Cow genome map


           Conread name:
           End3-UMC-pd6end1-002-b04
        

               Conread position:
               16-118
               

               Cow position:
               chr13:42250551-42250652 (view UCSC Genome Browser custom track)
               

               Alignm length:
               103
               

               Alignm identity:
               90
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               39, 0
               

               Conread position:
               272-485
               

               Cow position:
               chr15:41086848-41086637 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               180
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               107, 138
               

               Conread position:
               1-118
               

               Cow position:
               chr2:48360700-48360583 (view UCSC Genome Browser custom track)
               

               Alignm length:
               119
               

               Alignm identity:
               95
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               54, 18
               

               Conread position:
               6-117
               

               Cow position:
               chr2:1202169-1202058 (view UCSC Genome Browser custom track)
               

               Alignm length:
               112
               

               Alignm identity:
               90
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               13-118
               

               Cow position:
               chr2:32409503-32409609 (view UCSC Genome Browser custom track)
               

               Alignm length:
               107
               

               Alignm identity:
               89
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               272-473
               

               Cow position:
               chr3:24439216-24439417 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               145
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               65, 152
               

               Conread position:
               1-118
               

               Cow position:
               chr8:1018164-1018284 (view UCSC Genome Browser custom track)
               

               Alignm length:
               121
               

               Alignm identity:
               95
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               1-118
               

               Cow position:
               chrX:11991136-11991252 (view UCSC Genome Browser custom track)
               

               Alignm length:
               118
               

               Alignm identity:
               96
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               41, 0