Cow genome map
| Conread name: | Emb1-C0005218_G10 |
| Conread position: | 2-142 |
| Cow position: | chr1:44101784-44101646 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 118 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 60, 29 |
| Conread position: | 2-142 |
| Cow position: | chr1:63501419-63501555 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 110 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 86, 58 |
| Conread position: | 2-265 |
| Cow position: | chr1:33388265-33388537 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 217 |
| Alignm E-value: | 8.40779e-45 |
| Alignm gaps (pig, cow): | 133, 46 |
| Conread position: | 2-333 |
| Cow position: | chr1:31330827-31330481 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 244 |
| Alignm E-value: | 8e-34 |
| Alignm gaps (pig, cow): | 60, 109 |
| Conread position: | 2-339 |
| Cow position: | chr1:59644815-59645154 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 232 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 152, 53 |
| Conread position: | 2-386 |
| Cow position: | chr1:19992719-19992328 (view UCSC Genome Browser custom track) |
| Alignm length: | 403 |
| Alignm identity: | 269 |
| Alignm E-value: | 8e-33 |
| Alignm gaps (pig, cow): | 146, 19 |
| Conread position: | 2-576 |
| Cow position: | chr1:80556094-80555517 (view UCSC Genome Browser custom track) |
| Alignm length: | 612 |
| Alignm identity: | 409 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 144, 48 |
| Conread position: | 3-142 |
| Cow position: | chr1:99020994-99020858 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 116 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 76, 47 |
| Conread position: | 4-142 |
| Cow position: | chr1:32342112-32341974 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 108 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 58, 85 |
| Conread position: | 4-144 |
| Cow position: | chr1:98784013-98784154 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 111 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 58, 105 |
| Conread position: | 47-654 |
| Cow position: | chr1:31422257-31421652 (view UCSC Genome Browser custom track) |
| Alignm length: | 629 |
| Alignm identity: | 417 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 67 |
| Conread position: | 140-373 |
| Cow position: | chr1:99020841-99020613 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 169 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 37, 74 |
| Conread position: | 418-682 |
| Cow position: | chr1:44101348-44101083 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 196 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 26, 18 |
| Conread position: | 468-683 |
| Cow position: | chr1:33389196-33389403 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 153 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 151, 39 |
| Conread position: | 518-683 |
| Cow position: | chr1:98864613-98864451 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 126 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 130, 103 |
| Conread position: | 2-142 |
| Cow position: | chr10:11820317-11820458 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 111 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 60, 110 |
| Conread position: | 2-142 |
| Cow position: | chr10:39881275-39881134 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 116 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 54, 44 |
| Conread position: | 2-682 |
| Cow position: | chr10:24978147-24977447 (view UCSC Genome Browser custom track) |
| Alignm length: | 722 |
| Alignm identity: | 553 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 135, 52 |
| Conread position: | 25-432 |
| Cow position: | chr10:21076377-21076803 (view UCSC Genome Browser custom track) |
| Alignm length: | 433 |
| Alignm identity: | 294 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 123, 28 |
| Conread position: | 79-466 |
| Cow position: | chr10:20396790-20397180 (view UCSC Genome Browser custom track) |
| Alignm length: | 415 |
| Alignm identity: | 285 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 64, 31 |
| Conread position: | 193-683 |
| Cow position: | chr10:64302951-64302450 (view UCSC Genome Browser custom track) |
| Alignm length: | 515 |
| Alignm identity: | 356 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 69 |
| Conread position: | 283-669 |
| Cow position: | chr10:64288763-64288381 (view UCSC Genome Browser custom track) |
| Alignm length: | 402 |
| Alignm identity: | 267 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 92, 42 |
| Conread position: | 2-598 |
| Cow position: | chr11:30186922-30187529 (view UCSC Genome Browser custom track) |
| Alignm length: | 625 |
| Alignm identity: | 423 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 144, 53 |
| Conread position: | 2-678 |
| Cow position: | chr11:44230751-44231446 (view UCSC Genome Browser custom track) |
| Alignm length: | 724 |
| Alignm identity: | 513 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 130, 11 |
| Conread position: | 3-145 |
| Cow position: | chr11:28050166-28050028 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 109 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 87, 0 |
| Conread position: | 3-147 |
| Cow position: | chr11:17924819-17924672 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 111 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 56, 44 |
| Conread position: | 6-280 |
| Cow position: | chr11:9415779-9415509 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 204 |
| Alignm E-value: | 8.40779e-45 |
| Alignm gaps (pig, cow): | 140, 49 |
| Conread position: | 17-681 |
| Cow position: | chr11:36761730-36762403 (view UCSC Genome Browser custom track) |
| Alignm length: | 700 |
| Alignm identity: | 492 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 95 |
| Conread position: | 472-682 |
| Cow position: | chr11:36713369-36713167 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 155 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 171, 35 |
| Conread position: | 2-234 |
| Cow position: | chr12:8982507-8982263 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 180 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 146, 51 |
| Conread position: | 2-286 |
| Cow position: | chr12:17975460-17975751 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 222 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 140, 55 |
| Conread position: | 2-333 |
| Cow position: | chr13:22186044-22185699 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 248 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 144, 107 |
| Conread position: | 2-680 |
| Cow position: | chr13:21131016-21131719 (view UCSC Genome Browser custom track) |
| Alignm length: | 728 |
| Alignm identity: | 520 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 111, 11 |
| Conread position: | 468-681 |
| Cow position: | chr13:22185424-22185227 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 154 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 468-683 |
| Cow position: | chr13:34048429-34048634 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 160 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 175, 33 |
| Conread position: | 482-682 |
| Cow position: | chr13:31556901-31556703 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 152 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 148, 25 |
| Conread position: | 2-335 |
| Cow position: | chr14:14309507-14309156 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 240 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 130, 29 |
| Conread position: | 2-360 |
| Cow position: | chr14:37414324-37413944 (view UCSC Genome Browser custom track) |
| Alignm length: | 383 |
| Alignm identity: | 249 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 60, 110 |
| Conread position: | 2-670 |
| Cow position: | chr14:30707103-30706411 (view UCSC Genome Browser custom track) |
| Alignm length: | 707 |
| Alignm identity: | 504 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 84 |
| Conread position: | 7-342 |
| Cow position: | chr14:45850795-45851146 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 229 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 57, 23 |
| Conread position: | 17-654 |
| Cow position: | chr14:48406105-48405442 (view UCSC Genome Browser custom track) |
| Alignm length: | 685 |
| Alignm identity: | 458 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 131, 45 |
| Conread position: | 329-587 |
| Cow position: | chr14:42123052-42122785 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 208 |
| Alignm E-value: | 4.06377e-44 |
| Alignm gaps (pig, cow): | 43, 68 |
| Conread position: | 354-667 |
| Cow position: | chr14:9516271-9515942 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 237 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 25, 177 |
| Conread position: | 146-681 |
| Cow position: | chr15:30810360-30810894 (view UCSC Genome Browser custom track) |
| Alignm length: | 552 |
| Alignm identity: | 405 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 111, 19 |
| Conread position: | 2-142 |
| Cow position: | chr16:24155222-24155086 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 115 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 80, 53 |
| Conread position: | 2-337 |
| Cow position: | chr16:25294062-25294405 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 264 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 136, 11 |
| Conread position: | 3-346 |
| Cow position: | chr16:51685661-51686019 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 264 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 143, 58 |
| Conread position: | 469-682 |
| Cow position: | chr16:25170668-25170869 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 157 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 452-619 |
| Cow position: | chr17:13893604-13893445 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 126 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 39, 17 |
| Conread position: | 2-311 |
| Cow position: | chr18:16393637-16393313 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 238 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 136, 28 |
| Conread position: | 2-589 |
| Cow position: | chr18:9186763-9186161 (view UCSC Genome Browser custom track) |
| Alignm length: | 615 |
| Alignm identity: | 424 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 60, 110 |
| Conread position: | 206-683 |
| Cow position: | chr18:4885349-4884866 (view UCSC Genome Browser custom track) |
| Alignm length: | 501 |
| Alignm identity: | 363 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 30 |
| Conread position: | 2-142 |
| Cow position: | chr19:29209569-29209708 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 105 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 109, 0 |
| Conread position: | 2-146 |
| Cow position: | chr19:42299491-42299345 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 121 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 60, 111 |
| Conread position: | 2-310 |
| Cow position: | chr19:32665538-32665862 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 216 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 62, 111 |
| Conread position: | 2-321 |
| Cow position: | chr19:15953862-15954185 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 215 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 65, 60 |
| Conread position: | 2-478 |
| Cow position: | chr19:20111220-20110764 (view UCSC Genome Browser custom track) |
| Alignm length: | 488 |
| Alignm identity: | 347 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 76 |
| Conread position: | 4-604 |
| Cow position: | chr19:7450002-7449369 (view UCSC Genome Browser custom track) |
| Alignm length: | 651 |
| Alignm identity: | 447 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 142, 25 |
| Conread position: | 18-333 |
| Cow position: | chr19:32202771-32203099 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 221 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 85, 97 |
| Conread position: | 2-142 |
| Cow position: | chr2:11725297-11725433 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 116 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 57, 23 |
| Conread position: | 2-147 |
| Cow position: | chr2:32458557-32458411 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 111 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 57, 114 |
| Conread position: | 2-274 |
| Cow position: | chr2:38372297-38372550 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 199 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 237, 11 |
| Conread position: | 2-287 |
| Cow position: | chr2:202202-201909 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 210 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 60, 91 |
| Conread position: | 2-302 |
| Cow position: | chr2:4235627-4235929 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 228 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 142, 53 |
| Conread position: | 2-410 |
| Cow position: | chr2:15580535-15580111 (view UCSC Genome Browser custom track) |
| Alignm length: | 437 |
| Alignm identity: | 309 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 21 |
| Conread position: | 3-234 |
| Cow position: | chr2:52173866-52173624 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 183 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 59, 80 |
| Conread position: | 17-336 |
| Cow position: | chr2:43959076-43959395 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 219 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 129, 67 |
| Conread position: | 468-683 |
| Cow position: | chr2:77208614-77208825 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 152 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 40, 25 |
| Conread position: | 2-157 |
| Cow position: | chr20:2677081-2677237 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 121 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 59, 111 |
| Conread position: | 2-142 |
| Cow position: | chr21:26146848-26146710 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 112 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 53, 0 |
| Conread position: | 2-321 |
| Cow position: | chr21:10762490-10762809 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 244 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 141, 53 |
| Conread position: | 468-682 |
| Cow position: | chr21:37292770-37292978 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 165 |
| Alignm E-value: | 8.00001e-41 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 2-232 |
| Cow position: | chr22:45975888-45976130 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 174 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 86, 59 |
| Conread position: | 2-416 |
| Cow position: | chr22:3306821-3306392 (view UCSC Genome Browser custom track) |
| Alignm length: | 440 |
| Alignm identity: | 283 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 125, 15 |
| Conread position: | 2-682 |
| Cow position: | chr22:298421-297701 (view UCSC Genome Browser custom track) |
| Alignm length: | 731 |
| Alignm identity: | 496 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 85, 53 |
| Conread position: | 2-683 |
| Cow position: | chr22:36581255-36580566 (view UCSC Genome Browser custom track) |
| Alignm length: | 723 |
| Alignm identity: | 525 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 133, 39 |
| Conread position: | 3-366 |
| Cow position: | chr22:293245-292876 (view UCSC Genome Browser custom track) |
| Alignm length: | 377 |
| Alignm identity: | 270 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 84 |
| Conread position: | 135-682 |
| Cow position: | chr22:11782464-11781929 (view UCSC Genome Browser custom track) |
| Alignm length: | 561 |
| Alignm identity: | 361 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 234, 113 |
| Conread position: | 376-683 |
| Cow position: | chr22:36591521-36591209 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 233 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 39, 26 |
| Conread position: | 468-681 |
| Cow position: | chr22:292446-292239 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 167 |
| Alignm E-value: | 9.00054e-42 |
| Alignm gaps (pig, cow): | 201, 39 |
| Conread position: | 140-683 |
| Cow position: | chr23:26836348-26836895 (view UCSC Genome Browser custom track) |
| Alignm length: | 570 |
| Alignm identity: | 416 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 117, 87 |
| Conread position: | 1-142 |
| Cow position: | chr24:14873346-14873215 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 119 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 135-489 |
| Cow position: | chr24:6510682-6510317 (view UCSC Genome Browser custom track) |
| Alignm length: | 374 |
| Alignm identity: | 259 |
| Alignm E-value: | 6e-39 |
| Alignm gaps (pig, cow): | 119, 234 |
| Conread position: | 7-320 |
| Cow position: | chr25:18092977-18093302 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 212 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 55, 106 |
| Conread position: | 101-618 |
| Cow position: | chr25:20494411-20494943 (view UCSC Genome Browser custom track) |
| Alignm length: | 549 |
| Alignm identity: | 354 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 47, 81 |
| Conread position: | 345-677 |
| Cow position: | chr25:3378416-3378077 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 236 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 21, 97 |
| Conread position: | 325-682 |
| Cow position: | chr28:29436961-29436590 (view UCSC Genome Browser custom track) |
| Alignm length: | 379 |
| Alignm identity: | 263 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 73, 42 |
| Conread position: | 362-683 |
| Cow position: | chr28:10230285-10229935 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 251 |
| Alignm E-value: | 5e-39 |
| Alignm gaps (pig, cow): | 15, 35 |
| Conread position: | 2-142 |
| Cow position: | chr29:11855520-11855658 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 106 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 45, 32 |
| Conread position: | 2-142 |
| Cow position: | chr29:24198700-24198560 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 112 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 55, 109 |
| Conread position: | 2-683 |
| Cow position: | chr29:16017213-16016514 (view UCSC Genome Browser custom track) |
| Alignm length: | 722 |
| Alignm identity: | 504 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 60, 27 |
| Conread position: | 4-142 |
| Cow position: | chr29:4635043-4634913 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 108 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 2-142 |
| Cow position: | chr3:58947296-58947438 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 108 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 62, 110 |
| Conread position: | 2-267 |
| Cow position: | chr3:17775937-17776209 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 205 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 116, 54 |
| Conread position: | 2-476 |
| Cow position: | chr3:60388220-60388683 (view UCSC Genome Browser custom track) |
| Alignm length: | 492 |
| Alignm identity: | 322 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 329, 52 |
| Conread position: | 2-617 |
| Cow position: | chr3:21305330-21304683 (view UCSC Genome Browser custom track) |
| Alignm length: | 659 |
| Alignm identity: | 457 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 127 |
| Conread position: | 2-664 |
| Cow position: | chr3:18729292-18728622 (view UCSC Genome Browser custom track) |
| Alignm length: | 693 |
| Alignm identity: | 479 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 130, 19 |
| Conread position: | 3-142 |
| Cow position: | chr3:49276277-49276140 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 107 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 45, 80 |
| Conread position: | 407-683 |
| Cow position: | chr3:70887032-70887295 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 187 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 26, 58 |
| Conread position: | 468-683 |
| Cow position: | chr3:31415481-31415696 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 168 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 49, 39 |
| Conread position: | 2-140 |
| Cow position: | chr4:15263346-15263210 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 110 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 60, 80 |
| Conread position: | 2-332 |
| Cow position: | chr4:40824601-40824258 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 241 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 146, 53 |
| Conread position: | 2-683 |
| Cow position: | chr4:969394-968670 (view UCSC Genome Browser custom track) |
| Alignm length: | 740 |
| Alignm identity: | 504 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 144, 53 |
| Conread position: | 4-142 |
| Cow position: | chr4:4176083-4176214 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 117 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 4-285 |
| Cow position: | chr4:3830125-3830423 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 216 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 49, 99 |
| Conread position: | 12-142 |
| Cow position: | chr4:60673527-60673654 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 104 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 12-669 |
| Cow position: | chr4:496293-495616 (view UCSC Genome Browser custom track) |
| Alignm length: | 700 |
| Alignm identity: | 457 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 131, 19 |
| Conread position: | 138-507 |
| Cow position: | chr4:8598357-8597997 (view UCSC Genome Browser custom track) |
| Alignm length: | 374 |
| Alignm identity: | 242 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 115, 110 |
| Conread position: | 140-672 |
| Cow position: | chr4:4176231-4176777 (view UCSC Genome Browser custom track) |
| Alignm length: | 561 |
| Alignm identity: | 391 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 117, 154 |
| Conread position: | 282-683 |
| Cow position: | chr4:44925965-44925549 (view UCSC Genome Browser custom track) |
| Alignm length: | 432 |
| Alignm identity: | 305 |
| Alignm E-value: | 5.04467e-44 |
| Alignm gaps (pig, cow): | 97, 43 |
| Conread position: | 357-659 |
| Cow position: | chr4:32622004-32622312 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 227 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 21, 44 |
| Conread position: | 2-142 |
| Cow position: | chr5:57366283-57366142 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 110 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 60, 109 |
| Conread position: | 2-333 |
| Cow position: | chr5:51162653-51162988 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 237 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 142, 51 |
| Conread position: | 2-683 |
| Cow position: | chr5:28022899-28023566 (view UCSC Genome Browser custom track) |
| Alignm length: | 708 |
| Alignm identity: | 479 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 82, 56 |
| Conread position: | 404-617 |
| Cow position: | chr5:24108399-24108197 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 152 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 75, 58 |
| Conread position: | 2-142 |
| Cow position: | chr6:11353622-11353762 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 109 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 53, 109 |
| Conread position: | 2-284 |
| Cow position: | chr6:28474582-28474885 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 221 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 59, 109 |
| Conread position: | 2-399 |
| Cow position: | chr6:10630347-10630735 (view UCSC Genome Browser custom track) |
| Alignm length: | 417 |
| Alignm identity: | 294 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 141, 19 |
| Conread position: | 3-335 |
| Cow position: | chr6:35433425-35433764 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 244 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 141, 52 |
| Conread position: | 172-599 |
| Cow position: | chr6:69142101-69142532 (view UCSC Genome Browser custom track) |
| Alignm length: | 455 |
| Alignm identity: | 307 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 85, 24 |
| Conread position: | 400-682 |
| Cow position: | chr6:35434076-35434344 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 186 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 67, 32 |
| Conread position: | 439-683 |
| Cow position: | chr6:10630933-10631172 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 184 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 36, 14 |
| Conread position: | 468-677 |
| Cow position: | chr6:31637544-31637344 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 163 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 175, 39 |
| Conread position: | 2-142 |
| Cow position: | chr7:67812092-67812229 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 109 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 2-334 |
| Cow position: | chr7:68478423-68478764 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 246 |
| Alignm E-value: | 8e-37 |
| Alignm gaps (pig, cow): | 144, 53 |
| Conread position: | 2-405 |
| Cow position: | chr7:41487553-41487936 (view UCSC Genome Browser custom track) |
| Alignm length: | 409 |
| Alignm identity: | 303 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 15 |
| Conread position: | 2-485 |
| Cow position: | chr7:30119567-30119096 (view UCSC Genome Browser custom track) |
| Alignm length: | 494 |
| Alignm identity: | 337 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 144, 52 |
| Conread position: | 2-682 |
| Cow position: | chr7:19048918-19048257 (view UCSC Genome Browser custom track) |
| Alignm length: | 702 |
| Alignm identity: | 490 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 36 |
| Conread position: | 3-142 |
| Cow position: | chr7:59027974-59028106 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 111 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 215-683 |
| Cow position: | chr7:30302432-30302906 (view UCSC Genome Browser custom track) |
| Alignm length: | 490 |
| Alignm identity: | 343 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 66 |
| Conread position: | 2-155 |
| Cow position: | chr8:24876548-24876401 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 124 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 144, 52 |
| Conread position: | 2-371 |
| Cow position: | chr8:24420370-24419994 (view UCSC Genome Browser custom track) |
| Alignm length: | 384 |
| Alignm identity: | 244 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 162, 107 |
| Conread position: | 3-339 |
| Cow position: | chr8:15687991-15687644 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 251 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 145, 51 |
| Conread position: | 12-377 |
| Cow position: | chr8:9135723-9135354 (view UCSC Genome Browser custom track) |
| Alignm length: | 387 |
| Alignm identity: | 279 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 109, 43 |
| Conread position: | 13-144 |
| Cow position: | chr8:61067071-61066944 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 106 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 40, 47 |
| Conread position: | 468-683 |
| Cow position: | chr8:24874856-24874641 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 165 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 49, 154 |
| Conread position: | 2-142 |
| Cow position: | chr9:3726089-3726228 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 121 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 77, 52 |
| Conread position: | 2-682 |
| Cow position: | chr9:29328120-29328788 (view UCSC Genome Browser custom track) |
| Alignm length: | 704 |
| Alignm identity: | 476 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 144, 44 |
| Conread position: | 3-361 |
| Cow position: | chr9:37129726-37129358 (view UCSC Genome Browser custom track) |
| Alignm length: | 377 |
| Alignm identity: | 246 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 62, 85 |
| Conread position: | 16-137 |
| Cow position: | chr9:59510622-59510738 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 99 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 28-668 |
| Cow position: | chr9:64158957-64159642 (view UCSC Genome Browser custom track) |
| Alignm length: | 703 |
| Alignm identity: | 487 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 85, 27 |
| Conread position: | 468-683 |
| Cow position: | chr9:59511293-59511514 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 171 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 58, 39 |
| Conread position: | 2-302 |
| Cow position: | chrX:32430400-32430694 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 222 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 101, 48 |
| Conread position: | 2-320 |
| Cow position: | chrX:22778027-22778366 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 235 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 62, 114 |
| Conread position: | 2-333 |
| Cow position: | chrX:17668571-17668236 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 221 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 60, 86 |
| Conread position: | 2-374 |
| Cow position: | chrX:17632108-17631724 (view UCSC Genome Browser custom track) |
| Alignm length: | 395 |
| Alignm identity: | 282 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 90 |
| Conread position: | 2-396 |
| Cow position: | chrX:28875695-28875299 (view UCSC Genome Browser custom track) |
| Alignm length: | 416 |
| Alignm identity: | 306 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 141, 25 |
| Conread position: | 2-398 |
| Cow position: | chrX:29813425-29813817 (view UCSC Genome Browser custom track) |
| Alignm length: | 419 |
| Alignm identity: | 291 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 56, 15 |
| Conread position: | 2-619 |
| Cow position: | chrX:26428332-26427674 (view UCSC Genome Browser custom track) |
| Alignm length: | 668 |
| Alignm identity: | 431 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 60, 300 |
| Conread position: | 2-681 |
| Cow position: | chrX:20796319-20797012 (view UCSC Genome Browser custom track) |
| Alignm length: | 721 |
| Alignm identity: | 463 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 57, 110 |
| Conread position: | 17-331 |
| Cow position: | chrX:15252225-15251912 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 219 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 120, 94 |
| Conread position: | 176-683 |
| Cow position: | chrX:13417902-13417381 (view UCSC Genome Browser custom track) |
| Alignm length: | 537 |
| Alignm identity: | 353 |
| Alignm E-value: | 9.00054e-42 |
| Alignm gaps (pig, cow): | 81, 196 |
| Conread position: | 252-683 |
| Cow position: | chrX:2013053-2012613 (view UCSC Genome Browser custom track) |
| Alignm length: | 456 |
| Alignm identity: | 295 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 92, 67 |
| Conread position: | 332-545 |
| Cow position: | chrX:6251195-6250966 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 166 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 25, 71 |
| Conread position: | 418-683 |
| Cow position: | chrX:29814628-29814890 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 198 |
| Alignm E-value: | 4.06377e-44 |
| Alignm gaps (pig, cow): | 109, 47 |
| Conread position: | 462-683 |
| Cow position: | chrX:24113000-24112786 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 153 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 187, 45 |
| Conread position: | 468-681 |
| Cow position: | chrX:10417479-10417273 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 163 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 180, 39 |
| Conread position: | 525-683 |
| Cow position: | chrX:41889072-41888916 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 128 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 123, 96 |
| Conread position: | 535-683 |
| Cow position: | chrX:6250543-6250398 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 121 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 102, 95 |