Cow genome map
| Conread name: | Emb1-C0005213_B18 |
| Conread position: | 94-617 |
| Cow position: | chr10:10686429-10686970 (view UCSC Genome Browser custom track) |
| Alignm length: | 550 |
| Alignm identity: | 346 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 22, 53 |
| Conread position: | 159-468 |
| Cow position: | chr10:41455117-41455441 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 221 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 73, 129 |
| Conread position: | 212-613 |
| Cow position: | chr10:31047094-31047509 (view UCSC Genome Browser custom track) |
| Alignm length: | 421 |
| Alignm identity: | 268 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 55, 224 |
| Conread position: | 331-620 |
| Cow position: | chr10:36443754-36443472 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 201 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 110, 94 |
| Conread position: | 33-603 |
| Cow position: | chr11:40019360-40018803 (view UCSC Genome Browser custom track) |
| Alignm length: | 585 |
| Alignm identity: | 367 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 67, 42 |
| Conread position: | 70-375 |
| Cow position: | chr11:45853213-45852900 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 210 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 46, 85 |
| Conread position: | 75-617 |
| Cow position: | chr11:35570455-35569906 (view UCSC Genome Browser custom track) |
| Alignm length: | 563 |
| Alignm identity: | 364 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 21, 73 |
| Conread position: | 83-614 |
| Cow position: | chr12:5919152-5918604 (view UCSC Genome Browser custom track) |
| Alignm length: | 558 |
| Alignm identity: | 345 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 31, 16 |
| Conread position: | 69-573 |
| Cow position: | chr13:21587365-21587898 (view UCSC Genome Browser custom track) |
| Alignm length: | 543 |
| Alignm identity: | 352 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 12, 107 |
| Conread position: | 82-613 |
| Cow position: | chr13:18021534-18020983 (view UCSC Genome Browser custom track) |
| Alignm length: | 569 |
| Alignm identity: | 363 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 137, 39 |
| Conread position: | 107-603 |
| Cow position: | chr13:41397691-41398188 (view UCSC Genome Browser custom track) |
| Alignm length: | 515 |
| Alignm identity: | 324 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 9, 39 |
| Conread position: | 83-369 |
| Cow position: | chr14:37943735-37944038 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 201 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 13, 52 |
| Conread position: | 80-448 |
| Cow position: | chr15:16925985-16925602 (view UCSC Genome Browser custom track) |
| Alignm length: | 392 |
| Alignm identity: | 254 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 16, 69 |
| Conread position: | 83-369 |
| Cow position: | chr15:41785995-41785700 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 200 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 10, 73 |
| Conread position: | 70-448 |
| Cow position: | chr16:28373435-28373031 (view UCSC Genome Browser custom track) |
| Alignm length: | 409 |
| Alignm identity: | 265 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 30, 93 |
| Conread position: | 70-617 |
| Cow position: | chr16:40382675-40383253 (view UCSC Genome Browser custom track) |
| Alignm length: | 586 |
| Alignm identity: | 367 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 44, 23 |
| Conread position: | 83-493 |
| Cow position: | chr16:13555743-13555335 (view UCSC Genome Browser custom track) |
| Alignm length: | 424 |
| Alignm identity: | 272 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 10, 128 |
| Conread position: | 104-613 |
| Cow position: | chr16:18092188-18091679 (view UCSC Genome Browser custom track) |
| Alignm length: | 532 |
| Alignm identity: | 338 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 13, 41 |
| Conread position: | 132-617 |
| Cow position: | chr16:54213818-54214325 (view UCSC Genome Browser custom track) |
| Alignm length: | 516 |
| Alignm identity: | 332 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 88, 13 |
| Conread position: | 316-611 |
| Cow position: | chr16:47822276-47822575 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 192 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 48, 39 |
| Conread position: | 92-357 |
| Cow position: | chr17:38759587-38759319 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 173 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 32, 17 |
| Conread position: | 237-607 |
| Cow position: | chr17:41898909-41898529 (view UCSC Genome Browser custom track) |
| Alignm length: | 388 |
| Alignm identity: | 249 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 116, 53 |
| Conread position: | 83-617 |
| Cow position: | chr18:51330994-51331543 (view UCSC Genome Browser custom track) |
| Alignm length: | 562 |
| Alignm identity: | 357 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 18, 65 |
| Conread position: | 76-366 |
| Cow position: | chr19:40106298-40106581 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 195 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 40, 19 |
| Conread position: | 146-364 |
| Cow position: | chr19:40426359-40426575 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 153 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 72, 106 |
| Conread position: | 147-640 |
| Cow position: | chr19:17967567-17968059 (view UCSC Genome Browser custom track) |
| Alignm length: | 506 |
| Alignm identity: | 315 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 78, 105 |
| Conread position: | 280-630 |
| Cow position: | chr19:49401352-49401711 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 244 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 91, 47 |
| Conread position: | 84-435 |
| Cow position: | chr2:57699539-57699900 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 232 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 18, 64 |
| Conread position: | 106-617 |
| Cow position: | chr2:62246963-62246436 (view UCSC Genome Browser custom track) |
| Alignm length: | 536 |
| Alignm identity: | 339 |
| Alignm E-value: | 7e-34 |
| Alignm gaps (pig, cow): | 12, 48 |
| Conread position: | 107-613 |
| Cow position: | chr2:41947085-41947599 (view UCSC Genome Browser custom track) |
| Alignm length: | 528 |
| Alignm identity: | 334 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 9, 32 |
| Conread position: | 162-607 |
| Cow position: | chr2:38560984-38561434 (view UCSC Genome Browser custom track) |
| Alignm length: | 461 |
| Alignm identity: | 289 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 87, 113 |
| Conread position: | 1-197 |
| Cow position: | chr20:15279483-15279670 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 155 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 98, 58 |
| Conread position: | 287-649 |
| Cow position: | chr20:15279831-15280208 (view UCSC Genome Browser custom track) |
| Alignm length: | 381 |
| Alignm identity: | 301 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 91, 30 |
| Conread position: | 32-369 |
| Cow position: | chr21:12464962-12465306 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 233 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 30, 100 |
| Conread position: | 76-375 |
| Cow position: | chr21:1059538-1059837 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 200 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 17, 7 |
| Conread position: | 99-617 |
| Cow position: | chr21:37797478-37797999 (view UCSC Genome Browser custom track) |
| Alignm length: | 546 |
| Alignm identity: | 351 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 119, 20 |
| Conread position: | 225-611 |
| Cow position: | chr21:20534061-20533675 (view UCSC Genome Browser custom track) |
| Alignm length: | 397 |
| Alignm identity: | 258 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 222, 29 |
| Conread position: | 92-578 |
| Cow position: | chr22:13865687-13865174 (view UCSC Genome Browser custom track) |
| Alignm length: | 520 |
| Alignm identity: | 328 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 28, 55 |
| Conread position: | 76-445 |
| Cow position: | chr23:9607941-9608310 (view UCSC Genome Browser custom track) |
| Alignm length: | 381 |
| Alignm identity: | 244 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 25, 71 |
| Conread position: | 76-604 |
| Cow position: | chr23:250764-250209 (view UCSC Genome Browser custom track) |
| Alignm length: | 563 |
| Alignm identity: | 356 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 26, 72 |
| Conread position: | 204-605 |
| Cow position: | chr24:6055249-6054824 (view UCSC Genome Browser custom track) |
| Alignm length: | 430 |
| Alignm identity: | 277 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 37, 134 |
| Conread position: | 214-610 |
| Cow position: | chr24:1498003-1498397 (view UCSC Genome Browser custom track) |
| Alignm length: | 409 |
| Alignm identity: | 263 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 32, 13 |
| Conread position: | 89-613 |
| Cow position: | chr25:33065665-33066195 (view UCSC Genome Browser custom track) |
| Alignm length: | 546 |
| Alignm identity: | 351 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 27, 10 |
| Conread position: | 174-614 |
| Cow position: | chr25:15284526-15284986 (view UCSC Genome Browser custom track) |
| Alignm length: | 466 |
| Alignm identity: | 295 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 52, 24 |
| Conread position: | 181-643 |
| Cow position: | chr25:34413916-34414379 (view UCSC Genome Browser custom track) |
| Alignm length: | 483 |
| Alignm identity: | 304 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 21, 26 |
| Conread position: | 138-617 |
| Cow position: | chr26:32680621-32680123 (view UCSC Genome Browser custom track) |
| Alignm length: | 504 |
| Alignm identity: | 322 |
| Alignm E-value: | 9e-35 |
| Alignm gaps (pig, cow): | 211, 7 |
| Conread position: | 70-369 |
| Cow position: | chr27:15258337-15258639 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 202 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 13, 79 |
| Conread position: | 92-448 |
| Cow position: | chr28:22791585-22791951 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 235 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 24, 102 |
| Conread position: | 71-351 |
| Cow position: | chr29:5340035-5339748 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 193 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 25, 76 |
| Conread position: | 223-617 |
| Cow position: | chr29:1511080-1510686 (view UCSC Genome Browser custom track) |
| Alignm length: | 404 |
| Alignm identity: | 259 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 151, 42 |
| Conread position: | 70-368 |
| Cow position: | chr3:10046141-10046437 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 204 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 31, 109 |
| Conread position: | 76-441 |
| Cow position: | chr3:41582368-41582750 (view UCSC Genome Browser custom track) |
| Alignm length: | 387 |
| Alignm identity: | 248 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 40, 33 |
| Conread position: | 80-619 |
| Cow position: | chr3:60150814-60151383 (view UCSC Genome Browser custom track) |
| Alignm length: | 579 |
| Alignm identity: | 377 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 13, 82 |
| Conread position: | 143-448 |
| Cow position: | chr3:54686373-54686067 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 205 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 208, 80 |
| Conread position: | 131-642 |
| Cow position: | chr4:29134871-29134358 (view UCSC Genome Browser custom track) |
| Alignm length: | 530 |
| Alignm identity: | 339 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 104, 22 |
| Conread position: | 69-369 |
| Cow position: | chr5:72299398-72299090 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 206 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 24, 76 |
| Conread position: | 76-351 |
| Cow position: | chr5:26348611-26348339 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 184 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 40, 71 |
| Conread position: | 83-613 |
| Cow position: | chr5:54658729-54658186 (view UCSC Genome Browser custom track) |
| Alignm length: | 556 |
| Alignm identity: | 344 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 9, 65 |
| Conread position: | 116-613 |
| Cow position: | chr6:50621592-50622096 (view UCSC Genome Browser custom track) |
| Alignm length: | 521 |
| Alignm identity: | 337 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 102, 73 |
| Conread position: | 67-617 |
| Cow position: | chr7:51941357-51941928 (view UCSC Genome Browser custom track) |
| Alignm length: | 580 |
| Alignm identity: | 374 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 26, 74 |
| Conread position: | 82-446 |
| Cow position: | chr7:30546260-30545902 (view UCSC Genome Browser custom track) |
| Alignm length: | 376 |
| Alignm identity: | 245 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 38, 6 |
| Conread position: | 231-601 |
| Cow position: | chr8:46097749-46098122 (view UCSC Genome Browser custom track) |
| Alignm length: | 382 |
| Alignm identity: | 242 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 59, 51 |
| Conread position: | 105-606 |
| Cow position: | chr9:13117604-13117089 (view UCSC Genome Browser custom track) |
| Alignm length: | 527 |
| Alignm identity: | 348 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 12, 42 |
| Conread position: | 171-606 |
| Cow position: | chr9:62734120-62733678 (view UCSC Genome Browser custom track) |
| Alignm length: | 450 |
| Alignm identity: | 282 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 69, 104 |
| Conread position: | 250-613 |
| Cow position: | chr9:9247037-9247410 (view UCSC Genome Browser custom track) |
| Alignm length: | 377 |
| Alignm identity: | 244 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 109, 78 |
| Conread position: | 92-367 |
| Cow position: | chrX:20758372-20758093 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 183 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 26, 55 |
| Conread position: | 123-620 |
| Cow position: | chrX:25144014-25144514 (view UCSC Genome Browser custom track) |
| Alignm length: | 512 |
| Alignm identity: | 317 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 99, 22 |