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Cow genome map

           
Conread name:
           
Liv1-LVRM10139G05
        

               
Conread position:
               
174-361
               

               
Cow position:
               
chr1:6971421-6971237 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
99, 31
               

               
Conread position:
               
178-390
               

               
Cow position:
               
chr1:93430074-93429856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
23, 85
               

               
Conread position:
               
188-342
               

               
Cow position:
               
chr1:96313581-96313429 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
17, 71
               

               
Conread position:
               
189-390
               

               
Cow position:
               
chr1:101656922-101657122 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
83, 65
               

               
Conread position:
               
189-394
               

               
Cow position:
               
chr1:60452145-60452351 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
83, 67
               

               
Conread position:
               
190-366
               

               
Cow position:
               
chr1:90978512-90978336 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
20, 141
               

               
Conread position:
               
194-356
               

               
Cow position:
               
chr1:24684693-24684538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
194-387
               

               
Cow position:
               
chr1:17467272-17467468 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
66, 131
               

               
Conread position:
               
197-354
               

               
Cow position:
               
chr1:57220717-57220566 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
197-381
               

               
Cow position:
               
chr1:29005275-29005094 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
197-387
               

               
Cow position:
               
chr1:89938864-89939053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
8, 63
               

               
Conread position:
               
197-394
               

               
Cow position:
               
chr1:79931435-79931238 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
177, 19
               

               
Conread position:
               
197-394
               

               
Cow position:
               
chr1:93128873-93129072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
75, 59
               

               
Conread position:
               
198-331
               

               
Cow position:
               
chr1:31116820-31116952 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
74, 58
               

               
Conread position:
               
198-354
               

               
Cow position:
               
chr1:6309660-6309511 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
8, 0
               

               
Conread position:
               
198-354
               

               
Cow position:
               
chr1:67902501-67902351 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
198-359
               

               
Cow position:
               
chr1:91981171-91981014 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
7, 56
               

               
Conread position:
               
198-368
               

               
Cow position:
               
chr1:22605370-22605532 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
74, 60
               

               
Conread position:
               
198-368
               

               
Cow position:
               
chr1:102334939-102334773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
134, 49
               

               
Conread position:
               
198-371
               

               
Cow position:
               
chr1:102311073-102310895 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
74, 59
               

               
Conread position:
               
198-372
               

               
Cow position:
               
chr1:24230095-24229925 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
74, 42
               

               
Conread position:
               
198-387
               

               
Cow position:
               
chr1:28470107-28469919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
175, 45
               

               
Conread position:
               
198-388
               

               
Cow position:
               
chr1:93438717-93438914 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
73, 59
               

               
Conread position:
               
198-389
               

               
Cow position:
               
chr1:47636440-47636252 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
75, 42
               

               
Conread position:
               
198-390
               

               
Cow position:
               
chr1:11056018-11056212 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
7, 110
               

               
Conread position:
               
198-390
               

               
Cow position:
               
chr1:93571373-93571563 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
176, 16
               

               
Conread position:
               
201-332
               

               
Cow position:
               
chr1:97478241-97478111 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
71, 21
               

               
Conread position:
               
202-357
               

               
Cow position:
               
chr1:22590350-22590500 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
202-385
               

               
Cow position:
               
chr1:81468843-81469021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
70, 15
               

               
Conread position:
               
204-365
               

               
Cow position:
               
chr1:5762238-5762400 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
15, 54
               

               
Conread position:
               
204-380
               

               
Cow position:
               
chr1:63199495-63199321 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
102, 0
               

               
Conread position:
               
204-394
               

               
Cow position:
               
chr1:80187620-80187430 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
68, 53
               

               
Conread position:
               
204-394
               

               
Cow position:
               
chr1:82420189-82420378 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
117, 49
               

               
Conread position:
               
206-332
               

               
Cow position:
               
chr1:44128526-44128652 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
128
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
66, 51
               

               
Conread position:
               
206-352
               

               
Cow position:
               
chr1:102311831-102311683 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
66, 58
               

               
Conread position:
               
206-356
               

               
Cow position:
               
chr1:3103507-3103357 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
66, 51
               

               
Conread position:
               
206-366
               

               
Cow position:
               
chr1:60453804-60453647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
11, 28
               

               
Conread position:
               
207-381
               

               
Cow position:
               
chr1:80192810-80192987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
65, 48
               

               
Conread position:
               
207-389
               

               
Cow position:
               
chr1:93579651-93579829 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
64, 28
               

               
Conread position:
               
207-390
               

               
Cow position:
               
chr1:15263785-15263966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
148, 49
               

               
Conread position:
               
207-390
               

               
Cow position:
               
chr1:90072776-90072961 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
9, 100
               

               
Conread position:
               
207-394
               

               
Cow position:
               
chr1:46283257-46283453 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
75, 29
               

               
Conread position:
               
207-394
               

               
Cow position:
               
chr1:89399281-89399091 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
12, 50
               

               
Conread position:
               
207-407
               

               
Cow position:
               
chr1:31114001-31114205 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
113, 50
               

               
Conread position:
               
208-322
               

               
Cow position:
               
chr1:70257131-70257017 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
116
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
64, 47
               

               
Conread position:
               
208-354
               

               
Cow position:
               
chr1:92056616-92056467 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
9, 51
               

               
Conread position:
               
208-366
               

               
Cow position:
               
chr1:2530111-2529954 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
64, 49
               

               
Conread position:
               
208-381
               

               
Cow position:
               
chr1:16984449-16984277 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
64, 49
               

               
Conread position:
               
208-386
               

               
Cow position:
               
chr1:8692755-8692931 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
61, 48
               

               
Conread position:
               
209-344
               

               
Cow position:
               
chr1:14383521-14383388 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
63, 55
               

               
Conread position:
               
209-364
               

               
Cow position:
               
chr1:60785540-60785692 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
84, 0
               

               
Conread position:
               
209-388
               

               
Cow position:
               
chr1:40872281-40872461 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
63, 47
               

               
Conread position:
               
209-398
               

               
Cow position:
               
chr1:90862431-90862242 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
63, 48
               

               
Conread position:
               
210-394
               

               
Cow position:
               
chr1:4269637-4269451 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
62, 47
               

               
Conread position:
               
210-395
               

               
Cow position:
               
chr1:76660183-76660369 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
164, 96
               

               
Conread position:
               
225-397
               

               
Cow position:
               
chr1:89093920-89093749 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
47, 32
               

               
Conread position:
               
229-394
               

               
Cow position:
               
chr1:81225331-81225494 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
144, 20
               

               
Conread position:
               
230-394
               

               
Cow position:
               
chr1:44033898-44033735 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
42, 27
               

               
Conread position:
               
238-394
               

               
Cow position:
               
chr1:90971615-90971773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
34, 18
               

               
Conread position:
               
239-368
               

               
Cow position:
               
chr1:70310161-70310032 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
132
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
94, 25
               

               
Conread position:
               
167-389
               

               
Cow position:
               
chr10:41269827-41269602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
28, 92
               

               
Conread position:
               
192-386
               

               
Cow position:
               
chr10:49356430-49356241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
80, 11
               

               
Conread position:
               
193-403
               

               
Cow position:
               
chr10:69632493-69632700 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
187, 21
               

               
Conread position:
               
196-394
               

               
Cow position:
               
chr10:53821868-53822064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
166, 19
               

               
Conread position:
               
197-368
               

               
Cow position:
               
chr10:27254205-27254038 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
135, 18
               

               
Conread position:
               
197-386
               

               
Cow position:
               
chr10:16699244-16699056 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
75, 60
               

               
Conread position:
               
198-365
               

               
Cow position:
               
chr10:23765293-23765454 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
199-389
               

               
Cow position:
               
chr10:41274048-41273860 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
75, 58
               

               
Conread position:
               
206-368
               

               
Cow position:
               
chr10:56916754-56916586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
22, 55
               

               
Conread position:
               
206-394
               

               
Cow position:
               
chr10:23451479-23451667 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
66, 40
               

               
Conread position:
               
207-354
               

               
Cow position:
               
chr10:62613645-62613504 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
207-354
               

               
Cow position:
               
chr10:67566673-67566814 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
207-363
               

               
Cow position:
               
chr10:26288878-26289035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
65, 51
               

               
Conread position:
               
207-388
               

               
Cow position:
               
chr10:21395409-21395229 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
65, 50
               

               
Conread position:
               
207-389
               

               
Cow position:
               
chr10:3826229-3826046 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
65, 50
               

               
Conread position:
               
207-390
               

               
Cow position:
               
chr10:60963078-60963263 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
65, 40
               

               
Conread position:
               
207-394
               

               
Cow position:
               
chr10:50564692-50564506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
167, 99
               

               
Conread position:
               
207-394
               

               
Cow position:
               
chr10:67881210-67881395 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
67, 29
               

               
Conread position:
               
208-323
               

               
Cow position:
               
chr10:55116618-55116503 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
117
               

               
Alignm identity:
               
94
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
64, 56
               

               
Conread position:
               
208-389
               

               
Cow position:
               
chr10:41266089-41265915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
64, 33
               

               
Conread position:
               
218-389
               

               
Cow position:
               
chr10:41281702-41281534 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
218-394
               

               
Cow position:
               
chr10:9372712-9372534 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
116, 40
               

               
Conread position:
               
231-394
               

               
Cow position:
               
chr10:65206090-65205927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
41, 26
               

               
Conread position:
               
174-340
               

               
Cow position:
               
chr11:86667401-86667237 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
155, 15
               

               
Conread position:
               
178-355
               

               
Cow position:
               
chr11:83086888-83086712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
96, 13
               

               
Conread position:
               
183-322
               

               
Cow position:
               
chr11:45492788-45492651 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
36, 20
               

               
Conread position:
               
190-389
               

               
Cow position:
               
chr11:75202194-75202390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
81, 27
               

               
Conread position:
               
195-317
               

               
Cow position:
               
chr11:80192314-80192433 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
124
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
10, 59
               

               
Conread position:
               
195-366
               

               
Cow position:
               
chr11:49009569-49009736 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
74, 47
               

               
Conread position:
               
195-368
               

               
Cow position:
               
chr11:68236734-68236910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
21, 64
               

               
Conread position:
               
195-394
               

               
Cow position:
               
chr11:59989090-59989292 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
18, 53
               

               
Conread position:
               
196-394
               

               
Cow position:
               
chr11:2891675-2891873 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
9, 111
               

               
Conread position:
               
197-361
               

               
Cow position:
               
chr11:25355677-25355837 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
197-386
               

               
Cow position:
               
chr11:3612753-3612570 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
14, 60
               

               
Conread position:
               
197-394
               

               
Cow position:
               
chr11:75166892-75167093 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
75, 59
               

               
Conread position:
               
198-318
               

               
Cow position:
               
chr11:41029865-41029984 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
121
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
198-341
               

               
Cow position:
               
chr11:30222410-30222267 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
12, 60
               

               
Conread position:
               
198-361
               

               
Cow position:
               
chr11:2069151-2068989 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
74, 58
               

               
Conread position:
               
198-378
               

               
Cow position:
               
chr11:58355105-58354924 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
7, 109
               

               
Conread position:
               
198-385
               

               
Cow position:
               
chr11:68168649-68168830 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
8, 0
               

               
Conread position:
               
198-386
               

               
Cow position:
               
chr11:31348700-31348514 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
74, 57
               

               
Conread position:
               
198-389
               

               
Cow position:
               
chr11:2894658-2894850 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
32, 68
               

               
Conread position:
               
198-389
               

               
Cow position:
               
chr11:3744154-3743963 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
74, 156
               

               
Conread position:
               
200-368
               

               
Cow position:
               
chr11:30474315-30474146 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
18, 69
               

               
Conread position:
               
200-391
               

               
Cow position:
               
chr11:71161514-71161708 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
5, 121
               

               
Conread position:
               
204-390
               

               
Cow position:
               
chr11:14191206-14191391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
179, 54
               

               
Conread position:
               
206-354
               

               
Cow position:
               
chr11:63671670-63671528 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
206-366
               

               
Cow position:
               
chr11:31847768-31847924 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
11, 38
               

               
Conread position:
               
206-393
               

               
Cow position:
               
chr11:18179761-18179936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
207-335
               

               
Cow position:
               
chr11:45821293-45821167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
130
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
66, 28
               

               
Conread position:
               
207-361
               

               
Cow position:
               
chr11:19228540-19228389 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
207-368
               

               
Cow position:
               
chr11:12320446-12320604 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
207-381
               

               
Cow position:
               
chr11:80336054-80335886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
207-389
               

               
Cow position:
               
chr11:72344807-72344992 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
34, 58
               

               
Conread position:
               
207-392
               

               
Cow position:
               
chr11:61469758-61469572 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
167, 50
               

               
Conread position:
               
207-394
               

               
Cow position:
               
chr11:9715535-9715721 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
106, 47
               

               
Conread position:
               
207-394
               

               
Cow position:
               
chr11:31770857-31771039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
153, 50
               

               
Conread position:
               
207-394
               

               
Cow position:
               
chr11:59969897-59969706 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
93, 50
               

               
Conread position:
               
207-404
               

               
Cow position:
               
chr11:32206113-32205921 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
182, 50
               

               
Conread position:
               
208-373
               

               
Cow position:
               
chr11:81060566-81060402 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
64, 57
               

               
Conread position:
               
208-386
               

               
Cow position:
               
chr11:7066589-7066765 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
64, 48
               

               
Conread position:
               
208-397
               

               
Cow position:
               
chr11:40582189-40582378 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
109, 98
               

               
Conread position:
               
209-368
               

               
Cow position:
               
chr11:8456355-8456198 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
123, 20
               

               
Conread position:
               
209-393
               

               
Cow position:
               
chr11:85702023-85701835 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
112, 27
               

               
Conread position:
               
210-354
               

               
Cow position:
               
chr11:37724009-37724151 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
62, 30
               

               
Conread position:
               
218-386
               

               
Cow position:
               
chr11:31816297-31816132 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
115, 39
               

               
Conread position:
               
218-386
               

               
Cow position:
               
chr11:70684390-70684223 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
62, 46
               

               
Conread position:
               
220-389
               

               
Cow position:
               
chr11:40511811-40511978 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
112, 37
               

               
Conread position:
               
224-381
               

               
Cow position:
               
chr11:31887447-31887292 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
48, 33
               

               
Conread position:
               
230-368
               

               
Cow position:
               
chr11:31102815-31102950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
190-353
               

               
Cow position:
               
chr12:17690914-17691069 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
192-367
               

               
Cow position:
               
chr12:4137776-4137950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
7, 66
               

               
Conread position:
               
196-378
               

               
Cow position:
               
chr12:26550291-26550112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
9, 19
               

               
Conread position:
               
197-394
               

               
Cow position:
               
chr12:10683064-10682865 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
75, 60
               

               
Conread position:
               
205-381
               

               
Cow position:
               
chr12:8286090-8285916 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
67, 52
               

               
Conread position:
               
207-361
               

               
Cow position:
               
chr12:24334364-24334213 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
207-365
               

               
Cow position:
               
chr12:17335275-17335119 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
65, 50
               

               
Conread position:
               
207-394
               

               
Cow position:
               
chr12:37481705-37481896 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
65, 51
               

               
Conread position:
               
207-394
               

               
Cow position:
               
chr12:42787599-42787411 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
8, 13
               

               
Conread position:
               
207-397
               

               
Cow position:
               
chr12:45811828-45811632 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
113, 50
               

               
Conread position:
               
208-387
               

               
Cow position:
               
chr12:39123235-39123048 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
64, 49
               

               
Conread position:
               
209-386
               

               
Cow position:
               
chr12:27872077-27871906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
63, 44
               

               
Conread position:
               
211-381
               

               
Cow position:
               
chr12:10878431-10878596 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
215-367
               

               
Cow position:
               
chr12:13153247-13153399 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
9, 44
               

               
Conread position:
               
184-389
               

               
Cow position:
               
chr13:27711384-27711181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
13, 74
               

               
Conread position:
               
193-394
               

               
Cow position:
               
chr13:14863388-14863591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
11, 64
               

               
Conread position:
               
194-394
               

               
Cow position:
               
chr13:2780483-2780684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
76, 62
               

               
Conread position:
               
196-389
               

               
Cow position:
               
chr13:34189599-34189790 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
76, 67
               

               
Conread position:
               
197-365
               

               
Cow position:
               
chr13:60642964-60642800 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
20, 7
               

               
Conread position:
               
197-366
               

               
Cow position:
               
chr13:43639946-43639782 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
197-392
               

               
Cow position:
               
chr13:1902006-1902203 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
75, 59
               

               
Conread position:
               
198-328
               

               
Cow position:
               
chr13:29825880-29825750 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
132
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
74, 69
               

               
Conread position:
               
198-386
               

               
Cow position:
               
chr13:17121178-17121364 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
134, 59
               

               
Conread position:
               
198-394
               

               
Cow position:
               
chr13:15310791-15310588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
74, 59
               

               
Conread position:
               
198-394
               

               
Cow position:
               
chr13:41691199-41691002 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
37, 60
               

               
Conread position:
               
206-355
               

               
Cow position:
               
chr13:47305522-47305373 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
24, 101
               

               
Conread position:
               
206-356
               

               
Cow position:
               
chr13:27885450-27885303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
129, 46
               

               
Conread position:
               
206-368
               

               
Cow position:
               
chr13:26324561-26324721 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
159, 59
               

               
Conread position:
               
206-381
               

               
Cow position:
               
chr13:10111942-10111768 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
115, 51
               

               
Conread position:
               
206-386
               

               
Cow position:
               
chr13:20807463-20807282 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
66, 51
               

               
Conread position:
               
206-386
               

               
Cow position:
               
chr13:36820641-36820467 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
206-386
               

               
Cow position:
               
chr13:50813806-50813628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
66, 125
               

               
Conread position:
               
206-397
               

               
Cow position:
               
chr13:13800397-13800206 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
35, 51
               

               
Conread position:
               
207-301
               

               
Cow position:
               
chr13:14917423-14917517 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
96
               

               
Alignm identity:
               
85
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
86, 50
               

               
Conread position:
               
207-381
               

               
Cow position:
               
chr13:6063557-6063394 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
99, 0
               

               
Conread position:
               
207-386
               

               
Cow position:
               
chr13:26935356-26935167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
111, 50
               

               
Conread position:
               
207-390
               

               
Cow position:
               
chr13:33006739-33006557 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
166, 18
               

               
Conread position:
               
207-394
               

               
Cow position:
               
chr13:14025115-14024929 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
176, 54
               

               
Conread position:
               
207-418
               

               
Cow position:
               
chr13:40805450-40805238 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
65, 50
               

               
Conread position:
               
208-368
               

               
Cow position:
               
chr13:17580599-17580757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
14, 50
               

               
Conread position:
               
208-389
               

               
Cow position:
               
chr13:14574183-14574371 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
64, 45
               

               
Conread position:
               
208-389
               

               
Cow position:
               
chr13:42124636-42124456 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
122, 28
               

               
Conread position:
               
208-394
               

               
Cow position:
               
chr13:13559307-13559485 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
166, 49
               

               
Conread position:
               
209-394
               

               
Cow position:
               
chr13:54409537-54409346 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
121, 97
               

               
Conread position:
               
210-385
               

               
Cow position:
               
chr13:2188505-2188333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
62, 26
               

               
Conread position:
               
217-389
               

               
Cow position:
               
chr13:50786972-50787146 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
55, 39
               

               
Conread position:
               
217-394
               

               
Cow position:
               
chr13:19329694-19329508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
37, 110
               

               
Conread position:
               
218-389
               

               
Cow position:
               
chr13:42101539-42101711 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
156, 39
               

               
Conread position:
               
231-389
               

               
Cow position:
               
chr13:31483455-31483299 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
41, 33
               

               
Conread position:
               
175-368
               

               
Cow position:
               
chr14:16517286-16517477 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
22, 83
               

               
Conread position:
               
189-368
               

               
Cow position:
               
chr14:26040892-26040714 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
9, 69
               

               
Conread position:
               
196-353
               

               
Cow position:
               
chr14:18429040-18428884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
77, 61
               

               
Conread position:
               
196-361
               

               
Cow position:
               
chr14:33534186-33534350 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
76, 68
               

               
Conread position:
               
197-394
               

               
Cow position:
               
chr14:26260487-26260683 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
75, 36
               

               
Conread position:
               
197-397
               

               
Cow position:
               
chr14:26265127-26264928 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
85, 60
               

               
Conread position:
               
198-353
               

               
Cow position:
               
chr14:45594783-45594625 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
118, 58
               

               
Conread position:
               
198-354
               

               
Cow position:
               
chr14:12246975-12246818 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
16, 60
               

               
Conread position:
               
198-366
               

               
Cow position:
               
chr14:6144745-6144584 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
19, 41
               

               
Conread position:
               
198-368
               

               
Cow position:
               
chr14:23150096-23149927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
74, 59
               

               
Conread position:
               
198-381
               

               
Cow position:
               
chr14:45730986-45731164 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
74, 40
               

               
Conread position:
               
198-386
               

               
Cow position:
               
chr14:26194163-26194346 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
123, 85
               

               
Conread position:
               
206-366
               

               
Cow position:
               
chr14:23562219-23562062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
11, 38
               

               
Conread position:
               
206-368
               

               
Cow position:
               
chr14:13153096-13153257 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
74, 50
               

               
Conread position:
               
206-386
               

               
Cow position:
               
chr14:1068397-1068577 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
66, 50
               

               
Conread position:
               
207-333
               

               
Cow position:
               
chr14:3703444-3703317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
130
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
65, 50
               

               
Conread position:
               
207-359
               

               
Cow position:
               
chr14:7116132-7115982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
207-368
               

               
Cow position:
               
chr14:15756555-15756715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
65, 49
               

               
Conread position:
               
207-368
               

               
Cow position:
               
chr14:25473070-25473224 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
65, 35
               

               
Conread position:
               
207-378
               

               
Cow position:
               
chr14:20887268-20887432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
86, 0
               

               
Conread position:
               
207-386
               

               
Cow position:
               
chr14:1533656-1533828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
207-386
               

               
Cow position:
               
chr14:10081707-10081891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
74, 49
               

               
Conread position:
               
207-390
               

               
Cow position:
               
chr14:5570203-5570020 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
167, 51
               

               
Conread position:
               
207-393
               

               
Cow position:
               
chr14:37249538-37249727 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
37, 101
               

               
Conread position:
               
207-394
               

               
Cow position:
               
chr14:33456454-33456642 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
167, 99
               

               
Conread position:
               
208-389
               

               
Cow position:
               
chr14:45780301-45780118 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
62, 49
               

               
Conread position:
               
208-403
               

               
Cow position:
               
chr14:28754922-28755113 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
166, 45
               

               
Conread position:
               
209-394
               

               
Cow position:
               
chr14:46392688-46392501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
7, 55
               

               
Conread position:
               
214-394
               

               
Cow position:
               
chr14:47013452-47013634 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
117, 92
               

               
Conread position:
               
217-388
               

               
Cow position:
               
chr14:40013881-40014054 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
55, 39
               

               
Conread position:
               
233-388
               

               
Cow position:
               
chr14:45765957-45765801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
39, 24
               

               
Conread position:
               
234-364
               

               
Cow position:
               
chr14:8456827-8456698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
257-394
               

               
Cow position:
               
chr14:32728614-32728749 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
269-384
               

               
Cow position:
               
chr14:11075127-11075016 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
116
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
183-386
               

               
Cow position:
               
chr15:39803136-39802940 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
185-394
               

               
Cow position:
               
chr15:26624482-26624688 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
31, 68
               

               
Conread position:
               
186-378
               

               
Cow position:
               
chr15:40490613-40490426 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
188, 28
               

               
Conread position:
               
186-394
               

               
Cow position:
               
chr15:36381978-36382187 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
188, 28
               

               
Conread position:
               
193-368
               

               
Cow position:
               
chr15:1036685-1036863 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
71, 163
               

               
Conread position:
               
198-334
               

               
Cow position:
               
chr15:33891703-33891839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
74, 58
               

               
Conread position:
               
198-348
               

               
Cow position:
               
chr15:23281200-23281351 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
118, 59
               

               
Conread position:
               
198-361
               

               
Cow position:
               
chr15:433422-433260 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
7, 109
               

               
Conread position:
               
198-365
               

               
Cow position:
               
chr15:52163936-52163765 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
74, 59
               

               
Conread position:
               
198-366
               

               
Cow position:
               
chr15:33465821-33465989 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
7, 45
               

               
Conread position:
               
198-368
               

               
Cow position:
               
chr15:11676633-11676801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
74, 56
               

               
Conread position:
               
198-389
               

               
Cow position:
               
chr15:45797555-45797743 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
75, 55
               

               
Conread position:
               
198-394
               

               
Cow position:
               
chr15:41208443-41208245 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
74, 59
               

               
Conread position:
               
199-386
               

               
Cow position:
               
chr15:4332859-4332676 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
199-394
               

               
Cow position:
               
chr15:22337183-22336984 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
6, 110
               

               
Conread position:
               
204-372
               

               
Cow position:
               
chr15:36110245-36110408 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
124, 49
               

               
Conread position:
               
206-349
               

               
Cow position:
               
chr15:48107259-48107398 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
206-366
               

               
Cow position:
               
chr15:12387986-12388142 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
11, 38
               

               
Conread position:
               
206-386
               

               
Cow position:
               
chr15:44903309-44903486 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
66, 30
               

               
Conread position:
               
206-410
               

               
Cow position:
               
chr15:9182698-9182900 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
123, 51
               

               
Conread position:
               
207-354
               

               
Cow position:
               
chr15:13994936-13994795 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
207-361
               

               
Cow position:
               
chr15:8284969-8284816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
137, 99
               

               
Conread position:
               
207-394
               

               
Cow position:
               
chr15:14497453-14497638 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
65, 45
               

               
Conread position:
               
207-394
               

               
Cow position:
               
chr15:50104212-50104400 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
167, 99
               

               
Conread position:
               
208-351
               

               
Cow position:
               
chr15:30560060-30559918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
111, 0
               

               
Conread position:
               
208-364
               

               
Cow position:
               
chr15:5225376-5225221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
9, 99
               

               
Conread position:
               
208-388
               

               
Cow position:
               
chr15:44902742-44902559 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
65, 146
               

               
Conread position:
               
208-390
               

               
Cow position:
               
chr15:10748591-10748406 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
64, 30
               

               
Conread position:
               
208-418
               

               
Cow position:
               
chr15:1259130-1258911 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
86, 98
               

               
Conread position:
               
209-353
               

               
Cow position:
               
chr15:14494278-14494422 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
63, 45
               

               
Conread position:
               
209-394
               

               
Cow position:
               
chr15:25076217-25076037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
7, 47
               

               
Conread position:
               
209-401
               

               
Cow position:
               
chr15:44963185-44962988 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
11, 7
               

               
Conread position:
               
231-400
               

               
Cow position:
               
chr15:18639222-18639054 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
143, 26
               

               
Conread position:
               
180-358
               

               
Cow position:
               
chr16:9955272-9955093 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
19, 84
               

               
Conread position:
               
180-368
               

               
Cow position:
               
chr16:46708507-46708698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
138, 77
               

               
Conread position:
               
188-385
               

               
Cow position:
               
chr16:31531482-31531286 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
84, 9
               

               
Conread position:
               
195-333
               

               
Cow position:
               
chr16:2522596-2522456 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
77, 21
               

               
Conread position:
               
195-368
               

               
Cow position:
               
chr16:40128947-40128776 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
77, 62
               

               
Conread position:
               
196-319
               

               
Cow position:
               
chr16:20977913-20977790 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
125
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
76, 61
               

               
Conread position:
               
196-368
               

               
Cow position:
               
chr16:49208209-49208378 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
76, 11
               

               
Conread position:
               
196-399
               

               
Cow position:
               
chr16:15434175-15433961 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
36, 63
               

               
Conread position:
               
197-344
               

               
Cow position:
               
chr16:31128606-31128750 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
136, 56
               

               
Conread position:
               
197-365
               

               
Cow position:
               
chr16:13137971-13137808 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
20, 9
               

               
Conread position:
               
197-368
               

               
Cow position:
               
chr16:47871134-47871298 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
197-379
               

               
Cow position:
               
chr16:19491246-19491419 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
197-386
               

               
Cow position:
               
chr16:23948448-23948259 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
75, 58
               

               
Conread position:
               
198-331
               

               
Cow position:
               
chr16:45132636-45132769 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
7, 68
               

               
Conread position:
               
198-386
               

               
Cow position:
               
chr16:40506959-40507146 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
35, 60
               

               
Conread position:
               
198-386
               

               
Cow position:
               
chr16:54017343-54017156 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
77, 66
               

               
Conread position:
               
199-368
               

               
Cow position:
               
chr16:40517265-40517426 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
122, 23
               

               
Conread position:
               
202-368
               

               
Cow position:
               
chr16:40502716-40502879 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
70, 54
               

               
Conread position:
               
204-370
               

               
Cow position:
               
chr16:48889604-48889765 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
68, 60
               

               
Conread position:
               
206-316
               

               
Cow position:
               
chr16:39021778-39021669 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
111
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
206-354
               

               
Cow position:
               
chr16:40122376-40122231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
66, 58
               

               
Conread position:
               
206-381
               

               
Cow position:
               
chr16:4396884-4396711 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
64, 51
               

               
Conread position:
               
206-387
               

               
Cow position:
               
chr16:2250217-2250038 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
66, 51
               

               
Conread position:
               
206-389
               

               
Cow position:
               
chr16:28198300-28198481 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
13, 9
               

               
Conread position:
               
206-394
               

               
Cow position:
               
chr16:34614216-34614022 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
66, 51
               

               
Conread position:
               
207-346
               

               
Cow position:
               
chr16:23385516-23385649 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
207-364
               

               
Cow position:
               
chr16:54305054-54304904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
207-386
               

               
Cow position:
               
chr16:18054822-18054644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
73, 50
               

               
Conread position:
               
207-386
               

               
Cow position:
               
chr16:21558436-21558255 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
117, 97
               

               
Conread position:
               
207-394
               

               
Cow position:
               
chr16:54015053-54014868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
109, 51
               

               
Conread position:
               
207-406
               

               
Cow position:
               
chr16:30655604-30655403 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
62, 103
               

               
Conread position:
               
208-366
               

               
Cow position:
               
chr16:37225337-37225493 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
124, 48
               

               
Conread position:
               
208-386
               

               
Cow position:
               
chr16:47743347-47743167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
57, 49
               

               
Conread position:
               
208-388
               

               
Cow position:
               
chr16:33440175-33439994 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
162, 98
               

               
Conread position:
               
208-394
               

               
Cow position:
               
chr16:49979393-49979204 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
66, 110
               

               
Conread position:
               
208-394
               

               
Cow position:
               
chr16:53198106-53198292 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
64, 48
               

               
Conread position:
               
209-394
               

               
Cow position:
               
chr16:11172124-11171939 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
164, 43
               

               
Conread position:
               
210-359
               

               
Cow position:
               
chr16:31529426-31529280 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
197-354
               

               
Cow position:
               
chr17:3830127-3829971 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
75, 51
               

               
Conread position:
               
197-381
               

               
Cow position:
               
chr17:36039117-36038928 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
8, 66
               

               
Conread position:
               
197-390
               

               
Cow position:
               
chr17:21905029-21905225 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
26, 19
               

               
Conread position:
               
198-353
               

               
Cow position:
               
chr17:24594921-24594769 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
115, 59
               

               
Conread position:
               
198-356
               

               
Cow position:
               
chr17:22460919-22460768 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
198-394
               

               
Cow position:
               
chr17:8303942-8303752 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
128, 58
               

               
Conread position:
               
198-394
               

               
Cow position:
               
chr17:23783514-23783712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
109, 16
               

               
Conread position:
               
198-394
               

               
Cow position:
               
chr17:25545364-25545167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
83, 59
               

               
Conread position:
               
198-399
               

               
Cow position:
               
chr17:3836848-3836649 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
74, 59
               

               
Conread position:
               
203-368
               

               
Cow position:
               
chr17:7931546-7931383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
69, 64
               

               
Conread position:
               
206-381
               

               
Cow position:
               
chr17:34647783-34647609 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
66, 51
               

               
Conread position:
               
206-394
               

               
Cow position:
               
chr17:26652772-26652962 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
66, 50
               

               
Conread position:
               
206-394
               

               
Cow position:
               
chr17:33985090-33985276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
66, 51
               

               
Conread position:
               
207-354
               

               
Cow position:
               
chr17:24585891-24586035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
75, 49
               

               
Conread position:
               
207-389
               

               
Cow position:
               
chr17:26654877-26654695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
65, 50
               

               
Conread position:
               
207-394
               

               
Cow position:
               
chr17:17907491-17907303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
65, 39
               

               
Conread position:
               
207-394
               

               
Cow position:
               
chr17:27713298-27713482 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
65, 49
               

               
Conread position:
               
207-394
               

               
Cow position:
               
chr17:45883915-45883738 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
67, 33
               

               
Conread position:
               
208-394
               

               
Cow position:
               
chr17:27865635-27865448 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
64, 55
               

               
Conread position:
               
219-394
               

               
Cow position:
               
chr17:10640014-10639842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
53, 37
               

               
Conread position:
               
225-394
               

               
Cow position:
               
chr17:1101534-1101365 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
149, 37
               

               
Conread position:
               
235-394
               

               
Cow position:
               
chr17:42585808-42585647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
148, 71
               

               
Conread position:
               
190-323
               

               
Cow position:
               
chr18:22877383-22877250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
84, 67
               

               
Conread position:
               
194-386
               

               
Cow position:
               
chr18:30978685-30978876 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
78, 60
               

               
Conread position:
               
195-317
               

               
Cow position:
               
chr18:15807197-15807315 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
123
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
197-359
               

               
Cow position:
               
chr18:4472138-4471973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
8, 114
               

               
Conread position:
               
197-365
               

               
Cow position:
               
chr18:54128582-54128420 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
197-394
               

               
Cow position:
               
chr18:52249319-52249124 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
177, 61
               

               
Conread position:
               
198-322
               

               
Cow position:
               
chr18:56217043-56216918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
127
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
49, 60
               

               
Conread position:
               
198-342
               

               
Cow position:
               
chr18:49386100-49386240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
198-353
               

               
Cow position:
               
chr18:420989-421142 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
118, 48
               

               
Conread position:
               
198-355
               

               
Cow position:
               
chr18:21617542-21617693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
198-368
               

               
Cow position:
               
chr18:52707016-52707183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
19, 43
               

               
Conread position:
               
198-394
               

               
Cow position:
               
chr18:52708902-52708712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
74, 66
               

               
Conread position:
               
199-394
               

               
Cow position:
               
chr18:2697812-2697615 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
9, 59
               

               
Conread position:
               
206-386
               

               
Cow position:
               
chr18:24796531-24796352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
66, 51
               

               
Conread position:
               
206-394
               

               
Cow position:
               
chr18:8691359-8691552 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
66, 58
               

               
Conread position:
               
207-329
               

               
Cow position:
               
chr18:10486612-10486489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
125
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
65, 57
               

               
Conread position:
               
207-353
               

               
Cow position:
               
chr18:45655145-45654998 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
114, 29
               

               
Conread position:
               
207-361
               

               
Cow position:
               
chr18:39097997-39097845 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
87, 51
               

               
Conread position:
               
207-383
               

               
Cow position:
               
chr18:1707389-1707565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
10, 49
               

               
Conread position:
               
207-390
               

               
Cow position:
               
chr18:4481119-4480935 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
15, 23
               

               
Conread position:
               
207-398
               

               
Cow position:
               
chr18:47844645-47844838 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
65, 49
               

               
Conread position:
               
208-366
               

               
Cow position:
               
chr18:7117739-7117583 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
64, 49
               

               
Conread position:
               
208-368
               

               
Cow position:
               
chr18:16558975-16559135 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
61, 48
               

               
Conread position:
               
208-410
               

               
Cow position:
               
chr18:14705133-14704942 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
172, 88
               

               
Conread position:
               
209-394
               

               
Cow position:
               
chr18:8340619-8340803 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
63, 9
               

               
Conread position:
               
211-364
               

               
Cow position:
               
chr18:16072017-16071865 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
121, 95
               

               
Conread position:
               
219-372
               

               
Cow position:
               
chr18:55145733-55145884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
113, 45
               

               
Conread position:
               
225-389
               

               
Cow position:
               
chr18:43243884-43243718 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
56, 32
               

               
Conread position:
               
194-368
               

               
Cow position:
               
chr19:51360049-51359876 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
78, 67
               

               
Conread position:
               
196-322
               

               
Cow position:
               
chr19:22429338-22429212 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
129
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
34, 61
               

               
Conread position:
               
197-394
               

               
Cow position:
               
chr19:33161233-33161033 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
22, 61
               

               
Conread position:
               
198-332
               

               
Cow position:
               
chr19:6763290-6763155 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
74, 59
               

               
Conread position:
               
198-359
               

               
Cow position:
               
chr19:6542072-6541909 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
118, 52
               

               
Conread position:
               
198-366
               

               
Cow position:
               
chr19:11433077-11433240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
7, 45
               

               
Conread position:
               
198-366
               

               
Cow position:
               
chr19:14424622-14424786 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
21, 60
               

               
Conread position:
               
198-397
               

               
Cow position:
               
chr19:15971827-15972024 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
8.99999e-40
               

               
Alignm gaps (pig, cow):
               
74, 56
               

               
Conread position:
               
200-368
               

               
Cow position:
               
chr19:11973259-11973426 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
71, 100
               

               
Conread position:
               
206-367
               

               
Cow position:
               
chr19:11079431-11079271 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
66, 49
               

               
Conread position:
               
207-322
               

               
Cow position:
               
chr19:53012694-53012579 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
117
               

               
Alignm identity:
               
93
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
65, 50
               

               
Conread position:
               
207-381
               

               
Cow position:
               
chr19:36592630-36592803 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
65, 55
               

               
Conread position:
               
207-394
               

               
Cow position:
               
chr19:20609508-20609699 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
65, 49
               

               
Conread position:
               
207-394
               

               
Cow position:
               
chr19:33287051-33287237 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
122, 50
               

               
Conread position:
               
209-391
               

               
Cow position:
               
chr19:28448387-28448208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
62, 20
               

               
Conread position:
               
219-368
               

               
Cow position:
               
chr19:47574613-47574765 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
92, 38
               

               
Conread position:
               
222-394
               

               
Cow position:
               
chr19:54160052-54159881 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
50, 35
               

               
Conread position:
               
225-381
               

               
Cow position:
               
chr19:11418127-11417969 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
99, 39
               

               
Conread position:
               
227-389
               

               
Cow position:
               
chr19:24047048-24047209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
45, 27
               

               
Conread position:
               
232-394
               

               
Cow position:
               
chr19:53634582-53634419 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
100, 25
               

               
Conread position:
               
194-386
               

               
Cow position:
               
chr2:64174834-64175015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
78, 63
               

               
Conread position:
               
195-330
               

               
Cow position:
               
chr2:49861893-49862026 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
196-361
               

               
Cow position:
               
chr2:377642-377808 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
14, 110
               

               
Conread position:
               
197-355
               

               
Cow position:
               
chr2:18088621-18088778 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
133, 107
               

               
Conread position:
               
197-394
               

               
Cow position:
               
chr2:377076-376877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
8, 61
               

               
Conread position:
               
197-394
               

               
Cow position:
               
chr2:3713982-3713786 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
78, 67
               

               
Conread position:
               
198-354
               

               
Cow position:
               
chr2:12693450-12693301 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
8, 0
               

               
Conread position:
               
198-368
               

               
Cow position:
               
chr2:1683349-1683181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
75, 59
               

               
Conread position:
               
198-368
               

               
Cow position:
               
chr2:46490042-46490211 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
74, 58
               

               
Conread position:
               
198-372
               

               
Cow position:
               
chr2:38809577-38809405 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
21, 60
               

               
Conread position:
               
198-381
               

               
Cow position:
               
chr2:74481993-74482173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
72, 59
               

               
Conread position:
               
198-389
               

               
Cow position:
               
chr2:21755025-21755217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
7, 45
               

               
Conread position:
               
198-394
               

               
Cow position:
               
chr2:856411-856605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
15, 25
               

               
Conread position:
               
198-394
               

               
Cow position:
               
chr2:5327591-5327785 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
72, 42
               

               
Conread position:
               
198-394
               

               
Cow position:
               
chr2:27776643-27776840 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
74, 57
               

               
Conread position:
               
198-394
               

               
Cow position:
               
chr2:29450346-29450543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
73, 58
               

               
Conread position:
               
198-394
               

               
Cow position:
               
chr2:40449756-40449559 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
176, 67
               

               
Conread position:
               
198-394
               

               
Cow position:
               
chr2:55407025-55407219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
176, 8
               

               
Conread position:
               
198-394
               

               
Cow position:
               
chr2:64784574-64784379 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
176, 16
               

               
Conread position:
               
198-394
               

               
Cow position:
               
chr2:81129779-81129975 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
74, 38
               

               
Conread position:
               
199-394
               

               
Cow position:
               
chr2:18448204-18448402 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
72, 58
               

               
Conread position:
               
204-390
               

               
Cow position:
               
chr2:65334360-65334544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
158, 25
               

               
Conread position:
               
206-365
               

               
Cow position:
               
chr2:65961358-65961200 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
11, 37
               

               
Conread position:
               
206-385
               

               
Cow position:
               
chr2:42191110-42190930 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
64, 51
               

               
Conread position:
               
206-386
               

               
Cow position:
               
chr2:71462004-71461826 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
124, 51
               

               
Conread position:
               
206-393
               

               
Cow position:
               
chr2:10161370-10161188 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
168, 40
               

               
Conread position:
               
206-394
               

               
Cow position:
               
chr2:9509392-9509201 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
66, 40
               

               
Conread position:
               
206-394
               

               
Cow position:
               
chr2:45113506-45113694 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
37, 52
               

               
Conread position:
               
207-364
               

               
Cow position:
               
chr2:76616736-76616889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
99, 0
               

               
Conread position:
               
207-368
               

               
Cow position:
               
chr2:36951992-36951831 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
70, 50
               

               
Conread position:
               
207-387
               

               
Cow position:
               
chr2:45690023-45690195 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
86, 0
               

               
Conread position:
               
207-394
               

               
Cow position:
               
chr2:43664354-43664169 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
65, 57
               

               
Conread position:
               
207-394
               

               
Cow position:
               
chr2:71465900-71465712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
65, 50
               

               
Conread position:
               
207-397
               

               
Cow position:
               
chr2:74439555-74439366 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
12, 51
               

               
Conread position:
               
207-400
               

               
Cow position:
               
chr2:15339320-15339513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
63, 49
               

               
Conread position:
               
208-448
               

               
Cow position:
               
chr2:35983209-35983451 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
65, 49
               

               
Conread position:
               
209-418
               

               
Cow position:
               
chr2:46448494-46448285 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
63, 48
               

               
Conread position:
               
222-361
               

               
Cow position:
               
chr2:42264471-42264606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
84, 0
               

               
Conread position:
               
224-394
               

               
Cow position:
               
chr2:69641153-69640989 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
48, 33
               

               
Conread position:
               
226-359
               

               
Cow position:
               
chr2:33219403-33219273 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
231-381
               

               
Cow position:
               
chr2:47915941-47916089 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
41, 26
               

               
Conread position:
               
236-394
               

               
Cow position:
               
chr2:60311010-60310850 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
109, 27
               

               
Conread position:
               
182-332
               

               
Cow position:
               
chr20:39354112-39354262 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
48, 73
               

               
Conread position:
               
189-386
               

               
Cow position:
               
chr20:42107987-42107792 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
82, 35
               

               
Conread position:
               
192-334
               

               
Cow position:
               
chr20:4256452-4256592 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
129, 9
               

               
Conread position:
               
196-381
               

               
Cow position:
               
chr20:40200717-40200900 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
34, 62
               

               
Conread position:
               
197-359
               

               
Cow position:
               
chr20:11065933-11065777 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
197-386
               

               
Cow position:
               
chr20:39422640-39422453 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
8, 46
               

               
Conread position:
               
197-394
               

               
Cow position:
               
chr20:3057637-3057438 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
75, 60
               

               
Conread position:
               
197-394
               

               
Cow position:
               
chr20:18828970-18828771 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
16, 110
               

               
Conread position:
               
198-364
               

               
Cow position:
               
chr20:30154486-30154324 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
77, 38
               

               
Conread position:
               
198-368
               

               
Cow position:
               
chr20:13246554-13246386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
73, 59
               

               
Conread position:
               
198-386
               

               
Cow position:
               
chr20:5540507-5540693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
198-386
               

               
Cow position:
               
chr20:41171928-41172119 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
127, 59
               

               
Conread position:
               
199-366
               

               
Cow position:
               
chr20:39387031-39387194 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
18, 7
               

               
Conread position:
               
199-394
               

               
Cow position:
               
chr20:26056116-26055919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
44, 59
               

               
Conread position:
               
206-322
               

               
Cow position:
               
chr20:23913653-23913539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
117
               

               
Alignm identity:
               
93
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
206-368
               

               
Cow position:
               
chr20:37071629-37071464 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
66, 47
               

               
Conread position:
               
206-389
               

               
Cow position:
               
chr20:34963334-34963518 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
66, 50
               

               
Conread position:
               
206-394
               

               
Cow position:
               
chr20:16970917-16970722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
66, 51
               

               
Conread position:
               
207-381
               

               
Cow position:
               
chr20:19121615-19121442 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
109, 51
               

               
Conread position:
               
207-386
               

               
Cow position:
               
chr20:24000655-24000478 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
74, 29
               

               
Conread position:
               
208-397
               

               
Cow position:
               
chr20:23999351-23999167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
122, 45
               

               
Conread position:
               
209-318
               

               
Cow position:
               
chr20:1128666-1128557 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
111
               

               
Alignm identity:
               
91
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
63, 48
               

               
Conread position:
               
209-394
               

               
Cow position:
               
chr20:39973817-39973632 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
165, 48
               

               
Conread position:
               
212-389
               

               
Cow position:
               
chr20:34964454-34964630 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
60, 44
               

               
Conread position:
               
215-378
               

               
Cow position:
               
chr20:39730790-39730631 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
57, 23
               

               
Conread position:
               
218-368
               

               
Cow position:
               
chr20:35815398-35815548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
114, 88
               

               
Conread position:
               
218-394
               

               
Cow position:
               
chr20:18783844-18784018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
52, 38
               

               
Conread position:
               
179-390
               

               
Cow position:
               
chr21:32040112-32040325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
26, 20
               

               
Conread position:
               
194-366
               

               
Cow position:
               
chr21:22163077-22162913 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
5, 43
               

               
Conread position:
               
195-353
               

               
Cow position:
               
chr21:47231766-47231611 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
77, 62
               

               
Conread position:
               
195-381
               

               
Cow position:
               
chr21:35306180-35306366 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
40, 62
               

               
Conread position:
               
197-319
               

               
Cow position:
               
chr21:39255781-39255903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
124
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
74, 59
               

               
Conread position:
               
197-357
               

               
Cow position:
               
chr21:37260220-37260376 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
84, 17
               

               
Conread position:
               
197-357
               

               
Cow position:
               
chr21:41501878-41502034 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
197-366
               

               
Cow position:
               
chr21:13775781-13775619 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
20, 9
               

               
Conread position:
               
197-368
               

               
Cow position:
               
chr21:32450462-32450632 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
16, 46
               

               
Conread position:
               
197-368
               

               
Cow position:
               
chr21:39145586-39145417 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
75, 60
               

               
Conread position:
               
197-368
               

               
Cow position:
               
chr21:40698557-40698388 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
83, 60
               

               
Conread position:
               
197-368
               

               
Cow position:
               
chr21:49691258-49691089 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
75, 60
               

               
Conread position:
               
197-381
               

               
Cow position:
               
chr21:39667015-39666836 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
75, 18
               

               
Conread position:
               
198-359
               

               
Cow position:
               
chr21:41139844-41140003 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
108, 0
               

               
Conread position:
               
198-368
               

               
Cow position:
               
chr21:25335191-25335361 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
21, 38
               

               
Conread position:
               
198-386
               

               
Cow position:
               
chr21:35555886-35555701 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
146, 17
               

               
Conread position:
               
198-389
               

               
Cow position:
               
chr21:23278009-23277819 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
74, 66
               

               
Conread position:
               
198-394
               

               
Cow position:
               
chr21:958673-958483 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
175, 16
               

               
Conread position:
               
198-395
               

               
Cow position:
               
chr21:10418669-10418470 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
15, 60
               

               
Conread position:
               
203-386
               

               
Cow position:
               
chr21:5923826-5924008 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
69, 53
               

               
Conread position:
               
204-386
               

               
Cow position:
               
chr21:12410518-12410343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
124, 49
               

               
Conread position:
               
204-390
               

               
Cow position:
               
chr21:10275987-10275805 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
166, 49
               

               
Conread position:
               
206-368
               

               
Cow position:
               
chr21:17215606-17215443 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
115, 51
               

               
Conread position:
               
206-387
               

               
Cow position:
               
chr21:9015962-9015781 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
20, 52
               

               
Conread position:
               
206-388
               

               
Cow position:
               
chr21:16859288-16859471 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
126, 51
               

               
Conread position:
               
206-389
               

               
Cow position:
               
chr21:47459263-47459082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
66, 44
               

               
Conread position:
               
207-349
               

               
Cow position:
               
chr21:2682112-2681971 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
65, 50
               

               
Conread position:
               
207-364
               

               
Cow position:
               
chr21:42074519-42074673 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
99, 0
               

               
Conread position:
               
207-381
               

               
Cow position:
               
chr21:30925765-30925934 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
207-386
               

               
Cow position:
               
chr21:6605901-6606082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
65, 49
               

               
Conread position:
               
207-389
               

               
Cow position:
               
chr21:42862757-42862934 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
65, 33
               

               
Conread position:
               
208-366
               

               
Cow position:
               
chr21:37348452-37348613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
64, 48
               

               
Conread position:
               
208-372
               

               
Cow position:
               
chr21:49024498-49024661 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
64, 48
               

               
Conread position:
               
208-381
               

               
Cow position:
               
chr21:8515967-8515798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
208-386
               

               
Cow position:
               
chr21:7075531-7075352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
64, 10
               

               
Conread position:
               
208-386
               

               
Cow position:
               
chr21:45811457-45811634 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
11, 49
               

               
Conread position:
               
210-387
               

               
Cow position:
               
chr21:20785477-20785299 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
62, 15
               

               
Conread position:
               
213-397
               

               
Cow position:
               
chr21:13361316-13361137 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
59, 51
               

               
Conread position:
               
219-366
               

               
Cow position:
               
chr21:2832411-2832557 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
53, 45
               

               
Conread position:
               
222-394
               

               
Cow position:
               
chr21:18468611-18468786 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
85, 35
               

               
Conread position:
               
231-368
               

               
Cow position:
               
chr21:9200150-9200013 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
41, 26
               

               
Conread position:
               
179-362
               

               
Cow position:
               
chr22:25587850-25588032 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
20, 44
               

               
Conread position:
               
191-394
               

               
Cow position:
               
chr22:35459859-35460062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
183, 115
               

               
Conread position:
               
198-346
               

               
Cow position:
               
chr22:20314239-20314387 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
7, 108
               

               
Conread position:
               
198-354
               

               
Cow position:
               
chr22:735350-735200 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
198-368
               

               
Cow position:
               
chr22:2112540-2112372 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
14, 41
               

               
Conread position:
               
198-368
               

               
Cow position:
               
chr22:6930238-6930406 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
7, 20
               

               
Conread position:
               
198-381
               

               
Cow position:
               
chr22:15672626-15672446 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
17, 8
               

               
Conread position:
               
198-390
               

               
Cow position:
               
chr22:893995-894188 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
7, 61
               

               
Conread position:
               
198-394
               

               
Cow position:
               
chr22:14447200-14447397 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
123, 59
               

               
Conread position:
               
204-389
               

               
Cow position:
               
chr22:6238585-6238768 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
170, 89
               

               
Conread position:
               
206-368
               

               
Cow position:
               
chr22:6438635-6438797 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
66, 51
               

               
Conread position:
               
206-368
               

               
Cow position:
               
chr22:21164650-21164811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
66, 50
               

               
Conread position:
               
207-319
               

               
Cow position:
               
chr22:744235-744127 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
113
               

               
Alignm identity:
               
94
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
207-329
               

               
Cow position:
               
chr22:21021371-21021248 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
125
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
111, 50
               

               
Conread position:
               
207-382
               

               
Cow position:
               
chr22:14238181-14238355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
65, 49
               

               
Conread position:
               
207-386
               

               
Cow position:
               
chr22:42433206-42433034 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
65, 24
               

               
Conread position:
               
207-389
               

               
Cow position:
               
chr22:35892633-35892815 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
65, 49
               

               
Conread position:
               
207-399
               

               
Cow position:
               
chr22:6439162-6439351 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
63, 49
               

               
Conread position:
               
208-359
               

               
Cow position:
               
chr22:14244150-14244301 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
62, 48
               

               
Conread position:
               
210-381
               

               
Cow position:
               
chr22:35886624-35886796 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
62, 47
               

               
Conread position:
               
224-386
               

               
Cow position:
               
chr22:10658526-10658365 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
48, 33
               

               
Conread position:
               
230-381
               

               
Cow position:
               
chr22:37783389-37783235 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
42, 27
               

               
Conread position:
               
232-381
               

               
Cow position:
               
chr22:35758412-35758264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
40, 32
               

               
Conread position:
               
191-367
               

               
Cow position:
               
chr23:31756861-31756691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
195-368
               

               
Cow position:
               
chr23:27603-27775 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
77, 61
               

               
Conread position:
               
197-378
               

               
Cow position:
               
chr23:28882632-28882451 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
9, 111
               

               
Conread position:
               
197-386
               

               
Cow position:
               
chr23:20245849-20246034 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
75, 39
               

               
Conread position:
               
197-393
               

               
Cow position:
               
chr23:6303974-6303785 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
74, 17
               

               
Conread position:
               
197-397
               

               
Cow position:
               
chr23:596934-596735 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
84, 60
               

               
Conread position:
               
198-348
               

               
Cow position:
               
chr23:26343046-26343195 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
74, 58
               

               
Conread position:
               
198-356
               

               
Cow position:
               
chr23:18859059-18858907 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
198-381
               

               
Cow position:
               
chr23:22131957-22131767 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
74, 59
               

               
Conread position:
               
198-393
               

               
Cow position:
               
chr23:13307764-13307568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
119, 16
               

               
Conread position:
               
198-394
               

               
Cow position:
               
chr23:40504366-40504169 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
120, 60
               

               
Conread position:
               
198-399
               

               
Cow position:
               
chr23:27918738-27918539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
83, 59
               

               
Conread position:
               
198-412
               

               
Cow position:
               
chr23:30588171-30588386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
73, 56
               

               
Conread position:
               
206-319
               

               
Cow position:
               
chr23:4770888-4771001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
115
               

               
Alignm identity:
               
95
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
66, 50
               

               
Conread position:
               
206-368
               

               
Cow position:
               
chr23:7522169-7522008 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
13, 32
               

               
Conread position:
               
206-389
               

               
Cow position:
               
chr23:18394002-18394182 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
66, 50
               

               
Conread position:
               
207-305
               

               
Cow position:
               
chr23:9637586-9637484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
104
               

               
Alignm identity:
               
89
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
65, 49
               

               
Conread position:
               
207-378
               

               
Cow position:
               
chr23:665170-664999 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
65, 47
               

               
Conread position:
               
207-386
               

               
Cow position:
               
chr23:35164442-35164614 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
125, 8
               

               
Conread position:
               
207-394
               

               
Cow position:
               
chr23:1676529-1676350 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
106, 49
               

               
Conread position:
               
207-394
               

               
Cow position:
               
chr23:19841250-19841065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
65, 57
               

               
Conread position:
               
208-368
               

               
Cow position:
               
chr23:6048256-6048414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
64, 56
               

               
Conread position:
               
222-394
               

               
Cow position:
               
chr23:23877259-23877435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
49, 35
               

               
Conread position:
               
193-399
               

               
Cow position:
               
chr24:40328979-40328765 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
12, 63
               

               
Conread position:
               
194-386
               

               
Cow position:
               
chr24:38036736-38036922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
196-394
               

               
Cow position:
               
chr24:41202814-41203011 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
24, 50
               

               
Conread position:
               
197-389
               

               
Cow position:
               
chr24:18620648-18620836 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
197-394
               

               
Cow position:
               
chr24:31377197-31377000 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
8, 29
               

               
Conread position:
               
197-400
               

               
Cow position:
               
chr24:9211459-9211263 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
124, 60
               

               
Conread position:
               
198-366
               

               
Cow position:
               
chr24:35630316-35630152 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
19, 8
               

               
Conread position:
               
198-386
               

               
Cow position:
               
chr24:27552028-27551844 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
74, 34
               

               
Conread position:
               
198-386
               

               
Cow position:
               
chr24:41505214-41505029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
198-398
               

               
Cow position:
               
chr24:43913069-43913266 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
176, 27
               

               
Conread position:
               
199-381
               

               
Cow position:
               
chr24:26262532-26262352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
73, 57
               

               
Conread position:
               
200-368
               

               
Cow position:
               
chr24:39465286-39465125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
72, 35
               

               
Conread position:
               
203-368
               

               
Cow position:
               
chr24:19073083-19073248 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
69, 53
               

               
Conread position:
               
206-354
               

               
Cow position:
               
chr24:239266-239408 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
206-366
               

               
Cow position:
               
chr24:2920152-2920309 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
11, 38
               

               
Conread position:
               
206-367
               

               
Cow position:
               
chr24:139761-139921 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
66, 50
               

               
Conread position:
               
207-312
               

               
Cow position:
               
chr24:39460452-39460344 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
110
               

               
Alignm identity:
               
92
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
31, 53
               

               
Conread position:
               
207-394
               

               
Cow position:
               
chr24:19735255-19735077 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
65, 33
               

               
Conread position:
               
207-410
               

               
Cow position:
               
chr24:27253619-27253416 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
167, 50
               

               
Conread position:
               
207-417
               

               
Cow position:
               
chr24:11081676-11081473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
125, 50
               

               
Conread position:
               
207-417
               

               
Cow position:
               
chr24:12446598-12446801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
125, 50
               

               
Conread position:
               
209-386
               

               
Cow position:
               
chr24:263625-263802 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
63, 47
               

               
Conread position:
               
210-394
               

               
Cow position:
               
chr24:41205744-41205559 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
164, 48
               

               
Conread position:
               
217-361
               

               
Cow position:
               
chr24:27218714-27218573 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
55, 40
               

               
Conread position:
               
230-386
               

               
Cow position:
               
chr24:26891914-26892067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
230-394
               

               
Cow position:
               
chr24:41551470-41551304 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
42, 27
               

               
Conread position:
               
232-386
               

               
Cow position:
               
chr24:2961343-2961187 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
22, 98
               

               
Conread position:
               
195-331
               

               
Cow position:
               
chr25:7294208-7294345 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
61, 51
               

               
Conread position:
               
197-368
               

               
Cow position:
               
chr25:27883936-27883765 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
75, 58
               

               
Conread position:
               
197-386
               

               
Cow position:
               
chr25:13799944-13799758 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
75, 60
               

               
Conread position:
               
197-394
               

               
Cow position:
               
chr25:11412323-11412520 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
75, 59
               

               
Conread position:
               
197-394
               

               
Cow position:
               
chr25:21137715-21137917 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
75, 59
               

               
Conread position:
               
198-317
               

               
Cow position:
               
chr25:4498858-4498741 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
122
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
7, 57
               

               
Conread position:
               
198-354
               

               
Cow position:
               
chr25:29819834-29819989 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
136, 66
               

               
Conread position:
               
198-364
               

               
Cow position:
               
chr25:2002280-2002116 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
154, 16
               

               
Conread position:
               
198-386
               

               
Cow position:
               
chr25:21320669-21320861 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
16, 59
               

               
Conread position:
               
198-386
               

               
Cow position:
               
chr25:35449567-35449752 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
74, 44
               

               
Conread position:
               
198-389
               

               
Cow position:
               
chr25:20255659-20255465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
74, 59
               

               
Conread position:
               
198-394
               

               
Cow position:
               
chr25:2497152-2497349 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
74, 58
               

               
Conread position:
               
198-394
               

               
Cow position:
               
chr25:11263502-11263306 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
75, 59
               

               
Conread position:
               
198-394
               

               
Cow position:
               
chr25:11411103-11411301 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
74, 58
               

               
Conread position:
               
198-394
               

               
Cow position:
               
chr25:20646073-20645873 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
7, 98
               

               
Conread position:
               
198-394
               

               
Cow position:
               
chr25:32663495-32663692 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
66, 156
               

               
Conread position:
               
205-355
               

               
Cow position:
               
chr25:24750786-24750640 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
206-302
               

               
Cow position:
               
chr25:11351139-11351045 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
98
               

               
Alignm identity:
               
85
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
66, 50
               

               
Conread position:
               
206-368
               

               
Cow position:
               
chr25:7509762-7509922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
63, 50
               

               
Conread position:
               
206-381
               

               
Cow position:
               
chr25:13492331-13492505 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
66, 51
               

               
Conread position:
               
206-386
               

               
Cow position:
               
chr25:5848324-5848143 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
66, 51
               

               
Conread position:
               
206-386
               

               
Cow position:
               
chr25:17389843-17390021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
66, 51
               

               
Conread position:
               
206-394
               

               
Cow position:
               
chr25:25687293-25687102 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
41, 62
               

               
Conread position:
               
207-364
               

               
Cow position:
               
chr25:39716208-39716055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
86, 0
               

               
Conread position:
               
207-386
               

               
Cow position:
               
chr25:32711960-32711781 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
65, 126
               

               
Conread position:
               
207-393
               

               
Cow position:
               
chr25:16129043-16129230 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
65, 29
               

               
Conread position:
               
208-353
               

               
Cow position:
               
chr25:6962439-6962299 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
126, 45
               

               
Conread position:
               
208-394
               

               
Cow position:
               
chr25:34420696-34420513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
64, 99
               

               
Conread position:
               
217-367
               

               
Cow position:
               
chr25:21669078-21668927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
55, 40
               

               
Conread position:
               
218-367
               

               
Cow position:
               
chr25:1033977-1034124 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
219-370
               

               
Cow position:
               
chr25:15446165-15446311 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
52, 23
               

               
Conread position:
               
190-354
               

               
Cow position:
               
chr26:6530407-6530251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
192-394
               

               
Cow position:
               
chr26:25303478-25303275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
80, 7
               

               
Conread position:
               
194-394
               

               
Cow position:
               
chr26:22844791-22844592 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
168, 63
               

               
Conread position:
               
197-333
               

               
Cow position:
               
chr26:1542304-1542436 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
197-394
               

               
Cow position:
               
chr26:11758607-11758803 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
75, 59
               

               
Conread position:
               
198-334
               

               
Cow position:
               
chr26:26653799-26653663 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
76, 15
               

               
Conread position:
               
198-354
               

               
Cow position:
               
chr26:24954322-24954473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
143, 16
               

               
Conread position:
               
198-354
               

               
Cow position:
               
chr26:26673753-26673902 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
198-356
               

               
Cow position:
               
chr26:6663109-6663259 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
198-366
               

               
Cow position:
               
chr26:7316489-7316655 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
71, 58
               

               
Conread position:
               
198-366
               

               
Cow position:
               
chr26:13743743-13743582 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
199-386
               

               
Cow position:
               
chr26:18208202-18208018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
75, 30
               

               
Conread position:
               
204-394
               

               
Cow position:
               
chr26:5314379-5314192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
65, 59
               

               
Conread position:
               
206-356
               

               
Cow position:
               
chr26:11988939-11989084 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
207-359
               

               
Cow position:
               
chr26:5834996-5835145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
207-378
               

               
Cow position:
               
chr26:31844645-31844815 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
8, 50
               

               
Conread position:
               
207-386
               

               
Cow position:
               
chr26:31832801-31832972 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
110, 51
               

               
Conread position:
               
207-388
               

               
Cow position:
               
chr26:2920275-2920457 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
124, 112
               

               
Conread position:
               
208-361
               

               
Cow position:
               
chr26:22253940-22253788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
68, 49
               

               
Conread position:
               
209-368
               

               
Cow position:
               
chr26:6464700-6464857 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
61, 47
               

               
Conread position:
               
209-394
               

               
Cow position:
               
chr26:18372966-18373150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
165, 48
               

               
Conread position:
               
224-368
               

               
Cow position:
               
chr26:409324-409467 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
48, 30
               

               
Conread position:
               
189-353
               

               
Cow position:
               
chr27:13236219-13236056 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
34, 69
               

               
Conread position:
               
195-366
               

               
Cow position:
               
chr27:15907248-15907418 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
22, 11
               

               
Conread position:
               
197-381
               

               
Cow position:
               
chr27:31261902-31261719 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
75, 60
               

               
Conread position:
               
198-364
               

               
Cow position:
               
chr27:5635264-5635101 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
74, 38
               

               
Conread position:
               
198-368
               

               
Cow position:
               
chr27:4497295-4497126 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
21, 8
               

               
Conread position:
               
198-386
               

               
Cow position:
               
chr27:29700323-29700135 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
7, 49
               

               
Conread position:
               
199-390
               

               
Cow position:
               
chr27:15512057-15511865 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
6, 109
               

               
Conread position:
               
200-304
               

               
Cow position:
               
chr27:5096233-5096130 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
105
               

               
Alignm identity:
               
85
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
201-394
               

               
Cow position:
               
chr27:26072304-26072109 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
71, 56
               

               
Conread position:
               
205-353
               

               
Cow position:
               
chr27:7133288-7133142 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
133, 51
               

               
Conread position:
               
206-366
               

               
Cow position:
               
chr27:5486628-5486468 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
66, 51
               

               
Conread position:
               
207-340
               

               
Cow position:
               
chr27:8664711-8664579 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
99, 0
               

               
Conread position:
               
207-344
               

               
Cow position:
               
chr27:2392241-2392375 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
131, 46
               

               
Conread position:
               
207-361
               

               
Cow position:
               
chr27:20009990-20009839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
207-368
               

               
Cow position:
               
chr27:7618391-7618550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
65, 39
               

               
Conread position:
               
207-394
               

               
Cow position:
               
chr27:55990-56178 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
12, 50
               

               
Conread position:
               
207-394
               

               
Cow position:
               
chr27:16591384-16591196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
174, 99
               

               
Conread position:
               
210-368
               

               
Cow position:
               
chr27:7841702-7841545 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
62, 47
               

               
Conread position:
               
195-368
               

               
Cow position:
               
chr28:5345292-5345461 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
77, 11
               

               
Conread position:
               
196-372
               

               
Cow position:
               
chr28:8904600-8904427 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
79, 40
               

               
Conread position:
               
197-394
               

               
Cow position:
               
chr28:6951674-6951868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
22, 9
               

               
Conread position:
               
197-394
               

               
Cow position:
               
chr28:30126983-30126784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
76, 60
               

               
Conread position:
               
198-342
               

               
Cow position:
               
chr28:4133542-4133395 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
74, 58
               

               
Conread position:
               
198-365
               

               
Cow position:
               
chr28:91396-91557 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
198-368
               

               
Cow position:
               
chr28:29047523-29047691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
74, 58
               

               
Conread position:
               
198-388
               

               
Cow position:
               
chr28:22805957-22805771 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
176, 15
               

               
Conread position:
               
198-389
               

               
Cow position:
               
chr28:34705496-34705309 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
83, 57
               

               
Conread position:
               
199-342
               

               
Cow position:
               
chr28:25833688-25833831 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
73, 57
               

               
Conread position:
               
200-388
               

               
Cow position:
               
chr28:26251665-26251850 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
174, 58
               

               
Conread position:
               
206-368
               

               
Cow position:
               
chr28:11280449-11280291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
66, 51
               

               
Conread position:
               
206-394
               

               
Cow position:
               
chr28:25581506-25581317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
10, 53
               

               
Conread position:
               
207-368
               

               
Cow position:
               
chr28:29042064-29042223 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
65, 50
               

               
Conread position:
               
207-394
               

               
Cow position:
               
chr28:10569939-10570125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
167, 8
               

               
Conread position:
               
208-364
               

               
Cow position:
               
chr28:34846778-34846935 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
64, 46
               

               
Conread position:
               
209-361
               

               
Cow position:
               
chr28:19220123-19219972 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
63, 55
               

               
Conread position:
               
209-389
               

               
Cow position:
               
chr28:2052338-2052159 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
65, 48
               

               
Conread position:
               
210-405
               

               
Cow position:
               
chr28:22968845-22969029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
224-392
               

               
Cow position:
               
chr28:26920318-26920490 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
99, 33
               

               
Conread position:
               
186-344
               

               
Cow position:
               
chr29:30651833-30651676 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
6, 67
               

               
Conread position:
               
194-368
               

               
Cow position:
               
chr29:44023515-44023685 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
135, 46
               

               
Conread position:
               
197-334
               

               
Cow position:
               
chr29:8849308-8849445 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
29, 19
               

               
Conread position:
               
197-339
               

               
Cow position:
               
chr29:1773500-1773357 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
35, 61
               

               
Conread position:
               
197-381
               

               
Cow position:
               
chr29:16431922-16431740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
77, 60
               

               
Conread position:
               
197-386
               

               
Cow position:
               
chr29:30539318-30539512 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
75, 59
               

               
Conread position:
               
198-332
               

               
Cow position:
               
chr29:2541472-2541336 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
74, 59
               

               
Conread position:
               
198-332
               

               
Cow position:
               
chr29:19110145-19110011 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
74, 59
               

               
Conread position:
               
198-368
               

               
Cow position:
               
chr29:7353691-7353518 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
74, 59
               

               
Conread position:
               
198-386
               

               
Cow position:
               
chr29:11361151-11360968 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
21, 8
               

               
Conread position:
               
198-394
               

               
Cow position:
               
chr29:15521152-15521353 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
119, 16
               

               
Conread position:
               
200-394
               

               
Cow position:
               
chr29:24139975-24140173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
14, 58
               

               
Conread position:
               
206-331
               

               
Cow position:
               
chr29:17212040-17212161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
126
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
206-368
               

               
Cow position:
               
chr29:29128476-29128636 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
66, 50
               

               
Conread position:
               
206-368
               

               
Cow position:
               
chr29:32744355-32744515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
64, 23
               

               
Conread position:
               
206-386
               

               
Cow position:
               
chr29:29456052-29455875 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
66, 51
               

               
Conread position:
               
207-354
               

               
Cow position:
               
chr29:20049490-20049639 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
36, 50
               

               
Conread position:
               
207-354
               

               
Cow position:
               
chr29:29564302-29564157 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
207-387
               

               
Cow position:
               
chr29:1447336-1447158 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
167, 11
               

               
Conread position:
               
207-389
               

               
Cow position:
               
chr29:42909990-42909805 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
116, 50
               

               
Conread position:
               
208-394
               

               
Cow position:
               
chr29:30355552-30355741 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
64, 48
               

               
Conread position:
               
208-394
               

               
Cow position:
               
chr29:39295890-39296077 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
166, 98
               

               
Conread position:
               
208-394
               

               
Cow position:
               
chr29:40443043-40442857 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
64, 48
               

               
Conread position:
               
208-397
               

               
Cow position:
               
chr29:13500889-13500702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
81, 99
               

               
Conread position:
               
209-368
               

               
Cow position:
               
chr29:40633018-40632863 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
63, 48
               

               
Conread position:
               
209-394
               

               
Cow position:
               
chr29:10625719-10625904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
174, 49
               

               
Conread position:
               
209-394
               

               
Cow position:
               
chr29:36004947-36004761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
10, 49
               

               
Conread position:
               
209-394
               

               
Cow position:
               
chr29:39532174-39532360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
90, 49
               

               
Conread position:
               
214-394
               

               
Cow position:
               
chr29:1900835-1900653 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
58, 43
               

               
Conread position:
               
219-365
               

               
Cow position:
               
chr29:5778174-5778030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
102, 38
               

               
Conread position:
               
222-385
               

               
Cow position:
               
chr29:21307202-21307042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
60, 41
               

               
Conread position:
               
227-386
               

               
Cow position:
               
chr29:6744131-6743975 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
5, 31
               

               
Conread position:
               
164-364
               

               
Cow position:
               
chr3:31110099-31110298 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
41, 52
               

               
Conread position:
               
193-380
               

               
Cow position:
               
chr3:23178359-23178542 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
194-381
               

               
Cow position:
               
chr3:14184612-14184427 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
25, 21
               

               
Conread position:
               
195-368
               

               
Cow position:
               
chr3:20061911-20062084 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
77, 61
               

               
Conread position:
               
196-394
               

               
Cow position:
               
chr3:32246668-32246470 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
76, 61
               

               
Conread position:
               
197-381
               

               
Cow position:
               
chr3:39403834-39403650 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
24, 61
               

               
Conread position:
               
197-386
               

               
Cow position:
               
chr3:6591365-6591553 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
75, 59
               

               
Conread position:
               
197-389
               

               
Cow position:
               
chr3:9233565-9233375 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
75, 58
               

               
Conread position:
               
197-394
               

               
Cow position:
               
chr3:65534777-65534972 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
75, 60
               

               
Conread position:
               
198-359
               

               
Cow position:
               
chr3:53910492-53910648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
198-381
               

               
Cow position:
               
chr3:6770277-6770093 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
74, 6
               

               
Conread position:
               
198-386
               

               
Cow position:
               
chr3:4333278-4333084 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
12, 61
               

               
Conread position:
               
198-390
               

               
Cow position:
               
chr3:14039068-14038880 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
16, 60
               

               
Conread position:
               
198-394
               

               
Cow position:
               
chr3:72884629-72884826 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
73, 32
               

               
Conread position:
               
198-394
               

               
Cow position:
               
chr3:79067041-79067236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
15, 55
               

               
Conread position:
               
198-404
               

               
Cow position:
               
chr3:42935830-42936034 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
17, 8
               

               
Conread position:
               
200-389
               

               
Cow position:
               
chr3:22812856-22812667 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
128, 57
               

               
Conread position:
               
204-394
               

               
Cow position:
               
chr3:83981121-83980932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
173, 54
               

               
Conread position:
               
206-353
               

               
Cow position:
               
chr3:3253554-3253697 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
206-368
               

               
Cow position:
               
chr3:27524061-27524222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
64, 51
               

               
Conread position:
               
206-380
               

               
Cow position:
               
chr3:52609198-52609025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
66, 51
               

               
Conread position:
               
207-359
               

               
Cow position:
               
chr3:6559442-6559288 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
110, 99
               

               
Conread position:
               
207-364
               

               
Cow position:
               
chr3:20351626-20351777 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
65, 29
               

               
Conread position:
               
207-365
               

               
Cow position:
               
chr3:3804040-3803888 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
207-379
               

               
Cow position:
               
chr3:67538060-67537889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
12, 51
               

               
Conread position:
               
207-381
               

               
Cow position:
               
chr3:32579068-32578896 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
122, 99
               

               
Conread position:
               
207-394
               

               
Cow position:
               
chr3:63998002-63998199 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
65, 49
               

               
Conread position:
               
207-398
               

               
Cow position:
               
chr3:16574399-16574590 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
167, 98
               

               
Conread position:
               
208-363
               

               
Cow position:
               
chr3:665049-665202 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
136, 50
               

               
Conread position:
               
208-386
               

               
Cow position:
               
chr3:45948630-45948805 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
209-394
               

               
Cow position:
               
chr3:2307974-2308160 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
63, 47
               

               
Conread position:
               
209-394
               

               
Cow position:
               
chr3:8708862-8708678 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
165, 97
               

               
Conread position:
               
210-394
               

               
Cow position:
               
chr3:23630695-23630510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
62, 47
               

               
Conread position:
               
217-386
               

               
Cow position:
               
chr3:83432793-83432629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
96, 24
               

               
Conread position:
               
222-394
               

               
Cow position:
               
chr3:81222134-81222308 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
47, 35
               

               
Conread position:
               
223-390
               

               
Cow position:
               
chr3:53211014-53211182 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
151, 83
               

               
Conread position:
               
225-368
               

               
Cow position:
               
chr3:60787864-60788004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
192-366
               

               
Cow position:
               
chr4:53786440-53786610 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
25, 14
               

               
Conread position:
               
195-393
               

               
Cow position:
               
chr4:165413-165612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
10, 22
               

               
Conread position:
               
197-394
               

               
Cow position:
               
chr4:25189147-25188950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
75, 43
               

               
Conread position:
               
198-340
               

               
Cow position:
               
chr4:49410193-49410339 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
74, 58
               

               
Conread position:
               
198-367
               

               
Cow position:
               
chr4:63904884-63905052 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
74, 58
               

               
Conread position:
               
198-368
               

               
Cow position:
               
chr4:29743731-29743566 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
74, 7
               

               
Conread position:
               
198-378
               

               
Cow position:
               
chr4:23613292-23613118 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
176, 17
               

               
Conread position:
               
198-381
               

               
Cow position:
               
chr4:52337077-52336900 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
74, 43
               

               
Conread position:
               
198-386
               

               
Cow position:
               
chr4:44425779-44425590 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
74, 59
               

               
Conread position:
               
198-386
               

               
Cow position:
               
chr4:60833767-60833585 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
74, 59
               

               
Conread position:
               
198-390
               

               
Cow position:
               
chr4:42364586-42364778 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
20, 60
               

               
Conread position:
               
198-394
               

               
Cow position:
               
chr4:33002825-33002626 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
21, 67
               

               
Conread position:
               
198-394
               

               
Cow position:
               
chr4:35070633-35070434 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
19, 61
               

               
Conread position:
               
204-394
               

               
Cow position:
               
chr4:32803936-32803749 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
69, 60
               

               
Conread position:
               
206-322
               

               
Cow position:
               
chr4:34269026-34269144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
120
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
32, 52
               

               
Conread position:
               
206-386
               

               
Cow position:
               
chr4:6888017-6887840 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
206-389
               

               
Cow position:
               
chr4:43563439-43563623 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
66, 50
               

               
Conread position:
               
206-389
               

               
Cow position:
               
chr4:43566551-43566735 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
66, 50
               

               
Conread position:
               
207-359
               

               
Cow position:
               
chr4:59577306-59577455 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
207-386
               

               
Cow position:
               
chr4:66854047-66853871 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
99, 0
               

               
Conread position:
               
207-388
               

               
Cow position:
               
chr4:53652074-53651891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
65, 50
               

               
Conread position:
               
207-389
               

               
Cow position:
               
chr4:18283413-18283597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
63, 49
               

               
Conread position:
               
207-394
               

               
Cow position:
               
chr4:26617790-26617602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
167, 92
               

               
Conread position:
               
208-359
               

               
Cow position:
               
chr4:54377355-54377503 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
208-364
               

               
Cow position:
               
chr4:58028536-58028689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
64, 48
               

               
Conread position:
               
208-406
               

               
Cow position:
               
chr4:573814-574013 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
64, 48
               

               
Conread position:
               
218-357
               

               
Cow position:
               
chr4:20475455-20475592 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
59, 24
               

               
Conread position:
               
218-368
               

               
Cow position:
               
chr4:65654120-65653971 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
54, 39
               

               
Conread position:
               
219-378
               

               
Cow position:
               
chr4:57644218-57644063 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
53, 38
               

               
Conread position:
               
225-389
               

               
Cow position:
               
chr4:32360996-32361158 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
47, 31
               

               
Conread position:
               
230-388
               

               
Cow position:
               
chr4:39337978-39338139 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
42, 26
               

               
Conread position:
               
233-394
               

               
Cow position:
               
chr4:29119678-29119520 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
7, 25
               

               
Conread position:
               
178-394
               

               
Cow position:
               
chr5:2488959-2489180 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
94, 78
               

               
Conread position:
               
187-332
               

               
Cow position:
               
chr5:73566639-73566784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
85, 69
               

               
Conread position:
               
197-314
               

               
Cow position:
               
chr5:49645007-49644889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
120
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
15, 61
               

               
Conread position:
               
197-368
               

               
Cow position:
               
chr5:29576609-29576439 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
75, 60
               

               
Conread position:
               
197-379
               

               
Cow position:
               
chr5:9328537-9328719 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
119, 109
               

               
Conread position:
               
198-354
               

               
Cow position:
               
chr5:25479550-25479388 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
42, 72
               

               
Conread position:
               
198-357
               

               
Cow position:
               
chr5:43658999-43658844 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
7, 0
               

               
Conread position:
               
198-388
               

               
Cow position:
               
chr5:59118134-59117941 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
7, 60
               

               
Conread position:
               
198-389
               

               
Cow position:
               
chr5:31249631-31249442 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
74, 59
               

               
Conread position:
               
198-394
               

               
Cow position:
               
chr5:2188901-2188707 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
176, 55
               

               
Conread position:
               
198-394
               

               
Cow position:
               
chr5:7507142-7507336 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
114, 58
               

               
Conread position:
               
198-394
               

               
Cow position:
               
chr5:39338897-39338697 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
15, 60
               

               
Conread position:
               
199-389
               

               
Cow position:
               
chr5:3396396-3396587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
5, 16
               

               
Conread position:
               
204-394
               

               
Cow position:
               
chr5:9886571-9886764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
68, 11
               

               
Conread position:
               
206-362
               

               
Cow position:
               
chr5:16038133-16037982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
206-368
               

               
Cow position:
               
chr5:26464577-26464739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
66, 47
               

               
Conread position:
               
206-368
               

               
Cow position:
               
chr5:43088035-43087879 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
70, 24
               

               
Conread position:
               
206-381
               

               
Cow position:
               
chr5:17391420-17391593 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
206-381
               

               
Cow position:
               
chr5:44696872-44697046 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
66, 51
               

               
Conread position:
               
206-386
               

               
Cow position:
               
chr5:40388340-40388523 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
63, 50
               

               
Conread position:
               
206-419
               

               
Cow position:
               
chr5:13726440-13726651 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
9, 48
               

               
Conread position:
               
207-354
               

               
Cow position:
               
chr5:9368476-9368617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
207-368
               

               
Cow position:
               
chr5:47767638-47767794 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
114, 46
               

               
Conread position:
               
207-390
               

               
Cow position:
               
chr5:63793488-63793669 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
65, 46
               

               
Conread position:
               
208-363
               

               
Cow position:
               
chr5:61774001-61773846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
147, 49
               

               
Conread position:
               
208-401
               

               
Cow position:
               
chr5:41330340-41330532 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
108, 98
               

               
Conread position:
               
209-359
               

               
Cow position:
               
chr5:42709597-42709744 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
211-394
               

               
Cow position:
               
chr5:47837812-47837997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
61, 45
               

               
Conread position:
               
222-381
               

               
Cow position:
               
chr5:42140311-42140468 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
50, 18
               

               
Conread position:
               
225-394
               

               
Cow position:
               
chr5:47460213-47460043 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
47, 30
               

               
Conread position:
               
228-389
               

               
Cow position:
               
chr5:39323591-39323433 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
90, 29
               

               
Conread position:
               
230-386
               

               
Cow position:
               
chr5:25444625-25444780 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
91, 102
               

               
Conread position:
               
233-394
               

               
Cow position:
               
chr5:47367622-47367460 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
39, 24
               

               
Conread position:
               
179-386
               

               
Cow position:
               
chr6:35751147-35751350 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
8, 117
               

               
Conread position:
               
197-368
               

               
Cow position:
               
chr6:65706158-65706328 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
75, 60
               

               
Conread position:
               
197-386
               

               
Cow position:
               
chr6:51395881-51396068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
75, 56
               

               
Conread position:
               
197-394
               

               
Cow position:
               
chr6:50855840-50856043 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
127, 18
               

               
Conread position:
               
198-357
               

               
Cow position:
               
chr6:16611523-16611676 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
8, 0
               

               
Conread position:
               
198-365
               

               
Cow position:
               
chr6:18413974-18414139 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
132, 66
               

               
Conread position:
               
198-381
               

               
Cow position:
               
chr6:17291408-17291591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
74, 58
               

               
Conread position:
               
198-389
               

               
Cow position:
               
chr6:34101101-34101291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
74, 56
               

               
Conread position:
               
198-390
               

               
Cow position:
               
chr6:26637662-26637857 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
19, 65
               

               
Conread position:
               
198-405
               

               
Cow position:
               
chr6:45339515-45339720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
135, 55
               

               
Conread position:
               
203-365
               

               
Cow position:
               
chr6:20284914-20284751 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
69, 54
               

               
Conread position:
               
206-353
               

               
Cow position:
               
chr6:44610379-44610230 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
81, 51
               

               
Conread position:
               
206-366
               

               
Cow position:
               
chr6:62583344-62583185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
130, 51
               

               
Conread position:
               
206-368
               

               
Cow position:
               
chr6:22817556-22817717 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
66, 30
               

               
Conread position:
               
206-378
               

               
Cow position:
               
chr6:29838930-29838757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
79, 101
               

               
Conread position:
               
206-390
               

               
Cow position:
               
chr6:26554493-26554305 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
31, 58
               

               
Conread position:
               
206-394
               

               
Cow position:
               
chr6:15264512-15264692 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
206-394
               

               
Cow position:
               
chr6:55503483-55503292 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
69, 51
               

               
Conread position:
               
207-361
               

               
Cow position:
               
chr6:28440951-28440801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
114, 29
               

               
Conread position:
               
207-368
               

               
Cow position:
               
chr6:33323495-33323655 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
65, 49
               

               
Conread position:
               
207-368
               

               
Cow position:
               
chr6:48211667-48211823 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
65, 49
               

               
Conread position:
               
207-378
               

               
Cow position:
               
chr6:59219003-59218826 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
87, 105
               

               
Conread position:
               
207-386
               

               
Cow position:
               
chr6:61409815-61409988 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
65, 57
               

               
Conread position:
               
207-387
               

               
Cow position:
               
chr6:44757682-44757865 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
65, 49
               

               
Conread position:
               
209-386
               

               
Cow position:
               
chr6:16551936-16552113 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
10, 48
               

               
Conread position:
               
219-386
               

               
Cow position:
               
chr6:61130964-61130799 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
86, 0
               

               
Conread position:
               
224-394
               

               
Cow position:
               
chr6:417638-417807 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
150, 48
               

               
Conread position:
               
230-398
               

               
Cow position:
               
chr6:44231870-44232039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
152, 89
               

               
Conread position:
               
190-368
               

               
Cow position:
               
chr7:13418510-13418689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
15, 9
               

               
Conread position:
               
191-313
               

               
Cow position:
               
chr7:16291994-16292119 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
127
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
31, 70
               

               
Conread position:
               
197-366
               

               
Cow position:
               
chr7:22019009-22019176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
20, 45
               

               
Conread position:
               
197-394
               

               
Cow position:
               
chr7:24035391-24035190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
15, 110
               

               
Conread position:
               
197-398
               

               
Cow position:
               
chr7:40961052-40960847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
12, 115
               

               
Conread position:
               
198-341
               

               
Cow position:
               
chr7:32816208-32816066 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
74, 59
               

               
Conread position:
               
198-364
               

               
Cow position:
               
chr7:69123427-69123261 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
18, 110
               

               
Conread position:
               
198-365
               

               
Cow position:
               
chr7:6166453-6166293 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
77, 59
               

               
Conread position:
               
198-381
               

               
Cow position:
               
chr7:62818615-62818797 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
74, 59
               

               
Conread position:
               
198-386
               

               
Cow position:
               
chr7:29485098-29484918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
74, 31
               

               
Conread position:
               
198-386
               

               
Cow position:
               
chr7:32923626-32923813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
74, 59
               

               
Conread position:
               
198-386
               

               
Cow position:
               
chr7:60969653-60969466 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
123, 59
               

               
Conread position:
               
198-389
               

               
Cow position:
               
chr7:14367232-14367040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
74, 59
               

               
Conread position:
               
198-394
               

               
Cow position:
               
chr7:33444314-33444117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
74, 59
               

               
Conread position:
               
200-385
               

               
Cow position:
               
chr7:5877017-5876836 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
72, 57
               

               
Conread position:
               
206-356
               

               
Cow position:
               
chr7:36905516-36905659 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
206-366
               

               
Cow position:
               
chr7:57850554-57850711 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
66, 50
               

               
Conread position:
               
206-381
               

               
Cow position:
               
chr7:12482688-12482514 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
66, 51
               

               
Conread position:
               
206-389
               

               
Cow position:
               
chr7:37680778-37680961 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
115, 51
               

               
Conread position:
               
206-394
               

               
Cow position:
               
chr7:18296316-18296127 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
66, 51
               

               
Conread position:
               
207-356
               

               
Cow position:
               
chr7:19922457-19922600 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
130, 46
               

               
Conread position:
               
207-362
               

               
Cow position:
               
chr7:53236695-53236848 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
65, 49
               

               
Conread position:
               
207-381
               

               
Cow position:
               
chr7:59514691-59514866 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
98, 41
               

               
Conread position:
               
207-394
               

               
Cow position:
               
chr7:37622910-37622722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
65, 50
               

               
Conread position:
               
208-386
               

               
Cow position:
               
chr7:23653415-23653242 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
124, 23
               

               
Conread position:
               
208-387
               

               
Cow position:
               
chr7:54567064-54566884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
64, 49
               

               
Conread position:
               
208-394
               

               
Cow position:
               
chr7:26943437-26943251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
64, 22
               

               
Conread position:
               
208-394
               

               
Cow position:
               
chr7:50740774-50740961 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
166, 98
               

               
Conread position:
               
209-387
               

               
Cow position:
               
chr7:9434256-9434429 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
210-394
               

               
Cow position:
               
chr7:26941814-26941635 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
62, 54
               

               
Conread position:
               
164-365
               

               
Cow position:
               
chr8:16670009-16669813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
53, 42
               

               
Conread position:
               
182-394
               

               
Cow position:
               
chr8:24688009-24688224 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
17, 36
               

               
Conread position:
               
186-386
               

               
Cow position:
               
chr8:48674414-48674218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
192-381
               

               
Cow position:
               
chr8:12084710-12084522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
5, 110
               

               
Conread position:
               
194-368
               

               
Cow position:
               
chr8:1647684-1647856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
76, 62
               

               
Conread position:
               
197-332
               

               
Cow position:
               
chr8:52542757-52542892 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
8, 51
               

               
Conread position:
               
197-378
               

               
Cow position:
               
chr8:35559050-35558870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
138, 60
               

               
Conread position:
               
197-394
               

               
Cow position:
               
chr8:52924944-52925143 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
75, 59
               

               
Conread position:
               
198-334
               

               
Cow position:
               
chr8:15788029-15787891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
74, 59
               

               
Conread position:
               
198-354
               

               
Cow position:
               
chr8:8784036-8784181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
8, 0
               

               
Conread position:
               
198-394
               

               
Cow position:
               
chr8:1679546-1679742 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
176, 16
               

               
Conread position:
               
199-361
               

               
Cow position:
               
chr8:48454590-48454752 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
6, 61
               

               
Conread position:
               
206-319
               

               
Cow position:
               
chr8:19946946-19946833 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
115
               

               
Alignm identity:
               
95
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
66, 51
               

               
Conread position:
               
206-386
               

               
Cow position:
               
chr8:1443213-1443036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
207-322
               

               
Cow position:
               
chr8:9293188-9293073 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
117
               

               
Alignm identity:
               
95
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
65, 50
               

               
Conread position:
               
207-354
               

               
Cow position:
               
chr8:21986675-21986534 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
207-364
               

               
Cow position:
               
chr8:31732268-31732114 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
109, 51
               

               
Conread position:
               
207-390
               

               
Cow position:
               
chr8:25386862-25386678 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
167, 99
               

               
Conread position:
               
208-319
               

               
Cow position:
               
chr8:37442083-37441975 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
112
               

               
Alignm identity:
               
94
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
208-394
               

               
Cow position:
               
chr8:45561893-45562084 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
86, 54
               

               
Conread position:
               
211-389
               

               
Cow position:
               
chr8:24959668-24959489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
30, 95
               

               
Conread position:
               
222-394
               

               
Cow position:
               
chr8:45558544-45558718 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
50, 35
               

               
Conread position:
               
224-394
               

               
Cow position:
               
chr8:40114659-40114494 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
157, 82
               

               
Conread position:
               
225-394
               

               
Cow position:
               
chr8:49986903-49987074 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
47, 31
               

               
Conread position:
               
230-389
               

               
Cow position:
               
chr8:2957901-2957743 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
42, 27
               

               
Conread position:
               
177-394
               

               
Cow position:
               
chr9:55033396-55033179 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
95, 9
               

               
Conread position:
               
196-368
               

               
Cow position:
               
chr9:6594530-6594360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
73, 94
               

               
Conread position:
               
197-368
               

               
Cow position:
               
chr9:56929110-56928945 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
124, 20
               

               
Conread position:
               
197-386
               

               
Cow position:
               
chr9:10773100-10772912 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
34, 61
               

               
Conread position:
               
197-394
               

               
Cow position:
               
chr9:34315367-34315159 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
8, 120
               

               
Conread position:
               
198-331
               

               
Cow position:
               
chr9:60189555-60189423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
21, 53
               

               
Conread position:
               
198-371
               

               
Cow position:
               
chr9:36602824-36602656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
143, 16
               

               
Conread position:
               
198-386
               

               
Cow position:
               
chr9:32609057-32609242 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
74, 44
               

               
Conread position:
               
198-387
               

               
Cow position:
               
chr9:11418105-11418292 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
134, 59
               

               
Conread position:
               
198-389
               

               
Cow position:
               
chr9:8203829-8204019 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
74, 37
               

               
Conread position:
               
198-390
               

               
Cow position:
               
chr9:6316903-6317101 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
119, 8
               

               
Conread position:
               
198-393
               

               
Cow position:
               
chr9:6655846-6656040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
7, 17
               

               
Conread position:
               
198-394
               

               
Cow position:
               
chr9:44559795-44559992 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
21, 60
               

               
Conread position:
               
198-396
               

               
Cow position:
               
chr9:60816748-60816553 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
74, 32
               

               
Conread position:
               
199-368
               

               
Cow position:
               
chr9:64600552-64600385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
18, 7
               

               
Conread position:
               
206-366
               

               
Cow position:
               
chr9:34701000-34700845 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
11, 38
               

               
Conread position:
               
206-386
               

               
Cow position:
               
chr9:47438723-47438902 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
66, 48
               

               
Conread position:
               
206-394
               

               
Cow position:
               
chr9:63411084-63411274 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
126, 113
               

               
Conread position:
               
207-368
               

               
Cow position:
               
chr9:12363975-12364133 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
65, 23
               

               
Conread position:
               
207-386
               

               
Cow position:
               
chr9:7094199-7094022 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
66, 22
               

               
Conread position:
               
207-394
               

               
Cow position:
               
chr9:11315922-11315734 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
155, 97
               

               
Conread position:
               
207-394
               

               
Cow position:
               
chr9:20984281-20984093 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
65, 8
               

               
Conread position:
               
207-394
               

               
Cow position:
               
chr9:48610297-48610486 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
65, 49
               

               
Conread position:
               
208-354
               

               
Cow position:
               
chr9:9391136-9390994 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
64, 29
               

               
Conread position:
               
208-390
               

               
Cow position:
               
chr9:62635083-62635266 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
62, 28
               

               
Conread position:
               
208-392
               

               
Cow position:
               
chr9:25032404-25032587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
166, 50
               

               
Conread position:
               
208-394
               

               
Cow position:
               
chr9:6164080-6163886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
108, 98
               

               
Conread position:
               
209-366
               

               
Cow position:
               
chr9:10896485-10896639 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
218-394
               

               
Cow position:
               
chr9:9561699-9561876 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
52, 38
               

               
Conread position:
               
220-359
               

               
Cow position:
               
chr9:10894668-10894533 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
5, 0
               

               
Conread position:
               
231-389
               

               
Cow position:
               
chr9:12861118-12861277 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
101, 26
               

               
Conread position:
               
233-394
               

               
Cow position:
               
chr9:31583594-31583756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
39, 23
               

               
Conread position:
               
196-394
               

               
Cow position:
               
chrX:38138904-38139097 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
76, 10
               

               
Conread position:
               
197-353
               

               
Cow position:
               
chrX:38630883-38630733 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
198-368
               

               
Cow position:
               
chrX:42066619-42066449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
74, 59
               

               
Conread position:
               
198-368
               

               
Cow position:
               
chrX:42558538-42558370 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
74, 8
               

               
Conread position:
               
198-386
               

               
Cow position:
               
chrX:11840548-11840735 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
74, 58
               

               
Conread position:
               
198-386
               

               
Cow position:
               
chrX:42051252-42051064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
75, 9
               

               
Conread position:
               
198-394
               

               
Cow position:
               
chrX:25219324-25219130 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
165, 8
               

               
Conread position:
               
204-394
               

               
Cow position:
               
chrX:31918953-31919141 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
179, 54
               

               
Conread position:
               
206-386
               

               
Cow position:
               
chrX:29901512-29901331 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
115, 51
               

               
Conread position:
               
206-394
               

               
Cow position:
               
chrX:803070-802879 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
41, 62
               

               
Conread position:
               
206-394
               

               
Cow position:
               
chrX:37241742-37241556 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
66, 51
               

               
Conread position:
               
206-394
               

               
Cow position:
               
chrX:39427306-39427496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
66, 50
               

               
Conread position:
               
207-315
               

               
Cow position:
               
chrX:24619972-24620081 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
111
               

               
Alignm identity:
               
92
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
46, 51
               

               
Conread position:
               
207-366
               

               
Cow position:
               
chrX:11810012-11810171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
125, 50
               

               
Conread position:
               
207-367
               

               
Cow position:
               
chrX:6054531-6054692 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
110, 49
               

               
Conread position:
               
207-386
               

               
Cow position:
               
chrX:44191556-44191735 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
65, 12
               

               
Conread position:
               
207-394
               

               
Cow position:
               
chrX:23364109-23364298 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
65, 56
               

               
Conread position:
               
207-394
               

               
Cow position:
               
chrX:42549924-42549737 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
176, 99
               

               
Conread position:
               
207-394
               

               
Cow position:
               
chrX:42559202-42559396 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
33, 51
               

               
Conread position:
               
207-406
               

               
Cow position:
               
chrX:45755633-45755438 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
65, 33
               

               
Conread position:
               
208-366
               

               
Cow position:
               
chrX:40597085-40597238 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
9, 26
               

               
Conread position:
               
209-390
               

               
Cow position:
               
chrX:1340316-1340493 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
108, 84
               

               
Conread position:
               
209-394
               

               
Cow position:
               
chrX:31908757-31908942 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
167, 49
               

               
Conread position:
               
231-372
               

               
Cow position:
               
chrX:31465663-31465802 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
101, 26