Cow genome map
| Conread name: | Emb1-C0005216_N04 |
| Conread position: | 1-670 |
| Cow position: | chr1:44101786-44101115 (view UCSC Genome Browser custom track) |
| Alignm length: | 693 |
| Alignm identity: | 478 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 242 |
| Conread position: | 1-670 |
| Cow position: | chr1:61738547-61737864 (view UCSC Genome Browser custom track) |
| Alignm length: | 697 |
| Alignm identity: | 474 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 83 |
| Conread position: | 1-679 |
| Cow position: | chr1:31422300-31421645 (view UCSC Genome Browser custom track) |
| Alignm length: | 692 |
| Alignm identity: | 467 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 15 |
| Conread position: | 2-598 |
| Cow position: | chr1:80556095-80555517 (view UCSC Genome Browser custom track) |
| Alignm length: | 611 |
| Alignm identity: | 416 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 286, 39 |
| Conread position: | 3-342 |
| Cow position: | chr1:59644815-59645150 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 235 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 32, 55 |
| Conread position: | 3-539 |
| Cow position: | chr1:18014229-18013671 (view UCSC Genome Browser custom track) |
| Alignm length: | 564 |
| Alignm identity: | 371 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 90 |
| Conread position: | 96-665 |
| Cow position: | chr1:98865091-98864488 (view UCSC Genome Browser custom track) |
| Alignm length: | 609 |
| Alignm identity: | 434 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 186, 216 |
| Conread position: | 120-663 |
| Cow position: | chr1:38396314-38396834 (view UCSC Genome Browser custom track) |
| Alignm length: | 554 |
| Alignm identity: | 393 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 120 |
| Conread position: | 415-673 |
| Cow position: | chr1:73011110-73011359 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 182 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 100, 93 |
| Conread position: | 420-581 |
| Cow position: | chr1:34511537-34511693 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 125 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 79, 36 |
| Conread position: | 430-670 |
| Cow position: | chr1:33389139-33389371 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 170 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 191, 40 |
| Conread position: | 439-561 |
| Cow position: | chr1:97329465-97329342 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 95 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 101, 0 |
| Conread position: | 1-625 |
| Cow position: | chr10:11820315-11820971 (view UCSC Genome Browser custom track) |
| Alignm length: | 669 |
| Alignm identity: | 484 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 253 |
| Conread position: | 1-673 |
| Cow position: | chr10:24978149-24977472 (view UCSC Genome Browser custom track) |
| Alignm length: | 694 |
| Alignm identity: | 553 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 90 |
| Conread position: | 40-367 |
| Cow position: | chr10:53363984-53364333 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 258 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 94, 35 |
| Conread position: | 42-673 |
| Cow position: | chr10:6260765-6260130 (view UCSC Genome Browser custom track) |
| Alignm length: | 653 |
| Alignm identity: | 490 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 235, 44 |
| Conread position: | 144-529 |
| Cow position: | chr10:39880916-39880517 (view UCSC Genome Browser custom track) |
| Alignm length: | 411 |
| Alignm identity: | 289 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 111 |
| Conread position: | 206-672 |
| Cow position: | chr10:64302951-64302480 (view UCSC Genome Browser custom track) |
| Alignm length: | 489 |
| Alignm identity: | 344 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 224 |
| Conread position: | 371-606 |
| Cow position: | chr10:21076748-21076982 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 179 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 35, 173 |
| Conread position: | 431-671 |
| Cow position: | chr10:60205673-60205434 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 161 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 131, 30 |
| Conread position: | 456-665 |
| Cow position: | chr10:64288602-64288406 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 146 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 79, 0 |
| Conread position: | 1-622 |
| Cow position: | chr11:13162614-13163200 (view UCSC Genome Browser custom track) |
| Alignm length: | 625 |
| Alignm identity: | 454 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 83 |
| Conread position: | 2-679 |
| Cow position: | chr11:44230750-44231428 (view UCSC Genome Browser custom track) |
| Alignm length: | 702 |
| Alignm identity: | 506 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 9 |
| Conread position: | 3-620 |
| Cow position: | chr11:30186922-30187529 (view UCSC Genome Browser custom track) |
| Alignm length: | 626 |
| Alignm identity: | 458 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 246 |
| Conread position: | 30-642 |
| Cow position: | chr11:36761751-36762347 (view UCSC Genome Browser custom track) |
| Alignm length: | 625 |
| Alignm identity: | 432 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 247, 13 |
| Conread position: | 267-670 |
| Cow position: | chr11:13067154-13066758 (view UCSC Genome Browser custom track) |
| Alignm length: | 411 |
| Alignm identity: | 300 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 108 |
| Conread position: | 416-675 |
| Cow position: | chr11:30205590-30205846 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 186 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 198, 84 |
| Conread position: | 421-649 |
| Cow position: | chr11:36713439-36713223 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 173 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 1-344 |
| Cow position: | chr13:22186046-22185695 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 272 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 155 |
| Conread position: | 3-672 |
| Cow position: | chr13:21131016-21131690 (view UCSC Genome Browser custom track) |
| Alignm length: | 689 |
| Alignm identity: | 520 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 8 |
| Conread position: | 414-606 |
| Cow position: | chr13:30261849-30262048 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 158 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 17, 65 |
| Conread position: | 414-672 |
| Cow position: | chr13:34048355-34048605 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 189 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 104, 0 |
| Conread position: | 415-672 |
| Cow position: | chr13:22185496-22185250 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 185 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 249, 22 |
| Conread position: | 3-655 |
| Cow position: | chr14:30707103-30706454 (view UCSC Genome Browser custom track) |
| Alignm length: | 680 |
| Alignm identity: | 475 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 87 |
| Conread position: | 5-671 |
| Cow position: | chr14:38816633-38815955 (view UCSC Genome Browser custom track) |
| Alignm length: | 700 |
| Alignm identity: | 499 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 128 |
| Conread position: | 332-609 |
| Cow position: | chr14:42123043-42122785 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 210 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 41, 69 |
| Conread position: | 348-676 |
| Cow position: | chr14:9516271-9515952 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 234 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 25, 44 |
| Conread position: | 371-664 |
| Cow position: | chr14:33487514-33487792 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 203 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 139, 52 |
| Conread position: | 1-679 |
| Cow position: | chr15:20357707-20357032 (view UCSC Genome Browser custom track) |
| Alignm length: | 703 |
| Alignm identity: | 496 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 71 |
| Conread position: | 2-405 |
| Cow position: | chr15:32672442-32672876 (view UCSC Genome Browser custom track) |
| Alignm length: | 440 |
| Alignm identity: | 313 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 257 |
| Conread position: | 83-676 |
| Cow position: | chr15:30810281-30810868 (view UCSC Genome Browser custom track) |
| Alignm length: | 605 |
| Alignm identity: | 396 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 98 |
| Conread position: | 153-670 |
| Cow position: | chr15:498111-498614 (view UCSC Genome Browser custom track) |
| Alignm length: | 524 |
| Alignm identity: | 357 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 128, 56 |
| Conread position: | 362-642 |
| Cow position: | chr15:1254428-1254682 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 191 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 414-670 |
| Cow position: | chr15:7788090-7787844 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 178 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 201, 47 |
| Conread position: | 2-606 |
| Cow position: | chr16:24155223-24154608 (view UCSC Genome Browser custom track) |
| Alignm length: | 628 |
| Alignm identity: | 450 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 223 |
| Conread position: | 3-676 |
| Cow position: | chr16:28438565-28437888 (view UCSC Genome Browser custom track) |
| Alignm length: | 692 |
| Alignm identity: | 486 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 107 |
| Conread position: | 111-341 |
| Cow position: | chr16:13018434-13018671 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 168 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 103, 43 |
| Conread position: | 272-664 |
| Cow position: | chr16:29091196-29090806 (view UCSC Genome Browser custom track) |
| Alignm length: | 409 |
| Alignm identity: | 265 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 14, 77 |
| Conread position: | 374-672 |
| Cow position: | chr16:25170555-25170840 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 212 |
| Alignm E-value: | 8e-39 |
| Alignm gaps (pig, cow): | 29, 41 |
| Conread position: | 417-588 |
| Cow position: | chr16:41757269-41757105 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 134 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 23, 55 |
| Conread position: | 230-670 |
| Cow position: | chr17:15383922-15384349 (view UCSC Genome Browser custom track) |
| Alignm length: | 447 |
| Alignm identity: | 306 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 64 |
| Conread position: | 448-642 |
| Cow position: | chr17:13893627-13893445 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 145 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 1-613 |
| Cow position: | chr18:9186765-9186159 (view UCSC Genome Browser custom track) |
| Alignm length: | 629 |
| Alignm identity: | 449 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 159 |
| Conread position: | 12-528 |
| Cow position: | chr18:46877982-46877447 (view UCSC Genome Browser custom track) |
| Alignm length: | 545 |
| Alignm identity: | 380 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 266, 22 |
| Conread position: | 61-328 |
| Cow position: | chr18:16843266-16842997 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 194 |
| Alignm E-value: | 8e-39 |
| Alignm gaps (pig, cow): | 31, 36 |
| Conread position: | 219-670 |
| Cow position: | chr18:4885349-4884894 (view UCSC Genome Browser custom track) |
| Alignm length: | 465 |
| Alignm identity: | 327 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 58, 30 |
| Conread position: | 2-479 |
| Cow position: | chr19:20111221-20110763 (view UCSC Genome Browser custom track) |
| Alignm length: | 494 |
| Alignm identity: | 337 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 37, 66 |
| Conread position: | 176-670 |
| Cow position: | chr19:32183292-32182785 (view UCSC Genome Browser custom track) |
| Alignm length: | 521 |
| Alignm identity: | 337 |
| Alignm E-value: | 6e-37 |
| Alignm gaps (pig, cow): | 101, 71 |
| Conread position: | 1-588 |
| Cow position: | chr2:45921798-45921213 (view UCSC Genome Browser custom track) |
| Alignm length: | 605 |
| Alignm identity: | 451 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 57 |
| Conread position: | 2-670 |
| Cow position: | chr2:11691644-11692303 (view UCSC Genome Browser custom track) |
| Alignm length: | 691 |
| Alignm identity: | 478 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 51 |
| Conread position: | 3-670 |
| Cow position: | chr2:77208109-77208792 (view UCSC Genome Browser custom track) |
| Alignm length: | 697 |
| Alignm identity: | 474 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 289, 30 |
| Conread position: | 55-665 |
| Cow position: | chr2:45968842-45968209 (view UCSC Genome Browser custom track) |
| Alignm length: | 650 |
| Alignm identity: | 458 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 210, 184 |
| Conread position: | 149-676 |
| Cow position: | chr2:63977520-63978055 (view UCSC Genome Browser custom track) |
| Alignm length: | 543 |
| Alignm identity: | 376 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 128, 63 |
| Conread position: | 203-339 |
| Cow position: | chr20:24517855-24517992 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 103 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 74, 0 |
| Conread position: | 301-670 |
| Cow position: | chr20:18325269-18324906 (view UCSC Genome Browser custom track) |
| Alignm length: | 380 |
| Alignm identity: | 254 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 35, 76 |
| Conread position: | 361-664 |
| Cow position: | chr20:13434573-13434289 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 202 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 135, 39 |
| Conread position: | 419-672 |
| Cow position: | chr20:41720587-41720830 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 169 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 251, 99 |
| Conread position: | 2-571 |
| Cow position: | chr21:6699483-6698907 (view UCSC Genome Browser custom track) |
| Alignm length: | 597 |
| Alignm identity: | 408 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 56 |
| Conread position: | 228-564 |
| Cow position: | chr21:25974572-25974909 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 243 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 49, 158 |
| Conread position: | 458-670 |
| Cow position: | chr21:37292738-37292949 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 164 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 15, 80 |
| Conread position: | 1-345 |
| Cow position: | chr22:293248-292902 (view UCSC Genome Browser custom track) |
| Alignm length: | 360 |
| Alignm identity: | 265 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 89 |
| Conread position: | 1-642 |
| Cow position: | chr22:298423-297760 (view UCSC Genome Browser custom track) |
| Alignm length: | 674 |
| Alignm identity: | 470 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 160 |
| Conread position: | 3-676 |
| Cow position: | chr22:36581255-36580592 (view UCSC Genome Browser custom track) |
| Alignm length: | 689 |
| Alignm identity: | 511 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 51 |
| Conread position: | 43-345 |
| Cow position: | chr22:35943249-35942942 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 241 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 213 |
| Conread position: | 306-569 |
| Cow position: | chr22:36552880-36552632 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 188 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 72, 56 |
| Conread position: | 360-676 |
| Cow position: | chr22:36591531-36591235 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 239 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 71, 40 |
| Conread position: | 414-672 |
| Cow position: | chr22:8875550-8875815 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 201 |
| Alignm E-value: | 9.00054e-42 |
| Alignm gaps (pig, cow): | 19, 32 |
| Conread position: | 421-673 |
| Cow position: | chr22:292514-292264 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 205 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 88 |
| Conread position: | 1-594 |
| Cow position: | chr23:6216484-6217114 (view UCSC Genome Browser custom track) |
| Alignm length: | 641 |
| Alignm identity: | 442 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 101 |
| Conread position: | 4-652 |
| Cow position: | chr23:26836209-26836846 (view UCSC Genome Browser custom track) |
| Alignm length: | 664 |
| Alignm identity: | 502 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 289, 25 |
| Conread position: | 418-654 |
| Cow position: | chr23:13509387-13509617 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 188 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 1-675 |
| Cow position: | chr24:6048264-6048881 (view UCSC Genome Browser custom track) |
| Alignm length: | 678 |
| Alignm identity: | 467 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 172, 83 |
| Conread position: | 3-676 |
| Cow position: | chr24:14873345-14872693 (view UCSC Genome Browser custom track) |
| Alignm length: | 685 |
| Alignm identity: | 514 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 139, 25 |
| Conread position: | 3-284 |
| Cow position: | chr25:23345386-23345095 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 205 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 32, 102 |
| Conread position: | 3-340 |
| Cow position: | chr25:11933572-11933226 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 242 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 32, 102 |
| Conread position: | 40-665 |
| Cow position: | chr25:3378755-3378109 (view UCSC Genome Browser custom track) |
| Alignm length: | 661 |
| Alignm identity: | 447 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 145, 44 |
| Conread position: | 46-679 |
| Cow position: | chr28:5800633-5801243 (view UCSC Genome Browser custom track) |
| Alignm length: | 638 |
| Alignm identity: | 461 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 279, 35 |
| Conread position: | 48-670 |
| Cow position: | chr28:29437267-29436622 (view UCSC Genome Browser custom track) |
| Alignm length: | 675 |
| Alignm identity: | 472 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 157, 41 |
| Conread position: | 68-652 |
| Cow position: | chr28:17311974-17312565 (view UCSC Genome Browser custom track) |
| Alignm length: | 614 |
| Alignm identity: | 405 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 103, 40 |
| Conread position: | 416-664 |
| Cow position: | chr28:10230231-10229979 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 195 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 120, 197 |
| Conread position: | 2-676 |
| Cow position: | chr29:16017214-16016539 (view UCSC Genome Browser custom track) |
| Alignm length: | 699 |
| Alignm identity: | 491 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 275, 28 |
| Conread position: | 24-672 |
| Cow position: | chr29:8062949-8062278 (view UCSC Genome Browser custom track) |
| Alignm length: | 684 |
| Alignm identity: | 473 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 23 |
| Conread position: | 1-672 |
| Cow position: | chr3:18729294-18728633 (view UCSC Genome Browser custom track) |
| Alignm length: | 686 |
| Alignm identity: | 456 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 21 |
| Conread position: | 2-636 |
| Cow position: | chr3:21305331-21304686 (view UCSC Genome Browser custom track) |
| Alignm length: | 665 |
| Alignm identity: | 487 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 275, 53 |
| Conread position: | 3-626 |
| Cow position: | chr3:17936225-17935577 (view UCSC Genome Browser custom track) |
| Alignm length: | 663 |
| Alignm identity: | 446 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 161 |
| Conread position: | 97-670 |
| Cow position: | chr3:12680468-12679903 (view UCSC Genome Browser custom track) |
| Alignm length: | 594 |
| Alignm identity: | 388 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 180, 30 |
| Conread position: | 134-670 |
| Cow position: | chr3:64821588-64822104 (view UCSC Genome Browser custom track) |
| Alignm length: | 552 |
| Alignm identity: | 379 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 142, 31 |
| Conread position: | 149-597 |
| Cow position: | chr3:49601943-49601512 (view UCSC Genome Browser custom track) |
| Alignm length: | 468 |
| Alignm identity: | 326 |
| Alignm E-value: | 4.99983e-42 |
| Alignm gaps (pig, cow): | 128, 29 |
| Conread position: | 290-642 |
| Cow position: | chr3:52655555-52655198 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 248 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 16, 210 |
| Conread position: | 371-604 |
| Cow position: | chr3:37624529-37624744 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 165 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 414-650 |
| Cow position: | chr3:70887016-70887238 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 166 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 107, 0 |
| Conread position: | 420-672 |
| Cow position: | chr3:31415412-31415665 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 193 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 1-649 |
| Cow position: | chr4:1497107-1496466 (view UCSC Genome Browser custom track) |
| Alignm length: | 666 |
| Alignm identity: | 484 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 69, 29 |
| Conread position: | 1-678 |
| Cow position: | chr4:969396-968695 (view UCSC Genome Browser custom track) |
| Alignm length: | 715 |
| Alignm identity: | 494 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 198 |
| Conread position: | 2-345 |
| Cow position: | chr4:62565630-62565985 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 260 |
| Alignm E-value: | 5.04467e-44 |
| Alignm gaps (pig, cow): | 33, 99 |
| Conread position: | 2-679 |
| Cow position: | chr4:4176080-4176761 (view UCSC Genome Browser custom track) |
| Alignm length: | 692 |
| Alignm identity: | 522 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 50 |
| Conread position: | 48-597 |
| Cow position: | chr4:22471873-22472422 (view UCSC Genome Browser custom track) |
| Alignm length: | 571 |
| Alignm identity: | 381 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 149, 34 |
| Conread position: | 290-665 |
| Cow position: | chr4:44925964-44925600 (view UCSC Genome Browser custom track) |
| Alignm length: | 384 |
| Alignm identity: | 259 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 138, 57 |
| Conread position: | 371-672 |
| Cow position: | chr4:32622025-32622307 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 216 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 295, 34 |
| Conread position: | 419-670 |
| Cow position: | chr4:54158346-54158587 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 181 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 12, 70 |
| Conread position: | 443-541 |
| Cow position: | chr4:19093094-19093192 (view UCSC Genome Browser custom track) |
| Alignm length: | 100 |
| Alignm identity: | 84 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 67, 75 |
| Conread position: | 2-672 |
| Cow position: | chr5:28022898-28023536 (view UCSC Genome Browser custom track) |
| Alignm length: | 682 |
| Alignm identity: | 459 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 242 |
| Conread position: | 29-675 |
| Cow position: | chr5:24108815-24108162 (view UCSC Genome Browser custom track) |
| Alignm length: | 673 |
| Alignm identity: | 470 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 222, 18 |
| Conread position: | 372-672 |
| Cow position: | chr5:41358331-41358050 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 201 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 294, 28 |
| Conread position: | 416-664 |
| Cow position: | chr5:18402211-18401970 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 174 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 17, 85 |
| Conread position: | 1-642 |
| Cow position: | chr6:6542842-6543486 (view UCSC Genome Browser custom track) |
| Alignm length: | 665 |
| Alignm identity: | 461 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 123, 27 |
| Conread position: | 4-339 |
| Cow position: | chr6:35433425-35433761 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 250 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 90 |
| Conread position: | 33-621 |
| Cow position: | chr6:69141959-69142532 (view UCSC Genome Browser custom track) |
| Alignm length: | 600 |
| Alignm identity: | 388 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 236, 46 |
| Conread position: | 332-528 |
| Cow position: | chr6:34025252-34025440 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 148 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 41, 69 |
| Conread position: | 387-642 |
| Cow position: | chr6:29221487-29221247 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 176 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 414-670 |
| Cow position: | chr6:35434067-35434314 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 184 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 109, 0 |
| Conread position: | 414-676 |
| Cow position: | chr6:31637617-31637364 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 192 |
| Alignm E-value: | 9e-38 |
| Alignm gaps (pig, cow): | 43, 28 |
| Conread position: | 418-673 |
| Cow position: | chr6:10630885-10631144 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 192 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 12, 188 |
| Conread position: | 1-517 |
| Cow position: | chr7:30119569-30119063 (view UCSC Genome Browser custom track) |
| Alignm length: | 527 |
| Alignm identity: | 378 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 218 |
| Conread position: | 1-672 |
| Cow position: | chr7:58993167-58993849 (view UCSC Genome Browser custom track) |
| Alignm length: | 701 |
| Alignm identity: | 431 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 35, 104 |
| Conread position: | 145-397 |
| Cow position: | chr7:41487674-41487936 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 195 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 132, 217 |
| Conread position: | 202-670 |
| Cow position: | chr7:67812343-67812819 (view UCSC Genome Browser custom track) |
| Alignm length: | 491 |
| Alignm identity: | 324 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 75, 34 |
| Conread position: | 202-673 |
| Cow position: | chr7:26851477-26851945 (view UCSC Genome Browser custom track) |
| Alignm length: | 484 |
| Alignm identity: | 332 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 76, 43 |
| Conread position: | 228-676 |
| Cow position: | chr7:30302432-30302880 (view UCSC Genome Browser custom track) |
| Alignm length: | 460 |
| Alignm identity: | 334 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 189 |
| Conread position: | 418-597 |
| Cow position: | chr7:40270103-40269928 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 130 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 48, 9 |
| Conread position: | 459-672 |
| Cow position: | chr7:19048489-19048282 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 159 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 207, 30 |
| Conread position: | 477-664 |
| Cow position: | chr7:41876196-41876007 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 146 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 59, 22 |
| Conread position: | 2-583 |
| Cow position: | chr8:51327724-51328323 (view UCSC Genome Browser custom track) |
| Alignm length: | 610 |
| Alignm identity: | 438 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 427 |
| Conread position: | 290-676 |
| Cow position: | chr8:16084812-16085187 (view UCSC Genome Browser custom track) |
| Alignm length: | 390 |
| Alignm identity: | 262 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 82, 61 |
| Conread position: | 421-671 |
| Cow position: | chr8:38586089-38585848 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 187 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 193, 18 |
| Conread position: | 422-670 |
| Cow position: | chr8:38578168-38577925 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 189 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 89, 0 |
| Conread position: | 471-676 |
| Cow position: | chr8:24874873-24874670 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 162 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 71, 45 |
| Conread position: | 1-673 |
| Cow position: | chr9:29328118-29328763 (view UCSC Genome Browser custom track) |
| Alignm length: | 687 |
| Alignm identity: | 472 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 44 |
| Conread position: | 2-654 |
| Cow position: | chr9:3726088-3726764 (view UCSC Genome Browser custom track) |
| Alignm length: | 684 |
| Alignm identity: | 509 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 406 |
| Conread position: | 17-672 |
| Cow position: | chr9:64158947-64159627 (view UCSC Genome Browser custom track) |
| Alignm length: | 694 |
| Alignm identity: | 488 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 14 |
| Conread position: | 51-643 |
| Cow position: | chr9:3394119-3393535 (view UCSC Genome Browser custom track) |
| Alignm length: | 608 |
| Alignm identity: | 445 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 226, 188 |
| Conread position: | 419-676 |
| Cow position: | chr9:59511224-59511488 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 204 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 126, 152 |
| Conread position: | 2-534 |
| Cow position: | chrX:20796318-20796877 (view UCSC Genome Browser custom track) |
| Alignm length: | 572 |
| Alignm identity: | 392 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 104 |
| Conread position: | 3-342 |
| Cow position: | chrX:17632108-17631760 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 269 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 91 |
| Conread position: | 110-346 |
| Cow position: | chrX:10418120-10417884 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 165 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 181, 18 |
| Conread position: | 189-670 |
| Cow position: | chrX:13417902-13417414 (view UCSC Genome Browser custom track) |
| Alignm length: | 502 |
| Alignm identity: | 331 |
| Alignm E-value: | 4.06377e-44 |
| Alignm gaps (pig, cow): | 89, 356 |
| Conread position: | 285-671 |
| Cow position: | chrX:2013027-2012640 (view UCSC Genome Browser custom track) |
| Alignm length: | 400 |
| Alignm identity: | 258 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 56, 41 |
| Conread position: | 327-567 |
| Cow position: | chrX:6251194-6250966 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 188 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 24, 75 |
| Conread position: | 414-664 |
| Cow position: | chrX:10417553-10417310 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 192 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 231, 122 |
| Conread position: | 415-678 |
| Cow position: | chrX:19873562-19873812 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 176 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 73, 0 |
| Conread position: | 427-545 |
| Cow position: | chrX:28875241-28875123 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 93 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 453-676 |
| Cow position: | chrX:29814631-29814864 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 180 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 70, 190 |
| Conread position: | 538-642 |
| Cow position: | chrX:28874894-28874791 (view UCSC Genome Browser custom track) |
| Alignm length: | 105 |
| Alignm identity: | 86 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 97, 0 |