• Home
• Research
• Resources
• Publications
• About
• People
• Events
• Jobs
• News
• Contact

Cow genome map

           
Conread name:
           
Emb1-C0005194_P05
        

               
Conread position:
               
1-418
               

               
Cow position:
               
chr1:69536631-69537048 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 117
               

               
Conread position:
               
1-422
               

               
Cow position:
               
chr1:33711789-33712216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 33
               

               
Conread position:
               
2-420
               

               
Cow position:
               
chr1:57656289-57656695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 17
               

               
Conread position:
               
2-422
               

               
Cow position:
               
chr1:62244916-62244495 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
111, 16
               

               
Conread position:
               
2-422
               

               
Cow position:
               
chr1:89770953-89770532 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 93
               

               
Conread position:
               
2-422
               

               
Cow position:
               
chr1:97123562-97123964 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
111, 67
               

               
Conread position:
               
4-242
               

               
Cow position:
               
chr1:55323788-55323550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
109, 63
               

               
Conread position:
               
4-422
               

               
Cow position:
               
chr1:52359547-52359125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 205
               

               
Conread position:
               
5-292
               

               
Cow position:
               
chr1:5501707-5501996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 202
               

               
Conread position:
               
5-309
               

               
Cow position:
               
chr1:13253699-13253400 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
296, 81
               

               
Conread position:
               
5-334
               

               
Cow position:
               
chr1:40953443-40953762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 67
               

               
Conread position:
               
5-376
               

               
Cow position:
               
chr1:69922731-69922361 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 198
               

               
Conread position:
               
5-410
               

               
Cow position:
               
chr1:25549795-25550197 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 242
               

               
Conread position:
               
5-413
               

               
Cow position:
               
chr1:33550655-33551062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 180
               

               
Conread position:
               
5-415
               

               
Cow position:
               
chr1:69402724-69403134 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 202
               

               
Conread position:
               
5-420
               

               
Cow position:
               
chr1:56194199-56193781 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 150
               

               
Conread position:
               
5-420
               

               
Cow position:
               
chr1:63606051-63605631 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 203
               

               
Conread position:
               
5-421
               

               
Cow position:
               
chr1:18244657-18244233 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 241
               

               
Conread position:
               
5-421
               

               
Cow position:
               
chr1:22000225-21999806 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 203
               

               
Conread position:
               
5-421
               

               
Cow position:
               
chr1:87244531-87244962 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
304, 104
               

               
Conread position:
               
5-422
               

               
Cow position:
               
chr1:8824794-8825203 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
372, 195
               

               
Conread position:
               
5-422
               

               
Cow position:
               
chr1:25180299-25179878 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 24
               

               
Conread position:
               
5-422
               

               
Cow position:
               
chr1:28872809-28873226 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 202
               

               
Conread position:
               
5-422
               

               
Cow position:
               
chr1:42736189-42736605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 202
               

               
Conread position:
               
5-422
               

               
Cow position:
               
chr1:49974456-49974038 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 20
               

               
Conread position:
               
5-422
               

               
Cow position:
               
chr1:52233367-52232963 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
372, 34
               

               
Conread position:
               
5-422
               

               
Cow position:
               
chr1:57567682-57568103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 202
               

               
Conread position:
               
5-422
               

               
Cow position:
               
chr1:62854095-62853693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
377, 110
               

               
Conread position:
               
5-422
               

               
Cow position:
               
chr1:68607816-68607391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
103, 202
               

               
Conread position:
               
5-422
               

               
Cow position:
               
chr1:72187139-72186720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 200
               

               
Conread position:
               
5-422
               

               
Cow position:
               
chr1:72656715-72657139 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
103, 29
               

               
Conread position:
               
5-422
               

               
Cow position:
               
chr1:76545808-76545387 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
194, 199
               

               
Conread position:
               
5-422
               

               
Cow position:
               
chr1:76623213-76622805 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
372, 195
               

               
Conread position:
               
5-422
               

               
Cow position:
               
chr1:79336072-79335652 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
110, 201
               

               
Conread position:
               
5-422
               

               
Cow position:
               
chr1:79457235-79456820 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 168
               

               
Conread position:
               
5-422
               

               
Cow position:
               
chr1:88130490-88130923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
102, 198
               

               
Conread position:
               
5-422
               

               
Cow position:
               
chr1:88635110-88635524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
372, 29
               

               
Conread position:
               
5-422
               

               
Cow position:
               
chr1:89899969-89899551 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 64
               

               
Conread position:
               
5-422
               

               
Cow position:
               
chr1:93854252-93854673 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 202
               

               
Conread position:
               
5-422
               

               
Cow position:
               
chr1:100597650-100597221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 202
               

               
Conread position:
               
5-422
               

               
Cow position:
               
chr1:101858248-101857833 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 77
               

               
Conread position:
               
6-422
               

               
Cow position:
               
chr1:87207679-87207275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 104
               

               
Conread position:
               
8-422
               

               
Cow position:
               
chr1:76752915-76752501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
187, 196
               

               
Conread position:
               
8-422
               

               
Cow position:
               
chr1:89740509-89740111 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 220
               

               
Conread position:
               
9-355
               

               
Cow position:
               
chr1:102548971-102549311 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 16
               

               
Conread position:
               
9-370
               

               
Cow position:
               
chr1:62806070-62805707 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
104, 194
               

               
Conread position:
               
9-422
               

               
Cow position:
               
chr1:86699482-86699065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
107, 129
               

               
Conread position:
               
9-422
               

               
Cow position:
               
chr1:102435292-102434886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
90, 195
               

               
Conread position:
               
22-422
               

               
Cow position:
               
chr1:40307816-40308215 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
223, 302
               

               
Conread position:
               
29-269
               

               
Cow position:
               
chr1:85881497-85881741 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
24, 18
               

               
Conread position:
               
62-422
               

               
Cow position:
               
chr1:72080561-72080931 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 185
               

               
Conread position:
               
71-315
               

               
Cow position:
               
chr1:21541359-21541600 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
37, 21
               

               
Conread position:
               
102-301
               

               
Cow position:
               
chr1:79885000-79884800 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
22, 144
               

               
Conread position:
               
102-420
               

               
Cow position:
               
chr1:99910783-99911109 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
165, 142
               

               
Conread position:
               
103-422
               

               
Cow position:
               
chr1:11863403-11863092 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
274, 75
               

               
Conread position:
               
103-422
               

               
Cow position:
               
chr1:23050673-23050989 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
238, 116
               

               
Conread position:
               
109-422
               

               
Cow position:
               
chr1:12062355-12062044 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 18
               

               
Conread position:
               
128-422
               

               
Cow position:
               
chr1:48245669-48245964 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 76
               

               
Conread position:
               
1-422
               

               
Cow position:
               
chr10:10478394-10477965 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 101
               

               
Conread position:
               
1-422
               

               
Cow position:
               
chr10:62216359-62216782 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 23
               

               
Conread position:
               
4-239
               

               
Cow position:
               
chr10:61297085-61297319 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
103, 145
               

               
Conread position:
               
5-268
               

               
Cow position:
               
chr10:10581429-10581693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 198
               

               
Conread position:
               
5-343
               

               
Cow position:
               
chr10:57990208-57989871 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 135
               

               
Conread position:
               
5-420
               

               
Cow position:
               
chr10:276349-276763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 30
               

               
Conread position:
               
5-421
               

               
Cow position:
               
chr10:37769578-37769996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 202
               

               
Conread position:
               
5-422
               

               
Cow position:
               
chr10:19511363-19511782 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 65
               

               
Conread position:
               
5-422
               

               
Cow position:
               
chr10:21486672-21487090 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 181
               

               
Conread position:
               
5-422
               

               
Cow position:
               
chr10:22100997-22101408 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 181
               

               
Conread position:
               
5-422
               

               
Cow position:
               
chr10:25359155-25359575 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 173
               

               
Conread position:
               
5-422
               

               
Cow position:
               
chr10:38345607-38345186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 202
               

               
Conread position:
               
5-422
               

               
Cow position:
               
chr10:39041549-39041126 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 159
               

               
Conread position:
               
5-422
               

               
Cow position:
               
chr10:62409096-62408681 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 188
               

               
Conread position:
               
5-422
               

               
Cow position:
               
chr10:62778098-62778523 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 245
               

               
Conread position:
               
7-422
               

               
Cow position:
               
chr10:29696000-29696412 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
102, 27
               

               
Conread position:
               
9-422
               

               
Cow position:
               
chr10:19143578-19143162 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
104, 19
               

               
Conread position:
               
9-422
               

               
Cow position:
               
chr10:38538730-38538321 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
200, 32
               

               
Conread position:
               
13-422
               

               
Cow position:
               
chr10:124072-124486 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 196
               

               
Conread position:
               
13-422
               

               
Cow position:
               
chr10:32650495-32650909 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 195
               

               
Conread position:
               
29-421
               

               
Cow position:
               
chr10:19496496-19496111 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 25
               

               
Conread position:
               
49-295
               

               
Cow position:
               
chr10:13366053-13365800 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
57, 200
               

               
Conread position:
               
56-422
               

               
Cow position:
               
chr10:46191181-46191534 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
127-422
               

               
Cow position:
               
chr10:39854134-39853838 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
250, 115
               

               
Conread position:
               
131-389
               

               
Cow position:
               
chr10:22842665-22842916 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
214, 113
               

               
Conread position:
               
183-422
               

               
Cow position:
               
chr10:2123326-2123086 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 21
               

               
Conread position:
               
1-296
               

               
Cow position:
               
chr11:76375079-76374793 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
274, 117
               

               
Conread position:
               
1-422
               

               
Cow position:
               
chr11:85394419-85393997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
107, 202
               

               
Conread position:
               
4-422
               

               
Cow position:
               
chr11:30125842-30125434 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
106, 12
               

               
Conread position:
               
5-393
               

               
Cow position:
               
chr11:38836023-38835630 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 202
               

               
Conread position:
               
5-420
               

               
Cow position:
               
chr11:44861131-44860717 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
104, 242
               

               
Conread position:
               
5-422
               

               
Cow position:
               
chr11:10846839-10847259 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 29
               

               
Conread position:
               
5-422
               

               
Cow position:
               
chr11:11987513-11987922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 199
               

               
Conread position:
               
5-422
               

               
Cow position:
               
chr11:12359028-12358611 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 242
               

               
Conread position:
               
5-422
               

               
Cow position:
               
chr11:19103092-19102672 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 139
               

               
Conread position:
               
5-422
               

               
Cow position:
               
chr11:24392720-24393131 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
103, 94
               

               
Conread position:
               
5-422
               

               
Cow position:
               
chr11:26125534-26125117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
278, 195
               

               
Conread position:
               
5-422
               

               
Cow position:
               
chr11:28055200-28054786 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 200
               

               
Conread position:
               
5-422
               

               
Cow position:
               
chr11:29669235-29668814 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 202
               

               
Conread position:
               
5-422
               

               
Cow position:
               
chr11:37492250-37491827 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
127, 87
               

               
Conread position:
               
5-422
               

               
Cow position:
               
chr11:41171299-41170878 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
103, 202
               

               
Conread position:
               
5-422
               

               
Cow position:
               
chr11:43515235-43514816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 24
               

               
Conread position:
               
5-422
               

               
Cow position:
               
chr11:44157839-44157423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
372, 239
               

               
Conread position:
               
5-422
               

               
Cow position:
               
chr11:72110565-72110151 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 31
               

               
Conread position:
               
6-418
               

               
Cow position:
               
chr11:25526972-25527370 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 97
               

               
Conread position:
               
8-173
               

               
Cow position:
               
chr11:31925597-31925765 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
96, 135
               

               
Conread position:
               
8-392
               

               
Cow position:
               
chr11:4028153-4027770 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 205
               

               
Conread position:
               
8-422
               

               
Cow position:
               
chr11:44496189-44495784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
282, 90
               

               
Conread position:
               
9-422
               

               
Cow position:
               
chr11:15998297-15998707 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
104, 25
               

               
Conread position:
               
10-421
               

               
Cow position:
               
chr11:17108287-17107873 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
103, 237
               

               
Conread position:
               
10-422
               

               
Cow position:
               
chr11:10210565-10210148 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 104
               

               
Conread position:
               
16-422
               

               
Cow position:
               
chr11:4271462-4271057 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 39
               

               
Conread position:
               
21-261
               

               
Cow position:
               
chr11:17280825-17280593 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
24-339
               

               
Cow position:
               
chr11:77235174-77235495 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 227
               

               
Conread position:
               
50-422
               

               
Cow position:
               
chr11:7113040-7113409 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 99
               

               
Conread position:
               
103-411
               

               
Cow position:
               
chr11:45110855-45111163 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
109, 144
               

               
Conread position:
               
146-422
               

               
Cow position:
               
chr11:10089873-10090147 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
195, 55
               

               
Conread position:
               
176-339
               

               
Cow position:
               
chr11:46962849-46962692 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
1-422
               

               
Cow position:
               
chr12:28766339-28765918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 47
               

               
Conread position:
               
5-268
               

               
Cow position:
               
chr12:21197513-21197772 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
9, 25
               

               
Conread position:
               
5-421
               

               
Cow position:
               
chr12:8678438-8678022 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
195, 162
               

               
Conread position:
               
5-422
               

               
Cow position:
               
chr12:2479-2900 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
104, 242
               

               
Conread position:
               
5-422
               

               
Cow position:
               
chr12:1402174-1402592 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
194, 200
               

               
Conread position:
               
5-422
               

               
Cow position:
               
chr12:6406966-6406547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 137
               

               
Conread position:
               
5-422
               

               
Cow position:
               
chr12:11097922-11098343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 202
               

               
Conread position:
               
6-420
               

               
Cow position:
               
chr12:8310866-8311280 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 242
               

               
Conread position:
               
9-422
               

               
Cow position:
               
chr12:42860130-42859726 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
104, 184
               

               
Conread position:
               
10-421
               

               
Cow position:
               
chr12:3360599-3361004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
367, 78
               

               
Conread position:
               
12-421
               

               
Cow position:
               
chr12:10483736-10484133 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
370, 22
               

               
Conread position:
               
13-422
               

               
Cow position:
               
chr12:25101370-25100960 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
182, 191
               

               
Conread position:
               
16-422
               

               
Cow position:
               
chr12:21901636-21902040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
5, 191
               

               
Conread position:
               
29-188
               

               
Cow position:
               
chr12:601346-601184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
82, 0
               

               
Conread position:
               
1-218
               

               
Cow position:
               
chr13:13046364-13046149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
99, 113
               

               
Conread position:
               
1-422
               

               
Cow position:
               
chr13:20542905-20542493 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 49
               

               
Conread position:
               
1-422
               

               
Cow position:
               
chr13:31832064-31832480 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
376, 114
               

               
Conread position:
               
2-422
               

               
Cow position:
               
chr13:34143201-34142779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 245
               

               
Conread position:
               
4-422
               

               
Cow position:
               
chr13:54284050-54284452 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 56
               

               
Conread position:
               
5-274
               

               
Cow position:
               
chr13:4481936-4482201 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
106, 179
               

               
Conread position:
               
5-358
               

               
Cow position:
               
chr13:32544408-32544754 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
107, 29
               

               
Conread position:
               
5-419
               

               
Cow position:
               
chr13:15924923-15924507 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
104, 198
               

               
Conread position:
               
5-422
               

               
Cow position:
               
chr13:1593695-1593275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 199
               

               
Conread position:
               
5-422
               

               
Cow position:
               
chr13:3276619-3277034 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 29
               

               
Conread position:
               
5-422
               

               
Cow position:
               
chr13:15521054-15520635 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 202
               

               
Conread position:
               
5-422
               

               
Cow position:
               
chr13:31612875-31612455 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 11
               

               
Conread position:
               
5-422
               

               
Cow position:
               
chr13:32738359-32737942 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 200
               

               
Conread position:
               
5-422
               

               
Cow position:
               
chr13:33336863-33336462 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 181
               

               
Conread position:
               
5-422
               

               
Cow position:
               
chr13:34042905-34042489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 195
               

               
Conread position:
               
5-422
               

               
Cow position:
               
chr13:34692623-34693043 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
104, 59
               

               
Conread position:
               
7-422
               

               
Cow position:
               
chr13:33825268-33824851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 108
               

               
Conread position:
               
8-422
               

               
Cow position:
               
chr13:30302535-30302944 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 78
               

               
Conread position:
               
8-422
               

               
Cow position:
               
chr13:33928095-33927690 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 26
               

               
Conread position:
               
9-415
               

               
Cow position:
               
chr13:3654847-3654443 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
104, 373
               

               
Conread position:
               
11-422
               

               
Cow position:
               
chr13:35756706-35757121 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
102, 196
               

               
Conread position:
               
12-322
               

               
Cow position:
               
chr13:30237637-30237945 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
90, 205
               

               
Conread position:
               
16-387
               

               
Cow position:
               
chr13:2232132-2232505 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 13
               

               
Conread position:
               
95-422
               

               
Cow position:
               
chr13:23003966-23003636 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 113
               

               
Conread position:
               
1-294
               

               
Cow position:
               
chr14:45160197-45160495 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
112, 245
               

               
Conread position:
               
1-422
               

               
Cow position:
               
chr14:45712648-45712230 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 208
               

               
Conread position:
               
1-422
               

               
Cow position:
               
chr14:45767336-45767758 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 248
               

               
Conread position:
               
1-422
               

               
Cow position:
               
chr14:50109912-50110322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
111, 186
               

               
Conread position:
               
5-420
               

               
Cow position:
               
chr14:5528403-5528816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
194, 105
               

               
Conread position:
               
5-420
               

               
Cow position:
               
chr14:7471712-7472128 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
106, 181
               

               
Conread position:
               
5-420
               

               
Cow position:
               
chr14:14309728-14309323 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
150, 106
               

               
Conread position:
               
5-421
               

               
Cow position:
               
chr14:22032346-22031932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 181
               

               
Conread position:
               
5-421
               

               
Cow position:
               
chr14:37223238-37223657 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 198
               

               
Conread position:
               
5-422
               

               
Cow position:
               
chr14:7831201-7830784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
119, 13
               

               
Conread position:
               
5-422
               

               
Cow position:
               
chr14:11154817-11154409 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
104, 181
               

               
Conread position:
               
5-422
               

               
Cow position:
               
chr14:13302367-13302786 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
104, 139
               

               
Conread position:
               
5-422
               

               
Cow position:
               
chr14:13660655-13660232 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 194
               

               
Conread position:
               
5-422
               

               
Cow position:
               
chr14:16273961-16273539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 203
               

               
Conread position:
               
5-422
               

               
Cow position:
               
chr14:17001719-17001298 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 202
               

               
Conread position:
               
5-422
               

               
Cow position:
               
chr14:17684732-17685152 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 66
               

               
Conread position:
               
5-422
               

               
Cow position:
               
chr14:40339046-40339439 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
372, 186
               

               
Conread position:
               
5-422
               

               
Cow position:
               
chr14:44421894-44422310 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
107, 91
               

               
Conread position:
               
5-422
               

               
Cow position:
               
chr14:44856089-44855670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
104, 199
               

               
Conread position:
               
5-422
               

               
Cow position:
               
chr14:45850564-45850978 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
239, 0
               

               
Conread position:
               
6-421
               

               
Cow position:
               
chr14:35387794-35387394 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
74, 199
               

               
Conread position:
               
6-422
               

               
Cow position:
               
chr14:47623907-47624316 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
103, 18
               

               
Conread position:
               
9-422
               

               
Cow position:
               
chr14:22018744-22019149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 182
               

               
Conread position:
               
11-421
               

               
Cow position:
               
chr14:19328924-19328513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
188, 193
               

               
Conread position:
               
103-283
               

               
Cow position:
               
chr14:1500467-1500645 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
7, 142
               

               
Conread position:
               
103-422
               

               
Cow position:
               
chr14:15277141-15276824 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
274, 97
               

               
Conread position:
               
156-422
               

               
Cow position:
               
chr14:41085293-41085026 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
221, 88
               

               
Conread position:
               
1-292
               

               
Cow position:
               
chr15:35754490-35754203 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
198, 100
               

               
Conread position:
               
1-311
               

               
Cow position:
               
chr15:6371506-6371205 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
104, 137
               

               
Conread position:
               
1-420
               

               
Cow position:
               
chr15:4649172-4649582 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 15
               

               
Conread position:
               
1-421
               

               
Cow position:
               
chr15:37391841-37392253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
172, 112
               

               
Conread position:
               
1-422
               

               
Cow position:
               
chr15:3843487-3843069 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
112, 140
               

               
Conread position:
               
1-422
               

               
Cow position:
               
chr15:4795015-4795436 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
102, 32
               

               
Conread position:
               
1-422
               

               
Cow position:
               
chr15:6078067-6078498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 82
               

               
Conread position:
               
1-422
               

               
Cow position:
               
chr15:15347787-15347362 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
107, 206
               

               
Conread position:
               
1-422
               

               
Cow position:
               
chr15:36641967-36642372 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 37
               

               
Conread position:
               
1-422
               

               
Cow position:
               
chr15:41365516-41365938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
106, 136
               

               
Conread position:
               
4-421
               

               
Cow position:
               
chr15:1763426-1763847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 162
               

               
Conread position:
               
4-422
               

               
Cow position:
               
chr15:32722841-32722429 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
289, 25
               

               
Conread position:
               
5-420
               

               
Cow position:
               
chr15:4733201-4733615 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 63
               

               
Conread position:
               
5-421
               

               
Cow position:
               
chr15:6156623-6156197 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 37
               

               
Conread position:
               
5-421
               

               
Cow position:
               
chr15:17039914-17039497 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
102, 201
               

               
Conread position:
               
5-421
               

               
Cow position:
               
chr15:24294428-24294848 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
103, 202
               

               
Conread position:
               
5-421
               

               
Cow position:
               
chr15:44828152-44828565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 242
               

               
Conread position:
               
5-422
               

               
Cow position:
               
chr15:525515-525092 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 55
               

               
Conread position:
               
5-422
               

               
Cow position:
               
chr15:2075994-2076405 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
367, 81
               

               
Conread position:
               
5-422
               

               
Cow position:
               
chr15:4921485-4921901 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
192, 19
               

               
Conread position:
               
5-422
               

               
Cow position:
               
chr15:7836579-7837001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 204
               

               
Conread position:
               
5-422
               

               
Cow position:
               
chr15:12421826-12421408 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
194, 199
               

               
Conread position:
               
5-422
               

               
Cow position:
               
chr15:18333490-18333070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
102, 202
               

               
Conread position:
               
5-422
               

               
Cow position:
               
chr15:19738714-19738296 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 110
               

               
Conread position:
               
5-422
               

               
Cow position:
               
chr15:31358241-31358644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 56
               

               
Conread position:
               
5-422
               

               
Cow position:
               
chr15:35747633-35748051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
104, 248
               

               
Conread position:
               
5-422
               

               
Cow position:
               
chr15:42490542-42490961 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
127, 108
               

               
Conread position:
               
5-422
               

               
Cow position:
               
chr15:42936051-42936471 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 198
               

               
Conread position:
               
5-422
               

               
Cow position:
               
chr15:51215931-51216346 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 217
               

               
Conread position:
               
6-356
               

               
Cow position:
               
chr15:327748-328100 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
110, 18
               

               
Conread position:
               
6-420
               

               
Cow position:
               
chr15:18576062-18576469 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
107, 197
               

               
Conread position:
               
7-422
               

               
Cow position:
               
chr15:32495046-32494628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 200
               

               
Conread position:
               
8-392
               

               
Cow position:
               
chr15:3262064-3261679 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
136, 128
               

               
Conread position:
               
9-245
               

               
Cow position:
               
chr15:6594483-6594246 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
99, 195
               

               
Conread position:
               
9-311
               

               
Cow position:
               
chr15:7933319-7933610 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
222, 174
               

               
Conread position:
               
9-422
               

               
Cow position:
               
chr15:6554511-6554098 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
104, 132
               

               
Conread position:
               
10-420
               

               
Cow position:
               
chr15:35734802-35735211 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
8, 103
               

               
Conread position:
               
13-422
               

               
Cow position:
               
chr15:21816402-21815987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
95, 224
               

               
Conread position:
               
18-421
               

               
Cow position:
               
chr15:443959-444366 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 229
               

               
Conread position:
               
18-422
               

               
Cow position:
               
chr15:2011435-2011840 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
95, 58
               

               
Conread position:
               
28-261
               

               
Cow position:
               
chr15:5070890-5070660 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
10, 24
               

               
Conread position:
               
28-422
               

               
Cow position:
               
chr15:53338399-53338786 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 30
               

               
Conread position:
               
46-420
               

               
Cow position:
               
chr15:21666368-21665991 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 161
               

               
Conread position:
               
141-317
               

               
Cow position:
               
chr15:2924031-2924206 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
19, 104
               

               
Conread position:
               
1-197
               

               
Cow position:
               
chr16:29031903-29032100 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
111, 174
               

               
Conread position:
               
1-422
               

               
Cow position:
               
chr16:2484150-2483733 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
141, 136
               

               
Conread position:
               
1-422
               

               
Cow position:
               
chr16:25084608-25085031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 212
               

               
Conread position:
               
5-214
               

               
Cow position:
               
chr16:19713857-19713646 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
108, 0
               

               
Conread position:
               
5-293
               

               
Cow position:
               
chr16:7905634-7905924 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 81
               

               
Conread position:
               
5-388
               

               
Cow position:
               
chr16:29676314-29675934 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
104, 19
               

               
Conread position:
               
5-420
               

               
Cow position:
               
chr16:25340962-25341373 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
372, 198
               

               
Conread position:
               
5-420
               

               
Cow position:
               
chr16:27734814-27734395 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 135
               

               
Conread position:
               
5-421
               

               
Cow position:
               
chr16:6549530-6549115 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
104, 54
               

               
Conread position:
               
5-422
               

               
Cow position:
               
chr16:408041-407624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 201
               

               
Conread position:
               
5-422
               

               
Cow position:
               
chr16:1568459-1568044 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
109, 84
               

               
Conread position:
               
5-422
               

               
Cow position:
               
chr16:2411979-2411559 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 202
               

               
Conread position:
               
5-422
               

               
Cow position:
               
chr16:10204424-10204020 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 182
               

               
Conread position:
               
5-422
               

               
Cow position:
               
chr16:10437248-10437653 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
374, 178
               

               
Conread position:
               
5-422
               

               
Cow position:
               
chr16:12538934-12538514 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 202
               

               
Conread position:
               
5-422
               

               
Cow position:
               
chr16:15491698-15492118 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
102, 135
               

               
Conread position:
               
5-422
               

               
Cow position:
               
chr16:15565741-15566160 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
103, 181
               

               
Conread position:
               
5-422
               

               
Cow position:
               
chr16:20255316-20254901 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
104, 39
               

               
Conread position:
               
5-422
               

               
Cow position:
               
chr16:23253512-23253097 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 43
               

               
Conread position:
               
5-422
               

               
Cow position:
               
chr16:26662741-26663158 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
195, 199
               

               
Conread position:
               
5-422
               

               
Cow position:
               
chr16:43898278-43897857 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 133
               

               
Conread position:
               
6-422
               

               
Cow position:
               
chr16:42740425-42740013 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
103, 28
               

               
Conread position:
               
7-418
               

               
Cow position:
               
chr16:18688132-18687719 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
102, 35
               

               
Conread position:
               
8-242
               

               
Cow position:
               
chr16:7676700-7676468 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
192, 0
               

               
Conread position:
               
8-422
               

               
Cow position:
               
chr16:15183800-15184213 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
191, 133
               

               
Conread position:
               
9-422
               

               
Cow position:
               
chr16:25440616-25441028 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
95, 17
               

               
Conread position:
               
9-422
               

               
Cow position:
               
chr16:25458473-25458061 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
95, 17
               

               
Conread position:
               
9-422
               

               
Cow position:
               
chr16:29046015-29046432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
104, 198
               

               
Conread position:
               
13-336
               

               
Cow position:
               
chr16:23670593-23670274 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
25, 100
               

               
Conread position:
               
39-421
               

               
Cow position:
               
chr16:10808190-10808562 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 79
               

               
Conread position:
               
48-422
               

               
Cow position:
               
chr16:836071-836439 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 17
               

               
Conread position:
               
103-422
               

               
Cow position:
               
chr16:34529417-34529731 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
247, 141
               

               
Conread position:
               
106-422
               

               
Cow position:
               
chr16:5483416-5483733 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 36
               

               
Conread position:
               
128-422
               

               
Cow position:
               
chr16:14666714-14666419 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 77
               

               
Conread position:
               
1-422
               

               
Cow position:
               
chr17:15849963-15850384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
112, 23
               

               
Conread position:
               
1-422
               

               
Cow position:
               
chr17:39933251-39933646 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
2-274
               

               
Cow position:
               
chr17:2737943-2738216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
111, 32
               

               
Conread position:
               
5-334
               

               
Cow position:
               
chr17:2579128-2579455 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 165
               

               
Conread position:
               
5-338
               

               
Cow position:
               
chr17:15370647-15370974 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 23
               

               
Conread position:
               
5-421
               

               
Cow position:
               
chr17:13857206-13856782 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 206
               

               
Conread position:
               
5-422
               

               
Cow position:
               
chr17:19269797-19269378 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
84, 110
               

               
Conread position:
               
5-422
               

               
Cow position:
               
chr17:20401249-20401661 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 30
               

               
Conread position:
               
5-422
               

               
Cow position:
               
chr17:25737231-25737651 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 201
               

               
Conread position:
               
6-422
               

               
Cow position:
               
chr17:16859988-16859568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
102, 201
               

               
Conread position:
               
9-422
               

               
Cow position:
               
chr17:13929240-13929656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
104, 7
               

               
Conread position:
               
12-342
               

               
Cow position:
               
chr17:28109663-28109993 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
101, 16
               

               
Conread position:
               
13-420
               

               
Cow position:
               
chr17:35591792-35592199 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
96, 15
               

               
Conread position:
               
16-422
               

               
Cow position:
               
chr17:4294955-4295338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
6, 94
               

               
Conread position:
               
19-422
               

               
Cow position:
               
chr17:3643255-3642848 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
94, 188
               

               
Conread position:
               
21-422
               

               
Cow position:
               
chr17:11088138-11087736 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
178, 183
               

               
Conread position:
               
50-422
               

               
Cow position:
               
chr17:1946588-1946963 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 199
               

               
Conread position:
               
102-421
               

               
Cow position:
               
chr17:14308635-14308326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
218, 142
               

               
Conread position:
               
103-422
               

               
Cow position:
               
chr17:6259513-6259833 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 34
               

               
Conread position:
               
108-422
               

               
Cow position:
               
chr17:22131907-22132218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
274, 93
               

               
Conread position:
               
165-420
               

               
Cow position:
               
chr17:18027027-18026771 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
214, 79
               

               
Conread position:
               
1-410
               

               
Cow position:
               
chr18:16176835-16176430 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
106, 143
               

               
Conread position:
               
1-421
               

               
Cow position:
               
chr18:54024584-54024165 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
160, 47
               

               
Conread position:
               
1-422
               

               
Cow position:
               
chr18:1520901-1521324 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 23
               

               
Conread position:
               
1-422
               

               
Cow position:
               
chr18:2019908-2019490 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
376, 24
               

               
Conread position:
               
2-246
               

               
Cow position:
               
chr18:19540103-19539856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
106, 182
               

               
Conread position:
               
2-422
               

               
Cow position:
               
chr18:39748354-39748774 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
267, 111
               

               
Conread position:
               
4-385
               

               
Cow position:
               
chr18:16660230-16659846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 190
               

               
Conread position:
               
4-422
               

               
Cow position:
               
chr18:33335646-33336063 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
373, 20
               

               
Conread position:
               
5-246
               

               
Cow position:
               
chr18:25349814-25350058 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
100, 198
               

               
Conread position:
               
5-420
               

               
Cow position:
               
chr18:51257758-51258177 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 177
               

               
Conread position:
               
5-421
               

               
Cow position:
               
chr18:27838528-27838121 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
119, 108
               

               
Conread position:
               
5-422
               

               
Cow position:
               
chr18:23797426-23797843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 138
               

               
Conread position:
               
5-422
               

               
Cow position:
               
chr18:28974123-28973707 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
194, 45
               

               
Conread position:
               
5-422
               

               
Cow position:
               
chr18:33358643-33359062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
102, 241
               

               
Conread position:
               
5-422
               

               
Cow position:
               
chr18:35335260-35335675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 243
               

               
Conread position:
               
5-422
               

               
Cow position:
               
chr18:36508108-36508528 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 242
               

               
Conread position:
               
5-422
               

               
Cow position:
               
chr18:40478158-40478579 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 246
               

               
Conread position:
               
5-422
               

               
Cow position:
               
chr18:41841050-41840629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
107, 202
               

               
Conread position:
               
5-422
               

               
Cow position:
               
chr18:43147150-43146730 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 200
               

               
Conread position:
               
5-422
               

               
Cow position:
               
chr18:51480615-51481035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
194, 199
               

               
Conread position:
               
6-419
               

               
Cow position:
               
chr18:48221654-48222072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
103, 41
               

               
Conread position:
               
7-422
               

               
Cow position:
               
chr18:51310359-51310781 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 147
               

               
Conread position:
               
9-347
               

               
Cow position:
               
chr18:27986808-27987146 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 168
               

               
Conread position:
               
10-422
               

               
Cow position:
               
chr18:37504845-37505260 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
116, 133
               

               
Conread position:
               
12-420
               

               
Cow position:
               
chr18:16533766-16534172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
366, 87
               

               
Conread position:
               
39-422
               

               
Cow position:
               
chr18:53785649-53786035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 173
               

               
Conread position:
               
60-422
               

               
Cow position:
               
chr18:2887195-2886825 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 191
               

               
Conread position:
               
160-422
               

               
Cow position:
               
chr18:14130322-14130580 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 44
               

               
Conread position:
               
1-298
               

               
Cow position:
               
chr19:4252582-4252287 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 245
               

               
Conread position:
               
1-369
               

               
Cow position:
               
chr19:439871-439498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
112, 210
               

               
Conread position:
               
1-420
               

               
Cow position:
               
chr19:34198-34614 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 93
               

               
Conread position:
               
2-394
               

               
Cow position:
               
chr19:548172-548536 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
172, 39
               

               
Conread position:
               
3-422
               

               
Cow position:
               
chr19:32665310-32665730 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
109, 139
               

               
Conread position:
               
5-421
               

               
Cow position:
               
chr19:20125406-20125802 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 22
               

               
Conread position:
               
5-422
               

               
Cow position:
               
chr19:893823-893415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
5-422
               

               
Cow position:
               
chr19:7488092-7488513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
107, 202
               

               
Conread position:
               
5-422
               

               
Cow position:
               
chr19:30754953-30755381 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 240
               

               
Conread position:
               
5-422
               

               
Cow position:
               
chr19:33941391-33941810 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 202
               

               
Conread position:
               
5-422
               

               
Cow position:
               
chr19:39390301-39390708 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
194, 71
               

               
Conread position:
               
5-422
               

               
Cow position:
               
chr19:40852651-40852238 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 202
               

               
Conread position:
               
5-422
               

               
Cow position:
               
chr19:55078525-55078946 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 202
               

               
Conread position:
               
7-294
               

               
Cow position:
               
chr19:1031890-1032169 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
277, 211
               

               
Conread position:
               
7-377
               

               
Cow position:
               
chr19:29209348-29209712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
101, 79
               

               
Conread position:
               
8-181
               

               
Cow position:
               
chr19:32238082-32237899 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
99, 0
               

               
Conread position:
               
8-422
               

               
Cow position:
               
chr19:171993-172411 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
104, 199
               

               
Conread position:
               
8-422
               

               
Cow position:
               
chr19:4385267-4385680 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 178
               

               
Conread position:
               
9-422
               

               
Cow position:
               
chr19:10672523-10672106 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
104, 199
               

               
Conread position:
               
9-422
               

               
Cow position:
               
chr19:30372066-30372474 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 92
               

               
Conread position:
               
18-339
               

               
Cow position:
               
chr19:4532949-4532639 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
29-422
               

               
Cow position:
               
chr19:416456-416861 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
84, 218
               

               
Conread position:
               
50-370
               

               
Cow position:
               
chr19:27052939-27052623 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
74, 134
               

               
Conread position:
               
69-329
               

               
Cow position:
               
chr19:28376374-28376627 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
47, 135
               

               
Conread position:
               
103-422
               

               
Cow position:
               
chr19:33873307-33873626 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
96, 101
               

               
Conread position:
               
119-422
               

               
Cow position:
               
chr19:350387-350091 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
258, 125
               

               
Conread position:
               
1-421
               

               
Cow position:
               
chr2:56438501-56438085 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
103, 47
               

               
Conread position:
               
1-422
               

               
Cow position:
               
chr2:2102235-2101828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 57
               

               
Conread position:
               
1-422
               

               
Cow position:
               
chr2:44345933-44346358 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
107, 246
               

               
Conread position:
               
3-422
               

               
Cow position:
               
chr2:82166837-82167251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
374, 98
               

               
Conread position:
               
4-420
               

               
Cow position:
               
chr2:49603952-49604356 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
109, 60
               

               
Conread position:
               
4-422
               

               
Cow position:
               
chr2:14560419-14560828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 12
               

               
Conread position:
               
5-294
               

               
Cow position:
               
chr2:45214034-45213743 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 202
               

               
Conread position:
               
5-317
               

               
Cow position:
               
chr2:12224927-12224611 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 204
               

               
Conread position:
               
5-347
               

               
Cow position:
               
chr2:25888982-25888640 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
325, 239
               

               
Conread position:
               
5-401
               

               
Cow position:
               
chr2:81256030-81256439 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 18
               

               
Conread position:
               
5-419
               

               
Cow position:
               
chr2:11159905-11159488 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
102, 202
               

               
Conread position:
               
5-420
               

               
Cow position:
               
chr2:32458783-32458368 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 13
               

               
Conread position:
               
5-420
               

               
Cow position:
               
chr2:52655695-52656105 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
103, 116
               

               
Conread position:
               
5-422
               

               
Cow position:
               
chr2:283471-283050 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 202
               

               
Conread position:
               
5-422
               

               
Cow position:
               
chr2:976049-975635 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
277, 185
               

               
Conread position:
               
5-422
               

               
Cow position:
               
chr2:5905626-5905219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 242
               

               
Conread position:
               
5-422
               

               
Cow position:
               
chr2:10269435-10269018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
194, 94
               

               
Conread position:
               
5-422
               

               
Cow position:
               
chr2:13046456-13046063 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
193, 101
               

               
Conread position:
               
5-422
               

               
Cow position:
               
chr2:16899467-16899889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 140
               

               
Conread position:
               
5-422
               

               
Cow position:
               
chr2:19009456-19009875 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 37
               

               
Conread position:
               
5-422
               

               
Cow position:
               
chr2:42672162-42671745 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 138
               

               
Conread position:
               
5-422
               

               
Cow position:
               
chr2:50984006-50983586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 202
               

               
Conread position:
               
5-422
               

               
Cow position:
               
chr2:52061892-52062309 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
194, 11
               

               
Conread position:
               
5-422
               

               
Cow position:
               
chr2:65939225-65938807 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 198
               

               
Conread position:
               
5-422
               

               
Cow position:
               
chr2:72922607-72922189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
372, 239
               

               
Conread position:
               
6-243
               

               
Cow position:
               
chr2:51305681-51305445 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
107, 0
               

               
Conread position:
               
6-422
               

               
Cow position:
               
chr2:422290-422709 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
103, 368
               

               
Conread position:
               
7-350
               

               
Cow position:
               
chr2:1491203-1490860 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 112
               

               
Conread position:
               
7-422
               

               
Cow position:
               
chr2:11969532-11969127 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
109, 31
               

               
Conread position:
               
8-422
               

               
Cow position:
               
chr2:50076829-50077238 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
103, 178
               

               
Conread position:
               
9-422
               

               
Cow position:
               
chr2:24145504-24145917 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
97, 15
               

               
Conread position:
               
12-422
               

               
Cow position:
               
chr2:47810243-47810653 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 92
               

               
Conread position:
               
13-420
               

               
Cow position:
               
chr2:10186991-10186593 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
186, 15
               

               
Conread position:
               
16-422
               

               
Cow position:
               
chr2:10733603-10733199 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 132
               

               
Conread position:
               
17-421
               

               
Cow position:
               
chr2:44935845-44935446 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
362, 78
               

               
Conread position:
               
19-281
               

               
Cow position:
               
chr2:8117488-8117750 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
92, 184
               

               
Conread position:
               
28-246
               

               
Cow position:
               
chr2:75251007-75251221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
210, 80
               

               
Conread position:
               
34-422
               

               
Cow position:
               
chr2:10712180-10711794 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 214
               

               
Conread position:
               
50-421
               

               
Cow position:
               
chr2:34565660-34565288 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 205
               

               
Conread position:
               
56-422
               

               
Cow position:
               
chr2:26868549-26868910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
116, 57
               

               
Conread position:
               
57-422
               

               
Cow position:
               
chr2:7901557-7901925 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 192
               

               
Conread position:
               
91-375
               

               
Cow position:
               
chr2:40245367-40245649 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 65
               

               
Conread position:
               
103-420
               

               
Cow position:
               
chr2:28792569-28792890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
96, 101
               

               
Conread position:
               
103-421
               

               
Cow position:
               
chr2:28643796-28643483 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
274, 139
               

               
Conread position:
               
108-420
               

               
Cow position:
               
chr2:53473830-53473517 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 17
               

               
Conread position:
               
1-364
               

               
Cow position:
               
chr20:4799913-4799554 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
109, 0
               

               
Conread position:
               
1-365
               

               
Cow position:
               
chr20:10102813-10102461 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
97, 25
               

               
Conread position:
               
1-422
               

               
Cow position:
               
chr20:5483924-5484346 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 36
               

               
Conread position:
               
1-422
               

               
Cow position:
               
chr20:18315847-18315437 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 23
               

               
Conread position:
               
2-330
               

               
Cow position:
               
chr20:35119058-35119389 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
111, 184
               

               
Conread position:
               
5-405
               

               
Cow position:
               
chr20:28160517-28160915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 182
               

               
Conread position:
               
5-407
               

               
Cow position:
               
chr20:21393309-21393706 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
285, 175
               

               
Conread position:
               
5-420
               

               
Cow position:
               
chr20:12439025-12438606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 135
               

               
Conread position:
               
5-420
               

               
Cow position:
               
chr20:15064501-15064921 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 245
               

               
Conread position:
               
5-421
               

               
Cow position:
               
chr20:23798619-23799038 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 11
               

               
Conread position:
               
5-422
               

               
Cow position:
               
chr20:5534678-5535094 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
194, 199
               

               
Conread position:
               
5-422
               

               
Cow position:
               
chr20:8313697-8313283 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
372, 239
               

               
Conread position:
               
5-422
               

               
Cow position:
               
chr20:13762642-13763060 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
204, 108
               

               
Conread position:
               
5-422
               

               
Cow position:
               
chr20:21914062-21914484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
106, 202
               

               
Conread position:
               
5-422
               

               
Cow position:
               
chr20:23469924-23469502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
95, 231
               

               
Conread position:
               
5-422
               

               
Cow position:
               
chr20:25851254-25850834 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 242
               

               
Conread position:
               
5-422
               

               
Cow position:
               
chr20:27868933-27869354 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 135
               

               
Conread position:
               
6-422
               

               
Cow position:
               
chr20:15098130-15097721 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 19
               

               
Conread position:
               
6-422
               

               
Cow position:
               
chr20:35119311-35119727 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
107, 180
               

               
Conread position:
               
8-420
               

               
Cow position:
               
chr20:28565861-28565441 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
103, 203
               

               
Conread position:
               
17-421
               

               
Cow position:
               
chr20:13665438-13665055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
96, 21
               

               
Conread position:
               
98-422
               

               
Cow position:
               
chr20:15291850-15292167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
101, 85
               

               
Conread position:
               
103-422
               

               
Cow position:
               
chr20:8004389-8004069 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
8, 142
               

               
Conread position:
               
141-422
               

               
Cow position:
               
chr20:15947518-15947221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
200, 102
               

               
Conread position:
               
1-391
               

               
Cow position:
               
chr21:358868-359261 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 23
               

               
Conread position:
               
1-422
               

               
Cow position:
               
chr21:34259361-34258954 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
376, 106
               

               
Conread position:
               
4-230
               

               
Cow position:
               
chr21:2501792-2502011 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
118, 0
               

               
Conread position:
               
5-203
               

               
Cow position:
               
chr21:40271958-40271765 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
5-314
               

               
Cow position:
               
chr21:1190897-1191214 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 208
               

               
Conread position:
               
5-387
               

               
Cow position:
               
chr21:3615149-3615534 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
104, 56
               

               
Conread position:
               
5-410
               

               
Cow position:
               
chr21:21947947-21947537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
8, 170
               

               
Conread position:
               
5-410
               

               
Cow position:
               
chr21:33251247-33251656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 202
               

               
Conread position:
               
5-420
               

               
Cow position:
               
chr21:10566534-10566947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
194, 29
               

               
Conread position:
               
5-420
               

               
Cow position:
               
chr21:10849935-10850354 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 202
               

               
Conread position:
               
5-422
               

               
Cow position:
               
chr21:145775-146199 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 201
               

               
Conread position:
               
5-422
               

               
Cow position:
               
chr21:2883879-2883472 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
204, 106
               

               
Conread position:
               
5-422
               

               
Cow position:
               
chr21:3426339-3426761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 113
               

               
Conread position:
               
5-422
               

               
Cow position:
               
chr21:30600060-30599648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
372, 112
               

               
Conread position:
               
5-422
               

               
Cow position:
               
chr21:48115963-48116377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 136
               

               
Conread position:
               
8-420
               

               
Cow position:
               
chr21:7267678-7267271 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
215, 129
               

               
Conread position:
               
8-421
               

               
Cow position:
               
chr21:46915445-46915863 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 0
               

               
Conread position:
               
9-420
               

               
Cow position:
               
chr21:4183397-4183794 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
278, 115
               

               
Conread position:
               
10-422
               

               
Cow position:
               
chr21:31559795-31559380 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 19
               

               
Conread position:
               
12-422
               

               
Cow position:
               
chr21:4222824-4222411 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
101, 22
               

               
Conread position:
               
20-256
               

               
Cow position:
               
chr21:27623-27851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
22, 121
               

               
Conread position:
               
22-422
               

               
Cow position:
               
chr21:35596242-35596644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 40
               

               
Conread position:
               
103-420
               

               
Cow position:
               
chr21:23811832-23812149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
274, 141
               

               
Conread position:
               
1-422
               

               
Cow position:
               
chr22:1319074-1319500 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 247
               

               
Conread position:
               
1-422
               

               
Cow position:
               
chr22:7277201-7277624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
106, 237
               

               
Conread position:
               
2-420
               

               
Cow position:
               
chr22:327469-327058 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 116
               

               
Conread position:
               
4-419
               

               
Cow position:
               
chr22:5672420-5672837 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
94, 241
               

               
Conread position:
               
4-421
               

               
Cow position:
               
chr22:46636014-46635612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
109, 45
               

               
Conread position:
               
5-198
               

               
Cow position:
               
chr22:44456996-44457194 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
108, 151
               

               
Conread position:
               
5-422
               

               
Cow position:
               
chr22:8136509-8136101 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
104, 28
               

               
Conread position:
               
5-422
               

               
Cow position:
               
chr22:19144015-19143596 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 65
               

               
Conread position:
               
5-422
               

               
Cow position:
               
chr22:31313027-31313444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
201, 123
               

               
Conread position:
               
5-422
               

               
Cow position:
               
chr22:31335350-31334932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 126
               

               
Conread position:
               
5-422
               

               
Cow position:
               
chr22:34168014-34168435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 202
               

               
Conread position:
               
5-422
               

               
Cow position:
               
chr22:36736456-36736861 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
372, 37
               

               
Conread position:
               
5-422
               

               
Cow position:
               
chr22:36861848-36861427 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
101, 202
               

               
Conread position:
               
5-422
               

               
Cow position:
               
chr22:39469835-39469420 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
110, 125
               

               
Conread position:
               
5-422
               

               
Cow position:
               
chr22:44933662-44934082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 202
               

               
Conread position:
               
6-279
               

               
Cow position:
               
chr22:118132-117857 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
107, 241
               

               
Conread position:
               
7-402
               

               
Cow position:
               
chr22:1321300-1321690 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
110, 63
               

               
Conread position:
               
7-422
               

               
Cow position:
               
chr22:46853034-46853446 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 45
               

               
Conread position:
               
8-422
               

               
Cow position:
               
chr22:42990857-42991275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 199
               

               
Conread position:
               
9-242
               

               
Cow position:
               
chr22:44395468-44395703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
104, 77
               

               
Conread position:
               
9-420
               

               
Cow position:
               
chr22:17329053-17328638 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
104, 198
               

               
Conread position:
               
11-422
               

               
Cow position:
               
chr22:1270808-1270428 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
368, 18
               

               
Conread position:
               
20-422
               

               
Cow position:
               
chr22:6503973-6503574 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 230
               

               
Conread position:
               
30-408
               

               
Cow position:
               
chr22:45880429-45880023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
12, 245
               

               
Conread position:
               
48-421
               

               
Cow position:
               
chr22:36183484-36183860 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 32
               

               
Conread position:
               
62-422
               

               
Cow position:
               
chr22:27386692-27386328 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 145
               

               
Conread position:
               
94-422
               

               
Cow position:
               
chr22:13917278-13917606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
196, 22
               

               
Conread position:
               
102-422
               

               
Cow position:
               
chr22:15314166-15313850 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
247, 98
               

               
Conread position:
               
111-422
               

               
Cow position:
               
chr22:525884-525592 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
5, 27
               

               
Conread position:
               
150-421
               

               
Cow position:
               
chr22:46547834-46547562 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
227, 94
               

               
Conread position:
               
1-420
               

               
Cow position:
               
chr23:5779407-5778986 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 207
               

               
Conread position:
               
1-422
               

               
Cow position:
               
chr23:4276637-4277058 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
376, 98
               

               
Conread position:
               
1-422
               

               
Cow position:
               
chr23:5875093-5874671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
151, 111
               

               
Conread position:
               
5-236
               

               
Cow position:
               
chr23:2716034-2716263 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
108, 188
               

               
Conread position:
               
5-288
               

               
Cow position:
               
chr23:8980806-8980525 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 0
               

               
Conread position:
               
5-413
               

               
Cow position:
               
chr23:967665-967251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 200
               

               
Conread position:
               
5-422
               

               
Cow position:
               
chr23:3882012-3881602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
194, 108
               

               
Conread position:
               
5-422
               

               
Cow position:
               
chr23:4640942-4640521 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 202
               

               
Conread position:
               
5-422
               

               
Cow position:
               
chr23:4815757-4816178 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
101, 56
               

               
Conread position:
               
5-422
               

               
Cow position:
               
chr23:15525296-15525713 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
194, 178
               

               
Conread position:
               
5-422
               

               
Cow position:
               
chr23:30636619-30636199 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 85
               

               
Conread position:
               
5-422
               

               
Cow position:
               
chr23:36031687-36031270 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 196
               

               
Conread position:
               
6-227
               

               
Cow position:
               
chr23:31595493-31595272 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
107, 28
               

               
Conread position:
               
9-422
               

               
Cow position:
               
chr23:15220211-15219789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
97, 199
               

               
Conread position:
               
10-213
               

               
Cow position:
               
chr23:1141249-1141444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
10-422
               

               
Cow position:
               
chr23:27399191-27399607 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
103, 184
               

               
Conread position:
               
11-422
               

               
Cow position:
               
chr23:15176763-15177177 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
102, 196
               

               
Conread position:
               
17-422
               

               
Cow position:
               
chr23:3013329-3013749 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
84, 17
               

               
Conread position:
               
19-422
               

               
Cow position:
               
chr23:16617154-16616746 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
94, 125
               

               
Conread position:
               
20-422
               

               
Cow position:
               
chr23:2027418-2027016 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
179, 184
               

               
Conread position:
               
23-422
               

               
Cow position:
               
chr23:11778186-11778573 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 180
               

               
Conread position:
               
44-422
               

               
Cow position:
               
chr23:4888402-4888778 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 163
               

               
Conread position:
               
94-422
               

               
Cow position:
               
chr23:20156459-20156114 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 110
               

               
Conread position:
               
183-422
               

               
Cow position:
               
chr23:31591945-31591700 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
128, 61
               

               
Conread position:
               
1-182
               

               
Cow position:
               
chr24:12207906-12208087 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
13, 38
               

               
Conread position:
               
1-420
               

               
Cow position:
               
chr24:35838867-35838429 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 252
               

               
Conread position:
               
1-422
               

               
Cow position:
               
chr24:14384850-14384425 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 133
               

               
Conread position:
               
4-131
               

               
Cow position:
               
chr24:37216494-37216620 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
128
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
116, 0
               

               
Conread position:
               
5-339
               

               
Cow position:
               
chr24:13531766-13531432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 153
               

               
Conread position:
               
5-421
               

               
Cow position:
               
chr24:12085968-12086386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 130
               

               
Conread position:
               
13-421
               

               
Cow position:
               
chr24:36560302-36559899 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
103, 29
               

               
Conread position:
               
69-422
               

               
Cow position:
               
chr24:14584927-14585265 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 20
               

               
Conread position:
               
89-422
               

               
Cow position:
               
chr24:148763-148430 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 94
               

               
Conread position:
               
89-422
               

               
Cow position:
               
chr24:22951988-22952325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 118
               

               
Conread position:
               
91-420
               

               
Cow position:
               
chr24:9092419-9092095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 155
               

               
Conread position:
               
103-422
               

               
Cow position:
               
chr24:12335923-12335585 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
141, 97
               

               
Conread position:
               
1-422
               

               
Cow position:
               
chr25:11375625-11375203 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
112, 244
               

               
Conread position:
               
2-415
               

               
Cow position:
               
chr25:18092742-18093157 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
107, 14
               

               
Conread position:
               
4-419
               

               
Cow position:
               
chr25:18276100-18275691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
101, 243
               

               
Conread position:
               
5-329
               

               
Cow position:
               
chr25:34347266-34346940 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
103, 60
               

               
Conread position:
               
5-397
               

               
Cow position:
               
chr25:26866948-26867362 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 315
               

               
Conread position:
               
5-422
               

               
Cow position:
               
chr25:13780761-13781175 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
194, 108
               

               
Conread position:
               
5-422
               

               
Cow position:
               
chr25:14015902-14016310 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
372, 96
               

               
Conread position:
               
5-422
               

               
Cow position:
               
chr25:18890290-18889871 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 202
               

               
Conread position:
               
5-422
               

               
Cow position:
               
chr25:20629302-20629716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 203
               

               
Conread position:
               
5-422
               

               
Cow position:
               
chr25:22147220-22147640 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 77
               

               
Conread position:
               
5-422
               

               
Cow position:
               
chr25:25506375-25506795 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
104, 133
               

               
Conread position:
               
5-422
               

               
Cow position:
               
chr25:26278991-26279402 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 159
               

               
Conread position:
               
13-422
               

               
Cow position:
               
chr25:36240279-36240701 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 234
               

               
Conread position:
               
24-422
               

               
Cow position:
               
chr25:18060842-18060455 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 194
               

               
Conread position:
               
27-422
               

               
Cow position:
               
chr25:17468945-17468553 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 7
               

               
Conread position:
               
27-422
               

               
Cow position:
               
chr25:18027882-18027480 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 223
               

               
Conread position:
               
127-422
               

               
Cow position:
               
chr25:12942849-12942555 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 7
               

               
Conread position:
               
1-421
               

               
Cow position:
               
chr26:12574654-12574244 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 115
               

               
Conread position:
               
1-422
               

               
Cow position:
               
chr26:19351771-19351348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
112, 211
               

               
Conread position:
               
5-313
               

               
Cow position:
               
chr26:6850428-6850119 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 202
               

               
Conread position:
               
5-375
               

               
Cow position:
               
chr26:11537087-11536719 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 116
               

               
Conread position:
               
5-420
               

               
Cow position:
               
chr26:5674913-5675323 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 142
               

               
Conread position:
               
5-422
               

               
Cow position:
               
chr26:9563612-9563192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 242
               

               
Conread position:
               
5-422
               

               
Cow position:
               
chr26:17397185-17396765 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 203
               

               
Conread position:
               
9-422
               

               
Cow position:
               
chr26:3691558-3691965 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 7
               

               
Conread position:
               
10-422
               

               
Cow position:
               
chr26:20254821-20255220 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 52
               

               
Conread position:
               
35-420
               

               
Cow position:
               
chr26:30589592-30589213 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
342, 15
               

               
Conread position:
               
103-422
               

               
Cow position:
               
chr26:12656142-12656442 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
124, 23
               

               
Conread position:
               
5-420
               

               
Cow position:
               
chr27:14460773-14460355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 78
               

               
Conread position:
               
5-422
               

               
Cow position:
               
chr27:1209035-1209454 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 41
               

               
Conread position:
               
5-422
               

               
Cow position:
               
chr27:26324497-26324918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 202
               

               
Conread position:
               
5-422
               

               
Cow position:
               
chr27:27662577-27663003 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 209
               

               
Conread position:
               
7-421
               

               
Cow position:
               
chr27:16439014-16439430 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 106
               

               
Conread position:
               
13-422
               

               
Cow position:
               
chr27:9993511-9993102 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 59
               

               
Conread position:
               
156-303
               

               
Cow position:
               
chr27:8561425-8561574 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
19, 47
               

               
Conread position:
               
1-422
               

               
Cow position:
               
chr28:9953858-9954280 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
110, 190
               

               
Conread position:
               
4-422
               

               
Cow position:
               
chr28:5812435-5812839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 200
               

               
Conread position:
               
4-422
               

               
Cow position:
               
chr28:8721717-8721300 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 150
               

               
Conread position:
               
5-199
               

               
Cow position:
               
chr28:13522454-13522651 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
102, 0
               

               
Conread position:
               
5-269
               

               
Cow position:
               
chr28:1168437-1168174 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 165
               

               
Conread position:
               
5-269
               

               
Cow position:
               
chr28:34593570-34593832 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 132
               

               
Conread position:
               
5-421
               

               
Cow position:
               
chr28:14705944-14705525 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 201
               

               
Conread position:
               
5-422
               

               
Cow position:
               
chr28:782125-782542 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 138
               

               
Conread position:
               
5-422
               

               
Cow position:
               
chr28:1815140-1814720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
109, 90
               

               
Conread position:
               
5-422
               

               
Cow position:
               
chr28:7001715-7002137 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
106, 202
               

               
Conread position:
               
5-422
               

               
Cow position:
               
chr28:8378293-8378716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 196
               

               
Conread position:
               
5-422
               

               
Cow position:
               
chr28:10582258-10581840 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 123
               

               
Conread position:
               
5-422
               

               
Cow position:
               
chr28:13459698-13460117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 198
               

               
Conread position:
               
5-422
               

               
Cow position:
               
chr28:17667785-17667366 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 149
               

               
Conread position:
               
5-422
               

               
Cow position:
               
chr28:22261424-22261003 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 198
               

               
Conread position:
               
5-422
               

               
Cow position:
               
chr28:26426545-26426130 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 90
               

               
Conread position:
               
6-422
               

               
Cow position:
               
chr28:9155556-9155132 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 64
               

               
Conread position:
               
8-312
               

               
Cow position:
               
chr28:29819300-29819604 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
106, 195
               

               
Conread position:
               
8-415
               

               
Cow position:
               
chr28:5565591-5566003 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 200
               

               
Conread position:
               
9-330
               

               
Cow position:
               
chr28:17330792-17330473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 79
               

               
Conread position:
               
9-422
               

               
Cow position:
               
chr28:18520730-18520316 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
101, 238
               

               
Conread position:
               
11-422
               

               
Cow position:
               
chr28:17388214-17388629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
102, 230
               

               
Conread position:
               
16-240
               

               
Cow position:
               
chr28:5796557-5796780 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
13, 86
               

               
Conread position:
               
16-422
               

               
Cow position:
               
chr28:4381083-4380697 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 114
               

               
Conread position:
               
21-422
               

               
Cow position:
               
chr28:7901099-7901502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
112, 7
               

               
Conread position:
               
39-422
               

               
Cow position:
               
chr28:1504615-1504999 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 148
               

               
Conread position:
               
46-268
               

               
Cow position:
               
chr28:5752109-5751884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
67, 162
               

               
Conread position:
               
49-422
               

               
Cow position:
               
chr28:15378221-15377844 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 198
               

               
Conread position:
               
50-418
               

               
Cow position:
               
chr28:24652063-24652427 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 197
               

               
Conread position:
               
50-422
               

               
Cow position:
               
chr28:3193019-3192644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 157
               

               
Conread position:
               
51-293
               

               
Cow position:
               
chr28:2989909-2989672 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
61, 110
               

               
Conread position:
               
89-422
               

               
Cow position:
               
chr28:33252131-33252461 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
106, 115
               

               
Conread position:
               
102-422
               

               
Cow position:
               
chr28:12410383-12410076 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
103-422
               

               
Cow position:
               
chr28:5114972-5114664 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
106, 97
               

               
Conread position:
               
120-422
               

               
Cow position:
               
chr28:7740340-7740633 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 26
               

               
Conread position:
               
146-421
               

               
Cow position:
               
chr28:7790427-7790140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
21, 56
               

               
Conread position:
               
1-422
               

               
Cow position:
               
chr29:19623555-19623134 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
198, 203
               

               
Conread position:
               
1-422
               

               
Cow position:
               
chr29:19652797-19653221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
103, 206
               

               
Conread position:
               
4-421
               

               
Cow position:
               
chr29:2750691-2750300 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
373, 40
               

               
Conread position:
               
5-405
               

               
Cow position:
               
chr29:2841672-2841273 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
190, 108
               

               
Conread position:
               
5-422
               

               
Cow position:
               
chr29:48783-48365 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 202
               

               
Conread position:
               
5-422
               

               
Cow position:
               
chr29:2099536-2099958 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 203
               

               
Conread position:
               
5-422
               

               
Cow position:
               
chr29:2689598-2690015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
172, 205
               

               
Conread position:
               
5-422
               

               
Cow position:
               
chr29:6266799-6266388 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 50
               

               
Conread position:
               
5-422
               

               
Cow position:
               
chr29:7431523-7431102 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 202
               

               
Conread position:
               
5-422
               

               
Cow position:
               
chr29:10648552-10648138 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
193, 178
               

               
Conread position:
               
5-422
               

               
Cow position:
               
chr29:10824264-10823856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
125, 22
               

               
Conread position:
               
5-422
               

               
Cow position:
               
chr29:23975525-23975953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 206
               

               
Conread position:
               
5-422
               

               
Cow position:
               
chr29:25932851-25932431 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
106, 201
               

               
Conread position:
               
5-422
               

               
Cow position:
               
chr29:26165129-26164709 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 241
               

               
Conread position:
               
5-422
               

               
Cow position:
               
chr29:27041067-27040656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
295, 108
               

               
Conread position:
               
5-422
               

               
Cow position:
               
chr29:32539504-32539923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 19
               

               
Conread position:
               
5-422
               

               
Cow position:
               
chr29:34800113-34799695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
190, 56
               

               
Conread position:
               
5-422
               

               
Cow position:
               
chr29:38226687-38227093 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 81
               

               
Conread position:
               
5-422
               

               
Cow position:
               
chr29:45459412-45459826 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
194, 185
               

               
Conread position:
               
6-420
               

               
Cow position:
               
chr29:4635267-4634864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
18, 29
               

               
Conread position:
               
6-422
               

               
Cow position:
               
chr29:21543678-21543256 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
92, 23
               

               
Conread position:
               
9-422
               

               
Cow position:
               
chr29:39080009-39079599 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
104, 198
               

               
Conread position:
               
9-422
               

               
Cow position:
               
chr29:40503282-40502867 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
102, 238
               

               
Conread position:
               
9-422
               

               
Cow position:
               
chr29:43322256-43322673 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 198
               

               
Conread position:
               
10-413
               

               
Cow position:
               
chr29:21246266-21246674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 198
               

               
Conread position:
               
10-421
               

               
Cow position:
               
chr29:7840497-7840909 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
112, 15
               

               
Conread position:
               
10-421
               

               
Cow position:
               
chr29:28060968-28060552 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
103, 0
               

               
Conread position:
               
11-405
               

               
Cow position:
               
chr29:21427355-21426962 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
96, 17
               

               
Conread position:
               
13-421
               

               
Cow position:
               
chr29:16022236-16022642 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 37
               

               
Conread position:
               
28-416
               

               
Cow position:
               
chr29:35196392-35196774 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 86
               

               
Conread position:
               
37-181
               

               
Cow position:
               
chr29:42801912-42802055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
105, 8
               

               
Conread position:
               
37-243
               

               
Cow position:
               
chr29:42650052-42650258 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
105, 8
               

               
Conread position:
               
49-295
               

               
Cow position:
               
chr29:17662658-17662911 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
60, 200
               

               
Conread position:
               
156-395
               

               
Cow position:
               
chr29:5983333-5983094 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
163, 45
               

               
Conread position:
               
162-422
               

               
Cow position:
               
chr29:14585780-14586035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 42
               

               
Conread position:
               
1-339
               

               
Cow position:
               
chr3:39326298-39326630 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
129, 104
               

               
Conread position:
               
1-422
               

               
Cow position:
               
chr3:3054219-3054629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
381, 179
               

               
Conread position:
               
1-422
               

               
Cow position:
               
chr3:5047577-5047153 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 34
               

               
Conread position:
               
1-422
               

               
Cow position:
               
chr3:5954580-5954155 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
112, 246
               

               
Conread position:
               
3-422
               

               
Cow position:
               
chr3:31354644-31354234 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
374, 31
               

               
Conread position:
               
4-419
               

               
Cow position:
               
chr3:14634489-14634084 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
372, 97
               

               
Conread position:
               
4-422
               

               
Cow position:
               
chr3:3979998-3980421 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 114
               

               
Conread position:
               
4-422
               

               
Cow position:
               
chr3:64358554-64358139 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
136, 82
               

               
Conread position:
               
5-241
               

               
Cow position:
               
chr3:49545562-49545328 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
195, 0
               

               
Conread position:
               
5-243
               

               
Cow position:
               
chr3:49677373-49677610 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
100, 47
               

               
Conread position:
               
5-289
               

               
Cow position:
               
chr3:56650654-56650372 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 95
               

               
Conread position:
               
5-353
               

               
Cow position:
               
chr3:47273355-47273033 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
194, 121
               

               
Conread position:
               
5-408
               

               
Cow position:
               
chr3:69933008-69933411 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 181
               

               
Conread position:
               
5-420
               

               
Cow position:
               
chr3:57485111-57484700 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 11
               

               
Conread position:
               
5-421
               

               
Cow position:
               
chr3:42630623-42631044 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 238
               

               
Conread position:
               
5-422
               

               
Cow position:
               
chr3:594200-594606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
194, 103
               

               
Conread position:
               
5-422
               

               
Cow position:
               
chr3:2711347-2710930 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 132
               

               
Conread position:
               
5-422
               

               
Cow position:
               
chr3:5830018-5829597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
104, 242
               

               
Conread position:
               
5-422
               

               
Cow position:
               
chr3:5883151-5883570 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 202
               

               
Conread position:
               
5-422
               

               
Cow position:
               
chr3:9716422-9716845 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 244
               

               
Conread position:
               
5-422
               

               
Cow position:
               
chr3:10239263-10239680 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
194, 135
               

               
Conread position:
               
5-422
               

               
Cow position:
               
chr3:18542797-18542377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 198
               

               
Conread position:
               
5-422
               

               
Cow position:
               
chr3:18811114-18811534 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 94
               

               
Conread position:
               
5-422
               

               
Cow position:
               
chr3:19757349-19756928 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 203
               

               
Conread position:
               
5-422
               

               
Cow position:
               
chr3:21183071-21182653 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
194, 199
               

               
Conread position:
               
5-422
               

               
Cow position:
               
chr3:23291794-23291376 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
101, 177
               

               
Conread position:
               
5-422
               

               
Cow position:
               
chr3:31898361-31897946 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 19
               

               
Conread position:
               
5-422
               

               
Cow position:
               
chr3:34031286-34030868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 180
               

               
Conread position:
               
5-422
               

               
Cow position:
               
chr3:36882301-36881891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
372, 178
               

               
Conread position:
               
5-422
               

               
Cow position:
               
chr3:40822999-40823418 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 198
               

               
Conread position:
               
5-422
               

               
Cow position:
               
chr3:42580354-42579936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
104, 158
               

               
Conread position:
               
5-422
               

               
Cow position:
               
chr3:48061211-48060801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 27
               

               
Conread position:
               
5-422
               

               
Cow position:
               
chr3:59860976-59861397 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
96, 202
               

               
Conread position:
               
5-422
               

               
Cow position:
               
chr3:64017753-64017333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 198
               

               
Conread position:
               
5-422
               

               
Cow position:
               
chr3:70084032-70083621 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 71
               

               
Conread position:
               
5-422
               

               
Cow position:
               
chr3:72629682-72630100 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
194, 199
               

               
Conread position:
               
5-422
               

               
Cow position:
               
chr3:78027800-78027379 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
101, 202
               

               
Conread position:
               
6-242
               

               
Cow position:
               
chr3:52865133-52864899 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
102, 10
               

               
Conread position:
               
6-422
               

               
Cow position:
               
chr3:19943680-19944088 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 42
               

               
Conread position:
               
8-420
               

               
Cow position:
               
chr3:50914919-50915333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
92, 26
               

               
Conread position:
               
9-422
               

               
Cow position:
               
chr3:6685074-6685492 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 187
               

               
Conread position:
               
16-422
               

               
Cow position:
               
chr3:48231359-48230980 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
17-333
               

               
Cow position:
               
chr3:17951983-17952304 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 231
               

               
Conread position:
               
20-420
               

               
Cow position:
               
chr3:34396433-34396052 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
16, 69
               

               
Conread position:
               
28-293
               

               
Cow position:
               
chr3:2909455-2909194 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
85, 20
               

               
Conread position:
               
28-420
               

               
Cow position:
               
chr3:75041529-75041139 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
171, 85
               

               
Conread position:
               
30-422
               

               
Cow position:
               
chr3:18463940-18463556 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
347, 65
               

               
Conread position:
               
47-410
               

               
Cow position:
               
chr3:3806012-3806358 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
330, 66
               

               
Conread position:
               
51-421
               

               
Cow position:
               
chr3:66638396-66638770 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 196
               

               
Conread position:
               
76-316
               

               
Cow position:
               
chr3:57900895-57901139 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
11, 172
               

               
Conread position:
               
130-422
               

               
Cow position:
               
chr3:53515358-53515644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 11
               

               
Conread position:
               
154-422
               

               
Cow position:
               
chr3:19802422-19802690 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
223, 90
               

               
Conread position:
               
1-405
               

               
Cow position:
               
chr4:46663615-46664011 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
112, 174
               

               
Conread position:
               
1-421
               

               
Cow position:
               
chr4:21338569-21338169 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
106, 60
               

               
Conread position:
               
5-361
               

               
Cow position:
               
chr4:1050205-1049851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
101, 202
               

               
Conread position:
               
5-391
               

               
Cow position:
               
chr4:43320221-43319831 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 202
               

               
Conread position:
               
5-405
               

               
Cow position:
               
chr4:36895789-36896192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
107, 202
               

               
Conread position:
               
5-407
               

               
Cow position:
               
chr4:31668732-31669129 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
95, 19
               

               
Conread position:
               
5-420
               

               
Cow position:
               
chr4:16359307-16359717 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
372, 56
               

               
Conread position:
               
5-421
               

               
Cow position:
               
chr4:66925420-66925834 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 73
               

               
Conread position:
               
5-422
               

               
Cow position:
               
chr4:355330-355746 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
372, 19
               

               
Conread position:
               
5-422
               

               
Cow position:
               
chr4:1464504-1464089 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
228, 11
               

               
Conread position:
               
5-422
               

               
Cow position:
               
chr4:3961010-3961427 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
194, 199
               

               
Conread position:
               
5-422
               

               
Cow position:
               
chr4:4905568-4905982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 199
               

               
Conread position:
               
5-422
               

               
Cow position:
               
chr4:6490931-6490529 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 198
               

               
Conread position:
               
5-422
               

               
Cow position:
               
chr4:13491991-13492412 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 202
               

               
Conread position:
               
5-422
               

               
Cow position:
               
chr4:18516311-18516732 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 202
               

               
Conread position:
               
5-422
               

               
Cow position:
               
chr4:24445784-24445365 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
53, 67
               

               
Conread position:
               
5-422
               

               
Cow position:
               
chr4:29532299-29531879 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 202
               

               
Conread position:
               
5-422
               

               
Cow position:
               
chr4:41330855-41331273 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 203
               

               
Conread position:
               
5-422
               

               
Cow position:
               
chr4:43880525-43880945 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
106, 32
               

               
Conread position:
               
5-422
               

               
Cow position:
               
chr4:45049880-45049462 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
165, 108
               

               
Conread position:
               
9-422
               

               
Cow position:
               
chr4:28830458-28830865 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 50
               

               
Conread position:
               
9-422
               

               
Cow position:
               
chr4:33493230-33493644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 199
               

               
Conread position:
               
10-421
               

               
Cow position:
               
chr4:32211587-32212002 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
103, 237
               

               
Conread position:
               
13-422
               

               
Cow position:
               
chr4:25600187-25599783 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 25
               

               
Conread position:
               
16-289
               

               
Cow position:
               
chr4:10408204-10408482 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 99
               

               
Conread position:
               
34-266
               

               
Cow position:
               
chr4:54190306-54190533 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
38-361
               

               
Cow position:
               
chr4:11383859-11384177 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
75, 165
               

               
Conread position:
               
39-410
               

               
Cow position:
               
chr4:1371561-1371180 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
219, 74
               

               
Conread position:
               
51-285
               

               
Cow position:
               
chr4:12608040-12607808 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
62, 16
               

               
Conread position:
               
67-422
               

               
Cow position:
               
chr4:26887364-26887027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 11
               

               
Conread position:
               
103-421
               

               
Cow position:
               
chr4:33073581-33073275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
94, 101
               

               
Conread position:
               
163-421
               

               
Cow position:
               
chr4:41119590-41119848 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 9
               

               
Conread position:
               
1-203
               

               
Cow position:
               
chr5:59282268-59282472 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
112, 202
               

               
Conread position:
               
1-419
               

               
Cow position:
               
chr5:24329803-24330201 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 246
               

               
Conread position:
               
4-422
               

               
Cow position:
               
chr5:49593950-49593525 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
103, 235
               

               
Conread position:
               
5-276
               

               
Cow position:
               
chr5:29123286-29123019 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
107, 167
               

               
Conread position:
               
5-374
               

               
Cow position:
               
chr5:54793108-54792732 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 202
               

               
Conread position:
               
5-393
               

               
Cow position:
               
chr5:34696094-34696484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 54
               

               
Conread position:
               
5-418
               

               
Cow position:
               
chr5:28031003-28031403 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 33
               

               
Conread position:
               
5-420
               

               
Cow position:
               
chr5:24098157-24098577 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 203
               

               
Conread position:
               
5-422
               

               
Cow position:
               
chr5:2430622-2430202 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 71
               

               
Conread position:
               
5-422
               

               
Cow position:
               
chr5:2913960-2914381 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 202
               

               
Conread position:
               
5-422
               

               
Cow position:
               
chr5:3785321-3785720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
194, 178
               

               
Conread position:
               
5-422
               

               
Cow position:
               
chr5:4068500-4068920 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 174
               

               
Conread position:
               
5-422
               

               
Cow position:
               
chr5:6158684-6158267 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
107, 21
               

               
Conread position:
               
5-422
               

               
Cow position:
               
chr5:7273376-7273782 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
372, 44
               

               
Conread position:
               
5-422
               

               
Cow position:
               
chr5:29008871-29009285 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
104, 29
               

               
Conread position:
               
5-422
               

               
Cow position:
               
chr5:30578832-30579252 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
106, 123
               

               
Conread position:
               
5-422
               

               
Cow position:
               
chr5:37731855-37732276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
103, 202
               

               
Conread position:
               
5-422
               

               
Cow position:
               
chr5:46659238-46659645 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
102, 18
               

               
Conread position:
               
5-422
               

               
Cow position:
               
chr5:46739075-46738655 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 202
               

               
Conread position:
               
5-422
               

               
Cow position:
               
chr5:57483037-57482616 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 242
               

               
Conread position:
               
5-422
               

               
Cow position:
               
chr5:58061313-58060910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
226, 29
               

               
Conread position:
               
5-422
               

               
Cow position:
               
chr5:64782507-64782088 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 198
               

               
Conread position:
               
6-422
               

               
Cow position:
               
chr5:1342285-1341863 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
107, 203
               

               
Conread position:
               
6-422
               

               
Cow position:
               
chr5:45699791-45700196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
103, 161
               

               
Conread position:
               
7-337
               

               
Cow position:
               
chr5:27569668-27569997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
106, 20
               

               
Conread position:
               
7-422
               

               
Cow position:
               
chr5:49181793-49182199 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
176, 106
               

               
Conread position:
               
8-327
               

               
Cow position:
               
chr5:4384742-4385060 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 129
               

               
Conread position:
               
8-422
               

               
Cow position:
               
chr5:26769333-26769740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
101, 8
               

               
Conread position:
               
8-422
               

               
Cow position:
               
chr5:48809201-48808785 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 197
               

               
Conread position:
               
9-194
               

               
Cow position:
               
chr5:12185174-12185362 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
104, 0
               

               
Conread position:
               
9-408
               

               
Cow position:
               
chr5:46005871-46005460 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
6, 135
               

               
Conread position:
               
9-422
               

               
Cow position:
               
chr5:3504733-3504320 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
104, 198
               

               
Conread position:
               
11-422
               

               
Cow position:
               
chr5:32945396-32945804 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
96, 175
               

               
Conread position:
               
12-181
               

               
Cow position:
               
chr5:6519412-6519575 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
6, 0
               

               
Conread position:
               
13-422
               

               
Cow position:
               
chr5:41551407-41550997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
96, 192
               

               
Conread position:
               
16-405
               

               
Cow position:
               
chr5:61273647-61273269 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
361, 93
               

               
Conread position:
               
16-422
               

               
Cow position:
               
chr5:28006739-28007130 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 60
               

               
Conread position:
               
103-331
               

               
Cow position:
               
chr5:18653618-18653843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
137, 0
               

               
Conread position:
               
1-287
               

               
Cow position:
               
chr6:6476805-6476519 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
112, 48
               

               
Conread position:
               
1-422
               

               
Cow position:
               
chr6:11278048-11277623 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
194, 113
               

               
Conread position:
               
1-422
               

               
Cow position:
               
chr6:38231927-38232349 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 23
               

               
Conread position:
               
2-242
               

               
Cow position:
               
chr6:12093206-12092971 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
2-422
               

               
Cow position:
               
chr6:42723271-42722855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
103, 65
               

               
Conread position:
               
5-250
               

               
Cow position:
               
chr6:64713200-64713441 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
99, 132
               

               
Conread position:
               
5-250
               

               
Cow position:
               
chr6:64714767-64715015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
99, 202
               

               
Conread position:
               
5-287
               

               
Cow position:
               
chr6:21686547-21686823 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
135, 0
               

               
Conread position:
               
5-294
               

               
Cow position:
               
chr6:47043780-47043489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 202
               

               
Conread position:
               
5-304
               

               
Cow position:
               
chr6:39437295-39437593 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
194, 199
               

               
Conread position:
               
5-357
               

               
Cow position:
               
chr6:1823594-1823245 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
194, 11
               

               
Conread position:
               
5-403
               

               
Cow position:
               
chr6:50497801-50497405 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 62
               

               
Conread position:
               
5-405
               

               
Cow position:
               
chr6:17045716-17046114 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
121, 130
               

               
Conread position:
               
5-407
               

               
Cow position:
               
chr6:8201384-8201788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
103, 201
               

               
Conread position:
               
5-410
               

               
Cow position:
               
chr6:30275531-30275118 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 206
               

               
Conread position:
               
5-420
               

               
Cow position:
               
chr6:28274640-28275052 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
194, 87
               

               
Conread position:
               
5-421
               

               
Cow position:
               
chr6:913284-913713 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
121, 11
               

               
Conread position:
               
5-421
               

               
Cow position:
               
chr6:3889835-3889408 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 36
               

               
Conread position:
               
5-422
               

               
Cow position:
               
chr6:701605-702027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 205
               

               
Conread position:
               
5-422
               

               
Cow position:
               
chr6:3278299-3277878 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 202
               

               
Conread position:
               
5-422
               

               
Cow position:
               
chr6:5951585-5951174 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
106, 202
               

               
Conread position:
               
5-422
               

               
Cow position:
               
chr6:10558989-10558588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
336, 29
               

               
Conread position:
               
5-422
               

               
Cow position:
               
chr6:15141523-15141108 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
110, 201
               

               
Conread position:
               
5-422
               

               
Cow position:
               
chr6:15280891-15280480 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 173
               

               
Conread position:
               
5-422
               

               
Cow position:
               
chr6:21971325-21971758 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 202
               

               
Conread position:
               
5-422
               

               
Cow position:
               
chr6:36525694-36526115 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 198
               

               
Conread position:
               
5-422
               

               
Cow position:
               
chr6:55544675-55544255 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 202
               

               
Conread position:
               
5-422
               

               
Cow position:
               
chr6:65841241-65841656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 25
               

               
Conread position:
               
5-422
               

               
Cow position:
               
chr6:68362663-68362250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
6-421
               

               
Cow position:
               
chr6:42927033-42927454 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 191
               

               
Conread position:
               
8-405
               

               
Cow position:
               
chr6:27530344-27529948 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
191, 126
               

               
Conread position:
               
8-421
               

               
Cow position:
               
chr6:44525098-44524690 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
12, 157
               

               
Conread position:
               
8-422
               

               
Cow position:
               
chr6:65927595-65928008 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
215, 8
               

               
Conread position:
               
9-413
               

               
Cow position:
               
chr6:34893354-34892947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
104, 198
               

               
Conread position:
               
9-422
               

               
Cow position:
               
chr6:29311151-29311563 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
190, 86
               

               
Conread position:
               
9-422
               

               
Cow position:
               
chr6:35877061-35876646 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
115, 104
               

               
Conread position:
               
9-422
               

               
Cow position:
               
chr6:40554929-40554522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 90
               

               
Conread position:
               
10-421
               

               
Cow position:
               
chr6:27169233-27169648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
101, 226
               

               
Conread position:
               
11-422
               

               
Cow position:
               
chr6:8761643-8761232 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 196
               

               
Conread position:
               
13-422
               

               
Cow position:
               
chr6:3488742-3488328 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 33
               

               
Conread position:
               
16-311
               

               
Cow position:
               
chr6:65909089-65909383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 213
               

               
Conread position:
               
60-421
               

               
Cow position:
               
chr6:13317777-13317418 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 185
               

               
Conread position:
               
94-422
               

               
Cow position:
               
chr6:13276543-13276872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 153
               

               
Conread position:
               
102-422
               

               
Cow position:
               
chr6:33459615-33459935 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 150
               

               
Conread position:
               
1-421
               

               
Cow position:
               
chr7:1449232-1449645 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
376, 100
               

               
Conread position:
               
1-422
               

               
Cow position:
               
chr7:38536257-38536671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 110
               

               
Conread position:
               
1-422
               

               
Cow position:
               
chr7:67416780-67417206 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 213
               

               
Conread position:
               
4-287
               

               
Cow position:
               
chr7:67426160-67426442 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
112, 29
               

               
Conread position:
               
4-420
               

               
Cow position:
               
chr7:35287817-35287400 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
149, 109
               

               
Conread position:
               
4-422
               

               
Cow position:
               
chr7:27144082-27144487 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
90, 30
               

               
Conread position:
               
5-176
               

               
Cow position:
               
chr7:35297853-35297683 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
112, 0
               

               
Conread position:
               
5-188
               

               
Cow position:
               
chr7:20294612-20294799 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
86, 0
               

               
Conread position:
               
5-347
               

               
Cow position:
               
chr7:51911610-51911266 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 139
               

               
Conread position:
               
5-420
               

               
Cow position:
               
chr7:21985141-21985559 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 62
               

               
Conread position:
               
5-420
               

               
Cow position:
               
chr7:54602591-54603011 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 203
               

               
Conread position:
               
5-421
               

               
Cow position:
               
chr7:34148851-34149259 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
194, 106
               

               
Conread position:
               
5-421
               

               
Cow position:
               
chr7:34485651-34486074 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 183
               

               
Conread position:
               
5-422
               

               
Cow position:
               
chr7:1372908-1372490 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
137, 120
               

               
Conread position:
               
5-422
               

               
Cow position:
               
chr7:8145496-8145082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
103, 133
               

               
Conread position:
               
5-422
               

               
Cow position:
               
chr7:14139855-14139439 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
101, 202
               

               
Conread position:
               
5-422
               

               
Cow position:
               
chr7:21235269-21234849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 11
               

               
Conread position:
               
5-422
               

               
Cow position:
               
chr7:21975994-21975575 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
104, 199
               

               
Conread position:
               
5-422
               

               
Cow position:
               
chr7:24808727-24808304 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 199
               

               
Conread position:
               
5-422
               

               
Cow position:
               
chr7:39791478-39791917 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 205
               

               
Conread position:
               
5-422
               

               
Cow position:
               
chr7:67798593-67799013 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 198
               

               
Conread position:
               
6-407
               

               
Cow position:
               
chr7:68436302-68435898 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
107, 10
               

               
Conread position:
               
6-422
               

               
Cow position:
               
chr7:993976-994397 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 243
               

               
Conread position:
               
6-422
               

               
Cow position:
               
chr7:52120337-52119923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 41
               

               
Conread position:
               
11-422
               

               
Cow position:
               
chr7:45949400-45948988 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
103, 192
               

               
Conread position:
               
13-421
               

               
Cow position:
               
chr7:62442998-62442585 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
15, 39
               

               
Conread position:
               
18-405
               

               
Cow position:
               
chr7:68778624-68778231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 208
               

               
Conread position:
               
29-422
               

               
Cow position:
               
chr7:33406478-33406080 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 179
               

               
Conread position:
               
44-422
               

               
Cow position:
               
chr7:10431644-10431256 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 209
               

               
Conread position:
               
89-243
               

               
Cow position:
               
chr7:21241967-21241814 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
91-271
               

               
Cow position:
               
chr7:24421664-24421841 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
109, 0
               

               
Conread position:
               
112-422
               

               
Cow position:
               
chr7:68479018-68479329 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
118, 124
               

               
Conread position:
               
129-420
               

               
Cow position:
               
chr7:29370712-29370423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
13, 128
               

               
Conread position:
               
158-422
               

               
Cow position:
               
chr7:35297374-35297109 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
187, 86
               

               
Conread position:
               
1-419
               

               
Cow position:
               
chr8:45448377-45448804 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
317, 112
               

               
Conread position:
               
1-420
               

               
Cow position:
               
chr8:13735578-13735992 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
185, 112
               

               
Conread position:
               
1-422
               

               
Cow position:
               
chr8:9540563-9540144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 35
               

               
Conread position:
               
1-422
               

               
Cow position:
               
chr8:38607578-38607175 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 15
               

               
Conread position:
               
1-422
               

               
Cow position:
               
chr8:45161434-45161026 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
289, 111
               

               
Conread position:
               
4-420
               

               
Cow position:
               
chr8:46091931-46091517 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
125, 118
               

               
Conread position:
               
5-198
               

               
Cow position:
               
chr8:61198186-61197991 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
110, 0
               

               
Conread position:
               
5-242
               

               
Cow position:
               
chr8:14592258-14592026 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
194, 101
               

               
Conread position:
               
5-242
               

               
Cow position:
               
chr8:60060133-60060372 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 132
               

               
Conread position:
               
5-288
               

               
Cow position:
               
chr8:29440898-29440612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 202
               

               
Conread position:
               
5-317
               

               
Cow position:
               
chr8:19328884-19329198 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 202
               

               
Conread position:
               
5-317
               

               
Cow position:
               
chr8:45795814-45795501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 23
               

               
Conread position:
               
5-420
               

               
Cow position:
               
chr8:27983870-27983448 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 245
               

               
Conread position:
               
5-421
               

               
Cow position:
               
chr8:23216684-23217108 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
227, 66
               

               
Conread position:
               
5-422
               

               
Cow position:
               
chr8:4686324-4686742 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 156
               

               
Conread position:
               
5-422
               

               
Cow position:
               
chr8:8402270-8401850 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
194, 199
               

               
Conread position:
               
5-422
               

               
Cow position:
               
chr8:14929063-14928644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
107, 71
               

               
Conread position:
               
5-422
               

               
Cow position:
               
chr8:17310947-17311366 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 202
               

               
Conread position:
               
5-422
               

               
Cow position:
               
chr8:19050416-19050825 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 181
               

               
Conread position:
               
5-422
               

               
Cow position:
               
chr8:25407377-25407794 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 198
               

               
Conread position:
               
5-422
               

               
Cow position:
               
chr8:32319618-32319200 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 203
               

               
Conread position:
               
5-422
               

               
Cow position:
               
chr8:33588307-33588723 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 202
               

               
Conread position:
               
5-422
               

               
Cow position:
               
chr8:36636613-36636193 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 202
               

               
Conread position:
               
5-422
               

               
Cow position:
               
chr8:36637728-36637308 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 202
               

               
Conread position:
               
5-422
               

               
Cow position:
               
chr8:38390297-38390717 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 29
               

               
Conread position:
               
5-422
               

               
Cow position:
               
chr8:39196287-39195867 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 202
               

               
Conread position:
               
5-422
               

               
Cow position:
               
chr8:44244646-44244224 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 198
               

               
Conread position:
               
6-422
               

               
Cow position:
               
chr8:44036831-44036430 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
241, 32
               

               
Conread position:
               
7-422
               

               
Cow position:
               
chr8:44693226-44693636 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
102, 169
               

               
Conread position:
               
8-294
               

               
Cow position:
               
chr8:11757647-11757923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
94, 0
               

               
Conread position:
               
8-422
               

               
Cow position:
               
chr8:23770571-23770984 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
103, 239
               

               
Conread position:
               
8-422
               

               
Cow position:
               
chr8:59262962-59262544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 199
               

               
Conread position:
               
9-276
               

               
Cow position:
               
chr8:44121802-44122080 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
12, 38
               

               
Conread position:
               
9-421
               

               
Cow position:
               
chr8:8557204-8556800 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 105
               

               
Conread position:
               
9-422
               

               
Cow position:
               
chr8:3857079-3856665 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
104, 41
               

               
Conread position:
               
9-422
               

               
Cow position:
               
chr8:24916404-24915988 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
104, 198
               

               
Conread position:
               
9-422
               

               
Cow position:
               
chr8:25522331-25522750 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
104, 198
               

               
Conread position:
               
12-422
               

               
Cow position:
               
chr8:8316691-8316293 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
115, 6
               

               
Conread position:
               
13-422
               

               
Cow position:
               
chr8:5016118-5016530 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 195
               

               
Conread position:
               
13-422
               

               
Cow position:
               
chr8:8910163-8910570 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 68
               

               
Conread position:
               
52-420
               

               
Cow position:
               
chr8:45189069-45189431 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 197
               

               
Conread position:
               
56-422
               

               
Cow position:
               
chr8:3784690-3785059 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 90
               

               
Conread position:
               
102-422
               

               
Cow position:
               
chr8:25776636-25776324 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
275, 98
               

               
Conread position:
               
105-418
               

               
Cow position:
               
chr8:11831729-11832043 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
277, 139
               

               
Conread position:
               
134-396
               

               
Cow position:
               
chr8:61067179-61066921 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
243, 110
               

               
Conread position:
               
1-302
               

               
Cow position:
               
chr9:2697358-2697052 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
44, 250
               

               
Conread position:
               
5-277
               

               
Cow position:
               
chr9:32968322-32968596 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 242
               

               
Conread position:
               
5-282
               

               
Cow position:
               
chr9:417950-417670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
108, 202
               

               
Conread position:
               
5-294
               

               
Cow position:
               
chr9:1294235-1293944 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
9, 70
               

               
Conread position:
               
5-336
               

               
Cow position:
               
chr9:26712736-26712414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
113, 157
               

               
Conread position:
               
5-392
               

               
Cow position:
               
chr9:7002135-7002524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 123
               

               
Conread position:
               
5-398
               

               
Cow position:
               
chr9:6830963-6830580 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 107
               

               
Conread position:
               
5-420
               

               
Cow position:
               
chr9:59483088-59482674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
194, 176
               

               
Conread position:
               
5-421
               

               
Cow position:
               
chr9:37971626-37971210 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 202
               

               
Conread position:
               
5-422
               

               
Cow position:
               
chr9:1996339-1995912 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 209
               

               
Conread position:
               
5-422
               

               
Cow position:
               
chr9:2170639-2171060 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
110, 56
               

               
Conread position:
               
5-422
               

               
Cow position:
               
chr9:3548589-3548170 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
194, 199
               

               
Conread position:
               
5-422
               

               
Cow position:
               
chr9:5003594-5004000 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 165
               

               
Conread position:
               
5-422
               

               
Cow position:
               
chr9:6051459-6051048 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
372, 94
               

               
Conread position:
               
5-422
               

               
Cow position:
               
chr9:9012689-9013107 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 183
               

               
Conread position:
               
5-422
               

               
Cow position:
               
chr9:10321403-10321811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 202
               

               
Conread position:
               
5-422
               

               
Cow position:
               
chr9:16175349-16175768 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
96, 201
               

               
Conread position:
               
5-422
               

               
Cow position:
               
chr9:27034289-27034702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 126
               

               
Conread position:
               
5-422
               

               
Cow position:
               
chr9:28021128-28021550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 56
               

               
Conread position:
               
5-422
               

               
Cow position:
               
chr9:29028648-29028227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 135
               

               
Conread position:
               
5-422
               

               
Cow position:
               
chr9:31807121-31807535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
194, 178
               

               
Conread position:
               
5-422
               

               
Cow position:
               
chr9:37163227-37162805 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 202
               

               
Conread position:
               
5-422
               

               
Cow position:
               
chr9:59456018-59455597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 202
               

               
Conread position:
               
5-422
               

               
Cow position:
               
chr9:59535680-59536096 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 80
               

               
Conread position:
               
5-422
               

               
Cow position:
               
chr9:60278441-60278020 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
103, 242
               

               
Conread position:
               
6-417
               

               
Cow position:
               
chr9:31020388-31020804 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 186
               

               
Conread position:
               
7-341
               

               
Cow position:
               
chr9:54360190-54360520 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
106, 0
               

               
Conread position:
               
8-192
               

               
Cow position:
               
chr9:18510140-18509953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
105, 0
               

               
Conread position:
               
8-289
               

               
Cow position:
               
chr9:51183124-51182835 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
8.96831e-44
               

               
Alignm gaps (pig, cow):
               
156, 245
               

               
Conread position:
               
8-422
               

               
Cow position:
               
chr9:15072099-15072516 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 240
               

               
Conread position:
               
8-422
               

               
Cow position:
               
chr9:30671954-30672369 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 129
               

               
Conread position:
               
9-422
               

               
Cow position:
               
chr9:42309268-42309684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
104, 161
               

               
Conread position:
               
10-327
               

               
Cow position:
               
chr9:13219906-13220229 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
8, 0
               

               
Conread position:
               
11-335
               

               
Cow position:
               
chr9:22650742-22651057 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
160, 117
               

               
Conread position:
               
16-422
               

               
Cow position:
               
chr9:3155625-3156029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 31
               

               
Conread position:
               
50-422
               

               
Cow position:
               
chr9:25023675-25023300 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 156
               

               
Conread position:
               
103-420
               

               
Cow position:
               
chr9:3542492-3542806 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
96, 101
               

               
Conread position:
               
143-422
               

               
Cow position:
               
chr9:34992105-34992394 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
164, 58
               

               
Conread position:
               
1-422
               

               
Cow position:
               
chrX:11668953-11668535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
270, 112
               

               
Conread position:
               
2-421
               

               
Cow position:
               
chrX:21633098-21632681 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 28
               

               
Conread position:
               
2-422
               

               
Cow position:
               
chrX:17668802-17668383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 244
               

               
Conread position:
               
2-422
               

               
Cow position:
               
chrX:30179509-30179087 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
111, 204
               

               
Conread position:
               
4-216
               

               
Cow position:
               
chrX:21586522-21586735 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
15, 35
               

               
Conread position:
               
5-180
               

               
Cow position:
               
chrX:25187146-25187324 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
108, 0
               

               
Conread position:
               
5-291
               

               
Cow position:
               
chrX:5834677-5834396 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
5-420
               

               
Cow position:
               
chrX:22777802-22778217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
375, 107
               

               
Conread position:
               
5-420
               

               
Cow position:
               
chrX:23392115-23391694 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 202
               

               
Conread position:
               
5-422
               

               
Cow position:
               
chrX:18955028-18954615 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
97, 181
               

               
Conread position:
               
5-422
               

               
Cow position:
               
chrX:21222414-21222835 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 242
               

               
Conread position:
               
5-422
               

               
Cow position:
               
chrX:21602375-21602786 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
103, 158
               

               
Conread position:
               
5-422
               

               
Cow position:
               
chrX:22487675-22488088 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 203
               

               
Conread position:
               
5-422
               

               
Cow position:
               
chrX:23456084-23455671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 140
               

               
Conread position:
               
5-422
               

               
Cow position:
               
chrX:24122431-24122013 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
104, 242
               

               
Conread position:
               
5-422
               

               
Cow position:
               
chrX:26504682-26505091 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 68
               

               
Conread position:
               
5-422
               

               
Cow position:
               
chrX:26527462-26527883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 202
               

               
Conread position:
               
5-422
               

               
Cow position:
               
chrX:26767706-26767291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
142, 129
               

               
Conread position:
               
5-422
               

               
Cow position:
               
chrX:29854077-29853659 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
104, 202
               

               
Conread position:
               
5-422
               

               
Cow position:
               
chrX:30232617-30232201 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 202
               

               
Conread position:
               
5-422
               

               
Cow position:
               
chrX:30710841-30711260 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 39
               

               
Conread position:
               
5-422
               

               
Cow position:
               
chrX:35017314-35017715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
103, 53
               

               
Conread position:
               
5-422
               

               
Cow position:
               
chrX:40057575-40057158 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
372, 239
               

               
Conread position:
               
6-274
               

               
Cow position:
               
chrX:25332582-25332846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
6-422
               

               
Cow position:
               
chrX:24484920-24484505 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
223, 228
               

               
Conread position:
               
8-278
               

               
Cow position:
               
chrX:41151717-41151987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
107, 198
               

               
Conread position:
               
8-422
               

               
Cow position:
               
chrX:15598419-15598837 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 199
               

               
Conread position:
               
8-422
               

               
Cow position:
               
chrX:16698791-16699207 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 161
               

               
Conread position:
               
8-422
               

               
Cow position:
               
chrX:30184398-30183987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
103, 78
               

               
Conread position:
               
9-292
               

               
Cow position:
               
chrX:29092995-29093280 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
104, 198
               

               
Conread position:
               
9-421
               

               
Cow position:
               
chrX:13413625-13413210 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
104, 198
               

               
Conread position:
               
9-422
               

               
Cow position:
               
chrX:1546425-1546842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
104, 136
               

               
Conread position:
               
9-422
               

               
Cow position:
               
chrX:32095468-32095059 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
190, 104
               

               
Conread position:
               
11-422
               

               
Cow position:
               
chrX:13007141-13006718 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
101, 236
               

               
Conread position:
               
13-420
               

               
Cow position:
               
chrX:970259-970671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 195
               

               
Conread position:
               
13-422
               

               
Cow position:
               
chrX:30142896-30142487 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 192
               

               
Conread position:
               
19-338
               

               
Cow position:
               
chrX:39717301-39717619 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
170, 94
               

               
Conread position:
               
47-421
               

               
Cow position:
               
chrX:21794628-21795001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 189
               

               
Conread position:
               
50-377
               

               
Cow position:
               
chrX:6276059-6275733 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 77
               

               
Conread position:
               
106-392
               

               
Cow position:
               
chrX:2537181-2536894 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
271, 138
               

               
Conread position:
               
167-422
               

               
Cow position:
               
chrX:28603804-28603551 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
210, 77