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 105, 59 |
| Conread position: | 202-574 |
| Cow position: | chr29:9310443-9310806 (view UCSC Genome Browser custom track) |
| Alignm length: | 383 |
| Alignm identity: | 251 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 111, 61 |
| Conread position: | 205-494 |
| Cow position: | chr29:32211238-32210953 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 218 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 106, 196 |
| Conread position: | 205-558 |
| Cow position: | chr29:37618127-37618497 (view UCSC Genome Browser custom track) |
| Alignm length: | 376 |
| Alignm identity: | 244 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 106, 23 |
| Conread position: | 205-559 |
| Cow position: | chr29:4875075-4874700 (view UCSC Genome Browser custom track) |
| Alignm length: | 384 |
| Alignm identity: | 274 |
| Alignm E-value: | 8.96831e-44 |
| Alignm gaps (pig, cow): | 83, 266 |
| Conread position: | 205-559 |
| Cow position: | chr29:43099924-43099559 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 253 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 90, 39 |
| Conread position: | 205-559 |
| Cow position: | chr29:43328460-43328822 (view UCSC Genome Browser custom track) |
| Alignm length: | 372 |
| Alignm identity: | 247 |
| Alignm E-value: | 9e-33 |
| Alignm gaps (pig, cow): | 102, 25 |
| Conread position: | 205-575 |
| Cow position: | chr29:25091930-25092308 (view UCSC Genome Browser custom track) |
| Alignm length: | 389 |
| Alignm identity: | 273 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 106, 184 |
| Conread position: | 206-501 |
| Cow position: | chr29:23244061-23243751 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 219 |
| Alignm E-value: | 6e-40 |
| Alignm gaps (pig, cow): | 90, 176 |
| Conread position: | 206-502 |
| Cow position: | chr29:27588743-27589049 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 215 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 9, 26 |
| Conread position: | 207-554 |
| Cow position: | chr29:9709518-9709878 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 259 |
| Alignm E-value: | 8.96831e-44 |
| Alignm gaps (pig, cow): | 89, 23 |
| Conread position: | 207-586 |
| Cow position: | chr29:29589090-29588710 (view UCSC Genome Browser custom track) |
| Alignm length: | 391 |
| Alignm identity: | 244 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 67, 85 |
| Conread position: | 211-456 |
| Cow position: | chr29:44682273-44682022 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 185 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 77, 145 |
| Conread position: | 211-481 |
| Cow position: | chr29:45005799-45005522 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 210 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 86, 43 |
| Conread position: | 212-499 |
| Cow position: | chr29:41811756-41811464 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 209 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 86, 13 |
| Conread position: | 216-476 |
| Cow position: | chr29:27826354-27826622 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 191 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 10, 135 |
| Conread position: | 216-529 |
| Cow position: | chr29:28587286-28587604 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 208 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 52, 257 |
| Conread position: | 216-559 |
| Cow position: | chr29:10838779-10839129 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 234 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 92, 192 |
| Conread position: | 216-581 |
| Cow position: | chr29:22613255-22613634 (view UCSC Genome Browser custom track) |
| Alignm length: | 385 |
| Alignm identity: | 268 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 91, 247 |
| Conread position: | 216-581 |
| Cow position: | chr29:23874288-23874672 (view UCSC Genome Browser custom track) |
| Alignm length: | 389 |
| Alignm identity: | 253 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 45, 241 |
| Conread position: | 216-581 |
| Cow position: | chr29:41530678-41531061 (view UCSC Genome Browser custom track) |
| Alignm length: | 388 |
| Alignm identity: | 256 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 38, 137 |
| Conread position: | 216-586 |
| Cow position: | chr29:29769522-29769135 (view UCSC Genome Browser custom track) |
| Alignm length: | 391 |
| Alignm identity: | 267 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 91, 141 |
| Conread position: | 217-585 |
| Cow position: | chr29:34773904-34773532 (view UCSC Genome Browser custom track) |
| Alignm length: | 382 |
| Alignm identity: | 266 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 96, 275 |
| Conread position: | 218-560 |
| Cow position: | chr29:19125174-19125521 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 240 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 132, 79 |
| Conread position: | 220-559 |
| Cow position: | chr29:22029106-22028771 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 246 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 111, 77 |
| Conread position: | 222-556 |
| Cow position: | chr29:31674465-31674818 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 242 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 85, 259 |
| Conread position: | 224-571 |
| Cow position: | chr29:10058699-10058340 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 256 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 72, 201 |
| Conread position: | 230-573 |
| Cow position: | chr29:39111472-39111123 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 256 |
| Alignm E-value: | 7.00005e-41 |
| Alignm gaps (pig, cow): | 83, 225 |
| Conread position: | 232-502 |
| Cow position: | chr29:29314810-29314520 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 200 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 63, 0 |
| Conread position: | 239-494 |
| Cow position: | chr29:29176761-29176499 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 187 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 56, 15 |
| Conread position: | 241-591 |
| Cow position: | chr29:31594276-31593937 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 254 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 66, 191 |
| Conread position: | 242-589 |
| Cow position: | chr29:32733173-32733512 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 226 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 63, 84 |
| Conread position: | 246-554 |
| Cow position: | chr29:31943739-31944053 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 230 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 106, 62 |
| Conread position: | 249-460 |
| Cow position: | chr29:27329754-27329979 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 159 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 47, 105 |
| Conread position: | 250-494 |
| Cow position: | chr29:4002759-4003010 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 179 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 47, 242 |
| Conread position: | 258-581 |
| Cow position: | chr29:34359109-34358766 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 246 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 36, 300 |
| Conread position: | 268-440 |
| Cow position: | chr29:27846350-27846530 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 134 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 45, 79 |
| Conread position: | 278-555 |
| Cow position: | chr29:7624075-7624351 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 202 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 24, 40 |
| Conread position: | 280-496 |
| Cow position: | chr29:31200163-31200379 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 147 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 62, 34 |
| Conread position: | 293-476 |
| Cow position: | chr29:23220582-23220399 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 136 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 47, 158 |
| Conread position: | 299-476 |
| Cow position: | chr29:18012480-18012660 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 134 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 53, 44 |
| Conread position: | 299-501 |
| Cow position: | chr29:28840079-28840281 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 150 |
| Alignm E-value: | 9e-33 |
| Alignm gaps (pig, cow): | 39, 186 |
| Conread position: | 299-556 |
| Cow position: | chr29:1614851-1615114 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 172 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 41, 81 |
| Conread position: | 299-586 |
| Cow position: | chr29:1007742-1008035 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 206 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 38, 83 |
| Conread position: | 300-432 |
| Cow position: | chr29:33551639-33551505 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 102 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 300-555 |
| Cow position: | chr29:29324487-29324234 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 197 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 186, 31 |
| Conread position: | 300-577 |
| Cow position: | chr29:20770270-20770553 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 206 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 43, 110 |
| Conread position: | 301-501 |
| Cow position: | chr29:26559314-26559121 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 142 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 153, 44 |
| Conread position: | 301-559 |
| Cow position: | chr29:36952372-36952122 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 183 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 37, 125 |
| Conread position: | 303-455 |
| Cow position: | chr29:40634209-40634062 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 116 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 57, 11 |
| Conread position: | 306-560 |
| Cow position: | chr29:5063080-5063334 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 192 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 172, 41 |
| Conread position: | 308-479 |
| Cow position: | chr29:40873943-40874116 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 122 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 308-502 |
| Cow position: | chr29:38978464-38978657 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 147 |
| Alignm E-value: | 9e-33 |
| Alignm gaps (pig, cow): | 28, 133 |
| Conread position: | 308-531 |
| Cow position: | chr29:32176614-32176830 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 160 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 27, 41 |
| Conread position: | 308-550 |
| Cow position: | chr29:23825286-23825031 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 189 |
| Alignm E-value: | 6e-39 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 308-559 |
| Cow position: | chr29:38980136-38979890 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 176 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 52, 29 |
| Conread position: | 308-562 |
| Cow position: | chr29:44139311-44139052 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 193 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 32, 38 |
| Conread position: | 308-579 |
| Cow position: | chr29:30548708-30548981 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 199 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 36, 237 |
| Conread position: | 308-586 |
| Cow position: | chr29:36248969-36249254 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 189 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 34, 159 |
| Conread position: | 310-556 |
| Cow position: | chr29:29923639-29923389 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 177 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 33, 90 |
| Conread position: | 313-441 |
| Cow position: | chr29:31477177-31477046 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 106 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 29, 42 |
| Conread position: | 314-501 |
| Cow position: | chr29:21285300-21285484 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 135 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 45, 24 |
| Conread position: | 317-577 |
| Cow position: | chr29:22167138-22166879 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 176 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 21, 156 |
| Conread position: | 322-576 |
| Cow position: | chr29:16290673-16290931 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 176 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 37, 121 |
| Conread position: | 330-577 |
| Cow position: | chr29:31651367-31651609 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 170 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 31, 15 |
| Conread position: | 335-583 |
| Cow position: | chr29:22735144-22734891 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 180 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 29, 12 |
| Conread position: | 337-584 |
| Cow position: | chr29:28066455-28066694 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 171 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 154, 12 |
| Conread position: | 340-502 |
| Cow position: | chr29:34687803-34687961 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 117 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 5, 0 |
| Conread position: | 342-555 |
| Cow position: | chr29:32197664-32197880 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 162 |
| Alignm E-value: | 6e-39 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 345-594 |
| Cow position: | chr29:16278958-16279198 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 171 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 15, 63 |
| Conread position: | 349-556 |
| Cow position: | chr29:17804509-17804717 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 147 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 10, 83 |
| Conread position: | 349-559 |
| Cow position: | chr29:26540566-26540350 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 149 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 349-559 |
| Cow position: | chr29:36357103-36357318 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 157 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 11, 63 |
| Conread position: | 350-537 |
| Cow position: | chr29:22723576-22723767 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 143 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 351-494 |
| Cow position: | chr29:742673-742530 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 110 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 8, 96 |
| Conread position: | 358-590 |
| Cow position: | chr29:39038285-39038048 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 169 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 134, 0 |
| Conread position: | 359-561 |
| Cow position: | chr29:9378622-9378827 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 149 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 123, 0 |
| Conread position: | 359-577 |
| Cow position: | chr29:40791295-40791504 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 151 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 159, 31 |
| Conread position: | 359-586 |
| Cow position: | chr29:4070613-4070834 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 156 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 162, 38 |
| Conread position: | 360-582 |
| Cow position: | chr29:29308586-29308368 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 160 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 11, 124 |
| Conread position: | 360-584 |
| Cow position: | chr29:7290762-7290986 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 160 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 162, 182 |
| Conread position: | 361-556 |
| Cow position: | chr29:36781317-36781123 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 146 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 161, 123 |
| Conread position: | 363-559 |
| Cow position: | chr29:19363700-19363898 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 149 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 124, 48 |
| Conread position: | 364-586 |
| Cow position: | chr29:22729558-22729779 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 161 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 117, 38 |
| Conread position: | 370-556 |
| Cow position: | chr29:15796482-15796671 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 140 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 72, 40 |
| Conread position: | 370-576 |
| Cow position: | chr29:15797948-15798157 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 154 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 72, 83 |
| Conread position: | 370-595 |
| Cow position: | chr29:936206-936429 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 165 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 121, 13 |
| Conread position: | 380-577 |
| Cow position: | chr29:32215713-32215912 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 142 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 10, 24 |
| Conread position: | 381-559 |
| Cow position: | chr29:7444054-7443877 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 132 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 73, 63 |
| Conread position: | 395-559 |
| Cow position: | chr29:17282089-17282251 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 122 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 127, 57 |
| Conread position: | 420-581 |
| Cow position: | chr29:22776125-22776287 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 118 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 60, 145 |
Show alignments to all cow chromosomes.