Cow genome map

Conread name: Liv1-LVRM10156A07

Conread position: 1-114
Cow position: chr1:3752160-3752047 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 91
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 1-114
Cow position: chr1:53520688-53520802 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 93
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 78, 0

Conread position: 1-114
Cow position: chr1:100400420-100400307 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 89
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 1-121
Cow position: chr1:19545318-19545198 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 95
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 69, 108

Conread position: 1-123
Cow position: chr1:21954436-21954313 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 96
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 108, 0

Conread position: 1-123
Cow position: chr1:62996276-62996397 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 97
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 107, 0

Conread position: 1-123
Cow position: chr1:65637986-65638112 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 98
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 57, 0

Conread position: 1-123
Cow position: chr1:81180198-81180071 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 100
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 59, 0

Conread position: 1-123
Cow position: chr1:88911108-88910987 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 95
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 107, 0

Conread position: 1-123
Cow position: chr1:94212015-94212137 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 95
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 1-123
Cow position: chr1:94378815-94378935 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 98
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 44, 0

Conread position: 1-124
Cow position: chr1:3924012-3923891 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 99
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 35, 0

Conread position: 1-124
Cow position: chr1:4290940-4291064 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 101
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 109, 0

Conread position: 1-124
Cow position: chr1:35162185-35162313 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 101
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 62, 0

Conread position: 1-124
Cow position: chr1:36874797-36874918 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 96
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 27, 0

Conread position: 1-124
Cow position: chr1:42874165-42874043 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 95
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 107, 0

Conread position: 1-124
Cow position: chr1:52753384-52753259 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 98
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 112, 0

Conread position: 1-124
Cow position: chr1:57305614-57305739 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 98
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 112, 0

Conread position: 1-124
Cow position: chr1:68818016-68817895 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 99
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 16, 0

Conread position: 1-124
Cow position: chr1:76222909-76222785 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 99
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 113, 0

Conread position: 1-124
Cow position: chr1:87216244-87216365 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 98
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 40, 0

Conread position: 1-125
Cow position: chr1:634973-635099 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 97
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 112, 0

Conread position: 1-125
Cow position: chr1:3035211-3035088 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 96
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 107, 0

Conread position: 1-125
Cow position: chr1:4027643-4027772 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 104
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 59, 0

Conread position: 1-125
Cow position: chr1:4374557-4374435 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 100
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 94, 0

Conread position: 1-125
Cow position: chr1:4573302-4573426 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 99
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 66, 82

Conread position: 1-125
Cow position: chr1:15547250-15547375 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 98
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 108, 0

Conread position: 1-125
Cow position: chr1:22448805-22448682 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 97
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 106, 0

Conread position: 1-125
Cow position: chr1:22467712-22467837 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 103
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 116, 0

Conread position: 1-125
Cow position: chr1:25281894-25281771 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 101
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 67, 63

Conread position: 1-125
Cow position: chr1:31348659-31348535 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 104
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 1-125
Cow position: chr1:31414177-31414056 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 100
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 80, 0

Conread position: 1-125
Cow position: chr1:33719895-33720024 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 102
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 66, 0

Conread position: 1-125
Cow position: chr1:34159613-34159742 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 105
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 66, 0

Conread position: 1-125
Cow position: chr1:36931941-36932062 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 97
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 65, 0

Conread position: 1-125
Cow position: chr1:41696836-41696963 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 101
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 59, 111

Conread position: 1-125
Cow position: chr1:42968536-42968406 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 103
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 59, 0

Conread position: 1-125
Cow position: chr1:43380247-43380121 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 101
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 45, 0

Conread position: 1-125
Cow position: chr1:43389266-43389145 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 99
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 89, 0

Conread position: 1-125
Cow position: chr1:48105652-48105529 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 96
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 107, 0

Conread position: 1-125
Cow position: chr1:49839289-49839410 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 101
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 108, 0

Conread position: 1-125
Cow position: chr1:51445661-51445785 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 97
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 1-125
Cow position: chr1:52039418-52039541 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 98
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 107, 0

Conread position: 1-125
Cow position: chr1:52488179-52488056 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 101
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 110, 15

Conread position: 1-125
Cow position: chr1:54199601-54199477 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 98
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 108, 17

Conread position: 1-125
Cow position: chr1:55357504-55357380 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 96
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 1-125
Cow position: chr1:56229036-56229156 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 99
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 78, 0

Conread position: 1-125
Cow position: chr1:57900959-57900834 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 101
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 49, 109

Conread position: 1-125
Cow position: chr1:63390992-63390866 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 97
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 112, 0

Conread position: 1-125
Cow position: chr1:64804326-64804197 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 101
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 66, 0

Conread position: 1-125
Cow position: chr1:68845704-68845578 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 99
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 115, 0

Conread position: 1-125
Cow position: chr1:71748225-71748099 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 101
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 112, 0

Conread position: 1-125
Cow position: chr1:75744642-75744765 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 101
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 107, 0

Conread position: 1-125
Cow position: chr1:78794954-78794829 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 99
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 93, 0

Conread position: 1-125
Cow position: chr1:79165309-79165180 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 103
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 52, 0

Conread position: 1-125
Cow position: chr1:80988128-80988254 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 102
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 109, 0

Conread position: 1-125
Cow position: chr1:91816992-91816863 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 101
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 57, 0

Conread position: 1-125
Cow position: chr1:96964102-96964225 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 96
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 100, 0

Conread position: 1-125
Cow position: chr1:98558002-98557871 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 104
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 61, 0

Conread position: 1-127
Cow position: chr1:33811716-33811836 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 103
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 56, 0

Conread position: 1-127
Cow position: chr1:44506750-44506875 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 102
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 17, 0

Conread position: 1-127
Cow position: chr1:98708224-98708347 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 98
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 65, 0

Conread position: 1-128
Cow position: chr1:19482291-19482167 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 102
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 58, 0

Conread position: 1-128
Cow position: chr1:39418337-39418214 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 99
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 61, 0

Conread position: 1-135
Cow position: chr1:26896043-26895904 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 108
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 105, 68

Conread position: 2-122
Cow position: chr1:84786553-84786678 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 100
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 58, 0

Conread position: 2-123
Cow position: chr1:20384838-20384717 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 97
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 65, 107

Conread position: 2-123
Cow position: chr1:37309728-37309610 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 96
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 82, 0

Conread position: 2-125
Cow position: chr1:23634118-23633999 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 99
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 56, 0

Conread position: 2-125
Cow position: chr1:24655742-24655868 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 102
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 73, 0

Conread position: 3-123
Cow position: chr1:67821426-67821308 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 95
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 90, 0

Conread position: 3-125
Cow position: chr1:11770510-11770385 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 101
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 60, 0

Conread position: 4-125
Cow position: chr1:45535486-45535610 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 100
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 63, 118

Conread position: 11-125
Cow position: chr1:82884598-82884485 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 91
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 97, 0

Conread position: 17-125
Cow position: chr1:28563771-28563662 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 93
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 92, 0

Conread position: 19-123
Cow position: chr1:6322010-6322114 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 85
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 24-125
Cow position: chr1:51654215-51654316 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 85
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 27-125
Cow position: chr1:82443649-82443551 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 86
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 1-111
Cow position: chr10:31027893-31027784 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 89
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 54, 0

Conread position: 1-114
Cow position: chr10:24752907-24753018 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 96
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 81, 0

Conread position: 1-123
Cow position: chr10:6345824-6345950 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 99
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 59, 0

Conread position: 1-124
Cow position: chr10:5543498-5543370 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 100
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 57, 0

Conread position: 1-124
Cow position: chr10:31401147-31401021 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 102
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 66, 111

Conread position: 1-124
Cow position: chr10:37529518-37529392 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 102
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 57, 111

Conread position: 1-124
Cow position: chr10:58259764-58259642 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 95
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 107, 0

Conread position: 1-125
Cow position: chr10:2849106-2849231 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 97
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 107, 0

Conread position: 1-125
Cow position: chr10:4310939-4311064 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 99
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 95, 0

Conread position: 1-125
Cow position: chr10:5264451-5264573 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 100
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 88, 0

Conread position: 1-125
Cow position: chr10:9798442-9798323 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 105
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 59, 0

Conread position: 1-125
Cow position: chr10:10699759-10699633 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 100
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 110, 0

Conread position: 1-125
Cow position: chr10:15293023-15293150 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 106
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 69, 23

Conread position: 1-125
Cow position: chr10:15818045-15817918 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 102
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 66, 111

Conread position: 1-125
Cow position: chr10:16598440-16598561 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 100
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 65, 0

Conread position: 1-125
Cow position: chr10:16740306-16740180 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 100
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 112, 0

Conread position: 1-125
Cow position: chr10:17982934-17983060 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 99
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 106, 0

Conread position: 1-125
Cow position: chr10:18041936-18042062 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 104
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 114, 0

Conread position: 1-125
Cow position: chr10:19094399-19094523 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 97
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 114, 30

Conread position: 1-125
Cow position: chr10:19402686-19402810 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 100
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 1-125
Cow position: chr10:19895150-19895271 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 101
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 108, 0

Conread position: 1-125
Cow position: chr10:21461992-21462113 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 100
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 38, 0

Conread position: 1-125
Cow position: chr10:22049004-22049135 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 109
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 62, 0

Conread position: 1-125
Cow position: chr10:23912745-23912620 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 98
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 108, 0

Conread position: 1-125
Cow position: chr10:24870916-24871040 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 96
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 1-125
Cow position: chr10:25509450-25509574 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 98
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 69, 108

Conread position: 1-125
Cow position: chr10:26209510-26209383 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 100
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 66, 0

Conread position: 1-125
Cow position: chr10:29251913-29252040 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 103
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 59, 110

Conread position: 1-125
Cow position: chr10:29628199-29628071 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 100
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 66, 0

Conread position: 1-125
Cow position: chr10:30914248-30914374 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 98
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 112, 0

Conread position: 1-125
Cow position: chr10:32503201-32503323 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 97
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 66, 0

Conread position: 1-125
Cow position: chr10:35715959-35715834 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 100
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 69, 109

Conread position: 1-125
Cow position: chr10:35857303-35857180 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 102
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 34, 16

Conread position: 1-125
Cow position: chr10:37528854-37528730 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 101
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 72, 57

Conread position: 1-125
Cow position: chr10:41737057-41737183 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 98
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 108, 0

Conread position: 1-125
Cow position: chr10:42230416-42230535 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 98
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 63, 0

Conread position: 1-125
Cow position: chr10:43451168-43451038 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 102
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 57, 0

Conread position: 1-125
Cow position: chr10:45370806-45370929 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 96
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 107, 0

Conread position: 1-125
Cow position: chr10:48462587-48462463 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 100
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 1-125
Cow position: chr10:49169306-49169178 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 101
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 62, 0

Conread position: 1-125
Cow position: chr10:49568956-49569078 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 103
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 85, 0

Conread position: 1-125
Cow position: chr10:49846527-49846650 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 97
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 106, 0

Conread position: 1-125
Cow position: chr10:50183296-50183174 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 99
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 54, 0

Conread position: 1-125
Cow position: chr10:51306077-51306207 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 109
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 59, 0

Conread position: 1-125
Cow position: chr10:52296248-52296375 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 103
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 56, 111

Conread position: 1-125
Cow position: chr10:54936361-54936235 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 101
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 112, 0

Conread position: 1-125
Cow position: chr10:56475220-56475341 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 98
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 80, 0

Conread position: 1-125
Cow position: chr10:59152112-59151989 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 103
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 48, 55

Conread position: 1-125
Cow position: chr10:59588416-59588292 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 99
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 1-125
Cow position: chr10:59839534-59839408 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 102
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 70, 58

Conread position: 1-125
Cow position: chr10:61305032-61305156 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 98
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 1-125
Cow position: chr10:63276142-63276267 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 101
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 111, 54

Conread position: 1-125
Cow position: chr10:64182201-64182326 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 99
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 66, 0

Conread position: 1-125
Cow position: chr10:65071062-65071187 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 99
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 108, 0

Conread position: 1-127
Cow position: chr10:56835030-56835160 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 101
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 66, 0

Conread position: 1-128
Cow position: chr10:31266577-31266451 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 99
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 87, 65

Conread position: 1-128
Cow position: chr10:33891336-33891209 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 100
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 112, 84

Conread position: 1-141
Cow position: chr10:33867629-33867491 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 105
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 40, 0

Conread position: 1-180
Cow position: chr10:1719776-1719586 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 141
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 59, 45

Conread position: 2-113
Cow position: chr10:24153246-24153135 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 91
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 2-125
Cow position: chr10:20505291-20505414 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 98
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 2-125
Cow position: chr10:32093555-32093678 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 97
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 3-125
Cow position: chr10:888679-888800 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 95
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 83, 0

Conread position: 3-125
Cow position: chr10:54848532-54848651 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 97
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 14, 0

Conread position: 5-125
Cow position: chr10:6173115-6173233 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 95
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 89, 0

Conread position: 5-125
Cow position: chr10:7367034-7366911 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 100
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 55, 105

Conread position: 5-125
Cow position: chr10:37235798-37235675 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 102
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 55, 107

Conread position: 11-115
Cow position: chr10:29589079-29588975 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 85
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 11-124
Cow position: chr10:34554327-34554213 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 93
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 105, 0

Conread position: 11-125
Cow position: chr10:22390350-22390463 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 96
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 97, 0

Conread position: 11-125
Cow position: chr10:60032816-60032698 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 96
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 52, 0

Conread position: 12-125
Cow position: chr10:1427802-1427918 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 95
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 43, 100

Conread position: 1-114
Cow position: chr11:17112870-17112761 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 95
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 63, 0

Conread position: 1-114
Cow position: chr11:27939243-27939356 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 89
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 1-114
Cow position: chr11:55117229-55117346 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 95
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 57, 0

Conread position: 1-114
Cow position: chr11:71309772-71309657 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 92
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 55, 0

Conread position: 1-123
Cow position: chr11:60302201-60302080 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 96
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 107, 0

Conread position: 1-124
Cow position: chr11:17860397-17860274 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 96
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 1-124
Cow position: chr11:19247438-19247316 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 98
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 108, 94

Conread position: 1-124
Cow position: chr11:40818882-40818758 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 98
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 110, 0

Conread position: 1-124
Cow position: chr11:48271951-48272077 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 100
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 67, 111

Conread position: 1-124
Cow position: chr11:48474465-48474583 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 99
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 31, 0

Conread position: 1-124
Cow position: chr11:53130568-53130691 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 98
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 1-124
Cow position: chr11:53778369-53778495 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 100
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 62, 83

Conread position: 1-124
Cow position: chr11:64029500-64029377 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 95
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 1-125
Cow position: chr11:377892-377763 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 104
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 59, 0

Conread position: 1-125
Cow position: chr11:1362724-1362595 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 101
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 59, 0

Conread position: 1-125
Cow position: chr11:1486110-1485985 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 96
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 114, 0

Conread position: 1-125
Cow position: chr11:7924833-7924701 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 106
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 59, 0

Conread position: 1-125
Cow position: chr11:8105539-8105663 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 99
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 1-125
Cow position: chr11:8339648-8339525 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 96
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 107, 0

Conread position: 1-125
Cow position: chr11:8988473-8988348 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 102
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 51, 110

Conread position: 1-125
Cow position: chr11:9234384-9234511 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 103
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 70, 0

Conread position: 1-125
Cow position: chr11:11125420-11125543 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 97
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 107, 0

Conread position: 1-125
Cow position: chr11:16342485-16342360 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 103
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 66, 109

Conread position: 1-125
Cow position: chr11:20761601-20761727 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 100
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 62, 110

Conread position: 1-125
Cow position: chr11:25165200-25165323 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 98
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 107, 0

Conread position: 1-125
Cow position: chr11:25783248-25783374 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 98
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 112, 0

Conread position: 1-125
Cow position: chr11:29947170-29947050 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 98
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 98, 0

Conread position: 1-125
Cow position: chr11:30120905-30120785 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 98
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 80, 0

Conread position: 1-125
Cow position: chr11:30924909-30925031 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 98
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 66, 0

Conread position: 1-125
Cow position: chr11:34032441-34032321 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 98
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 58, 0

Conread position: 1-125
Cow position: chr11:35363251-35363379 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 103
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 59, 0

Conread position: 1-125
Cow position: chr11:35881668-35881791 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 96
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 107, 0

Conread position: 1-125
Cow position: chr11:36986718-36986847 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 102
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 59, 0

Conread position: 1-125
Cow position: chr11:37118242-37118370 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 106
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 59, 23

Conread position: 1-125
Cow position: chr11:44642529-44642406 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 99
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 107, 0

Conread position: 1-125
Cow position: chr11:47899033-47899160 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 102
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 59, 111

Conread position: 1-125
Cow position: chr11:48697204-48697330 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 97
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 113, 0

Conread position: 1-125
Cow position: chr11:48901321-48901198 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 98
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 105, 0

Conread position: 1-125
Cow position: chr11:48932827-48932704 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 98
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 107, 0

Conread position: 1-125
Cow position: chr11:62155383-62155507 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 102
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 109, 49

Conread position: 1-125
Cow position: chr11:62808892-62808768 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 96
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 1-125
Cow position: chr11:71846592-71846465 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 104
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 59, 110

Conread position: 1-125
Cow position: chr11:73924802-73924679 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 99
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 107, 0

Conread position: 1-125
Cow position: chr11:75748191-75748315 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 101
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 1-125
Cow position: chr11:77759004-77758875 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 105
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 59, 105

Conread position: 1-125
Cow position: chr11:79728917-79728788 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 102
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 59, 0

Conread position: 1-125
Cow position: chr11:81174646-81174771 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 100
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 69, 0

Conread position: 1-127
Cow position: chr11:63482669-63482543 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 101
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 1-127
Cow position: chr11:68207081-68206956 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 97
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 106, 0

Conread position: 1-131
Cow position: chr11:17192525-17192396 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 99
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 107, 0

Conread position: 1-135
Cow position: chr11:17036796-17036658 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 104
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 59, 0

Conread position: 1-164
Cow position: chr11:10095100-10095267 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 129
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 25, 140

Conread position: 1-164
Cow position: chr11:58990267-58990430 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 120
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 128, 153

Conread position: 2-125
Cow position: chr11:30879437-30879564 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 99
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 63, 0

Conread position: 2-125
Cow position: chr11:58588102-58588228 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 101
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 58, 110

Conread position: 2-125
Cow position: chr11:68910090-68909969 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 96
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 80, 0

Conread position: 3-125
Cow position: chr11:34616027-34616151 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 99
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 110, 0

Conread position: 3-127
Cow position: chr11:52381112-52380991 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 98
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 79, 0

Conread position: 10-125
Cow position: chr11:25620630-25620515 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 91
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 11-124
Cow position: chr11:51144484-51144597 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 94
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 69, 98

Conread position: 15-124
Cow position: chr11:44234125-44234233 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 88
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 92, 0

Conread position: 1-106
Cow position: chr12:20283647-20283751 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 86
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 81, 0

Conread position: 1-114
Cow position: chr12:35218668-35218556 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 90
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 68, 0

Conread position: 1-115
Cow position: chr12:29119636-29119750 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 90
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 1-122
Cow position: chr12:19039875-19039753 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 96
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 48, 58

Conread position: 1-122
Cow position: chr12:29484153-29484033 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 99
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 49, 60

Conread position: 1-123
Cow position: chr12:4866551-4866672 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 96
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 107, 0

Conread position: 1-123
Cow position: chr12:12178658-12178780 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 98
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 66, 82

Conread position: 1-123
Cow position: chr12:40110126-40110244 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 97
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 66, 0

Conread position: 1-124
Cow position: chr12:25561107-25561231 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 101
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 66, 107

Conread position: 1-124
Cow position: chr12:40910554-40910430 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 100
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 60, 109

Conread position: 1-125
Cow position: chr12:2711229-2711356 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 100
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 112, 0

Conread position: 1-125
Cow position: chr12:7108925-7109051 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 102
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 112, 0

Conread position: 1-125
Cow position: chr12:12017613-12017740 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 102
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 66, 0

Conread position: 1-125
Cow position: chr12:19508835-19508705 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 102
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 54, 0

Conread position: 1-125
Cow position: chr12:30662213-30662087 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 99
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 17, 0

Conread position: 1-125
Cow position: chr12:31228311-31228434 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 95
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 106, 0

Conread position: 1-125
Cow position: chr12:34385777-34385653 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 97
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 35, 73

Conread position: 1-125
Cow position: chr12:36954638-36954514 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 100
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 1-125
Cow position: chr12:37123250-37123371 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 98
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 30, 0

Conread position: 1-125
Cow position: chr12:42966737-42966858 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 100
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 108, 0

Conread position: 1-125
Cow position: chr12:44014103-44013973 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 104
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 62, 0

Conread position: 1-125
Cow position: chr12:44517998-44517875 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 99
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 23, 0

Conread position: 1-127
Cow position: chr12:25320660-25320784 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 97
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 65, 0

Conread position: 1-128
Cow position: chr12:17495455-17495328 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 97
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 1-128
Cow position: chr12:18572378-18572505 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 100
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 1-128
Cow position: chr12:19502683-19502553 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 101
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 62, 110

Conread position: 1-141
Cow position: chr12:24107801-24107661 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 108
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 47, 60

Conread position: 2-125
Cow position: chr12:26782619-26782748 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 102
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 58, 0

Conread position: 5-125
Cow position: chr12:26869058-26868934 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 100
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 55, 0

Conread position: 7-125
Cow position: chr12:28650695-28650815 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 98
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 53, 91

Conread position: 11-124
Cow position: chr12:29969323-29969440 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 93
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 47, 0

Conread position: 11-125
Cow position: chr12:28011152-28011039 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 92
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 99, 0

Conread position: 1-111
Cow position: chr13:20605909-20606019 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 90
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 1-111
Cow position: chr13:51821682-51821790 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 90
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 94, 0

Conread position: 1-114
Cow position: chr13:1780043-1779930 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 91
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 1-121
Cow position: chr13:26261584-26261708 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 102
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 59, 0

Conread position: 1-121
Cow position: chr13:37069559-37069440 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 94
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 107, 0

Conread position: 1-122
Cow position: chr13:58043839-58043716 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 99
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 113, 0

Conread position: 1-123
Cow position: chr13:25531578-25531699 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 99
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 107, 0

Conread position: 1-123
Cow position: chr13:29671229-29671352 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 97
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 116, 0

Conread position: 1-123
Cow position: chr13:33875872-33875755 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 99
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 65, 0

Conread position: 1-123
Cow position: chr13:45022998-45023123 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 100
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 59, 111

Conread position: 1-123
Cow position: chr13:61166248-61166370 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 100
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 46, 39

Conread position: 1-124
Cow position: chr13:5091451-5091578 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 99
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 62, 0

Conread position: 1-125
Cow position: chr13:1042746-1042879 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 105
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 57, 0

Conread position: 1-125
Cow position: chr13:1155498-1155621 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 96
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 107, 0

Conread position: 1-125
Cow position: chr13:5263076-5263203 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 103
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 47, 84

Conread position: 1-125
Cow position: chr13:12202575-12202453 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 98
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 84, 0

Conread position: 1-125
Cow position: chr13:14927449-14927322 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 101
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 59, 111

Conread position: 1-125
Cow position: chr13:15869329-15869209 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 98
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 40, 0

Conread position: 1-125
Cow position: chr13:17800282-17800159 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 96
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 107, 0

Conread position: 1-125
Cow position: chr13:18166940-18166820 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 98
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 80, 0

Conread position: 1-125
Cow position: chr13:21235475-21235600 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 100
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 69, 109

Conread position: 1-125
Cow position: chr13:23166886-23167010 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 95
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 1-125
Cow position: chr13:23270003-23270125 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 96
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 81, 0

Conread position: 1-125
Cow position: chr13:24369794-24369667 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 102
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 59, 111

Conread position: 1-125
Cow position: chr13:25927002-25926877 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 100
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 113, 0

Conread position: 1-125
Cow position: chr13:33352157-33352278 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 99
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 94, 0

Conread position: 1-125
Cow position: chr13:33517714-33517836 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 103
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 108, 0

Conread position: 1-125
Cow position: chr13:34508086-34507957 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 106
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 59, 0

Conread position: 1-125
Cow position: chr13:37516926-37517050 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 96
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 1-125
Cow position: chr13:44323112-44322987 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 98
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 66, 109

Conread position: 1-125
Cow position: chr13:45353256-45353130 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 101
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 111, 0

Conread position: 1-125
Cow position: chr13:54344986-54344858 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 100
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 62, 0

Conread position: 1-125
Cow position: chr13:60429868-60429988 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 97
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 63, 0

Conread position: 1-127
Cow position: chr13:60690512-60690642 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 103
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 67, 0

Conread position: 1-128
Cow position: chr13:12244806-12244934 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 98
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 113, 0

Conread position: 1-128
Cow position: chr13:21276065-21275939 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 110
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 124, 0

Conread position: 1-128
Cow position: chr13:38277927-38278051 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 100
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 81, 0

Conread position: 1-128
Cow position: chr13:60974288-60974166 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 105
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 54, 0

Conread position: 1-131
Cow position: chr13:21039388-21039519 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 100
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 104, 0

Conread position: 1-132
Cow position: chr13:34728627-34728756 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 103
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 107, 0

Conread position: 1-135
Cow position: chr13:34052391-34052525 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 102
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 1-135
Cow position: chr13:37981542-37981671 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 106
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 82, 65

Conread position: 1-141
Cow position: chr13:18989915-18989777 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 105
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 93, 0

Conread position: 2-107
Cow position: chr13:14576879-14576774 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 85
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 2-125
Cow position: chr13:2339639-2339516 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 95
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 2-125
Cow position: chr13:46181998-46181878 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 99
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 98, 0

Conread position: 2-134
Cow position: chr13:53308707-53308571 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 103
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 56, 0

Conread position: 5-114
Cow position: chr13:20530935-20531044 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 87
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 20-124
Cow position: chr13:57475225-57475329 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 85
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 1-111
Cow position: chr14:5836168-5836058 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 88
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 1-114
Cow position: chr14:12856864-12856751 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 89
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 1-119
Cow position: chr14:19513109-19513227 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 95
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 1-119
Cow position: chr14:41128161-41128042 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 94
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 78, 0

Conread position: 1-123
Cow position: chr14:41211124-41210999 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 101
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 59, 111

Conread position: 1-123
Cow position: chr14:47609319-47609447 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 102
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 66, 0

Conread position: 1-124
Cow position: chr14:16834598-16834480 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 100
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 58, 0

Conread position: 1-125
Cow position: chr14:6490436-6490562 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 97
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 112, 0

Conread position: 1-125
Cow position: chr14:14466211-14466333 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 96
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 108, 0

Conread position: 1-125
Cow position: chr14:19129779-19129653 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 102
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 66, 82

Conread position: 1-125
Cow position: chr14:22989302-22989178 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 102
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 66, 96

Conread position: 1-125
Cow position: chr14:23712954-23712831 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 96
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 106, 0

Conread position: 1-125
Cow position: chr14:24894028-24893900 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 104
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 59, 0

Conread position: 1-125
Cow position: chr14:24922374-24922245 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 101
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 59, 0

Conread position: 1-125
Cow position: chr14:25695648-25695524 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 100
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 109, 57

Conread position: 1-125
Cow position: chr14:25779362-25779235 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 100
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 62, 111

Conread position: 1-125
Cow position: chr14:27312692-27312568 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 97
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 108, 38

Conread position: 1-125
Cow position: chr14:32452524-32452396 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 102
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 59, 0

Conread position: 1-125
Cow position: chr14:33247170-33247290 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 99
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 63, 0

Conread position: 1-125
Cow position: chr14:35018488-35018611 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 97
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 107, 0

Conread position: 1-125
Cow position: chr14:38143845-38143967 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 103
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 106, 0

Conread position: 1-125
Cow position: chr14:39779021-39778894 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 102
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 66, 111

Conread position: 1-125
Cow position: chr14:46965827-46965703 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 98
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 22, 108

Conread position: 1-127
Cow position: chr14:33538658-33538781 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 102
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 108, 76

Conread position: 1-128
Cow position: chr14:30662255-30662128 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 104
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 66, 82

Conread position: 1-129
Cow position: chr14:19986092-19985958 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 104
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 59, 0

Conread position: 1-135
Cow position: chr14:25385623-25385755 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 101
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 66, 0

Conread position: 1-141
Cow position: chr14:39926459-39926321 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 111
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 126, 66

Conread position: 1-141
Cow position: chr14:44557567-44557706 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 104
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 106, 0

Conread position: 11-124
Cow position: chr14:16310647-16310760 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 91
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 15-125
Cow position: chr14:24839921-24840032 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 90
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 99, 0

Conread position: 1-111
Cow position: chr15:14871060-14870946 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 93
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 59, 0

Conread position: 1-121
Cow position: chr15:25618265-25618384 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 96
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 107, 0

Conread position: 1-122
Cow position: chr15:21421256-21421132 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 99
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 108, 49

Conread position: 1-123
Cow position: chr15:22136996-22136874 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 101
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 1-123
Cow position: chr15:22751765-22751642 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 95
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 112, 0

Conread position: 1-123
Cow position: chr15:23332567-23332688 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 95
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 107, 0

Conread position: 1-124
Cow position: chr15:4501294-4501168 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 98
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 29, 0

Conread position: 1-124
Cow position: chr15:16823251-16823129 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 100
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 36, 58

Conread position: 1-125
Cow position: chr15:1298051-1297927 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 100
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 113, 89

Conread position: 1-125
Cow position: chr15:5234690-5234813 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 99
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 106, 0

Conread position: 1-125
Cow position: chr15:6082328-6082454 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 97
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 112, 0

Conread position: 1-125
Cow position: chr15:7430295-7430167 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 99
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 59, 0

Conread position: 1-125
Cow position: chr15:10846036-10845910 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 97
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 116, 0

Conread position: 1-125
Cow position: chr15:11995711-11995836 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 101
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 48, 59

Conread position: 1-125
Cow position: chr15:12316238-12316117 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 101
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 107, 0

Conread position: 1-125
Cow position: chr15:12723400-12723277 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 96
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 57, 0

Conread position: 1-125
Cow position: chr15:17100400-17100520 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 99
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 61, 0

Conread position: 1-125
Cow position: chr15:18206198-18206322 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 98
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 1-125
Cow position: chr15:18284556-18284427 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 101
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 56, 0

Conread position: 1-125
Cow position: chr15:19403292-19403171 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 98
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 40, 0

Conread position: 1-125
Cow position: chr15:20370149-20370266 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 101
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 64, 0

Conread position: 1-125
Cow position: chr15:21388850-21388978 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 100
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 28, 0

Conread position: 1-125
Cow position: chr15:21523104-21522977 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 100
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 54, 0

Conread position: 1-125
Cow position: chr15:22095435-22095316 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 100
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 63, 0

Conread position: 1-125
Cow position: chr15:22168372-22168248 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 95
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 1-125
Cow position: chr15:25208451-25208578 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 101
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 55, 111

Conread position: 1-125
Cow position: chr15:25584775-25584902 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 101
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 59, 111

Conread position: 1-125
Cow position: chr15:26158303-26158426 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 97
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 107, 0

Conread position: 1-125
Cow position: chr15:27972901-27973027 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 101
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 107, 0

Conread position: 1-125
Cow position: chr15:31857906-31857779 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 101
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 59, 111

Conread position: 1-125
Cow position: chr15:33976379-33976498 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 100
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 57, 0

Conread position: 1-125
Cow position: chr15:35642334-35642209 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 99
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 110, 0

Conread position: 1-125
Cow position: chr15:36618493-36618365 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 102
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 66, 0

Conread position: 1-125
Cow position: chr15:38394734-38394608 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 97
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 112, 0

Conread position: 1-125
Cow position: chr15:38883470-38883342 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 101
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 66, 0

Conread position: 1-125
Cow position: chr15:40009336-40009460 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 103
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 88, 108

Conread position: 1-125
Cow position: chr15:41583224-41583101 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 100
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 107, 0

Conread position: 1-127
Cow position: chr15:27281178-27281056 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 101
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 64, 0

Conread position: 2-125
Cow position: chr15:4535220-4535101 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 98
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 78, 0

Conread position: 2-125
Cow position: chr15:23767952-23768074 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 101
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 111, 58

Conread position: 2-125
Cow position: chr15:41619873-41619997 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 98
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 16, 0

Conread position: 3-124
Cow position: chr15:13285346-13285228 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 98
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 63, 0

Conread position: 3-125
Cow position: chr15:26911767-26911886 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 101
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 57, 81

Conread position: 4-114
Cow position: chr15:45245239-45245346 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 91
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 20, 0

Conread position: 17-124
Cow position: chr15:5071802-5071909 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 87
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 1-107
Cow position: chr16:16177593-16177699 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 90
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 1-111
Cow position: chr16:49126409-49126300 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 90
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 63, 0

Conread position: 1-112
Cow position: chr16:32327427-32327538 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 88
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 1-114
Cow position: chr16:15370454-15370567 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 89
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 1-114
Cow position: chr16:18354177-18354064 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 96
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 1-121
Cow position: chr16:7665406-7665531 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 99
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 55, 0

Conread position: 1-123
Cow position: chr16:7619421-7619299 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 100
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 112, 57

Conread position: 1-123
Cow position: chr16:12361197-12361080 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 98
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 68, 0

Conread position: 1-123
Cow position: chr16:23563912-23564033 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 96
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 73, 0

Conread position: 1-124
Cow position: chr16:4103382-4103261 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 99
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 27, 0

Conread position: 1-124
Cow position: chr16:11100022-11099897 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 97
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 108, 0

Conread position: 1-124
Cow position: chr16:11274684-11274812 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 100
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 64, 0

Conread position: 1-124
Cow position: chr16:26342052-26342172 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 97
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 54, 0

Conread position: 1-124
Cow position: chr16:27249184-27249308 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 97
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 24, 0

Conread position: 1-124
Cow position: chr16:49169608-49169488 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 98
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 61, 0

Conread position: 1-125
Cow position: chr16:820026-820147 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 97
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 78, 0

Conread position: 1-125
Cow position: chr16:5293437-5293562 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 102
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 66, 109

Conread position: 1-125
Cow position: chr16:5845446-5845569 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 97
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 7, 0

Conread position: 1-125
Cow position: chr16:7152398-7152273 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 99
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 87, 0

Conread position: 1-125
Cow position: chr16:11775275-11775150 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 96
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 108, 0

Conread position: 1-125
Cow position: chr16:13791288-13791416 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 103
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 59, 0

Conread position: 1-125
Cow position: chr16:16096512-16096635 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 97
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 52, 0

Conread position: 1-125
Cow position: chr16:17745610-17745732 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 97
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 105, 0

Conread position: 1-125
Cow position: chr16:20634103-20633980 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 98
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 107, 0

Conread position: 1-125
Cow position: chr16:22868400-22868274 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 100
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 108, 0

Conread position: 1-125
Cow position: chr16:26610408-26610539 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 104
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 60, 0

Conread position: 1-125
Cow position: chr16:29066943-29067067 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 99
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 1-125
Cow position: chr16:29557856-29557729 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 101
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 59, 111

Conread position: 1-125
Cow position: chr16:30311334-30311211 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 100
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 54, 0

Conread position: 1-125
Cow position: chr16:30939508-30939632 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 96
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 1-125
Cow position: chr16:31159803-31159673 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 104
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 59, 0

Conread position: 1-125
Cow position: chr16:32132303-32132424 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 100
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 40, 0

Conread position: 1-125
Cow position: chr16:34168370-34168496 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 98
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 112, 0

Conread position: 1-125
Cow position: chr16:39695702-39695572 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 102
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 59, 0

Conread position: 1-125
Cow position: chr16:43105738-43105614 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 95
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 1-125
Cow position: chr16:43308794-43308663 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 103
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 67, 0

Conread position: 1-125
Cow position: chr16:43804272-43804396 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 100
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 1-125
Cow position: chr16:51531198-51531072 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 100
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 56, 51

Conread position: 1-125
Cow position: chr16:52889635-52889510 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 100
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 69, 122

Conread position: 1-127
Cow position: chr16:5726701-5726823 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 101
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 52, 0

Conread position: 1-127
Cow position: chr16:41752798-41752672 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 102
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 83, 108

Conread position: 1-127
Cow position: chr16:47336505-47336632 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 101
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 108, 0

Conread position: 3-125
Cow position: chr16:24672583-24672456 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 102
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 57, 17

Conread position: 5-124
Cow position: chr16:8807311-8807193 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 96
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 50, 0

Conread position: 11-124
Cow position: chr16:45677067-45676955 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 90
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 97, 0

Conread position: 12-125
Cow position: chr16:14758516-14758632 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 96
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 59, 34

Conread position: 24-125
Cow position: chr16:15867931-15867830 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 83
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 1-113
Cow position: chr17:7423625-7423513 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 88
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 1-114
Cow position: chr17:15664485-15664597 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 91
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 56, 0

Conread position: 1-114
Cow position: chr17:18884533-18884414 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 100
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 41, 0

Conread position: 1-121
Cow position: chr17:44108679-44108558 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 95
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 59, 0

Conread position: 1-122
Cow position: chr17:7760647-7760528 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 98
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 60, 77

Conread position: 1-123
Cow position: chr17:40312537-40312664 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 101
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 59, 0

Conread position: 1-124
Cow position: chr17:9565125-9565248 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 94
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 1-124
Cow position: chr17:20269418-20269540 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 95
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 107, 0

Conread position: 1-125
Cow position: chr17:242452-242577 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 97
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 97, 0

Conread position: 1-125
Cow position: chr17:908562-908684 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 97
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 101, 0

Conread position: 1-125
Cow position: chr17:966923-966799 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 100
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 1-125
Cow position: chr17:3306683-3306806 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 95
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 107, 0

Conread position: 1-125
Cow position: chr17:3471237-3471360 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 96
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 53, 0

Conread position: 1-125
Cow position: chr17:3781861-3781984 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 100
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 107, 0

Conread position: 1-125
Cow position: chr17:4436415-4436293 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 100
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 95, 0

Conread position: 1-125
Cow position: chr17:6624074-6624198 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 98
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 1-125
Cow position: chr17:6936847-6936723 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 100
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 111, 57

Conread position: 1-125
Cow position: chr17:7132639-7132511 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 105
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 57, 0

Conread position: 1-125
Cow position: chr17:8544122-8544247 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 96
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 112, 0

Conread position: 1-125
Cow position: chr17:9746334-9746454 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 99
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 85, 0

Conread position: 1-125
Cow position: chr17:11281290-11281167 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 95
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 30, 0

Conread position: 1-125
Cow position: chr17:16117612-16117483 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 105
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 59, 0

Conread position: 1-125
Cow position: chr17:18860903-18860783 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 98
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 89, 0

Conread position: 1-125
Cow position: chr17:20993223-20993100 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 101
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 54, 0

Conread position: 1-125
Cow position: chr17:21335882-21335755 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 101
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 55, 111

Conread position: 1-125
Cow position: chr17:22781503-22781631 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 101
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 59, 0

Conread position: 1-125
Cow position: chr17:35311237-35311370 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 105
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 66, 0

Conread position: 1-125
Cow position: chr17:36454948-36454825 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 97
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 112, 18

Conread position: 1-126
Cow position: chr17:11056558-11056430 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 102
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 54, 0

Conread position: 1-127
Cow position: chr17:20358694-20358817 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 97
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 31, 0

Conread position: 1-128
Cow position: chr17:3182769-3182643 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 102
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 61, 107

Conread position: 1-128
Cow position: chr17:14033828-14033699 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 103
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 62, 111

Conread position: 1-128
Cow position: chr17:20932144-20932271 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 98
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 17, 121

Conread position: 1-128
Cow position: chr17:29715370-29715244 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 97
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 107, 0

Conread position: 1-134
Cow position: chr17:4213572-4213712 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 110
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 59, 113

Conread position: 2-125
Cow position: chr17:1295754-1295630 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 95
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 112, 0

Conread position: 2-125
Cow position: chr17:13143873-13143751 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 98
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 106, 0

Conread position: 3-125
Cow position: chr17:5246713-5246837 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 98
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 109, 0

Conread position: 5-124
Cow position: chr17:7697873-7697996 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 99
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 55, 0

Conread position: 5-125
Cow position: chr17:33052683-33052799 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 95
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 61, 0

Conread position: 11-123
Cow position: chr17:24077228-24077341 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 95
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 68, 14

Conread position: 17-125
Cow position: chr17:20839729-20839621 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 87
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 1-108
Cow position: chr18:9818579-9818686 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 87
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 1-112
Cow position: chr18:2569544-2569658 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 96
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 59, 92

Conread position: 1-120
Cow position: chr18:21195595-21195477 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 93
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 106, 0

Conread position: 1-123
Cow position: chr18:47868198-47868324 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 98
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 62, 0

Conread position: 1-124
Cow position: chr18:12023890-12023770 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 99
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 68, 0

Conread position: 1-124
Cow position: chr18:18958048-18957924 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 96
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 112, 0

Conread position: 1-125
Cow position: chr18:2592430-2592302 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 101
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 75, 0

Conread position: 1-125
Cow position: chr18:3115202-3115329 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 101
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 108, 0

Conread position: 1-125
Cow position: chr18:5711924-5711801 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 99
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 66, 0

Conread position: 1-125
Cow position: chr18:11166722-11166846 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 95
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 1-125
Cow position: chr18:22121139-22121015 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 101
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 63, 108

Conread position: 1-125
Cow position: chr18:23447339-23447215 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 98
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 1-125
Cow position: chr18:30794177-30794300 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 96
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 107, 0

Conread position: 1-125
Cow position: chr18:33606375-33606497 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 103
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 113, 63

Conread position: 1-125
Cow position: chr18:36097943-36098067 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 97
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 36, 107

Conread position: 1-125
Cow position: chr18:39115401-39115273 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 103
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 59, 0

Conread position: 1-125
Cow position: chr18:41270833-41270962 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 101
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 74, 0

Conread position: 1-125
Cow position: chr18:52402775-52402650 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 96
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 75, 0

Conread position: 1-125
Cow position: chr18:56159208-56159327 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 98
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 16, 0

Conread position: 1-126
Cow position: chr18:49660296-49660173 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 101
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 113, 85

Conread position: 1-128
Cow position: chr18:48290695-48290567 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 103
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 88, 0

Conread position: 2-125
Cow position: chr18:3422464-3422586 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 98
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 47, 73

Conread position: 3-125
Cow position: chr18:35076131-35076251 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 98
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 50, 0

Conread position: 5-125
Cow position: chr18:7058977-7059095 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 97
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 61, 0

Conread position: 27-125
Cow position: chr18:219101-219199 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 83
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 1-112
Cow position: chr19:4445856-4445745 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 88
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 1-121
Cow position: chr19:8212073-8211952 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 98
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 66, 82

Conread position: 1-121
Cow position: chr19:21042881-21043005 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 99
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 60, 0

Conread position: 1-124
Cow position: chr19:7492204-7492321 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 101
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 57, 0

Conread position: 1-124
Cow position: chr19:24956678-24956556 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 98
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 107, 0

Conread position: 1-124
Cow position: chr19:33468788-33468911 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 98
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 1-124
Cow position: chr19:43058299-43058423 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 97
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 42, 0

Conread position: 1-125
Cow position: chr19:10171765-10171890 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 98
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 105, 0

Conread position: 1-125
Cow position: chr19:10286672-10286793 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 98
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 65, 0

Conread position: 1-125
Cow position: chr19:17664404-17664531 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 101
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 67, 109

Conread position: 1-125
Cow position: chr19:27104510-27104635 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 103
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 108, 0

Conread position: 1-125
Cow position: chr19:32457406-32457531 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 99
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 66, 99

Conread position: 1-125
Cow position: chr19:33882396-33882273 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 96
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 107, 0

Conread position: 1-125
Cow position: chr19:36059696-36059822 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 101
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 62, 99

Conread position: 1-125
Cow position: chr19:38842791-38842666 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 98
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 108, 0

Conread position: 1-125
Cow position: chr19:47118735-47118608 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 105
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 66, 113

Conread position: 1-129
Cow position: chr19:21335852-21335721 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 104
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 59, 111

Conread position: 1-133
Cow position: chr19:33823081-33823212 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 100
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 106, 0

Conread position: 1-137
Cow position: chr19:39751245-39751384 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 110
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 59, 111

Conread position: 2-125
Cow position: chr19:42240526-42240404 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 95
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 106, 0

Conread position: 3-125
Cow position: chr19:48722791-48722917 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 100
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 57, 0

Conread position: 5-117
Cow position: chr19:3858315-3858199 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 95
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 55, 0

Conread position: 11-126
Cow position: chr19:14573147-14573265 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 94
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 47, 0

Conread position: 1-107
Cow position: chr2:26318407-26318513 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 86
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 1-112
Cow position: chr2:70895806-70895917 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 88
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 1-119
Cow position: chr2:7193978-7194095 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 95
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 107, 0

Conread position: 1-121
Cow position: chr2:43123095-43123216 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 97
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 11, 0

Conread position: 1-122
Cow position: chr2:49608363-49608486 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 98
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 108, 0

Conread position: 1-123
Cow position: chr2:34695017-34695138 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 96
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 107, 0

Conread position: 1-123
Cow position: chr2:62685412-62685533 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 95
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 107, 0

Conread position: 1-124
Cow position: chr2:20900692-20900564 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 101
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 55, 0

Conread position: 1-124
Cow position: chr2:50580144-50580271 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 99
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 62, 0

Conread position: 1-124
Cow position: chr2:51824703-51824822 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 98
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 78, 0

Conread position: 1-124
Cow position: chr2:55632551-55632676 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 101
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 54, 105

Conread position: 1-124
Cow position: chr2:56351141-56351017 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 96
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 105, 0

Conread position: 1-124
Cow position: chr2:81388466-81388590 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 101
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 69, 109

Conread position: 1-125
Cow position: chr2:21962-21836 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 101
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 17, 55

Conread position: 1-125
Cow position: chr2:840935-841064 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 103
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 59, 0

Conread position: 1-125
Cow position: chr2:1303725-1303849 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 100
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 36, 81

Conread position: 1-125
Cow position: chr2:5297515-5297642 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 101
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 59, 109

Conread position: 1-125
Cow position: chr2:8505593-8505723 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 102
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 59, 0

Conread position: 1-125
Cow position: chr2:13354451-13354575 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 95
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 1-125
Cow position: chr2:13543801-13543924 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 100
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 108, 40

Conread position: 1-125
Cow position: chr2:14826061-14826190 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 103
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 67, 0

Conread position: 1-125
Cow position: chr2:15249959-15250080 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 101
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 65, 0

Conread position: 1-125
Cow position: chr2:17114960-17114833 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 102
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 53, 110

Conread position: 1-125
Cow position: chr2:17940512-17940387 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 102
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 62, 21

Conread position: 1-125
Cow position: chr2:17967257-17967130 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 101
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 66, 111

Conread position: 1-125
Cow position: chr2:20940215-20940340 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 97
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 56, 0

Conread position: 1-125
Cow position: chr2:22372171-22372047 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 95
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 1-125
Cow position: chr2:28637507-28637379 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 102
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 62, 0

Conread position: 1-125
Cow position: chr2:30642894-30642769 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 96
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 81, 0

Conread position: 1-125
Cow position: chr2:31499777-31499903 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 104
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 60, 0

Conread position: 1-125
Cow position: chr2:31750193-31750067 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 97
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 103, 0

Conread position: 1-125
Cow position: chr2:35092913-35092792 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 100
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 82, 0

Conread position: 1-125
Cow position: chr2:39584226-39584353 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 102
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 56, 109

Conread position: 1-125
Cow position: chr2:39663171-39663300 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 101
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 55, 0

Conread position: 1-125
Cow position: chr2:41954652-41954783 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 103
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 66, 0

Conread position: 1-125
Cow position: chr2:44065367-44065490 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 99
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 62, 0

Conread position: 1-125
Cow position: chr2:44229914-44229788 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 101
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 66, 0

Conread position: 1-125
Cow position: chr2:45665807-45665930 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 96
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 107, 0

Conread position: 1-125
Cow position: chr2:46227242-46227365 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 97
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 107, 0

Conread position: 1-125
Cow position: chr2:46294261-46294139 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 97
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 107, 0

Conread position: 1-125
Cow position: chr2:46909662-46909535 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 101
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 59, 111

Conread position: 1-125
Cow position: chr2:46994979-46994856 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 99
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 107, 0

Conread position: 1-125
Cow position: chr2:50277796-50277925 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 101
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 59, 0

Conread position: 1-125
Cow position: chr2:50565702-50565827 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 97
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 109, 0

Conread position: 1-125
Cow position: chr2:53430502-53430627 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 98
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 102, 0

Conread position: 1-125
Cow position: chr2:55480462-55480338 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 100
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 1-125
Cow position: chr2:56102694-56102565 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 106
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 66, 0

Conread position: 1-125
Cow position: chr2:59397283-59397156 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 101
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 66, 0

Conread position: 1-125
Cow position: chr2:66097914-66097786 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 102
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 57, 112

Conread position: 1-125
Cow position: chr2:66615143-66615013 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 102
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 57, 0

Conread position: 1-125
Cow position: chr2:68084290-68084417 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 99
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 60, 0

Conread position: 1-125
Cow position: chr2:68109967-68109844 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 100
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 107, 0

Conread position: 1-125
Cow position: chr2:70746573-70746697 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 100
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 17, 34

Conread position: 1-125
Cow position: chr2:74249449-74249324 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 96
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 89, 0

Conread position: 1-125
Cow position: chr2:78750314-78750440 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 103
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 112, 0

Conread position: 1-125
Cow position: chr2:79403876-79404001 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 97
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 108, 0

Conread position: 1-125
Cow position: chr2:80177987-80177862 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 97
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 109, 0

Conread position: 1-125
Cow position: chr2:80839354-80839232 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 97
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 17, 0

Conread position: 1-125
Cow position: chr2:80963869-80963747 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 105
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 59, 0

Conread position: 1-125
Cow position: chr2:82262603-82262478 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 102
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 115, 0

Conread position: 1-127
Cow position: chr2:46244250-46244118 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 106
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 57, 0

Conread position: 1-127
Cow position: chr2:48361343-48361472 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 102
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 53, 111

Conread position: 1-128
Cow position: chr2:25282883-25283014 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 106
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 71, 129

Conread position: 1-128
Cow position: chr2:30816732-30816864 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 109
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 59, 27

Conread position: 1-128
Cow position: chr2:85246555-85246427 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 102
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 108, 0

Conread position: 1-132
Cow position: chr2:37120959-37121095 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 105
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 59, 0

Conread position: 1-134
Cow position: chr2:21698770-21698908 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 108
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 57, 131

Conread position: 1-138
Cow position: chr2:21223893-21224031 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 103
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 128, 0

Conread position: 1-142
Cow position: chr2:56846528-56846672 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 110
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 60, 0

Conread position: 2-114
Cow position: chr2:47008566-47008454 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 89
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 3-125
Cow position: chr2:13582361-13582481 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 97
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 25, 0

Conread position: 3-125
Cow position: chr2:23848043-23847926 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 97
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 57, 0

Conread position: 3-125
Cow position: chr2:39815509-39815384 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 99
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 57, 109

Conread position: 3-125
Cow position: chr2:43994712-43994837 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 100
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 57, 109

Conread position: 5-125
Cow position: chr2:1755814-1755934 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 95
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 70, 103

Conread position: 10-125
Cow position: chr2:69823372-69823487 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 95
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 54, 18

Conread position: 11-132
Cow position: chr2:2333-2212 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 93
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 12-125
Cow position: chr2:39513813-39513923 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 92
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 16, 0

Conread position: 20-136
Cow position: chr2:25056745-25056862 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 94
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 93, 107

Conread position: 27-125
Cow position: chr2:14854117-14854214 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 84
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 81, 0

Conread position: 1-114
Cow position: chr20:17251526-17251640 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 95
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 67, 40

Conread position: 1-121
Cow position: chr20:26469247-26469126 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 94
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 82, 0

Conread position: 1-122
Cow position: chr20:8020712-8020836 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 100
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 66, 111

Conread position: 1-122
Cow position: chr20:12839873-12839996 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 99
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 59, 0

Conread position: 1-122
Cow position: chr20:20203034-20203154 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 94
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 107, 0

Conread position: 1-123
Cow position: chr20:15761130-15761007 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 99
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 66, 109

Conread position: 1-124
Cow position: chr20:24521569-24521692 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 99
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 1-124
Cow position: chr20:28067608-28067486 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 98
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 107, 0

Conread position: 1-125
Cow position: chr20:3781608-3781485 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 97
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 107, 0

Conread position: 1-125
Cow position: chr20:7442305-7442186 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 100
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 65, 0

Conread position: 1-125
Cow position: chr20:7550059-7550182 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 95
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 117, 0

Conread position: 1-125
Cow position: chr20:9379227-9379351 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 97
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 1-125
Cow position: chr20:12996190-12996069 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 97
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 86, 0

Conread position: 1-125
Cow position: chr20:13023660-13023533 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 100
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 108, 0

Conread position: 1-125
Cow position: chr20:13967440-13967318 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 99
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 65, 0

Conread position: 1-125
Cow position: chr20:13994627-13994755 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 104
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 57, 0

Conread position: 1-125
Cow position: chr20:15582218-15582092 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 97
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 112, 0

Conread position: 1-125
Cow position: chr20:22235133-22235256 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 102
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 107, 0

Conread position: 1-125
Cow position: chr20:22959524-22959400 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 98
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 1-125
Cow position: chr20:27339884-27340006 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 99
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 49, 0

Conread position: 1-125
Cow position: chr20:32847171-32847297 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 99
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 62, 110

Conread position: 1-125
Cow position: chr20:33144737-33144611 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 99
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 107, 0

Conread position: 1-125
Cow position: chr20:33435351-33435225 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 99
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 22, 81

Conread position: 1-125
Cow position: chr20:34098140-34098017 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 101
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 107, 0

Conread position: 1-125
Cow position: chr20:37165544-37165667 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 96
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 107, 0

Conread position: 1-125
Cow position: chr20:40423272-40423148 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 96
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 1-125
Cow position: chr20:42469583-42469703 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 101
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 16, 0

Conread position: 1-127
Cow position: chr20:15593114-15593239 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 96
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 103, 0

Conread position: 1-128
Cow position: chr20:33532129-33532251 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 100
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 38, 0

Conread position: 1-128
Cow position: chr20:35958463-35958589 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 101
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 124, 0

Conread position: 1-129
Cow position: chr20:8556456-8556325 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 104
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 59, 111

Conread position: 1-134
Cow position: chr20:35897336-35897467 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 102
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 107, 0

Conread position: 1-135
Cow position: chr20:32578101-32577970 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 103
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 35, 0

Conread position: 1-145
Cow position: chr20:14718923-14718780 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 105
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 107, 0

Conread position: 2-124
Cow position: chr20:3599571-3599450 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 94
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 106, 0

Conread position: 2-125
Cow position: chr20:4781381-4781507 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 100
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 63, 110

Conread position: 2-125
Cow position: chr20:19236897-19237020 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 94
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 2-125
Cow position: chr20:35797424-35797550 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 101
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 54, 101

Conread position: 3-124
Cow position: chr20:38768633-38768516 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 96
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 69, 0

Conread position: 3-125
Cow position: chr20:8910744-8910863 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 98
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 114, 61

Conread position: 3-125
Cow position: chr20:39728268-39728390 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 95
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 1-105
Cow position: chr21:34738437-34738542 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 86
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 60, 0

Conread position: 1-114
Cow position: chr21:4399638-4399749 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 91
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 66, 0

Conread position: 1-115
Cow position: chr21:18713122-18713236 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 90
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 1-117
Cow position: chr21:33791529-33791414 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 91
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 63, 0

Conread position: 1-119
Cow position: chr21:18065085-18064965 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 94
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 108, 0

Conread position: 1-119
Cow position: chr21:30592465-30592346 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 95
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 112, 0

Conread position: 1-123
Cow position: chr21:912128-912007 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 94
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 107, 0

Conread position: 1-123
Cow position: chr21:5153456-5153578 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 98
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 1-123
Cow position: chr21:12366226-12366350 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 97
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 112, 0

Conread position: 1-123
Cow position: chr21:49700197-49700074 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 95
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 112, 0

Conread position: 1-124
Cow position: chr21:393860-393986 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 100
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 59, 111

Conread position: 1-124
Cow position: chr21:9416081-9416209 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 102
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 57, 0

Conread position: 1-124
Cow position: chr21:15911239-15911360 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 98
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 61, 0

Conread position: 1-124
Cow position: chr21:17282542-17282666 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 102
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 115, 0

Conread position: 1-124
Cow position: chr21:33210037-33210163 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 104
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 59, 111

Conread position: 1-124
Cow position: chr21:42913907-42913784 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 101
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 62, 116

Conread position: 1-125
Cow position: chr21:3813644-3813518 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 101
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 113, 0

Conread position: 1-125
Cow position: chr21:18790717-18790597 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 100
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 58, 0

Conread position: 1-125
Cow position: chr21:20925668-20925544 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 97
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 1-125
Cow position: chr21:23586715-23586842 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 102
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 59, 111

Conread position: 1-125
Cow position: chr21:27863681-27863553 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 102
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 59, 0

Conread position: 1-125
Cow position: chr21:29484822-29484941 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 99
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 66, 0

Conread position: 1-125
Cow position: chr21:29979917-29979794 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 100
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 112, 66

Conread position: 1-125
Cow position: chr21:30990430-30990308 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 99
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 54, 0

Conread position: 1-125
Cow position: chr21:32535815-32535937 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 100
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 93, 0

Conread position: 1-125
Cow position: chr21:33350581-33350708 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 100
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 58, 111

Conread position: 1-125
Cow position: chr21:33562854-33562976 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 98
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 22, 0

Conread position: 1-125
Cow position: chr21:34391132-34391013 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 101
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 57, 0

Conread position: 1-125
Cow position: chr21:35897321-35897444 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 96
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 107, 0

Conread position: 1-125
Cow position: chr21:38900613-38900740 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 101
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 69, 111

Conread position: 1-125
Cow position: chr21:39401433-39401556 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 100
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 107, 0

Conread position: 1-125
Cow position: chr21:43357422-43357296 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 106
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 67, 15

Conread position: 1-125
Cow position: chr21:47802421-47802295 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 101
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 92, 110

Conread position: 1-127
Cow position: chr21:8985388-8985511 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 100
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 85, 0

Conread position: 2-125
Cow position: chr21:6051346-6051469 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 96
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 69, 107

Conread position: 3-114
Cow position: chr21:5137649-5137538 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 90
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 3-125
Cow position: chr21:43631362-43631237 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 100
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 64, 108

Conread position: 5-125
Cow position: chr21:39450326-39450201 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 99
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 62, 0

Conread position: 11-125
Cow position: chr21:24642367-24642482 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 93
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 12, 45

Conread position: 11-125
Cow position: chr21:32237146-32237257 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 94
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 75, 0

Conread position: 24-125
Cow position: chr21:12462109-12462008 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 85
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 31, 85

Conread position: 1-104
Cow position: chr22:10609101-10609204 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 88
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 1-112
Cow position: chr22:25246681-25246792 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 88
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 1-114
Cow position: chr22:12777811-12777697 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 90
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 61, 0

Conread position: 1-123
Cow position: chr22:10685316-10685195 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 94
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 107, 0

Conread position: 1-123
Cow position: chr22:15398806-15398685 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 94
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 107, 0

Conread position: 1-124
Cow position: chr22:2502609-2502730 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 97
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 66, 0

Conread position: 1-124
Cow position: chr22:6610582-6610452 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 105
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 40, 0

Conread position: 1-124
Cow position: chr22:19376482-19376602 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 100
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 61, 40

Conread position: 1-124
Cow position: chr22:43292129-43292002 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 100
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 59, 0

Conread position: 1-125
Cow position: chr22:534265-534394 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 102
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 59, 0

Conread position: 1-125
Cow position: chr22:644989-644868 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 97
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 79, 0

Conread position: 1-125
Cow position: chr22:2141586-2141710 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 95
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 1-125
Cow position: chr22:10585929-10585807 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 97
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 108, 0

Conread position: 1-125
Cow position: chr22:11987445-11987319 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 103
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 59, 84

Conread position: 1-125
Cow position: chr22:12968298-12968174 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 99
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 108, 54

Conread position: 1-125
Cow position: chr22:13720753-13720628 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 100
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 27, 23

Conread position: 1-125
Cow position: chr22:15090512-15090636 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 99
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 1-125
Cow position: chr22:20626613-20626736 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 100
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 107, 0

Conread position: 1-125
Cow position: chr22:23403869-23403751 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 100
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 61, 0

Conread position: 1-125
Cow position: chr22:26106830-26106953 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 101
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 106, 0

Conread position: 1-125
Cow position: chr22:26658827-26658950 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 104
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 107, 0

Conread position: 1-125
Cow position: chr22:28146456-28146582 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 98
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 112, 0

Conread position: 1-125
Cow position: chr22:29013649-29013775 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 100
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 108, 0

Conread position: 1-125
Cow position: chr22:30094018-30094140 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 96
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 16, 0

Conread position: 1-125
Cow position: chr22:30472818-30472941 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 96
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 73, 0

Conread position: 1-125
Cow position: chr22:30698951-30699074 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 96
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 107, 0

Conread position: 1-125
Cow position: chr22:34398683-34398562 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 99
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 61, 0

Conread position: 1-125
Cow position: chr22:38313692-38313567 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 98
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 112, 73

Conread position: 1-125
Cow position: chr22:38940177-38940053 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 97
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 1-125
Cow position: chr22:40121106-40120980 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 100
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 108, 0

Conread position: 1-125
Cow position: chr22:45106146-45106019 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 101
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 111, 0

Conread position: 1-128
Cow position: chr22:21012162-21012288 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 98
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 107, 0

Conread position: 1-128
Cow position: chr22:25743180-25743053 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 99
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 71, 107

Conread position: 1-128
Cow position: chr22:43812646-43812521 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 99
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 49, 0

Conread position: 1-129
Cow position: chr22:15730633-15730760 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 101
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 107, 0

Conread position: 1-158
Cow position: chr22:22013492-22013648 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 114
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 126, 56

Conread position: 2-122
Cow position: chr22:28120564-28120688 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 101
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 54, 0

Conread position: 6-125
Cow position: chr22:12381676-12381797 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 95
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 102, 0

Conread position: 7-180
Cow position: chr22:9520924-9521100 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 130
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 139, 101

Conread position: 11-125
Cow position: chr22:14844352-14844471 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 99
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 48, 0

Conread position: 1-123
Cow position: chr23:344401-344276 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 100
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 66, 111

Conread position: 1-123
Cow position: chr23:5617353-5617476 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 95
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 109, 0

Conread position: 1-124
Cow position: chr23:15287357-15287230 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 100
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 66, 0

Conread position: 1-124
Cow position: chr23:20057090-20056967 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 100
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 66, 82

Conread position: 1-125
Cow position: chr23:1803567-1803693 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 99
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 57, 122

Conread position: 1-125
Cow position: chr23:1924059-1923936 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 98
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 107, 0

Conread position: 1-125
Cow position: chr23:3247365-3247485 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 98
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 54, 0

Conread position: 1-125
Cow position: chr23:5706777-5706900 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 99
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 115, 0

Conread position: 1-125
Cow position: chr23:7175397-7175523 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 98
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 112, 0

Conread position: 1-125
Cow position: chr23:9734191-9734315 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 94
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 1-125
Cow position: chr23:10554235-10554108 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 100
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 62, 113

Conread position: 1-125
Cow position: chr23:11080858-11080980 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 98
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 54, 0

Conread position: 1-125
Cow position: chr23:11129011-11129138 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 99
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 100, 0

Conread position: 1-125
Cow position: chr23:12896824-12896698 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 97
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 112, 0

Conread position: 1-125
Cow position: chr23:25189118-25189245 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 101
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 105, 27

Conread position: 1-125
Cow position: chr23:26632576-26632703 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 105
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 62, 111

Conread position: 1-125
Cow position: chr23:27563932-27563807 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 104
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 109, 0

Conread position: 1-125
Cow position: chr23:28053054-28053177 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 95
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 78, 0

Conread position: 1-125
Cow position: chr23:33601747-33601627 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 100
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 64, 0

Conread position: 1-125
Cow position: chr23:37065614-37065743 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 103
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 58, 0

Conread position: 1-125
Cow position: chr23:39309338-39309214 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 98
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 1-127
Cow position: chr23:1885399-1885269 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 103
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 59, 0

Conread position: 1-128
Cow position: chr23:18367472-18367601 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 100
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 108, 0

Conread position: 1-128
Cow position: chr23:22804500-22804628 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 98
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 75, 0

Conread position: 1-131
Cow position: chr23:15056865-15056736 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 98
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 107, 0

Conread position: 1-181
Cow position: chr23:19979170-19978983 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 135
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 55, 177

Conread position: 2-123
Cow position: chr23:4579257-4579137 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 97
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 39, 79

Conread position: 2-123
Cow position: chr23:25378433-25378553 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 98
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 29, 0

Conread position: 2-125
Cow position: chr23:3208841-3208719 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 97
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 106, 0

Conread position: 3-114
Cow position: chr23:27862110-27862220 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 92
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 104, 0

Conread position: 3-125
Cow position: chr23:1878092-1877971 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 96
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 105, 0

Conread position: 3-125
Cow position: chr23:24704058-24704182 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 96
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 55, 0

Conread position: 3-125
Cow position: chr23:40778041-40778167 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 99
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 57, 0

Conread position: 9-125
Cow position: chr23:18296592-18296709 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 92
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 100, 0

Conread position: 10-125
Cow position: chr23:4523193-4523075 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 93
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 65, 0

Conread position: 11-123
Cow position: chr23:5723330-5723443 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 90
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 88, 0

Conread position: 1-115
Cow position: chr24:20024358-20024476 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 94
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 59, 0

Conread position: 1-122
Cow position: chr24:19804438-19804562 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 99
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 59, 110

Conread position: 1-123
Cow position: chr24:15246884-15246762 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 96
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 87, 108

Conread position: 1-124
Cow position: chr24:11886908-11887034 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 102
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 59, 111

Conread position: 1-124
Cow position: chr24:16625750-16625627 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 95
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 1-125
Cow position: chr24:814514-814391 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 98
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 107, 0

Conread position: 1-125
Cow position: chr24:2730819-2730695 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 98
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 1-125
Cow position: chr24:3493644-3493766 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 97
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 10, 0

Conread position: 1-125
Cow position: chr24:6900575-6900701 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 97
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 112, 0

Conread position: 1-125
Cow position: chr24:18390538-18390414 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 94
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 1-125
Cow position: chr24:18734604-18734477 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 101
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 53, 23

Conread position: 1-125
Cow position: chr24:19658299-19658430 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 105
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 40, 0

Conread position: 1-125
Cow position: chr24:27906185-27906313 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 101
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 62, 0

Conread position: 1-125
Cow position: chr24:27967831-27967952 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 97
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 65, 0

Conread position: 1-125
Cow position: chr24:29673270-29673394 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 99
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 1-125
Cow position: chr24:30776917-30776791 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 97
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 69, 0

Conread position: 1-125
Cow position: chr24:33944158-33944278 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 99
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 40, 0

Conread position: 1-125
Cow position: chr24:38375035-38375159 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 100
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 52, 108

Conread position: 1-125
Cow position: chr24:39440806-39440680 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 105
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 112, 0

Conread position: 1-125
Cow position: chr24:43364114-43364234 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 98
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 64, 0

Conread position: 1-127
Cow position: chr24:15666658-15666527 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 104
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 59, 0

Conread position: 1-131
Cow position: chr24:33238797-33238669 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 105
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 118, 0

Conread position: 2-125
Cow position: chr24:27052743-27052620 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 98
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 107, 94

Conread position: 3-123
Cow position: chr24:40055969-40055849 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 97
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 55, 83

Conread position: 3-125
Cow position: chr24:27207442-27207320 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 94
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 3-125
Cow position: chr24:27543723-27543602 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 94
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 105, 0

Conread position: 3-125
Cow position: chr24:30177989-30178109 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 95
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 54, 0

Conread position: 3-128
Cow position: chr24:35073845-35073969 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 98
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 122, 0

Conread position: 4-114
Cow position: chr24:11839932-11840042 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 89
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 5-125
Cow position: chr24:15861846-15861726 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 96
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 1-111
Cow position: chr25:11585291-11585405 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 95
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 59, 0

Conread position: 1-114
Cow position: chr25:21245834-21245721 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 92
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 1-114
Cow position: chr25:30319676-30319563 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 90
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 1-120
Cow position: chr25:26238644-26238762 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 93
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 107, 0

Conread position: 1-124
Cow position: chr25:1735543-1735418 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 103
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 59, 119

Conread position: 1-124
Cow position: chr25:14791525-14791649 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 97
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 57, 109

Conread position: 1-124
Cow position: chr25:36557459-36557585 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 100
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 55, 113

Conread position: 1-125
Cow position: chr25:6424815-6424687 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 99
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 59, 0

Conread position: 1-125
Cow position: chr25:10137871-10137993 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 102
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 108, 0

Conread position: 1-125
Cow position: chr25:10218278-10218151 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 101
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 28, 0

Conread position: 1-125
Cow position: chr25:10365979-10365854 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 100
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 59, 0

Conread position: 1-125
Cow position: chr25:10657251-10657124 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 98
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 60, 0

Conread position: 1-125
Cow position: chr25:12204243-12204366 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 100
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 108, 80

Conread position: 1-125
Cow position: chr25:17658387-17658510 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 102
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 30, 0

Conread position: 1-125
Cow position: chr25:18988149-18988278 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 103
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 59, 0

Conread position: 1-125
Cow position: chr25:21895113-21894990 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 102
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 118, 0

Conread position: 1-125
Cow position: chr25:22203917-22203788 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 103
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 59, 0

Conread position: 1-125
Cow position: chr25:24452396-24452271 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 100
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 34, 10

Conread position: 1-125
Cow position: chr25:26087288-26087417 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 104
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 57, 0

Conread position: 1-125
Cow position: chr25:35625401-35625280 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 98
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 16, 0

Conread position: 1-125
Cow position: chr25:36761879-36762003 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 96
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 1-127
Cow position: chr25:5514779-5514909 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 104
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 57, 0

Conread position: 1-127
Cow position: chr25:33256141-33256267 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 100
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 1-128
Cow position: chr25:9396223-9396350 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 98
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 109, 125

Conread position: 1-128
Cow position: chr25:12778759-12778629 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 103
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 65, 111

Conread position: 1-129
Cow position: chr25:25827235-25827367 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 101
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 59, 0

Conread position: 1-157
Cow position: chr25:10330629-10330469 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 122
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 59, 111

Conread position: 1-180
Cow position: chr25:35344811-35344990 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 130
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 112, 119

Conread position: 3-125
Cow position: chr25:61432-61557 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 100
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 111, 0

Conread position: 20-125
Cow position: chr25:26270142-26270037 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 87
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 1-123
Cow position: chr26:32898079-32897958 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 95
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 107, 0

Conread position: 1-124
Cow position: chr26:11263429-11263556 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 102
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 59, 0

Conread position: 1-124
Cow position: chr26:31605199-31605320 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 96
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 54, 0

Conread position: 1-125
Cow position: chr26:4585418-4585291 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 99
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 69, 0

Conread position: 1-125
Cow position: chr26:7525676-7525553 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 102
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 107, 0

Conread position: 1-125
Cow position: chr26:9099960-9099845 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 101
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 47, 0

Conread position: 1-125
Cow position: chr26:20291890-20291767 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 97
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 106, 0

Conread position: 1-125
Cow position: chr26:22180292-22180422 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 102
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 57, 0

Conread position: 1-125
Cow position: chr26:30034613-30034491 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 98
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 103, 81

Conread position: 1-125
Cow position: chr26:33567251-33567130 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 101
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 108, 81

Conread position: 2-125
Cow position: chr26:23097385-23097262 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 94
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 11-148
Cow position: chr26:3756035-3756169 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 103
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 105, 0

Conread position: 19-125
Cow position: chr26:26670937-26670831 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 85
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 28-125
Cow position: chr26:27761830-27761733 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 81
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 1-114
Cow position: chr27:15866405-15866292 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 89
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 1-123
Cow position: chr27:17472994-17472870 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 96
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 111, 0

Conread position: 1-125
Cow position: chr27:4812695-4812822 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 100
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 66, 111

Conread position: 1-125
Cow position: chr27:10992535-10992411 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 100
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 1-125
Cow position: chr27:11815578-11815704 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 99
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 113, 0

Conread position: 1-125
Cow position: chr27:13638811-13638937 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 99
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 111, 0

Conread position: 1-125
Cow position: chr27:14902467-14902594 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 102
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 57, 99

Conread position: 1-125
Cow position: chr27:20036947-20037068 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 97
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 62, 0

Conread position: 1-125
Cow position: chr27:20592165-20592039 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 100
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 108, 0

Conread position: 1-125
Cow position: chr27:25277318-25277195 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 103
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 115, 63

Conread position: 1-125
Cow position: chr27:26427947-26428075 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 102
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 62, 0

Conread position: 1-125
Cow position: chr27:27141775-27141652 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 95
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 107, 0

Conread position: 1-125
Cow position: chr27:28518467-28518347 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 104
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 65, 0

Conread position: 1-127
Cow position: chr27:18593452-18593323 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 102
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 61, 111

Conread position: 1-128
Cow position: chr27:6523227-6523097 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 101
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 62, 0

Conread position: 1-128
Cow position: chr27:26625306-26625181 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 102
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 85, 0

Conread position: 1-129
Cow position: chr27:18922632-18922506 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 101
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 107, 0

Conread position: 1-132
Cow position: chr27:11255694-11255565 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 102
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 56, 0

Conread position: 1-135
Cow position: chr27:13198098-13197961 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 106
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 69, 110

Conread position: 2-125
Cow position: chr27:17926456-17926574 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 100
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 84, 0

Conread position: 3-114
Cow position: chr27:27640812-27640927 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 92
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 56, 0

Conread position: 4-123
Cow position: chr27:27259787-27259668 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 94
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 5-125
Cow position: chr27:18030879-18031005 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 99
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 53, 0

Conread position: 5-125
Cow position: chr27:27019923-27020045 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 96
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 69, 0

Conread position: 19-123
Cow position: chr27:13254592-13254695 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 86
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 9, 0

Conread position: 1-108
Cow position: chr28:2888210-2888312 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 89
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 54, 0

Conread position: 1-114
Cow position: chr28:2898776-2898889 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 89
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 1-114
Cow position: chr28:23793522-23793409 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 90
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 1-123
Cow position: chr28:5144742-5144615 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 102
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 29, 0

Conread position: 1-123
Cow position: chr28:16253077-16252958 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 95
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 78, 0

Conread position: 1-124
Cow position: chr28:2905361-2905483 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 97
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 107, 0

Conread position: 1-124
Cow position: chr28:5773420-5773543 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 98
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 1-124
Cow position: chr28:9285597-9285471 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 103
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 55, 111

Conread position: 1-124
Cow position: chr28:19222817-19222693 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 96
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 107, 0

Conread position: 1-124
Cow position: chr28:22170937-22170813 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 103
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 108, 0

Conread position: 1-125
Cow position: chr28:2862642-2862769 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 100
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 54, 111

Conread position: 1-125
Cow position: chr28:3144111-3143987 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 101
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 1-125
Cow position: chr28:3914490-3914615 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 98
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 90, 0

Conread position: 1-125
Cow position: chr28:7590401-7590277 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 101
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 1-125
Cow position: chr28:7980638-7980511 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 100
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 58, 110

Conread position: 1-125
Cow position: chr28:8348872-8348746 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 103
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 59, 83

Conread position: 1-125
Cow position: chr28:8372251-8372378 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 102
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 59, 111

Conread position: 1-125
Cow position: chr28:9390584-9390460 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 101
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 75, 110

Conread position: 1-125
Cow position: chr28:12430390-12430511 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 99
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 64, 0

Conread position: 1-125
Cow position: chr28:13267562-13267690 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 105
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 59, 0

Conread position: 1-125
Cow position: chr28:14649129-14649252 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 95
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 107, 0

Conread position: 1-125
Cow position: chr28:16085105-16085228 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 100
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 57, 0

Conread position: 1-125
Cow position: chr28:20313056-20313179 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 99
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 108, 27

Conread position: 1-125
Cow position: chr28:21502175-21502299 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 98
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 107, 119

Conread position: 1-125
Cow position: chr28:25727158-25727282 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 94
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 1-125
Cow position: chr28:26784686-26784561 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 97
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 112, 0

Conread position: 1-127
Cow position: chr28:3493004-3492879 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 99
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 31, 58

Conread position: 1-128
Cow position: chr28:15272480-15272352 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 103
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 112, 126

Conread position: 1-134
Cow position: chr28:23621328-23621460 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 103
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 107, 0

Conread position: 1-135
Cow position: chr28:15688821-15688957 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 104
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 113, 79

Conread position: 1-164
Cow position: chr28:33036685-33036522 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 119
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 141, 53

Conread position: 1-166
Cow position: chr28:8628996-8628833 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 122
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 112, 125

Conread position: 2-124
Cow position: chr28:2738030-2737905 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 102
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 58, 110

Conread position: 2-125
Cow position: chr28:22321203-22321330 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 98
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 61, 0

Conread position: 3-128
Cow position: chr28:32813216-32813088 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 101
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 110, 25

Conread position: 4-125
Cow position: chr28:16386722-16386604 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 98
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 111, 55

Conread position: 1-107
Cow position: chr29:686418-686312 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 91
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 1-110
Cow position: chr29:45588699-45588590 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 91
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 1-124
Cow position: chr29:21236890-21237013 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 100
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 62, 49

Conread position: 1-124
Cow position: chr29:28195743-28195617 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 100
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 59, 84

Conread position: 1-125
Cow position: chr29:87247-87119 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 102
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 59, 11

Conread position: 1-125
Cow position: chr29:2744498-2744375 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 95
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 107, 0

Conread position: 1-125
Cow position: chr29:2984658-2984785 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 102
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 109, 0

Conread position: 1-125
Cow position: chr29:4520109-4520232 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 103
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 107, 0

Conread position: 1-125
Cow position: chr29:12784181-12784059 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 96
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 73, 0

Conread position: 1-125
Cow position: chr29:25088527-25088650 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 96
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 107, 0

Conread position: 1-125
Cow position: chr29:35501875-35501754 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 101
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 65, 0

Conread position: 1-125
Cow position: chr29:36216891-36217014 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 95
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 107, 0

Conread position: 1-125
Cow position: chr29:39642950-39643074 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 99
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 116, 58

Conread position: 1-125
Cow position: chr29:40891928-40891799 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 100
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 58, 0

Conread position: 1-125
Cow position: chr29:40902946-40902823 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 97
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 107, 0

Conread position: 1-139
Cow position: chr29:29066200-29066337 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 104
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 107, 0

Conread position: 2-111
Cow position: chr29:31928754-31928865 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 92
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 39, 16

Conread position: 2-124
Cow position: chr29:16195627-16195746 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 98
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 65, 0

Conread position: 2-125
Cow position: chr29:35738495-35738368 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 101
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 58, 124

Conread position: 2-132
Cow position: chr29:3711161-3711288 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 100
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 79, 0

Conread position: 3-128
Cow position: chr29:356102-356224 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 98
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 82, 0

Conread position: 4-125
Cow position: chr29:13458835-13458956 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 96
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 12-125
Cow position: chr29:45650559-45650446 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 89
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 26-124
Cow position: chr29:11433921-11434019 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 82
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 1-107
Cow position: chr3:20802878-20802772 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 87
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 1-113
Cow position: chr3:60892384-60892496 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 90
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 1-114
Cow position: chr3:19198433-19198546 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 89
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 1-114
Cow position: chr3:22872300-22872187 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 91
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 1-114
Cow position: chr3:41367232-41367119 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 93
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 1-114
Cow position: chr3:70401654-70401767 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 95
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 1-116
Cow position: chr3:79884735-79884620 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 90
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 1-121
Cow position: chr3:48900750-48900630 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 96
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 52, 27

Conread position: 1-122
Cow position: chr3:14601962-14601840 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 98
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 47, 56

Conread position: 1-122
Cow position: chr3:30463414-30463294 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 97
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 117, 0

Conread position: 1-122
Cow position: chr3:55124526-55124405 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 93
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 1-123
Cow position: chr3:17451182-17451057 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 101
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 54, 111

Conread position: 1-123
Cow position: chr3:22716528-22716407 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 95
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 107, 0

Conread position: 1-123
Cow position: chr3:48530389-48530511 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 97
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 1-123
Cow position: chr3:58383720-58383841 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 100
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 107, 0

Conread position: 1-123
Cow position: chr3:65800344-65800468 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 99
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 17, 110

Conread position: 1-124
Cow position: chr3:52652322-52652201 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 103
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 74, 0

Conread position: 1-124
Cow position: chr3:56476434-56476554 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 97
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 66, 0

Conread position: 1-124
Cow position: chr3:68583251-68583128 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 94
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 1-124
Cow position: chr3:73443335-73443213 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 95
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 106, 0

Conread position: 1-124
Cow position: chr3:74233947-74234070 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 100
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 48, 56

Conread position: 1-125
Cow position: chr3:2506729-2506601 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 103
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 67, 0

Conread position: 1-125
Cow position: chr3:2674781-2674903 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 101
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 92, 0

Conread position: 1-125
Cow position: chr3:3164744-3164620 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 95
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 1-125
Cow position: chr3:5096956-5097081 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 98
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 104, 68

Conread position: 1-125
Cow position: chr3:7678423-7678543 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 100
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 59, 0

Conread position: 1-125
Cow position: chr3:13577434-13577312 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 97
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 108, 0

Conread position: 1-125
Cow position: chr3:14552630-14552753 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 99
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 105, 0

Conread position: 1-125
Cow position: chr3:18066886-18067010 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 100
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 60, 108

Conread position: 1-125
Cow position: chr3:18393632-18393513 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 98
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 63, 0

Conread position: 1-125
Cow position: chr3:18854845-18854970 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 99
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 112, 54

Conread position: 1-125
Cow position: chr3:23471716-23471588 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 104
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 60, 0

Conread position: 1-125
Cow position: chr3:47284589-47284714 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 100
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 109, 78

Conread position: 1-125
Cow position: chr3:49650131-49650261 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 104
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 52, 0

Conread position: 1-125
Cow position: chr3:52607935-52608062 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 100
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 66, 111

Conread position: 1-125
Cow position: chr3:52863432-52863309 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 100
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 71, 6

Conread position: 1-125
Cow position: chr3:53112921-53113048 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 101
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 59, 110

Conread position: 1-125
Cow position: chr3:53384531-53384408 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 98
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 57, 0

Conread position: 1-125
Cow position: chr3:59392358-59392228 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 102
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 57, 0

Conread position: 1-125
Cow position: chr3:60933167-60933294 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 99
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 69, 0

Conread position: 1-125
Cow position: chr3:61262555-61262678 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 97
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 107, 0

Conread position: 1-125
Cow position: chr3:70565986-70565863 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 97
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 118, 0

Conread position: 1-125
Cow position: chr3:72675839-72675967 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 104
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 66, 112

Conread position: 1-125
Cow position: chr3:73708801-73708923 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 100
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 27, 0

Conread position: 1-125
Cow position: chr3:79208251-79208121 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 103
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 59, 0

Conread position: 1-125
Cow position: chr3:79292586-79292705 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 99
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 85, 0

Conread position: 1-125
Cow position: chr3:83920950-83921078 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 104
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 67, 0

Conread position: 1-125
Cow position: chr3:84000364-84000488 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 98
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 1-128
Cow position: chr3:17222392-17222266 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 101
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 44, 55

Conread position: 1-128
Cow position: chr3:25691501-25691631 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 102
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 55, 90

Conread position: 1-128
Cow position: chr3:51012781-51012654 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 98
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 2-121
Cow position: chr3:4031721-4031841 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 97
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 64, 108

Conread position: 2-125
Cow position: chr3:29812996-29813119 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 100
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 65, 81

Conread position: 2-125
Cow position: chr3:53046904-53046782 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 103
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 104, 80

Conread position: 3-125
Cow position: chr3:42483654-42483776 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 96
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 3-125
Cow position: chr3:51578567-51578446 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 98
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 67, 107

Conread position: 3-125
Cow position: chr3:71237911-71238031 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 96
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 25, 0

Conread position: 5-125
Cow position: chr3:73764440-73764320 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 97
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 11-125
Cow position: chr3:4861451-4861564 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 91
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 97, 0

Conread position: 11-141
Cow position: chr3:43528475-43528344 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 101
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 111, 0

Conread position: 12-125
Cow position: chr3:29334751-29334636 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 92
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 58, 0

Conread position: 16-135
Cow position: chr3:27940361-27940244 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 98
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 92, 0

Conread position: 1-111
Cow position: chr4:27997453-27997565 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 92
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 56, 40

Conread position: 1-118
Cow position: chr4:38945813-38945933 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 96
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 107, 0

Conread position: 1-119
Cow position: chr4:39231755-39231630 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 100
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 94, 0

Conread position: 1-121
Cow position: chr4:33612595-33612472 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 99
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 59, 111

Conread position: 1-123
Cow position: chr4:22051701-22051580 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 98
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 109, 28

Conread position: 1-123
Cow position: chr4:41867212-41867333 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 98
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 107, 0

Conread position: 1-124
Cow position: chr4:1915810-1915688 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 95
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 107, 0

Conread position: 1-124
Cow position: chr4:5461092-5460970 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 100
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 113, 59

Conread position: 1-124
Cow position: chr4:7571177-7571299 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 97
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 48, 109

Conread position: 1-124
Cow position: chr4:11901795-11901671 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 97
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 112, 0

Conread position: 1-124
Cow position: chr4:12260013-12259890 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 99
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 1-124
Cow position: chr4:23647075-23646952 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 98
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 1-125
Cow position: chr4:10412146-10412268 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 97
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 108, 0

Conread position: 1-125
Cow position: chr4:10731986-10732114 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 101
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 65, 0

Conread position: 1-125
Cow position: chr4:11090919-11090801 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 99
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 66, 0

Conread position: 1-125
Cow position: chr4:14414578-14414451 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 98
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 83, 0

Conread position: 1-125
Cow position: chr4:16637831-16637708 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 100
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 112, 93

Conread position: 1-125
Cow position: chr4:19322311-19322191 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 100
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 58, 0

Conread position: 1-125
Cow position: chr4:20299038-20299164 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 102
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 59, 105

Conread position: 1-125
Cow position: chr4:22138468-22138340 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 103
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 59, 0

Conread position: 1-125
Cow position: chr4:23445284-23445158 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 103
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 108, 19

Conread position: 1-125
Cow position: chr4:24119141-24119017 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 97
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 1-125
Cow position: chr4:25879164-25879289 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 103
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 105, 16

Conread position: 1-125
Cow position: chr4:27540389-27540512 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 96
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 107, 0

Conread position: 1-125
Cow position: chr4:30974104-30974231 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 100
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 55, 109

Conread position: 1-125
Cow position: chr4:34310687-34310559 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 105
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 59, 0

Conread position: 1-125
Cow position: chr4:39128298-39128425 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 100
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 16, 0

Conread position: 1-125
Cow position: chr4:41908024-41907901 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 100
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 107, 0

Conread position: 1-125
Cow position: chr4:46370578-46370706 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 102
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 67, 0

Conread position: 1-125
Cow position: chr4:52748690-52748567 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 97
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 107, 0

Conread position: 1-125
Cow position: chr4:53209003-53209130 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 102
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 67, 0

Conread position: 1-125
Cow position: chr4:53999739-53999618 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 98
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 85, 0

Conread position: 1-125
Cow position: chr4:54501681-54501558 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 96
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 106, 0

Conread position: 1-125
Cow position: chr4:56233455-56233578 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 100
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 107, 0

Conread position: 1-125
Cow position: chr4:56409949-56410079 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 102
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 59, 0

Conread position: 1-125
Cow position: chr4:56514171-56514045 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 102
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 57, 105

Conread position: 1-125
Cow position: chr4:59008602-59008478 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 101
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 1-126
Cow position: chr4:53832813-53832940 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 102
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 67, 41

Conread position: 1-126
Cow position: chr4:55508648-55508522 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 98
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 108, 0

Conread position: 1-127
Cow position: chr4:40410352-40410228 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 100
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 83, 0

Conread position: 1-127
Cow position: chr4:46274961-46275085 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 101
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 116, 81

Conread position: 1-128
Cow position: chr4:2141513-2141638 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 102
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 106, 0

Conread position: 1-128
Cow position: chr4:37620120-37619994 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 105
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 124, 0

Conread position: 1-128
Cow position: chr4:38999194-38999318 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 104
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 93, 0

Conread position: 1-128
Cow position: chr4:41292212-41292083 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 104
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 59, 111

Conread position: 1-128
Cow position: chr4:46591427-46591559 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 103
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 61, 0

Conread position: 1-131
Cow position: chr4:23060235-23060099 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 106
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 59, 0

Conread position: 1-134
Cow position: chr4:53763350-53763218 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 102
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 107, 0

Conread position: 1-168
Cow position: chr4:30690492-30690656 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 123
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 128, 65

Conread position: 1-170
Cow position: chr4:46385810-46385636 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 126
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 66, 0

Conread position: 2-124
Cow position: chr4:2536601-2536721 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 97
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 33, 0

Conread position: 2-125
Cow position: chr4:44612771-44612895 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 98
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 115, 0

Conread position: 3-125
Cow position: chr4:14743029-14743153 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 97
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 110, 0

Conread position: 3-125
Cow position: chr4:21058616-21058488 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 102
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 65, 0

Conread position: 3-125
Cow position: chr4:41602618-41602740 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 96
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 79, 106

Conread position: 3-135
Cow position: chr4:61999684-61999556 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 102
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 103, 0

Conread position: 5-124
Cow position: chr4:11099897-11099779 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 93
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 103, 0

Conread position: 5-125
Cow position: chr4:25359380-25359501 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 94
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 104, 0

Conread position: 11-125
Cow position: chr4:27687701-27687815 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 92
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 1-114
Cow position: chr5:1247077-1247190 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 89
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 1-114
Cow position: chr5:26541094-26541206 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 92
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 68, 0

Conread position: 1-118
Cow position: chr5:9390336-9390457 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 96
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 62, 0

Conread position: 1-122
Cow position: chr5:45036822-45036943 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 97
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 1-123
Cow position: chr5:4551932-4552058 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 99
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 66, 0

Conread position: 1-123
Cow position: chr5:35969343-35969464 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 96
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 106, 0

Conread position: 1-124
Cow position: chr5:16184890-16185010 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 98
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 59, 0

Conread position: 1-124
Cow position: chr5:26133273-26133148 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 99
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 113, 0

Conread position: 1-124
Cow position: chr5:27419920-27419799 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 97
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 73, 0

Conread position: 1-124
Cow position: chr5:34638686-34638807 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 100
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 66, 0

Conread position: 1-124
Cow position: chr5:43474648-43474770 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 100
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 107, 0

Conread position: 1-124
Cow position: chr5:47547916-47547794 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 98
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 16, 0

Conread position: 1-124
Cow position: chr5:62142471-62142594 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 100
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 1-125
Cow position: chr5:2500388-2500260 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 100
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 85, 0

Conread position: 1-125
Cow position: chr5:5938125-5938250 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 96
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 112, 0

Conread position: 1-125
Cow position: chr5:6504079-6503953 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 97
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 112, 0

Conread position: 1-125
Cow position: chr5:8994765-8994643 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 101
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 107, 0

Conread position: 1-125
Cow position: chr5:9090223-9090096 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 101
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 59, 111

Conread position: 1-125
Cow position: chr5:12563206-12563081 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 97
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 36, 0

Conread position: 1-125
Cow position: chr5:14420544-14420414 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 103
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 57, 0

Conread position: 1-125
Cow position: chr5:24348912-24349032 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 98
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 58, 0

Conread position: 1-125
Cow position: chr5:26377866-26377745 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 100
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 108, 0

Conread position: 1-125
Cow position: chr5:28224255-28224378 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 102
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 115, 16

Conread position: 1-125
Cow position: chr5:30253545-30253665 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 102
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 15, 0

Conread position: 1-125
Cow position: chr5:34528362-34528486 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 97
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 88, 108

Conread position: 1-125
Cow position: chr5:39447730-39447606 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 99
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 82, 108

Conread position: 1-125
Cow position: chr5:40889483-40889357 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 99
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 112, 0

Conread position: 1-125
Cow position: chr5:44994237-44994114 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 96
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 106, 0

Conread position: 1-125
Cow position: chr5:45226023-45225900 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 99
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 31, 0

Conread position: 1-125
Cow position: chr5:45705848-45705974 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 97
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 112, 0

Conread position: 1-125
Cow position: chr5:47888914-47888785 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 102
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 59, 0

Conread position: 1-125
Cow position: chr5:49362190-49362062 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 103
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 59, 16

Conread position: 1-125
Cow position: chr5:53835515-53835637 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 97
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 108, 0

Conread position: 1-125
Cow position: chr5:56135168-56135043 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 97
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 108, 0

Conread position: 1-125
Cow position: chr5:56820459-56820338 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 99
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 27, 0

Conread position: 1-125
Cow position: chr5:58144803-58144677 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 97
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 114, 0

Conread position: 1-125
Cow position: chr5:61455555-61455683 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 100
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 59, 0

Conread position: 1-125
Cow position: chr5:64844317-64844197 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 98
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 58, 0

Conread position: 1-125
Cow position: chr5:65752657-65752781 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 98
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 1-128
Cow position: chr5:43738151-43738028 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 102
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 78, 0

Conread position: 1-128
Cow position: chr5:58855904-58856030 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 102
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 117, 0

Conread position: 1-131
Cow position: chr5:66280991-66280862 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 100
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 107, 0

Conread position: 2-125
Cow position: chr5:45026115-45025993 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 99
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 26, 0

Conread position: 2-125
Cow position: chr5:59443450-59443324 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 103
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 58, 110

Conread position: 2-132
Cow position: chr5:14904271-14904144 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 103
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 10, 0

Conread position: 3-107
Cow position: chr5:18573973-18574077 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 88
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 3-123
Cow position: chr5:54311136-54311257 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 98
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 109, 25

Conread position: 3-125
Cow position: chr5:47317167-47317047 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 97
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 78, 0

Conread position: 4-128
Cow position: chr5:6033042-6033167 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 99
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 54, 106

Conread position: 6-123
Cow position: chr5:56137238-56137120 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 94
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 107, 0

Conread position: 11-125
Cow position: chr5:69461145-69461258 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 93
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 97, 0

Conread position: 11-125
Cow position: chr5:71454784-71454671 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 91
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 97, 0

Conread position: 1-107
Cow position: chr6:6117734-6117629 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 87
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 92, 0

Conread position: 1-111
Cow position: chr6:611376-611487 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 90
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 60, 0

Conread position: 1-121
Cow position: chr6:6343241-6343361 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 94
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 1-123
Cow position: chr6:607077-607203 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 100
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 58, 0

Conread position: 1-123
Cow position: chr6:12629839-12629961 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 100
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 108, 94

Conread position: 1-124
Cow position: chr6:388986-389107 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 97
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 25, 0

Conread position: 1-124
Cow position: chr6:44078336-44078455 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 97
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 78, 0

Conread position: 1-124
Cow position: chr6:51398616-51398739 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 103
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 1-124
Cow position: chr6:54885098-54884973 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 99
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 110, 0

Conread position: 1-124
Cow position: chr6:60467840-60467961 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 96
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 55, 0

Conread position: 1-125
Cow position: chr6:89093-88966 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 102
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 59, 111

Conread position: 1-125
Cow position: chr6:1002418-1002295 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 99
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 107, 0

Conread position: 1-125
Cow position: chr6:1886848-1886725 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 98
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 57, 0

Conread position: 1-125
Cow position: chr6:2012834-2012957 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 97
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 107, 0

Conread position: 1-125
Cow position: chr6:7539389-7539514 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 100
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 113, 97

Conread position: 1-125
Cow position: chr6:9008796-9008673 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 96
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 107, 0

Conread position: 1-125
Cow position: chr6:17068005-17067880 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 98
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 115, 0

Conread position: 1-125
Cow position: chr6:17997500-17997376 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 100
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 1-125
Cow position: chr6:32210812-32210690 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 99
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 54, 0

Conread position: 1-125
Cow position: chr6:34196333-34196212 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 98
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 59, 0

Conread position: 1-125
Cow position: chr6:36196029-36196152 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 100
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 107, 0

Conread position: 1-125
Cow position: chr6:40032007-40032131 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 100
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 48, 56

Conread position: 1-125
Cow position: chr6:40264382-40264262 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 101
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 58, 0

Conread position: 1-125
Cow position: chr6:45160477-45160356 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 101
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 65, 0

Conread position: 1-125
Cow position: chr6:52025839-52025714 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 103
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 108, 0

Conread position: 1-125
Cow position: chr6:53460757-53460634 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 97
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 107, 0

Conread position: 1-125
Cow position: chr6:54369085-54368960 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 97
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 116, 0

Conread position: 1-125
Cow position: chr6:54864852-54864732 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 99
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 59, 0

Conread position: 1-125
Cow position: chr6:59302010-59301882 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 102
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 62, 0

Conread position: 1-127
Cow position: chr6:25773566-25773442 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 97
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 65, 0

Conread position: 1-128
Cow position: chr6:47540341-47540473 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 104
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 56, 0

Conread position: 1-129
Cow position: chr6:13741511-13741637 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 99
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 7, 0

Conread position: 1-134
Cow position: chr6:12337799-12337934 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 103
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 109, 0

Conread position: 1-134
Cow position: chr6:37467724-37467589 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 102
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 113, 0

Conread position: 1-160
Cow position: chr6:3719191-3719028 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 127
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 67, 111

Conread position: 2-125
Cow position: chr6:21534875-21534994 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 102
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 63, 0

Conread position: 2-125
Cow position: chr6:24515377-24515255 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 96
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 106, 0

Conread position: 2-125
Cow position: chr6:37149009-37149126 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 98
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 75, 0

Conread position: 2-125
Cow position: chr6:37603339-37603461 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 96
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 106, 0

Conread position: 2-125
Cow position: chr6:59620485-59620610 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 97
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 111, 0

Conread position: 3-125
Cow position: chr6:51463799-51463674 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 102
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 64, 108

Conread position: 3-127
Cow position: chr6:60057839-60057713 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 98
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 108, 0

Conread position: 4-125
Cow position: chr6:47574723-47574843 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 94
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 102, 0

Conread position: 5-125
Cow position: chr6:24327319-24327200 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 94
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 52, 0

Conread position: 11-125
Cow position: chr6:68049260-68049375 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 91
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 96, 0

Conread position: 15-132
Cow position: chr6:22877331-22877212 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 97
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 93, 40

Conread position: 1-112
Cow position: chr7:15608227-15608342 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 94
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 59, 0

Conread position: 1-114
Cow position: chr7:1761536-1761648 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 92
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 34, 0

Conread position: 1-114
Cow position: chr7:40894338-40894455 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 95
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 59, 0

Conread position: 1-122
Cow position: chr7:17967301-17967180 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 96
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 55, 107

Conread position: 1-123
Cow position: chr7:28563565-28563441 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 97
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 111, 0

Conread position: 1-123
Cow position: chr7:39401772-39401898 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 99
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 57, 0

Conread position: 1-124
Cow position: chr7:15755632-15755510 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 95
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 107, 0

Conread position: 1-124
Cow position: chr7:19267552-19267429 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 98
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 1-124
Cow position: chr7:24778295-24778176 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 98
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 58, 0

Conread position: 1-124
Cow position: chr7:35652263-35652135 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 106
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 82, 0

Conread position: 1-124
Cow position: chr7:37951996-37952123 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 101
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 62, 0

Conread position: 1-124
Cow position: chr7:39518118-39518239 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 99
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 66, 0

Conread position: 1-124
Cow position: chr7:46823486-46823609 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 102
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 1-124
Cow position: chr7:48406683-48406556 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 100
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 66, 0

Conread position: 1-125
Cow position: chr7:3728908-3729032 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 99
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 1-125
Cow position: chr7:8785783-8785904 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 98
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 108, 0

Conread position: 1-125
Cow position: chr7:12212789-12212661 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 99
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 62, 0

Conread position: 1-125
Cow position: chr7:14005688-14005818 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 103
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 59, 0

Conread position: 1-125
Cow position: chr7:16022119-16022238 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 99
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 55, 0

Conread position: 1-125
Cow position: chr7:20415487-20415362 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 103
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 113, 0

Conread position: 1-125
Cow position: chr7:21649919-21650043 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 100
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 42, 108

Conread position: 1-125
Cow position: chr7:23646420-23646547 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 102
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 62, 111

Conread position: 1-125
Cow position: chr7:26631994-26631873 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 97
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 85, 0

Conread position: 1-125
Cow position: chr7:26911620-26911500 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 99
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 48, 86

Conread position: 1-125
Cow position: chr7:27136315-27136442 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 101
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 59, 111

Conread position: 1-125
Cow position: chr7:33068483-33068356 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 101
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 69, 0

Conread position: 1-125
Cow position: chr7:34433462-34433338 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 95
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 1-125
Cow position: chr7:37142547-37142422 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 98
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 116, 0

Conread position: 1-125
Cow position: chr7:38429780-38429908 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 100
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 60, 0

Conread position: 1-125
Cow position: chr7:39444784-39444660 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 97
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 71, 108

Conread position: 1-125
Cow position: chr7:40008635-40008761 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 101
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 115, 0

Conread position: 1-125
Cow position: chr7:40709926-40710053 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 103
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 59, 30

Conread position: 1-125
Cow position: chr7:43109714-43109590 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 99
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 112, 18

Conread position: 1-125
Cow position: chr7:43711036-43711159 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 99
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 107, 0

Conread position: 1-125
Cow position: chr7:47775685-47775812 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 99
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 114, 0

Conread position: 1-125
Cow position: chr7:50075909-50075783 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 104
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 55, 89

Conread position: 1-125
Cow position: chr7:52718817-52718694 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 101
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 106, 0

Conread position: 1-125
Cow position: chr7:52776938-52776813 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 100
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 81, 0

Conread position: 1-125
Cow position: chr7:53992515-53992642 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 102
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 34, 0

Conread position: 1-125
Cow position: chr7:56820754-56820631 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 98
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 105, 0

Conread position: 1-125
Cow position: chr7:61601565-61601437 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 99
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 58, 0

Conread position: 1-125
Cow position: chr7:63022957-63023081 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 101
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 1-125
Cow position: chr7:66894723-66894598 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 103
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 109, 0

Conread position: 1-127
Cow position: chr7:49942609-49942482 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 97
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 112, 0

Conread position: 1-128
Cow position: chr7:40566891-40567014 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 101
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 65, 0

Conread position: 1-132
Cow position: chr7:39042422-39042551 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 101
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 81, 0

Conread position: 1-182
Cow position: chr7:34004184-34004359 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 140
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 108, 135

Conread position: 2-124
Cow position: chr7:39451315-39451194 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 97
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 106, 0

Conread position: 2-124
Cow position: chr7:45927337-45927218 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 96
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 64, 0

Conread position: 2-125
Cow position: chr7:29474505-29474636 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 105
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 48, 0

Conread position: 2-125
Cow position: chr7:64269168-64269043 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 100
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 110, 0

Conread position: 3-125
Cow position: chr7:13928335-13928214 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 101
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 105, 0

Conread position: 3-125
Cow position: chr7:23619266-23619145 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 97
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 103, 0

Conread position: 3-125
Cow position: chr7:44095124-44095001 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 96
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 99, 0

Conread position: 5-125
Cow position: chr7:45658565-45658445 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 93
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 5-125
Cow position: chr7:61818116-61817998 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 95
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 50, 0

Conread position: 6-111
Cow position: chr7:43103633-43103528 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 88
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 11-125
Cow position: chr7:14029163-14029274 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 93
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 71, 0

Conread position: 11-128
Cow position: chr7:17756866-17756981 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 93
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 17, 0

Conread position: 17-123
Cow position: chr7:25393122-25393227 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 88
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 43, 0

Conread position: 17-124
Cow position: chr7:11422475-11422582 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 88
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 17-125
Cow position: chr7:61790522-61790414 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 90
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 102, 46

Conread position: 27-125
Cow position: chr7:46051498-46051596 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 82
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 1-114
Cow position: chr8:4940524-4940411 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 93
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 1-123
Cow position: chr8:20648954-20649079 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 99
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 57, 111

Conread position: 1-123
Cow position: chr8:47342520-47342644 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 96
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 112, 0

Conread position: 1-123
Cow position: chr8:55925984-55926109 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 99
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 59, 111

Conread position: 1-124
Cow position: chr8:9315696-9315819 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 100
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 112, 65

Conread position: 1-124
Cow position: chr8:20836913-20837033 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 96
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 78, 0

Conread position: 1-124
Cow position: chr8:33584947-33585070 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 102
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 1-124
Cow position: chr8:36648675-36648547 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 101
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 58, 0

Conread position: 1-124
Cow position: chr8:60488840-60488718 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 97
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 106, 0

Conread position: 1-125
Cow position: chr8:844155-844027 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 105
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 58, 24

Conread position: 1-125
Cow position: chr8:2164121-2163993 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 101
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 59, 0

Conread position: 1-125
Cow position: chr8:3704408-3704529 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 100
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 83, 0

Conread position: 1-125
Cow position: chr8:5485095-5484964 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 106
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 59, 0

Conread position: 1-125
Cow position: chr8:10337242-10337115 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 105
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 66, 111

Conread position: 1-125
Cow position: chr8:11606120-11606243 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 98
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 105, 0

Conread position: 1-125
Cow position: chr8:16296973-16296843 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 103
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 56, 0

Conread position: 1-125
Cow position: chr8:16487521-16487397 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 99
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 113, 66

Conread position: 1-125
Cow position: chr8:17180239-17180116 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 96
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 73, 0

Conread position: 1-125
Cow position: chr8:20354976-20354852 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 99
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 67, 30

Conread position: 1-125
Cow position: chr8:21826964-21826843 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 97
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 77, 0

Conread position: 1-125
Cow position: chr8:22183358-22183485 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 100
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 62, 119

Conread position: 1-125
Cow position: chr8:24390413-24390289 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 102
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 1-125
Cow position: chr8:24867960-24867833 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 102
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 59, 111

Conread position: 1-125
Cow position: chr8:25349494-25349621 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 101
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 71, 111

Conread position: 1-125
Cow position: chr8:26625660-26625781 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 97
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 94, 0

Conread position: 1-125
Cow position: chr8:32295953-32295821 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 105
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 47, 0

Conread position: 1-125
Cow position: chr8:35966248-35966120 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 105
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 66, 0

Conread position: 1-125
Cow position: chr8:36375726-36375601 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 103
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 56, 27

Conread position: 1-125
Cow position: chr8:37147905-37148030 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 99
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 108, 0

Conread position: 1-125
Cow position: chr8:39630556-39630683 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 104
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 66, 111

Conread position: 1-125
Cow position: chr8:43191240-43191115 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 99
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 108, 0

Conread position: 1-125
Cow position: chr8:45664560-45664683 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 98
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 108, 66

Conread position: 1-125
Cow position: chr8:47136225-47136100 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 102
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 67, 19

Conread position: 1-125
Cow position: chr8:47461650-47461778 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 100
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 62, 0

Conread position: 1-125
Cow position: chr8:47550150-47550024 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 98
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 112, 0

Conread position: 1-125
Cow position: chr8:53320762-53320890 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 99
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 58, 0

Conread position: 1-127
Cow position: chr8:20102986-20102860 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 97
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 1-127
Cow position: chr8:44437554-44437677 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 106
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 78, 0

Conread position: 1-127
Cow position: chr8:45690115-45689990 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 105
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 119, 40

Conread position: 1-128
Cow position: chr8:31253597-31253723 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 98
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 124, 0

Conread position: 1-128
Cow position: chr8:35504450-35504324 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 101
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 107, 0

Conread position: 1-134
Cow position: chr8:30245043-30244915 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 103
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 94, 0

Conread position: 1-135
Cow position: chr8:48437614-48437480 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 104
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 91, 119

Conread position: 1-141
Cow position: chr8:53485492-53485631 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 107
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 118, 0

Conread position: 1-164
Cow position: chr8:1327220-1327383 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 122
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 128, 16

Conread position: 1-164
Cow position: chr8:19642256-19642421 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 122
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 141, 0

Conread position: 2-124
Cow position: chr8:38357063-38356940 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 98
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 111, 63

Conread position: 2-125
Cow position: chr8:1999408-1999529 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 98
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 112, 84

Conread position: 2-125
Cow position: chr8:28295058-28294933 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 99
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 58, 108

Conread position: 2-125
Cow position: chr8:59043315-59043190 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 97
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 111, 0

Conread position: 2-140
Cow position: chr8:29625175-29625038 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 105
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 116, 0

Conread position: 3-125
Cow position: chr8:6233110-6232989 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 101
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 107, 0

Conread position: 4-125
Cow position: chr8:24329058-24328937 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 100
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 29, 38

Conread position: 11-125
Cow position: chr8:21961044-21961158 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 92
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 17-114
Cow position: chr8:61841786-61841887 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 87
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 46, 0

Conread position: 1-112
Cow position: chr9:55084043-55084154 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 90
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 1-114
Cow position: chr9:5756749-5756862 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 91
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 1-114
Cow position: chr9:30749331-30749444 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 89
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 1-114
Cow position: chr9:33940861-33940748 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 91
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 1-114
Cow position: chr9:34697041-34697156 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 93
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 62, 0

Conread position: 1-115
Cow position: chr9:8534429-8534545 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 96
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 66, 0

Conread position: 1-119
Cow position: chr9:52001261-52001144 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 94
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 11, 0

Conread position: 1-122
Cow position: chr9:18140041-18140163 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 97
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 93, 27

Conread position: 1-123
Cow position: chr9:9199530-9199651 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 95
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 105, 0

Conread position: 1-124
Cow position: chr9:5532207-5532079 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 101
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 59, 0

Conread position: 1-124
Cow position: chr9:38875320-38875445 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 104
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 69, 0

Conread position: 1-124
Cow position: chr9:54610977-54611104 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 100
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 59, 0

Conread position: 1-125
Cow position: chr9:1751588-1751465 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 96
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 107, 0

Conread position: 1-125
Cow position: chr9:4128530-4128653 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 99
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 117, 0

Conread position: 1-125
Cow position: chr9:5161812-5161934 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 97
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 65, 0

Conread position: 1-125
Cow position: chr9:5763376-5763503 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 101
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 59, 111

Conread position: 1-125
Cow position: chr9:6225198-6225323 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 98
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 111, 0

Conread position: 1-125
Cow position: chr9:8546572-8546449 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 98
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 107, 0

Conread position: 1-125
Cow position: chr9:9416153-9416274 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 99
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 108, 63

Conread position: 1-125
Cow position: chr9:9443343-9443467 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 97
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 1-125
Cow position: chr9:13994442-13994314 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 101
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 66, 0

Conread position: 1-125
Cow position: chr9:17871853-17871976 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 103
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 112, 85

Conread position: 1-125
Cow position: chr9:19539351-19539221 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 103
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 55, 0

Conread position: 1-125
Cow position: chr9:20318324-20318450 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 98
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 111, 0

Conread position: 1-125
Cow position: chr9:21888423-21888297 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 103
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 115, 0

Conread position: 1-125
Cow position: chr9:22151833-22151952 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 99
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 81, 0

Conread position: 1-125
Cow position: chr9:25969599-25969473 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 97
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 112, 0

Conread position: 1-125
Cow position: chr9:26404043-26403915 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 101
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 62, 0

Conread position: 1-125
Cow position: chr9:28948106-28947983 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 97
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 107, 0

Conread position: 1-125
Cow position: chr9:29184879-29185002 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 98
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 107, 0

Conread position: 1-125
Cow position: chr9:31347208-31347086 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 96
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 108, 0

Conread position: 1-125
Cow position: chr9:32812602-32812475 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 101
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 59, 111

Conread position: 1-125
Cow position: chr9:33598235-33598111 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 96
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 1-125
Cow position: chr9:34374675-34374801 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 103
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 59, 45

Conread position: 1-125
Cow position: chr9:35101121-35100998 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 102
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 107, 0

Conread position: 1-125
Cow position: chr9:35850153-35850030 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 97
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 107, 0

Conread position: 1-125
Cow position: chr9:36999807-36999931 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 95
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 1-125
Cow position: chr9:37069315-37069439 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 98
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 1-125
Cow position: chr9:38344148-38344021 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 106
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 59, 111

Conread position: 1-125
Cow position: chr9:41995968-41995840 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 100
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 58, 0

Conread position: 1-125
Cow position: chr9:42498083-42497956 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 101
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 114, 0

Conread position: 1-126
Cow position: chr9:18215655-18215778 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 98
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 94, 0

Conread position: 1-126
Cow position: chr9:20091292-20091171 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 99
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 16, 0

Conread position: 1-126
Cow position: chr9:32787853-32787980 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 98
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 36, 0

Conread position: 1-127
Cow position: chr9:5319883-5319758 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 99
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 107, 0

Conread position: 1-128
Cow position: chr9:16300317-16300439 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 101
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 23, 0

Conread position: 1-144
Cow position: chr9:49689190-49689046 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 108
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 128, 0

Conread position: 2-124
Cow position: chr9:5327507-5327387 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 96
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 88, 0

Conread position: 2-125
Cow position: chr9:30138379-30138259 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 98
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 80, 0

Conread position: 2-128
Cow position: chr9:23388425-23388550 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 99
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 106, 0

Conread position: 2-141
Cow position: chr9:5399972-5399834 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 111
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 124, 0

Conread position: 3-125
Cow position: chr9:18002697-18002821 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 100
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 110, 0

Conread position: 3-125
Cow position: chr9:27697478-27697598 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 98
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 87, 0

Conread position: 5-124
Cow position: chr9:18216850-18216972 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 98
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 53, 115

Conread position: 17-128
Cow position: chr9:8288855-8288746 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 92
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 91, 0

Conread position: 19-125
Cow position: chr9:50080810-50080916 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 87
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 29-125
Cow position: chr9:50667650-50667554 (view UCSC Genome Browser custom track)
Alignm length: 97
Alignm identity: 81
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 1-113
Cow position: chrX:7497045-7497157 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 89
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 1-114
Cow position: chrX:4633049-4632937 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 90
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 59, 0

Conread position: 1-114
Cow position: chrX:6639927-6640040 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 89
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 1-114
Cow position: chrX:21665792-21665679 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 93
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 1-118
Cow position: chrX:23091683-23091799 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 94
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 107, 0

Conread position: 1-121
Cow position: chrX:34441649-34441530 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 94
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 18, 0

Conread position: 1-122
Cow position: chrX:42247382-42247262 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 94
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 79, 0

Conread position: 1-123
Cow position: chrX:7382125-7382247 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 94
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 1-123
Cow position: chrX:9635379-9635258 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 96
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 107, 0

Conread position: 1-123
Cow position: chrX:39938721-39938596 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 99
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 69, 0

Conread position: 1-124
Cow position: chrX:9416891-9416769 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 98
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 107, 0

Conread position: 1-124
Cow position: chrX:17725776-17725898 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 96
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 107, 0

Conread position: 1-124
Cow position: chrX:19188738-19188862 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 97
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 66, 87

Conread position: 1-124
Cow position: chrX:21795297-21795420 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 96
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 1-124
Cow position: chrX:26876080-26875959 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 99
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 10, 0

Conread position: 1-124
Cow position: chrX:27772158-27772037 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 97
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 25, 0

Conread position: 1-124
Cow position: chrX:34238522-34238646 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 96
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 110, 0

Conread position: 1-125
Cow position: chrX:6234647-6234527 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 102
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 59, 0

Conread position: 1-125
Cow position: chrX:6278704-6278575 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 102
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 57, 0

Conread position: 1-125
Cow position: chrX:6544058-6544181 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 97
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 107, 0

Conread position: 1-125
Cow position: chrX:8797049-8797178 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 104
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 59, 0

Conread position: 1-125
Cow position: chrX:10831695-10831568 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 100
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 59, 113

Conread position: 1-125
Cow position: chrX:11073387-11073264 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 103
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 60, 94

Conread position: 1-125
Cow position: chrX:11655890-11656017 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 101
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 59, 110

Conread position: 1-125
Cow position: chrX:11856231-11856354 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 95
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 17, 0

Conread position: 1-125
Cow position: chrX:12309588-12309460 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 104
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 17, 100

Conread position: 1-125
Cow position: chrX:14924802-14924926 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 99
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 116, 18

Conread position: 1-125
Cow position: chrX:15007349-15007224 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 103
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 58, 38

Conread position: 1-125
Cow position: chrX:15139742-15139620 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 97
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 6, 0

Conread position: 1-125
Cow position: chrX:20697806-20697679 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 104
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 48, 0

Conread position: 1-125
Cow position: chrX:21593085-21593213 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 104
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 62, 0

Conread position: 1-125
Cow position: chrX:22074602-22074725 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 97
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 107, 0

Conread position: 1-125
Cow position: chrX:23514216-23514090 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 104
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 38, 16

Conread position: 1-125
Cow position: chrX:25237978-25238102 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 104
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 1-125
Cow position: chrX:26285781-26285907 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 99
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 110, 0

Conread position: 1-125
Cow position: chrX:29509642-29509516 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 98
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 113, 0

Conread position: 1-125
Cow position: chrX:29542417-29542294 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 99
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 107, 0

Conread position: 1-125
Cow position: chrX:30833044-30832922 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 96
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 79, 0

Conread position: 1-125
Cow position: chrX:30963070-30962948 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 96
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 64, 0

Conread position: 1-125
Cow position: chrX:31443020-31442896 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 107
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 0, 0

Conread position: 1-125
Cow position: chrX:32020320-32020194 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 97
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 112, 0

Conread position: 1-125
Cow position: chrX:34401799-34401923 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 102
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 44, 108

Conread position: 1-125
Cow position: chrX:34543589-34543713 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 99
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 113, 33

Conread position: 1-125
Cow position: chrX:35388104-35387977 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 102
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 59, 111

Conread position: 1-125
Cow position: chrX:35609788-35609914 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 102
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 69, 0

Conread position: 1-125
Cow position: chrX:36778209-36778337 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 100
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 71, 0

Conread position: 1-125
Cow position: chrX:36975751-36975877 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 100
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 114, 0

Conread position: 1-125
Cow position: chrX:38963908-38964029 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 97
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 80, 0

Conread position: 1-125
Cow position: chrX:40452411-40452284 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 100
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 57, 111

Conread position: 1-125
Cow position: chrX:41167163-41167039 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 98
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 1-125
Cow position: chrX:41743714-41743837 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 105
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 73, 0

Conread position: 1-125
Cow position: chrX:42492713-42492588 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 100
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 111, 0

Conread position: 1-125
Cow position: chrX:42855210-42855340 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 103
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 59, 0

Conread position: 1-125
Cow position: chrX:42874779-42874909 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 102
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 58, 0

Conread position: 1-125
Cow position: chrX:42994416-42994542 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 103
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 59, 39

Conread position: 1-127
Cow position: chrX:7336630-7336756 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 104
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 41, 10

Conread position: 1-127
Cow position: chrX:18695118-18694997 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 100
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 85, 0

Conread position: 1-128
Cow position: chrX:3579746-3579873 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 97
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 1-128
Cow position: chrX:35542693-35542823 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 103
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 59, 110

Conread position: 1-131
Cow position: chrX:26625875-26625739 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 107
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 62, 114

Conread position: 1-134
Cow position: chrX:33639773-33639904 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 103
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 120, 0

Conread position: 1-141
Cow position: chrX:38549250-38549396 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 112
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 59, 0

Conread position: 1-150
Cow position: chrX:3161212-3161064 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 110
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 124, 136

Conread position: 1-164
Cow position: chrX:17908482-17908322 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 119
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 58, 0

Conread position: 3-125
Cow position: chrX:16996310-16996431 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 101
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 110, 64

Conread position: 4-124
Cow position: chrX:40116226-40116345 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 94
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 104, 0

Conread position: 5-124
Cow position: chrX:11589783-11589663 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 96
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 45, 52

Conread position: 5-125
Cow position: chrX:34502724-34502847 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 99
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 51, 107

Conread position: 6-114
Cow position: chrX:18812061-18812169 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 92
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 17-127
Cow position: chrX:32820847-32820957 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 92
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 93, 9

Conread position: 23-134
Cow position: chrX:24201010-24201119 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 90
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 85, 0