Cow genome map

Conread name: Fet1-UMC-pd20fet-003-d09

Conread position: 260-394
Cow position: chr1:80305743-80305614 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 105
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 70, 0

Conread position: 284-383
Cow position: chr1:3904433-3904333 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 87
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 53, 81

Conread position: 288-392
Cow position: chr1:44986650-44986754 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 91
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 290-394
Cow position: chr1:83463704-83463809 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 87
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 73, 0

Conread position: 298-391
Cow position: chr1:78690337-78690430 (view UCSC Genome Browser custom track)
Alignm length: 94
Alignm identity: 80
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 303-394
Cow position: chr1:61030891-61030982 (view UCSC Genome Browser custom track)
Alignm length: 92
Alignm identity: 78
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 284-394
Cow position: chr10:41760221-41760117 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 96
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 84, 0

Conread position: 284-394
Cow position: chr11:70745436-70745323 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 93
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 35, 0

Conread position: 286-394
Cow position: chr11:44234442-44234550 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 88
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 291-394
Cow position: chr11:40572980-40572877 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 94
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 301-390
Cow position: chr11:51743205-51743293 (view UCSC Genome Browser custom track)
Alignm length: 90
Alignm identity: 78
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 36, 0

Conread position: 283-395
Cow position: chr12:44544235-44544125 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 90
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 39, 0

Conread position: 284-381
Cow position: chr13:5082512-5082415 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 81
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 285-394
Cow position: chr13:27170569-27170678 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 91
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 301-391
Cow position: chr13:52880996-52881086 (view UCSC Genome Browser custom track)
Alignm length: 91
Alignm identity: 77
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 280-394
Cow position: chr15:1984263-1984147 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 92
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 58, 0

Conread position: 284-389
Cow position: chr15:48590273-48590378 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 86
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 285-391
Cow position: chr15:10723160-10723266 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 86
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 273-394
Cow position: chr16:17424864-17424741 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 96
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 65, 0

Conread position: 261-394
Cow position: chr17:29157554-29157688 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 108
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 107, 0

Conread position: 283-394
Cow position: chr17:23882835-23882724 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 88
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 289-394
Cow position: chr17:21604582-21604687 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 86
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 295-394
Cow position: chr17:4472378-4472281 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 86
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 42, 0

Conread position: 305-392
Cow position: chr17:35127117-35127204 (view UCSC Genome Browser custom track)
Alignm length: 88
Alignm identity: 78
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 297-394
Cow position: chr18:7214620-7214717 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 83
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 286-390
Cow position: chr19:49818152-49818256 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 85
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 299-391
Cow position: chr19:53405732-53405640 (view UCSC Genome Browser custom track)
Alignm length: 93
Alignm identity: 80
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 14-272
Cow position: chr2:6797609-6797873 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 245

Conread position: 284-394
Cow position: chr2:69793746-69793636 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 93
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 289-394
Cow position: chr2:59817954-59817849 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 90
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 297-394
Cow position: chr2:11659058-11658961 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 83
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 284-388
Cow position: chr20:1106636-1106531 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 86
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 44, 0

Conread position: 285-394
Cow position: chr20:31799039-31798930 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 89
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 300-394
Cow position: chr20:1009290-1009197 (view UCSC Genome Browser custom track)
Alignm length: 95
Alignm identity: 83
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 77, 0

Conread position: 301-395
Cow position: chr20:20242249-20242344 (view UCSC Genome Browser custom track)
Alignm length: 96
Alignm identity: 82
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 52, 0

Conread position: 269-391
Cow position: chr21:396337-396459 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 93
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 293-380
Cow position: chr21:13940434-13940347 (view UCSC Genome Browser custom track)
Alignm length: 88
Alignm identity: 78
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 299-394
Cow position: chr21:29014377-29014282 (view UCSC Genome Browser custom track)
Alignm length: 96
Alignm identity: 80
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 297-394
Cow position: chr22:23077386-23077289 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 81
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 301-394
Cow position: chr22:10030983-10030890 (view UCSC Genome Browser custom track)
Alignm length: 94
Alignm identity: 83
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 304-391
Cow position: chr22:43743224-43743137 (view UCSC Genome Browser custom track)
Alignm length: 88
Alignm identity: 80
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 281-394
Cow position: chr23:18605040-18604926 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 96
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 87, 0

Conread position: 284-389
Cow position: chr23:39781603-39781702 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 89
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 52, 0

Conread position: 287-394
Cow position: chr23:16076045-16075941 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 88
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 81, 0

Conread position: 281-391
Cow position: chr24:34008185-34008075 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 87
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 286-394
Cow position: chr24:38114761-38114653 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 90
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 58, 53

Conread position: 303-394
Cow position: chr24:43200181-43200090 (view UCSC Genome Browser custom track)
Alignm length: 92
Alignm identity: 78
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 284-394
Cow position: chr25:40931397-40931508 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 91
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 36, 0

Conread position: 298-394
Cow position: chr25:13822540-13822634 (view UCSC Genome Browser custom track)
Alignm length: 97
Alignm identity: 83
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 39, 0

Conread position: 14-272
Cow position: chr26:3753292-3753026 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 185

Conread position: 14-272
Cow position: chr26:27933357-27933087 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 0

Conread position: 280-391
Cow position: chr26:13021024-13020913 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 94
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 269-394
Cow position: chr27:4960307-4960430 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 97
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 25, 0

Conread position: 276-394
Cow position: chr27:19924675-19924556 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 95
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 105, 0

Conread position: 281-391
Cow position: chr27:1789301-1789411 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 90
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 297-394
Cow position: chr27:18767220-18767317 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 84
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 289-394
Cow position: chr28:12631666-12631771 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 91
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 222-379
Cow position: chr29:28049204-28049351 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 124
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 24, 0

Conread position: 14-268
Cow position: chr3:10585344-10585086 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 51

Conread position: 14-271
Cow position: chr3:26717530-26717265 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 82

Conread position: 278-394
Cow position: chr3:83504285-83504402 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 92
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 54, 0

Conread position: 281-394
Cow position: chr3:7428089-7428202 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 93
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 284-390
Cow position: chr3:507555-507659 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 89
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 52, 0

Conread position: 284-391
Cow position: chr3:62623098-62622990 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 88
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 67, 0

Conread position: 285-381
Cow position: chr3:74243087-74243183 (view UCSC Genome Browser custom track)
Alignm length: 97
Alignm identity: 82
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 285-394
Cow position: chr3:47726071-47725964 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 93
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 64, 0

Conread position: 288-394
Cow position: chr3:31048416-31048310 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 85
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 304-394
Cow position: chr3:58940241-58940330 (view UCSC Genome Browser custom track)
Alignm length: 91
Alignm identity: 78
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 43, 0

Conread position: 285-394
Cow position: chr4:58305797-58305692 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 93
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 51, 0

Conread position: 292-394
Cow position: chr4:33140368-33140470 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 87
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 299-395
Cow position: chr4:20843029-20843125 (view UCSC Genome Browser custom track)
Alignm length: 97
Alignm identity: 81
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 278-391
Cow position: chr5:34887045-34886936 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 93
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 88, 0

Conread position: 291-394
Cow position: chr5:63987302-63987199 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 88
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 299-390
Cow position: chr5:50964533-50964624 (view UCSC Genome Browser custom track)
Alignm length: 92
Alignm identity: 78
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 299-391
Cow position: chr5:63089829-63089737 (view UCSC Genome Browser custom track)
Alignm length: 93
Alignm identity: 80
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 295-395
Cow position: chr6:10636277-10636377 (view UCSC Genome Browser custom track)
Alignm length: 101
Alignm identity: 83
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 296-392
Cow position: chr6:34034584-34034680 (view UCSC Genome Browser custom track)
Alignm length: 97
Alignm identity: 80
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 308-394
Cow position: chr6:58227540-58227626 (view UCSC Genome Browser custom track)
Alignm length: 87
Alignm identity: 75
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 295-395
Cow position: chr7:62553545-62553645 (view UCSC Genome Browser custom track)
Alignm length: 101
Alignm identity: 83
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 271-394
Cow position: chr8:34478213-34478333 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 98
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 81, 23

Conread position: 288-395
Cow position: chr8:38645200-38645096 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 89
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 49, 0

Conread position: 292-388
Cow position: chr8:52229564-52229468 (view UCSC Genome Browser custom track)
Alignm length: 97
Alignm identity: 82
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 292-394
Cow position: chr8:30728664-30728560 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 87
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 47, 0

Conread position: 31-269
Cow position: chr9:13486303-13486068 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 171
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 23, 79

Conread position: 278-394
Cow position: chr9:9503002-9502890 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 96
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 88, 0

Conread position: 295-394
Cow position: chr9:25431988-25432085 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 85
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 42, 0

Conread position: 301-384
Cow position: chr9:34811384-34811301 (view UCSC Genome Browser custom track)
Alignm length: 84
Alignm identity: 74
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 284-394
Cow position: chrX:33151815-33151705 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 88
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 0, 0