Cow genome map

Conread name: Emb2-UMC-pd12con-006-a10

Conread position: 1-171
Cow position: chr10:8996341-8996169 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 127
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 42, 47

Conread position: 1-171
Cow position: chr10:8996677-8996505 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 123
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 162, 0

Conread position: 1-176
Cow position: chr10:8996173-8995996 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 126
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 161, 0

Conread position: 15-161
Cow position: chr10:8996495-8996349 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 107
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 15-171
Cow position: chr10:8996831-8996673 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 118
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 147, 0

Conread position: 1-171
Cow position: chr11:74555020-74554850 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 117
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 1-161
Cow position: chr13:56292114-56291954 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 115
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 129, 119

Conread position: 1-171
Cow position: chr13:56292030-56291861 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 121
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 122, 132

Conread position: 1-157
Cow position: chr14:25794927-25794771 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 111
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 1-161
Cow position: chr14:25783515-25783675 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 116
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 1-161
Cow position: chr14:25783935-25784095 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 118
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 50, 55

Conread position: 1-161
Cow position: chr14:25784271-25784431 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 117
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 1-161
Cow position: chr14:25837058-25837218 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 113
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 1-169
Cow position: chr14:3155496-3155664 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 116
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 1-170
Cow position: chr14:25876742-25876913 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 122
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 53, 63

Conread position: 1-171
Cow position: chr14:25783599-25783771 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 126
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 162, 0

Conread position: 1-172
Cow position: chr14:25784019-25784192 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 124
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 161, 0

Conread position: 1-189
Cow position: chr14:25784355-25784545 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 136
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 162, 0

Conread position: 2-161
Cow position: chr14:25795262-25795103 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 116
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 6-161
Cow position: chr14:25794418-25794262 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 112
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 89, 0

Conread position: 9-161
Cow position: chr14:25784195-25784347 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 112
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 14-160
Cow position: chr14:3156577-3156723 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 106
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 14-161
Cow position: chr14:25783444-25783591 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 109
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 1-171
Cow position: chr16:14626994-14626822 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 123
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 162, 0

Conread position: 1-171
Cow position: chr16:14627162-14626990 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 130
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 158, 0

Conread position: 1-171
Cow position: chr16:14627750-14627580 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 123
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 49, 40

Conread position: 3-171
Cow position: chr16:14627076-14626906 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 119
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 160, 0

Conread position: 7-171
Cow position: chr16:14627660-14627496 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 117
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 9-171
Cow position: chr16:14627238-14627076 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 114
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 1-171
Cow position: chr17:22499224-22499052 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 120
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 158, 0

Conread position: 1-181
Cow position: chr17:22473757-22473940 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 129
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 158, 0

Conread position: 6-170
Cow position: chr17:22552592-22552426 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 122
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 120, 124

Conread position: 6-171
Cow position: chr17:22589926-22589761 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 119
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 156, 161

Conread position: 6-172
Cow position: chr17:22589842-22589678 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 123
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 157, 0

Conread position: 9-161
Cow position: chr17:22498796-22498644 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 108
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 14-171
Cow position: chr17:22590254-22590097 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 113
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 148, 153

Conread position: 21-171
Cow position: chr17:22552157-22552007 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 116
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 105, 112

Conread position: 1-143
Cow position: chr18:43119647-43119505 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 104
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 1-153
Cow position: chr18:43022815-43022663 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 115
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 126, 131

Conread position: 1-156
Cow position: chr18:43119731-43119576 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 116
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 1-160
Cow position: chr18:33064094-33063935 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 116
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 63, 56

Conread position: 1-160
Cow position: chr18:33064262-33064103 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 117
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 63, 57

Conread position: 1-160
Cow position: chr18:42674981-42674822 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 118
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 1-160
Cow position: chr18:42837344-42837185 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 120
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 1-160
Cow position: chr18:42837512-42837353 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 116
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 1-160
Cow position: chr18:43048724-43048565 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 122
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 1-160
Cow position: chr18:43053371-43053212 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 114
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 51, 57

Conread position: 1-160
Cow position: chr18:43119983-43119824 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 119
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 138, 123

Conread position: 1-160
Cow position: chr18:43175268-43175109 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 117
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 1-160
Cow position: chr18:44184126-44183967 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 112
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 1-160
Cow position: chr18:44184294-44184135 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 114
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 125, 134

Conread position: 1-160
Cow position: chr18:53509326-53509485 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 112
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 1-161
Cow position: chr18:40324712-40324552 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 115
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 108, 102

Conread position: 1-161
Cow position: chr18:41197747-41197907 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 120
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 125, 133

Conread position: 1-161
Cow position: chr18:41198167-41198327 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 116
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 1-161
Cow position: chr18:41948756-41948596 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 117
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 1-161
Cow position: chr18:41948840-41948680 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 120
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 126, 137

Conread position: 1-161
Cow position: chr18:42674897-42674737 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 114
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 1-161
Cow position: chr18:42744041-42743881 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 117
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 1-161
Cow position: chr18:42744209-42744049 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 116
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 1-161
Cow position: chr18:42791136-42791296 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 115
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 53, 63

Conread position: 1-161
Cow position: chr18:42959632-42959472 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 116
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 1-161
Cow position: chr18:42960211-42960051 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 114
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 1-161
Cow position: chr18:42984884-42984724 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 112
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 1-161
Cow position: chr18:42985052-42984892 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 118
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 52, 43

Conread position: 1-161
Cow position: chr18:42985136-42984976 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 121
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 136, 127

Conread position: 1-161
Cow position: chr18:42985220-42985060 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 114
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 1-161
Cow position: chr18:43022227-43022067 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 120
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 1-161
Cow position: chr18:43022395-43022235 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 115
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 131, 125

Conread position: 1-161
Cow position: chr18:43022563-43022403 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 117
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 52, 43

Conread position: 1-161
Cow position: chr18:43022983-43022823 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 114
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 1-161
Cow position: chr18:43023067-43022907 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 112
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 1-161
Cow position: chr18:43048640-43048480 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 122
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 23, 18

Conread position: 1-161
Cow position: chr18:43092994-43092834 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 124
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 38, 47

Conread position: 1-161
Cow position: chr18:43093246-43093086 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 115
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 52, 48

Conread position: 1-161
Cow position: chr18:43119899-43119739 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 119
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 42, 53

Conread position: 1-161
Cow position: chr18:43120235-43120075 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 114
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 1-161
Cow position: chr18:43174680-43174520 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 114
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 1-161
Cow position: chr18:43174764-43174604 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 116
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 107, 103

Conread position: 1-161
Cow position: chr18:43174932-43174772 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 113
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 1-161
Cow position: chr18:43175184-43175024 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 121
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 41, 54

Conread position: 1-161
Cow position: chr18:44184210-44184050 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 117
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 51, 57

Conread position: 1-161
Cow position: chr18:44184462-44184302 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 114
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 1-161
Cow position: chr18:44184630-44184470 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 113
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 1-161
Cow position: chr18:44184798-44184638 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 113
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 1-161
Cow position: chr18:44184882-44184722 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 116
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 141, 129

Conread position: 1-161
Cow position: chr18:44239761-44239921 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 122
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 126, 137

Conread position: 1-161
Cow position: chr18:44240265-44240425 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 114
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 1-161
Cow position: chr18:44240433-44240593 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 113
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 1-161
Cow position: chr18:44397763-44397603 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 113
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 1-161
Cow position: chr18:44398099-44397939 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 118
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 1-161
Cow position: chr18:51969429-51969589 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 117
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 49, 41

Conread position: 1-161
Cow position: chr18:52427805-52427965 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 113
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 1-161
Cow position: chr18:52427889-52428049 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 117
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 58, 51

Conread position: 1-161
Cow position: chr18:52427973-52428133 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 118
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 123, 134

Conread position: 1-161
Cow position: chr18:52428057-52428217 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 124
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 48, 39

Conread position: 1-161
Cow position: chr18:52428141-52428301 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 114
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 1-161
Cow position: chr18:52428225-52428385 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 118
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 123, 134

Conread position: 1-161
Cow position: chr18:52428309-52428469 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 121
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 39, 55

Conread position: 1-161
Cow position: chr18:52428393-52428553 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 114
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 1-161
Cow position: chr18:52428477-52428637 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 114
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 1-161
Cow position: chr18:52428561-52428721 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 113
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 1-161
Cow position: chr18:52428645-52428805 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 116
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 1-161
Cow position: chr18:52433154-52433314 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 112
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 1-161
Cow position: chr18:52433238-52433398 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 119
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 58, 51

Conread position: 1-161
Cow position: chr18:52433322-52433482 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 115
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 1-161
Cow position: chr18:52433406-52433566 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 116
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 1-161
Cow position: chr18:52433490-52433650 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 123
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 48, 40

Conread position: 1-161
Cow position: chr18:52433574-52433734 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 114
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 1-161
Cow position: chr18:52433658-52433818 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 114
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 1-161
Cow position: chr18:52433826-52433986 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 115
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 1-161
Cow position: chr18:52447868-52448028 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 116
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 1-161
Cow position: chr18:52448120-52448280 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 118
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 1-162
Cow position: chr18:40086510-40086349 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 118
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 1-162
Cow position: chr18:51367507-51367346 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 124
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 126, 131

Conread position: 1-170
Cow position: chr18:40086932-40086762 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 119
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 157, 0

Conread position: 1-170
Cow position: chr18:42985388-42985217 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 126
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 138, 125

Conread position: 1-170
Cow position: chr18:52447448-52447619 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 125
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 125, 131

Conread position: 1-170
Cow position: chr18:52447700-52447871 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 127
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 125, 131

Conread position: 1-171
Cow position: chr18:14453284-14453112 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 124
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 63, 50

Conread position: 1-171
Cow position: chr18:40085932-40085760 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 131
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 125, 138

Conread position: 1-171
Cow position: chr18:40324796-40324624 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 125
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 155, 0

Conread position: 1-171
Cow position: chr18:41197579-41197751 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 125
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 162, 0

Conread position: 1-171
Cow position: chr18:41197915-41198087 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 123
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 122, 130

Conread position: 1-171
Cow position: chr18:41197999-41198171 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 126
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 38, 47

Conread position: 1-171
Cow position: chr18:41198083-41198253 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 120
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 1-171
Cow position: chr18:41198587-41198759 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 125
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 38, 47

Conread position: 1-171
Cow position: chr18:41949008-41948836 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 125
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 126, 132

Conread position: 1-171
Cow position: chr18:42674645-42674475 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 123
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 122, 129

Conread position: 1-171
Cow position: chr18:42674729-42674557 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 120
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 162, 0

Conread position: 1-171
Cow position: chr18:42675065-42674893 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 133
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 162, 0

Conread position: 1-171
Cow position: chr18:42675149-42674977 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 125
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 158, 0

Conread position: 1-171
Cow position: chr18:42675233-42675061 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 122
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 161, 0

Conread position: 1-171
Cow position: chr18:42744293-42744121 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 125
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 53, 63

Conread position: 1-171
Cow position: chr18:42744461-42744289 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 129
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 162, 0

Conread position: 1-171
Cow position: chr18:42837428-42837258 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 125
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 162, 166

Conread position: 1-171
Cow position: chr18:42837680-42837508 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 128
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 162, 0

Conread position: 1-171
Cow position: chr18:42984800-42984628 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 129
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 162, 0

Conread position: 1-171
Cow position: chr18:43093330-43093158 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 127
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 126, 137

Conread position: 1-171
Cow position: chr18:43093414-43093242 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 121
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 158, 0

Conread position: 1-171
Cow position: chr18:43093498-43093326 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 125
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 124, 132

Conread position: 1-171
Cow position: chr18:43119815-43119643 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 125
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 162, 0

Conread position: 1-171
Cow position: chr18:43168048-43168220 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 126
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 124, 132

Conread position: 1-171
Cow position: chr18:43168132-43168304 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 122
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 161, 0

Conread position: 1-171
Cow position: chr18:44397931-44397759 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 124
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 162, 0

Conread position: 1-171
Cow position: chr18:44398015-44397845 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 122
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 1-171
Cow position: chr18:44398351-44398181 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 121
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 1-171
Cow position: chr18:51789553-51789381 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 122
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 123, 137

Conread position: 1-171
Cow position: chr18:51812712-51812540 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 122
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 162, 0

Conread position: 1-171
Cow position: chr18:51969838-51970010 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 125
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 162, 0

Conread position: 1-171
Cow position: chr18:52447028-52447200 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 125
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 162, 0

Conread position: 1-171
Cow position: chr18:52447952-52448124 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 129
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 55, 51

Conread position: 1-171
Cow position: chr18:52448036-52448208 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 131
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 162, 0

Conread position: 1-171
Cow position: chr18:52448204-52448377 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 123
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 84, 0

Conread position: 1-172
Cow position: chr18:42791892-42792065 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 121
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 162, 0

Conread position: 1-172
Cow position: chr18:42960295-42960122 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 123
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 162, 0

Conread position: 1-172
Cow position: chr18:44184714-44184541 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 123
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 162, 0

Conread position: 1-172
Cow position: chr18:52447616-52447789 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 123
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 162, 0

Conread position: 1-173
Cow position: chr18:51751911-51751737 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 121
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 162, 0

Conread position: 1-173
Cow position: chr18:51752163-51751989 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 126
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 123, 129

Conread position: 1-174
Cow position: chr18:42674561-42674388 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 122
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 47, 29

Conread position: 1-175
Cow position: chr18:43168216-43168392 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 131
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 55, 51

Conread position: 1-176
Cow position: chr18:52428729-52428907 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 128
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 162, 0

Conread position: 1-176
Cow position: chr18:52433910-52434088 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 126
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 162, 0

Conread position: 1-177
Cow position: chr18:40324124-40323946 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 136
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 164, 0

Conread position: 1-188
Cow position: chr18:44240517-44240706 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 131
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 129, 111

Conread position: 2-171
Cow position: chr18:33093101-33092930 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 122
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 157, 0

Conread position: 3-161
Cow position: chr18:41948922-41948764 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 121
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 3-161
Cow position: chr18:42827746-42827904 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 115
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 120, 131

Conread position: 3-161
Cow position: chr18:52433744-52433902 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 111
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 3-171
Cow position: chr18:33092848-33092678 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 122
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 143, 139

Conread position: 5-161
Cow position: chr18:42985300-42985144 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 121
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 48, 39

Conread position: 5-162
Cow position: chr18:41948584-41948427 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 115
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 5-166
Cow position: chr18:40307185-40307348 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 116
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 147, 0

Conread position: 5-171
Cow position: chr18:33064006-33063838 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 125
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 158, 0

Conread position: 6-160
Cow position: chr18:42744540-42744386 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 116
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 6-160
Cow position: chr18:42837591-42837437 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 110
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 6-160
Cow position: chr18:42837759-42837605 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 120
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 6-160
Cow position: chr18:43174843-43174689 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 113
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 121, 125

Conread position: 6-161
Cow position: chr18:42743952-42743797 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 116
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 6-161
Cow position: chr18:43022306-43022151 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 119
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 42, 37

Conread position: 6-161
Cow position: chr18:43120062-43119907 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 112
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 45, 27

Conread position: 6-161
Cow position: chr18:43175011-43174856 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 116
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 6-161
Cow position: chr18:43175095-43174940 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 116
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 6-161
Cow position: chr18:44154274-44154119 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 111
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 6-161
Cow position: chr18:44184373-44184218 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 113
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 6-161
Cow position: chr18:44253546-44253391 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 110
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 6-161
Cow position: chr18:44253798-44253643 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 118
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 6-170
Cow position: chr18:40306682-40306848 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 118
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 157, 0

Conread position: 6-170
Cow position: chr18:44397842-44397676 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 119
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 157, 0

Conread position: 6-171
Cow position: chr18:14453195-14453030 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 115
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 6-171
Cow position: chr18:44153620-44153454 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 123
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 46, 27

Conread position: 6-173
Cow position: chr18:51789128-51788959 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 120
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 157, 0

Conread position: 6-173
Cow position: chr18:51812371-51812202 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 123
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 157, 0

Conread position: 6-174
Cow position: chr18:14453027-14452857 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 122
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 157, 0

Conread position: 6-182
Cow position: chr18:41198340-41198517 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 125
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 157, 169

Conread position: 7-160
Cow position: chr18:42837926-42837773 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 109
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 7-171
Cow position: chr18:43168390-43168554 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 116
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 7-182
Cow position: chr18:50098985-50099161 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 121
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 164, 0

Conread position: 8-160
Cow position: chr18:42837841-42837689 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 114
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 8-161
Cow position: chr18:40324537-40324384 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 110
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 8-161
Cow position: chr18:43022640-43022487 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 113
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 131, 118

Conread position: 8-171
Cow position: chr18:40324873-40324708 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 120
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 150, 0

Conread position: 8-172
Cow position: chr18:44253628-44253462 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 119
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 155, 0

Conread position: 9-160
Cow position: chr18:44253711-44253560 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 117
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 9-161
Cow position: chr18:42744621-42744469 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 117
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 9-170
Cow position: chr18:52447540-52447703 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 125
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 34, 39

Conread position: 9-171
Cow position: chr18:51812788-51812624 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 117
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 154, 0

Conread position: 9-171
Cow position: chr18:52447792-52447956 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 128
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 34, 39

Conread position: 9-172
Cow position: chr18:52447372-52447537 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 118
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 154, 0

Conread position: 10-171
Cow position: chr18:51789628-51789465 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 116
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 153, 0

Conread position: 10-182
Cow position: chr18:51969354-51969527 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 125
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 40, 33

Conread position: 11-177
Cow position: chr18:51873798-51873966 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 123
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 41, 58

Conread position: 14-160
Cow position: chr18:43175591-43175445 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 108
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 113, 119

Conread position: 14-171
Cow position: chr18:41949331-41949172 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 120
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 149, 0

Conread position: 14-171
Cow position: chr18:42744364-42744205 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 115
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 149, 0

Conread position: 14-171
Cow position: chr18:42791653-42791810 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 117
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 111, 119

Conread position: 14-171
Cow position: chr18:44398422-44398265 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 112
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 14-172
Cow position: chr18:43022130-43021972 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 113
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 21-161
Cow position: chr18:43053435-43053295 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 102
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 23-171
Cow position: chr18:40324186-40324038 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 110
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 1-124
Cow position: chr19:20678459-20678582 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 95
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 1-156
Cow position: chr19:23613856-23614011 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 113
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 1-160
Cow position: chr19:23614276-23614435 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 115
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 1-161
Cow position: chr19:23614780-23614940 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 115
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 1-171
Cow position: chr19:14940244-14940414 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 134
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 162, 167

Conread position: 1-171
Cow position: chr19:14940328-14940498 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 123
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 1-171
Cow position: chr19:14940664-14940836 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 126
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 162, 0

Conread position: 1-171
Cow position: chr19:14960053-14959881 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 127
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 47, 40

Conread position: 1-171
Cow position: chr19:14960137-14959965 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 121
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 157, 0

Conread position: 1-171
Cow position: chr19:23613688-23613860 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 130
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 162, 0

Conread position: 1-171
Cow position: chr19:23613940-23614110 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 127
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 50, 57

Conread position: 1-171
Cow position: chr19:23614612-23614784 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 127
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 125, 134

Conread position: 1-171
Cow position: chr19:23614696-23614866 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 124
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 1-358
Cow position: chr19:23614948-23615326 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 209, 269

Conread position: 5-160
Cow position: chr19:20678295-20678450 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 110
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 5-170
Cow position: chr19:14939996-14940163 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 120
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 158, 0

Conread position: 5-171
Cow position: chr19:20677791-20677959 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 122
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 121, 126

Conread position: 6-161
Cow position: chr19:23614533-23614688 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 118
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 6-170
Cow position: chr19:23613777-23613943 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 130
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 157, 0

Conread position: 6-171
Cow position: chr19:14940585-14940752 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 117
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 153, 0

Conread position: 6-171
Cow position: chr19:23614029-23614196 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 129
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 157, 0

Conread position: 6-171
Cow position: chr19:23614113-23614280 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 128
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 157, 0

Conread position: 6-171
Cow position: chr19:23614449-23614616 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 132
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 157, 0

Conread position: 6-171
Cow position: chr19:23614869-23615034 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 115
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 7-161
Cow position: chr19:20635203-20635049 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 111
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 7-171
Cow position: chr19:14960381-14960215 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 126
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 41, 34

Conread position: 7-171
Cow position: chr19:14960465-14960299 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 118
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 156, 0

Conread position: 9-171
Cow position: chr19:20678215-20678379 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 118
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 149, 0

Conread position: 9-171
Cow position: chr19:43569960-43569796 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 120
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 154, 0

Conread position: 1-171
Cow position: chr2:78755002-78755174 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 120
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 162, 0

Conread position: 1-171
Cow position: chr2:78755170-78755341 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 122
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 125, 137

Conread position: 1-171
Cow position: chr2:78756175-78756345 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 124
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 162, 134

Conread position: 3-171
Cow position: chr2:82799530-82799698 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 116
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 6-160
Cow position: chr2:78754839-78754993 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 112
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 7-171
Cow position: chr2:78755092-78755258 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 119
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 147, 0

Conread position: 7-172
Cow position: chr2:78755510-78755675 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 118
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 122, 131

Conread position: 1-154
Cow position: chr22:12475967-12475814 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 110
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 1-156
Cow position: chr22:12458018-12457863 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 119
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 126, 139

Conread position: 1-160
Cow position: chr22:11640860-11641019 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 115
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 50, 62

Conread position: 1-160
Cow position: chr22:12399002-12398843 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 118
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 125, 131

Conread position: 1-160
Cow position: chr22:12399674-12399515 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 114
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 1-160
Cow position: chr22:12431402-12431243 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 114
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 1-160
Cow position: chr22:12431654-12431495 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 114
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 53, 42

Conread position: 1-160
Cow position: chr22:12458606-12458447 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 120
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 49, 42

Conread position: 1-170
Cow position: chr22:12385328-12385157 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 122
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 147, 142

Conread position: 1-170
Cow position: chr22:12499796-12499967 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 121
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 157, 0

Conread position: 1-171
Cow position: chr22:12399338-12399168 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 127
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 162, 166

Conread position: 1-171
Cow position: chr22:12431066-12430896 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 117
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 1-171
Cow position: chr22:12499292-12499461 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 121
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 161, 0

Conread position: 1-171
Cow position: chr22:12499712-12499884 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 120
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 162, 0

Conread position: 3-171
Cow position: chr22:12399840-12399670 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 122
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 156, 0

Conread position: 5-161
Cow position: chr22:12475627-12475471 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 120
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 5-161
Cow position: chr22:12499632-12499788 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 114
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 6-156
Cow position: chr22:12399081-12398931 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 107
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 6-161
Cow position: chr22:12385407-12385252 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 113
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 45, 35

Conread position: 6-170
Cow position: chr22:12475458-12475292 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 117
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 157, 0

Conread position: 6-171
Cow position: chr22:12399753-12399588 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 117
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 6-171
Cow position: chr22:12475542-12475375 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 122
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 45, 52

Conread position: 6-188
Cow position: chr22:12399417-12399233 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 133
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 173, 0

Conread position: 7-160
Cow position: chr22:12430976-12430823 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 111
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 7-171
Cow position: chr22:12458348-12458185 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 121
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 155, 0

Conread position: 1-156
Cow position: chr23:24560552-24560397 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 118
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 1-160
Cow position: chr23:24560636-24560477 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 114
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 1-160
Cow position: chr23:24626310-24626469 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 116
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 1-160
Cow position: chr23:24639890-24640049 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 113
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 1-160
Cow position: chr23:25626701-25626860 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 113
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 1-161
Cow position: chr23:25723957-25723797 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 112
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 1-168
Cow position: chr23:25626785-25626952 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 119
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 1-170
Cow position: chr23:24547076-24546905 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 123
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 161, 0

Conread position: 1-171
Cow position: chr23:24535791-24535621 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 122
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 1-171
Cow position: chr23:24546908-24546736 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 123
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 162, 0

Conread position: 1-171
Cow position: chr23:24547160-24546988 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 126
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 161, 0

Conread position: 1-171
Cow position: chr23:24547244-24547072 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 123
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 57, 51

Conread position: 1-171
Cow position: chr23:24560384-24560212 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 126
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 161, 0

Conread position: 1-171
Cow position: chr23:24560468-24560298 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 124
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 1-171
Cow position: chr23:24626394-24626566 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 124
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 162, 0

Conread position: 1-171
Cow position: chr23:24626478-24626650 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 125
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 129, 124

Conread position: 1-171
Cow position: chr23:24626562-24626732 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 128
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 1-171
Cow position: chr23:25660237-25660406 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 121
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 153, 149

Conread position: 3-171
Cow position: chr23:24560298-24560130 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 128
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 163, 159

Conread position: 5-160
Cow position: chr23:24654123-24654278 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 111
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 6-141
Cow position: chr23:24522309-24522174 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 101
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 6-174
Cow position: chr23:24654208-24654378 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 122
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 124, 108

Conread position: 8-160
Cow position: chr23:24654042-24654194 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 112
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 8-160
Cow position: chr23:25626543-25626692 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 110
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 41, 0

Conread position: 8-171
Cow position: chr23:24535868-24535703 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 116
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 151, 0

Conread position: 9-160
Cow position: chr23:24547320-24547169 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 113
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 39, 21

Conread position: 1-160
Cow position: chr24:17035957-17035798 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 114
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 1-161
Cow position: chr24:17077756-17077596 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 115
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 147, 142

Conread position: 1-170
Cow position: chr24:17070544-17070715 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 125
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 158, 0

Conread position: 1-171
Cow position: chr24:17035705-17035533 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 126
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 161, 0

Conread position: 1-171
Cow position: chr24:17035789-17035617 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 121
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 158, 0

Conread position: 1-171
Cow position: chr24:17036041-17035869 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 128
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 158, 0

Conread position: 1-171
Cow position: chr24:17036461-17036291 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 122
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 162, 166

Conread position: 1-171
Cow position: chr24:17070712-17070884 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 127
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 158, 0

Conread position: 1-171
Cow position: chr24:17077924-17077752 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 120
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 162, 0

Conread position: 1-174
Cow position: chr24:17070880-17071055 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 128
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 147, 142

Conread position: 3-160
Cow position: chr24:17077838-17077681 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 113
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 6-161
Cow position: chr24:17070633-17070788 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 111
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 6-170
Cow position: chr24:17036372-17036206 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 121
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 157, 0

Conread position: 8-160
Cow position: chr24:17070803-17070955 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 109
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 10-171
Cow position: chr24:17013174-17013335 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 116
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 138, 130

Conread position: 11-171
Cow position: chr24:17077998-17077838 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 115
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 152, 156

Conread position: 1-156
Cow position: chr25:34769787-34769632 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 118
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 1-160
Cow position: chr25:33157052-33156893 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 114
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 1-170
Cow position: chr25:23420384-23420555 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 121
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 162, 0

Conread position: 1-170
Cow position: chr25:33127971-33128142 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 124
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 158, 0

Conread position: 1-170
Cow position: chr25:33157220-33157049 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 122
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 158, 0

Conread position: 1-171
Cow position: chr25:23420552-23420724 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 124
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 157, 0

Conread position: 1-171
Cow position: chr25:33127803-33127975 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 123
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 161, 0

Conread position: 1-171
Cow position: chr25:33127887-33128057 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 120
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 1-171
Cow position: chr25:34769451-34769281 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 121
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 162, 166

Conread position: 1-171
Cow position: chr25:34769619-34769447 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 125
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 42, 48

Conread position: 3-160
Cow position: chr25:33157470-33157313 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 116
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 47, 38

Conread position: 3-170
Cow position: chr25:33127722-33127890 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 120
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 159, 7

Conread position: 6-156
Cow position: chr25:34769698-34769548 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 108
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 6-171
Cow position: chr25:23420473-23420638 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 123
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 15-170
Cow position: chr25:33157122-33156965 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 112
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 144, 0

Conread position: 21-171
Cow position: chr25:34770103-34769951 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 116
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 22, 27

Conread position: 1-171
Cow position: chr27:21615686-21615515 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 122
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 162, 120

Conread position: 6-161
Cow position: chr27:21615765-21615610 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 110
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 1-160
Cow position: chr28:7757585-7757744 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 114
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 111, 132

Conread position: 1-160
Cow position: chr28:9253440-9253599 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 116
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 1-170
Cow position: chr28:7810592-7810763 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 122
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 122, 132

Conread position: 1-170
Cow position: chr28:9298818-9298989 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 122
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 161, 0

Conread position: 1-171
Cow position: chr28:7757417-7757589 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 128
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 122, 129

Conread position: 1-171
Cow position: chr28:7757669-7757841 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 125
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 162, 0

Conread position: 1-171
Cow position: chr28:9253104-9253276 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 123
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 122, 132

Conread position: 1-171
Cow position: chr28:9253272-9253444 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 125
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 157, 0

Conread position: 1-171
Cow position: chr28:9253356-9253528 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 125
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 122, 129

Conread position: 1-182
Cow position: chr28:11334136-11333954 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 127
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 112, 131

Conread position: 5-154
Cow position: chr28:7758413-7758562 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 113
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 5-160
Cow position: chr28:7758497-7758652 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 109
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 0, 0

Conread position: 6-171
Cow position: chr28:9253193-9253360 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 123
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 156, 0

Conread position: 7-171
Cow position: chr28:7810355-7810521 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 123
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 24, 38

Conread position: 11-169
Cow position: chr28:34679549-34679389 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 117
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 53, 42

Conread position: 15-171
Cow position: chr28:9253034-9253190 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 115
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 111, 119

Conread position: 1-161
Cow position: chr29:39627090-39626930 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 119
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 1-161
Cow position: chr29:39627423-39627263 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 112
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 5-171
Cow position: chr29:39627170-39627002 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 126
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 49, 40

Conread position: 1-161
Cow position: chr3:62722156-62721996 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 121
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 1-161
Cow position: chr3:68027093-68027253 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 112
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 1-170
Cow position: chr3:62721820-62721649 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 122
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 162, 0

Conread position: 1-171
Cow position: chr3:62721904-62721734 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 122
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 1-171
Cow position: chr3:62742778-62742951 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 129
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 41, 46

Conread position: 1-171
Cow position: chr3:77350743-77350576 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 121
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 46, 0

Conread position: 2-171
Cow position: chr3:62722323-62722152 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 124
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 156, 0

Conread position: 3-169
Cow position: chr3:77350909-77350743 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 118
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 61, 49

Conread position: 5-171
Cow position: chr3:62722236-62722070 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 121
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 6-170
Cow position: chr3:62721983-62721817 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 121
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 58, 46

Conread position: 7-161
Cow position: chr3:62743183-62743337 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 112
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 35, 40

Conread position: 9-161
Cow position: chr3:16020370-16020218 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 111
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 116, 122

Conread position: 24-172
Cow position: chr3:68046213-68046359 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 109
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 138, 0

Conread position: 24-176
Cow position: chr3:68027620-68027774 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 114
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 126, 0

Conread position: 5-171
Cow position: chr6:49341165-49341333 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 118
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 158, 0

Conread position: 6-171
Cow position: chr6:49341082-49341249 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 122
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 157, 0

Conread position: 1-160
Cow position: chr7:3180118-3180277 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 114
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 51, 55

Conread position: 1-161
Cow position: chr7:1014442-1014602 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 115
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 1-161
Cow position: chr7:3179782-3179942 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 115
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 58, 50

Conread position: 1-161
Cow position: chr7:11600766-11600606 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 117
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 1-161
Cow position: chr7:42878435-42878275 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 113
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 1-166
Cow position: chr7:11600598-11600433 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 118
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 1-171
Cow position: chr7:1015024-1015196 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 132
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 55, 41

Conread position: 1-171
Cow position: chr7:1015192-1015362 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 120
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 49, 33

Conread position: 1-171
Cow position: chr7:3179866-3180036 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 126
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 57, 43

Conread position: 1-171
Cow position: chr7:3179950-3180122 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 129
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 125, 130

Conread position: 1-171
Cow position: chr7:3180202-3180372 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 119
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 1-171
Cow position: chr7:3180286-3180458 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 127
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 162, 0

Conread position: 1-171
Cow position: chr7:3180454-3180626 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 122
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 162, 0

Conread position: 1-171
Cow position: chr7:3180538-3180708 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 123
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 47, 40

Conread position: 1-171
Cow position: chr7:3180622-3180792 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 123
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 1-171
Cow position: chr7:18390247-18390416 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 120
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 161, 0

Conread position: 1-171
Cow position: chr7:42878603-42878431 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 124
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 122, 132

Conread position: 1-171
Cow position: chr7:42878687-42878517 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 122
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 161, 166

Conread position: 1-171
Cow position: chr7:42879107-42878935 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 126
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 122, 132

Conread position: 5-171
Cow position: chr7:3180038-3180206 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 118
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 158, 0

Conread position: 5-175
Cow position: chr7:3180710-3180881 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 127
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 51, 46

Conread position: 6-171
Cow position: chr7:42879186-42879021 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 117
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 14-171
Cow position: chr7:11601173-11601014 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 117
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 151, 0

Conread position: 1-156
Cow position: chr8:45201439-45201594 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 116
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 125, 132

Conread position: 1-160
Cow position: chr8:48407293-48407134 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 115
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 112, 120

Conread position: 1-161
Cow position: chr8:6957995-6957835 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 113
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 1-161
Cow position: chr8:45201103-45201263 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 114
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 1-171
Cow position: chr8:45201691-45201863 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 122
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 157, 0

Conread position: 1-171
Cow position: chr8:46816046-46816218 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 121
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 162, 0

Conread position: 1-171
Cow position: chr8:46816886-46817058 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 122
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 162, 0

Conread position: 1-171
Cow position: chr8:55581243-55581413 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 126
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 147, 129

Conread position: 1-172
Cow position: chr8:45201775-45201945 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 122
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 162, 0

Conread position: 3-170
Cow position: chr8:48406955-48406786 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 129
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 50, 40

Conread position: 3-171
Cow position: chr8:48407123-48406955 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 125
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 47, 41

Conread position: 6-160
Cow position: chr8:46816135-46816289 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 110
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 6-171
Cow position: chr8:45201528-45201695 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 125
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 152, 0

Conread position: 6-171
Cow position: chr8:45201612-45201779 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 124
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 120, 127

Conread position: 6-171
Cow position: chr8:55581080-55581247 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 121
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 157, 0

Conread position: 6-171
Cow position: chr8:55581164-55581329 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 116
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 6-175
Cow position: chr8:48406448-48406276 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 124
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 120, 130

Conread position: 14-160
Cow position: chr8:48407532-48407386 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 108
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 1-169
Cow position: chrX:25309807-25309977 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 125
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 161, 0

Conread position: 1-169
Cow position: chrX:29045091-29044921 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 128
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 18, 24

Conread position: 1-171
Cow position: chrX:25309891-25310063 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 125
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 125, 133

Conread position: 1-171
Cow position: chrX:25325334-25325164 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 121
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 162, 166

Conread position: 1-171
Cow position: chrX:29044923-29044751 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 126
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 57, 51

Conread position: 1-171
Cow position: chrX:29045742-29045572 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 122
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 125, 132

Conread position: 6-171
Cow position: chrX:29045002-29044837 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 120
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 157, 161

Conread position: 6-241
Cow position: chrX:29044834-29044596 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 162
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 50, 46

Conread position: 14-170
Cow position: chrX:25309736-25309894 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 117
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 144, 0