Cow genome map
| Conread name: | Emb1-C0005184_M01 |
| Conread position: | 23-428 |
| Cow position: | chr1:32360362-32360757 (view UCSC Genome Browser custom track) |
| Alignm length: | 416 |
| Alignm identity: | 300 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 119, 66 |
| Conread position: | 48-422 |
| Cow position: | chr1:43893678-43893314 (view UCSC Genome Browser custom track) |
| Alignm length: | 383 |
| Alignm identity: | 266 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 87, 140 |
| Conread position: | 53-328 |
| Cow position: | chr1:71045496-71045216 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 207 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 91, 129 |
| Conread position: | 53-428 |
| Cow position: | chr1:92009626-92009253 (view UCSC Genome Browser custom track) |
| Alignm length: | 385 |
| Alignm identity: | 285 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 91, 136 |
| Conread position: | 34-282 |
| Cow position: | chr10:3115201-3114967 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 182 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 99, 147 |
| Conread position: | 34-428 |
| Cow position: | chr10:6567944-6567558 (view UCSC Genome Browser custom track) |
| Alignm length: | 403 |
| Alignm identity: | 298 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 109, 12 |
| Conread position: | 39-177 |
| Cow position: | chr10:24785823-24785677 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 116 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 105, 0 |
| Conread position: | 46-428 |
| Cow position: | chr10:59675903-59676280 (view UCSC Genome Browser custom track) |
| Alignm length: | 392 |
| Alignm identity: | 290 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 98, 135 |
| Conread position: | 52-406 |
| Cow position: | chr10:22053255-22053608 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 240 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 13, 26 |
| Conread position: | 46-355 |
| Cow position: | chr11:4060303-4060592 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 229 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 7, 18 |
| Conread position: | 53-325 |
| Cow position: | chr11:46473972-46474251 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 209 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 87, 135 |
| Conread position: | 32-179 |
| Cow position: | chr12:28650644-28650487 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 117 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 69-391 |
| Cow position: | chr13:46298206-46297892 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 252 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 74, 50 |
| Conread position: | 18-175 |
| Cow position: | chr14:46654236-46654068 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 123 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 52-423 |
| Cow position: | chr14:24683834-24683463 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 282 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 92, 20 |
| Conread position: | 30-177 |
| Cow position: | chr15:5912948-5913102 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 117 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 109, 42 |
| Conread position: | 50-426 |
| Cow position: | chr15:33681005-33681367 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 275 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 94, 132 |
| Conread position: | 33-428 |
| Cow position: | chr16:53086828-53087210 (view UCSC Genome Browser custom track) |
| Alignm length: | 403 |
| Alignm identity: | 285 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 102, 144 |
| Conread position: | 50-177 |
| Cow position: | chr16:10857885-10858020 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 104 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 94, 0 |
| Conread position: | 48-171 |
| Cow position: | chr18:6290495-6290365 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 102 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 96, 0 |
| Conread position: | 48-428 |
| Cow position: | chr18:36907463-36907835 (view UCSC Genome Browser custom track) |
| Alignm length: | 391 |
| Alignm identity: | 286 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 94, 128 |
| Conread position: | 48-428 |
| Cow position: | chr18:36911989-36912361 (view UCSC Genome Browser custom track) |
| Alignm length: | 391 |
| Alignm identity: | 286 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 94, 128 |
| Conread position: | 38-313 |
| Cow position: | chr2:72758363-72758097 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 205 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 106, 144 |
| Conread position: | 23-328 |
| Cow position: | chr21:8981294-8981582 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 213 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 177, 10 |
| Conread position: | 51-175 |
| Cow position: | chr23:18698284-18698417 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 105 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 72, 0 |
| Conread position: | 81-347 |
| Cow position: | chr23:24613456-24613190 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 202 |
| Alignm E-value: | 8e-36 |
| Alignm gaps (pig, cow): | 6, 101 |
| Conread position: | 41-428 |
| Cow position: | chr24:41333154-41333534 (view UCSC Genome Browser custom track) |
| Alignm length: | 395 |
| Alignm identity: | 301 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 99, 37 |
| Conread position: | 53-178 |
| Cow position: | chr24:6416389-6416257 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 105 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 89, 11 |
| Conread position: | 115-428 |
| Cow position: | chr24:30115756-30115459 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 230 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 46-280 |
| Cow position: | chr25:33572534-33572774 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 166 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 113, 30 |
| Conread position: | 93-278 |
| Cow position: | chr26:6322229-6322034 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 149 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 15, 104 |
| Conread position: | 45-340 |
| Cow position: | chr3:22353867-22353573 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 231 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 99, 143 |
| Conread position: | 48-378 |
| Cow position: | chr3:40345120-40344798 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 247 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 96, 126 |
| Conread position: | 39-314 |
| Cow position: | chr4:6166579-6166852 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 209 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 21 |
| Conread position: | 48-428 |
| Cow position: | chr4:40414895-40415270 (view UCSC Genome Browser custom track) |
| Alignm length: | 385 |
| Alignm identity: | 277 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 104, 136 |
| Conread position: | 6-428 |
| Cow position: | chr5:7808027-7808453 (view UCSC Genome Browser custom track) |
| Alignm length: | 436 |
| Alignm identity: | 309 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 39 |
| Conread position: | 28-178 |
| Cow position: | chr5:27656663-27656517 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 111 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 34-347 |
| Cow position: | chr5:12563268-12563574 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 235 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 40, 15 |
| Conread position: | 48-390 |
| Cow position: | chr5:69099295-69098948 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 237 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 97, 0 |
| Conread position: | 65-305 |
| Cow position: | chr5:57365315-57365545 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 182 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 83, 0 |
| Conread position: | 116-321 |
| Cow position: | chr5:25900245-25900447 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 156 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 28, 66 |
| Conread position: | 25-428 |
| Cow position: | chr7:12413746-12414125 (view UCSC Genome Browser custom track) |
| Alignm length: | 416 |
| Alignm identity: | 287 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 17, 49 |
| Conread position: | 143-428 |
| Cow position: | chr7:57208903-57209182 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 222 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 129, 30 |
| Conread position: | 6-172 |
| Cow position: | chr8:225602-225780 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 131 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 70, 21 |
| Conread position: | 46-265 |
| Cow position: | chr8:19989651-19989427 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 171 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 99, 153 |
| Conread position: | 43-175 |
| Cow position: | chr9:34945152-34945291 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 110 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 101, 19 |
| Conread position: | 48-172 |
| Cow position: | chr9:61997310-61997187 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 98 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 71, 0 |
| Conread position: | 11-177 |
| Cow position: | chrX:22139276-22139450 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 133 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 60, 10 |
| Conread position: | 32-244 |
| Cow position: | chrX:21666288-21666510 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 164 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 25, 152 |
| Conread position: | 33-279 |
| Cow position: | chrX:1728782-1729020 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 187 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 30, 150 |
| Conread position: | 49-250 |
| Cow position: | chrX:630529-630724 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 156 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 86, 23 |
| Conread position: | 50-428 |
| Cow position: | chrX:29875227-29875595 (view UCSC Genome Browser custom track) |
| Alignm length: | 392 |
| Alignm identity: | 285 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 94, 24 |
| Conread position: | 53-417 |
| Cow position: | chrX:27450261-27450633 (view UCSC Genome Browser custom track) |
| Alignm length: | 382 |
| Alignm identity: | 275 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 132 |
| Conread position: | 86-428 |
| Cow position: | chrX:46984845-46985187 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 234 |
| Alignm E-value: | 8e-35 |
| Alignm gaps (pig, cow): | 90, 58 |