Cow genome map
| Conread name: | Liv1-LVRM10161C10 |
| Conread position: | 4-587 |
| Cow position: | chr1:72038678-72038097 (view UCSC Genome Browser custom track) |
| Alignm length: | 593 |
| Alignm identity: | 431 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 142, 14 |
| Conread position: | 17-601 |
| Cow position: | chr1:69403909-69404482 (view UCSC Genome Browser custom track) |
| Alignm length: | 590 |
| Alignm identity: | 413 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 129, 180 |
| Conread position: | 396-601 |
| Cow position: | chr1:87969598-87969796 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 158 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 32, 22 |
| Conread position: | 17-594 |
| Cow position: | chr10:23440236-23439639 (view UCSC Genome Browser custom track) |
| Alignm length: | 608 |
| Alignm identity: | 384 |
| Alignm E-value: | 6e-36 |
| Alignm gaps (pig, cow): | 48, 125 |
| Conread position: | 254-601 |
| Cow position: | chr10:54931042-54930709 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 258 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 121, 20 |
| Conread position: | 17-368 |
| Cow position: | chr11:7117014-7117357 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 244 |
| Alignm E-value: | 4.99983e-42 |
| Alignm gaps (pig, cow): | 215, 121 |
| Conread position: | 261-601 |
| Cow position: | chr11:28391769-28392103 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 255 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 245, 66 |
| Conread position: | 441-600 |
| Cow position: | chr11:29232005-29231844 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 121 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 23, 128 |
| Conread position: | 17-600 |
| Cow position: | chr14:2294781-2295353 (view UCSC Genome Browser custom track) |
| Alignm length: | 594 |
| Alignm identity: | 417 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 133, 270 |
| Conread position: | 255-600 |
| Cow position: | chr14:48402412-48402071 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 252 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 142, 32 |
| Conread position: | 339-572 |
| Cow position: | chr14:25692770-25693001 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 176 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 66, 116 |
| Conread position: | 370-601 |
| Cow position: | chr14:34861311-34861530 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 166 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 185, 33 |
| Conread position: | 425-594 |
| Cow position: | chr14:47925995-47926159 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 126 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 82, 20 |
| Conread position: | 438-601 |
| Cow position: | chr14:18417425-18417589 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 124 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 18, 147 |
| Conread position: | 82-414 |
| Cow position: | chr15:40107616-40107925 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 244 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 64, 120 |
| Conread position: | 328-582 |
| Cow position: | chr15:11293623-11293371 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 185 |
| Alignm E-value: | 9.00054e-42 |
| Alignm gaps (pig, cow): | 140, 170 |
| Conread position: | 17-528 |
| Cow position: | chr16:23801950-23801441 (view UCSC Genome Browser custom track) |
| Alignm length: | 527 |
| Alignm identity: | 356 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 123, 198 |
| Conread position: | 17-581 |
| Cow position: | chr16:56119846-56120387 (view UCSC Genome Browser custom track) |
| Alignm length: | 572 |
| Alignm identity: | 376 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 131, 68 |
| Conread position: | 17-601 |
| Cow position: | chr16:26663916-26664494 (view UCSC Genome Browser custom track) |
| Alignm length: | 589 |
| Alignm identity: | 422 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 129, 182 |
| Conread position: | 237-599 |
| Cow position: | chr16:37482042-37481688 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 246 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 34, 42 |
| Conread position: | 2-600 |
| Cow position: | chr18:19405634-19405058 (view UCSC Genome Browser custom track) |
| Alignm length: | 601 |
| Alignm identity: | 392 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 225, 121 |
| Conread position: | 204-581 |
| Cow position: | chr2:79246125-79245744 (view UCSC Genome Browser custom track) |
| Alignm length: | 395 |
| Alignm identity: | 253 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 59, 28 |
| Conread position: | 225-600 |
| Cow position: | chr2:32434726-32434354 (view UCSC Genome Browser custom track) |
| Alignm length: | 381 |
| Alignm identity: | 271 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 63, 106 |
| Conread position: | 17-550 |
| Cow position: | chr20:8216424-8216951 (view UCSC Genome Browser custom track) |
| Alignm length: | 545 |
| Alignm identity: | 394 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 133, 182 |
| Conread position: | 77-601 |
| Cow position: | chr20:10854372-10853855 (view UCSC Genome Browser custom track) |
| Alignm length: | 537 |
| Alignm identity: | 370 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 116 |
| Conread position: | 391-585 |
| Cow position: | chr20:13769139-13769333 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 152 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 12, 22 |
| Conread position: | 14-601 |
| Cow position: | chr22:44397296-44397858 (view UCSC Genome Browser custom track) |
| Alignm length: | 591 |
| Alignm identity: | 405 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 132, 6 |
| Conread position: | 17-601 |
| Cow position: | chr22:1281878-1281307 (view UCSC Genome Browser custom track) |
| Alignm length: | 598 |
| Alignm identity: | 436 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 129, 89 |
| Conread position: | 18-600 |
| Cow position: | chr22:18815527-18814939 (view UCSC Genome Browser custom track) |
| Alignm length: | 594 |
| Alignm identity: | 430 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 128, 199 |
| Conread position: | 156-580 |
| Cow position: | chr22:24536745-24537167 (view UCSC Genome Browser custom track) |
| Alignm length: | 437 |
| Alignm identity: | 294 |
| Alignm E-value: | 7.00005e-41 |
| Alignm gaps (pig, cow): | 56, 16 |
| Conread position: | 5-600 |
| Cow position: | chr23:618623-618050 (view UCSC Genome Browser custom track) |
| Alignm length: | 603 |
| Alignm identity: | 429 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 141, 21 |
| Conread position: | 21-601 |
| Cow position: | chr23:13511966-13512529 (view UCSC Genome Browser custom track) |
| Alignm length: | 586 |
| Alignm identity: | 418 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 177 |
| Conread position: | 278-578 |
| Cow position: | chr23:19451251-19451551 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 221 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 152, 144 |
| Conread position: | 14-190 |
| Cow position: | chr24:12143401-12143227 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 133 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 71, 80 |
| Conread position: | 280-585 |
| Cow position: | chr24:17300710-17300413 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 230 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 247, 127 |
| Conread position: | 1-557 |
| Cow position: | chr26:1626879-1627436 (view UCSC Genome Browser custom track) |
| Alignm length: | 571 |
| Alignm identity: | 391 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 110 |
| Conread position: | 267-577 |
| Cow position: | chr27:16425824-16426134 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 235 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 32 |
| Conread position: | 19-600 |
| Cow position: | chr28:15586993-15587547 (view UCSC Genome Browser custom track) |
| Alignm length: | 584 |
| Alignm identity: | 394 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 148, 69 |
| Conread position: | 16-582 |
| Cow position: | chr29:20252028-20252581 (view UCSC Genome Browser custom track) |
| Alignm length: | 574 |
| Alignm identity: | 417 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 130, 183 |
| Conread position: | 36-586 |
| Cow position: | chr29:2949471-2948947 (view UCSC Genome Browser custom track) |
| Alignm length: | 563 |
| Alignm identity: | 387 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 85, 105 |
| Conread position: | 42-540 |
| Cow position: | chr29:31096494-31095999 (view UCSC Genome Browser custom track) |
| Alignm length: | 507 |
| Alignm identity: | 349 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 72 |
| Conread position: | 5-577 |
| Cow position: | chr3:56397952-56398518 (view UCSC Genome Browser custom track) |
| Alignm length: | 588 |
| Alignm identity: | 402 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 196 |
| Conread position: | 17-601 |
| Cow position: | chr3:19720893-19720306 (view UCSC Genome Browser custom track) |
| Alignm length: | 610 |
| Alignm identity: | 419 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 97, 19 |
| Conread position: | 22-237 |
| Cow position: | chr3:34090590-34090375 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 157 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 167, 95 |
| Conread position: | 50-601 |
| Cow position: | chr3:56146133-56146655 (view UCSC Genome Browser custom track) |
| Alignm length: | 557 |
| Alignm identity: | 396 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 82 |
| Conread position: | 383-563 |
| Cow position: | chr3:50126253-50126078 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 133 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 44, 29 |
| Conread position: | 425-582 |
| Cow position: | chr3:23206695-23206536 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 117 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 84, 39 |
| Conread position: | 7-581 |
| Cow position: | chr4:46665090-46665675 (view UCSC Genome Browser custom track) |
| Alignm length: | 593 |
| Alignm identity: | 416 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 39 |
| Conread position: | 14-581 |
| Cow position: | chr4:44924940-44924393 (view UCSC Genome Browser custom track) |
| Alignm length: | 573 |
| Alignm identity: | 403 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 130, 150 |
| Conread position: | 188-585 |
| Cow position: | chr5:24151629-24152018 (view UCSC Genome Browser custom track) |
| Alignm length: | 401 |
| Alignm identity: | 290 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 299, 20 |
| Conread position: | 1-577 |
| Cow position: | chr6:10644544-10645100 (view UCSC Genome Browser custom track) |
| Alignm length: | 588 |
| Alignm identity: | 425 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 91 |
| Conread position: | 332-600 |
| Cow position: | chr6:66745125-66745387 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 204 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 177, 36 |
| Conread position: | 332-600 |
| Cow position: | chr6:67265016-67265278 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 204 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 177, 36 |
| Conread position: | 2-581 |
| Cow position: | chr7:24058341-24058907 (view UCSC Genome Browser custom track) |
| Alignm length: | 589 |
| Alignm identity: | 412 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 113, 6 |
| Conread position: | 2-601 |
| Cow position: | chr7:27348782-27348200 (view UCSC Genome Browser custom track) |
| Alignm length: | 610 |
| Alignm identity: | 413 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 157 |
| Conread position: | 17-585 |
| Cow position: | chr7:67676010-67676553 (view UCSC Genome Browser custom track) |
| Alignm length: | 576 |
| Alignm identity: | 414 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 129, 24 |
| Conread position: | 304-585 |
| Cow position: | chr7:49829138-49828861 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 205 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 7, 135 |
| Conread position: | 4-458 |
| Cow position: | chr8:11969199-11968748 (view UCSC Genome Browser custom track) |
| Alignm length: | 476 |
| Alignm identity: | 338 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 200 |
| Conread position: | 10-601 |
| Cow position: | chr8:50960507-50959937 (view UCSC Genome Browser custom track) |
| Alignm length: | 595 |
| Alignm identity: | 409 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 119 |
| Conread position: | 33-586 |
| Cow position: | chr8:42817136-42816612 (view UCSC Genome Browser custom track) |
| Alignm length: | 559 |
| Alignm identity: | 345 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 49, 89 |
| Conread position: | 21-601 |
| Cow position: | chr9:13475030-13474448 (view UCSC Genome Browser custom track) |
| Alignm length: | 596 |
| Alignm identity: | 418 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 125, 54 |
| Conread position: | 29-592 |
| Cow position: | chr9:22089289-22089822 (view UCSC Genome Browser custom track) |
| Alignm length: | 567 |
| Alignm identity: | 369 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 242, 66 |
| Conread position: | 41-601 |
| Cow position: | chr9:50698078-50698625 (view UCSC Genome Browser custom track) |
| Alignm length: | 567 |
| Alignm identity: | 415 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 105, 157 |
| Conread position: | 314-601 |
| Cow position: | chr9:4836301-4836015 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 210 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 110, 136 |
| Conread position: | 343-585 |
| Cow position: | chr9:8402439-8402688 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 180 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 70, 44 |
| Conread position: | 2-563 |
| Cow position: | chrX:13053646-13054210 (view UCSC Genome Browser custom track) |
| Alignm length: | 581 |
| Alignm identity: | 414 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 95 |
| Conread position: | 22-601 |
| Cow position: | chrX:26426903-26426358 (view UCSC Genome Browser custom track) |
| Alignm length: | 581 |
| Alignm identity: | 395 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 145, 95 |
| Conread position: | 92-493 |
| Cow position: | chrX:15590713-15591106 (view UCSC Genome Browser custom track) |
| Alignm length: | 403 |
| Alignm identity: | 295 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 109 |
| Conread position: | 284-601 |
| Cow position: | chrX:46235659-46235978 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 253 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 166, 121 |
| Conread position: | 299-601 |
| Cow position: | chrX:25430357-25430067 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 207 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 91, 137 |