Cow genome map

Conread name: Liv1-LVRM1D010191

Conread position: 1-275
Cow position: chr1:67287708-67287987 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 0

Conread position: 1-324
Cow position: chr1:58882895-58882557 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 0

Conread position: 1-441
Cow position: chr1:77115815-77115389 (view UCSC Genome Browser custom track)
Alignm length: 448
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 190

Conread position: 1-489
Cow position: chr1:88269349-88268860 (view UCSC Genome Browser custom track)
Alignm length: 504
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 178

Conread position: 1-527
Cow position: chr1:31402574-31402054 (view UCSC Genome Browser custom track)
Alignm length: 530
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 193

Conread position: 1-549
Cow position: chr1:24652174-24652709 (view UCSC Genome Browser custom track)
Alignm length: 554
Alignm identity: 422
Alignm E-value: 0
Alignm gaps (pig, cow): 198, 29

Conread position: 1-552
Cow position: chr1:11860361-11859804 (view UCSC Genome Browser custom track)
Alignm length: 570
Alignm identity: 406
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 30

Conread position: 1-552
Cow position: chr1:31417621-31417062 (view UCSC Genome Browser custom track)
Alignm length: 577
Alignm identity: 434
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 33

Conread position: 1-552
Cow position: chr1:53364440-53365004 (view UCSC Genome Browser custom track)
Alignm length: 579
Alignm identity: 415
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 193

Conread position: 1-552
Cow position: chr1:55321185-55320626 (view UCSC Genome Browser custom track)
Alignm length: 568
Alignm identity: 417
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 140

Conread position: 1-552
Cow position: chr1:79636093-79635542 (view UCSC Genome Browser custom track)
Alignm length: 561
Alignm identity: 434
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 282

Conread position: 2-525
Cow position: chr1:87858237-87858739 (view UCSC Genome Browser custom track)
Alignm length: 537
Alignm identity: 345
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 61, 96

Conread position: 3-321
Cow position: chr1:7141897-7141579 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 179

Conread position: 3-365
Cow position: chr1:61730660-61730297 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 246
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 35, 26

Conread position: 3-368
Cow position: chr1:1460307-1459950 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 193

Conread position: 3-489
Cow position: chr1:89769822-89769330 (view UCSC Genome Browser custom track)
Alignm length: 496
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 196, 76

Conread position: 3-538
Cow position: chr1:61310109-61310653 (view UCSC Genome Browser custom track)
Alignm length: 548
Alignm identity: 396
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 193

Conread position: 3-546
Cow position: chr1:9259368-9259925 (view UCSC Genome Browser custom track)
Alignm length: 558
Alignm identity: 401
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 0

Conread position: 3-552
Cow position: chr1:5356016-5356574 (view UCSC Genome Browser custom track)
Alignm length: 560
Alignm identity: 405
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 192

Conread position: 3-552
Cow position: chr1:23052652-23053191 (view UCSC Genome Browser custom track)
Alignm length: 559
Alignm identity: 419
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 275

Conread position: 3-552
Cow position: chr1:43570528-43569967 (view UCSC Genome Browser custom track)
Alignm length: 568
Alignm identity: 387
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 191

Conread position: 3-552
Cow position: chr1:55156112-55155560 (view UCSC Genome Browser custom track)
Alignm length: 562
Alignm identity: 409
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 181

Conread position: 3-552
Cow position: chr1:55276144-55275584 (view UCSC Genome Browser custom track)
Alignm length: 565
Alignm identity: 407
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 258

Conread position: 3-552
Cow position: chr1:67292520-67293071 (view UCSC Genome Browser custom track)
Alignm length: 559
Alignm identity: 368
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 179

Conread position: 3-552
Cow position: chr1:67834250-67833688 (view UCSC Genome Browser custom track)
Alignm length: 570
Alignm identity: 393
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 285

Conread position: 3-552
Cow position: chr1:86595607-86595047 (view UCSC Genome Browser custom track)
Alignm length: 561
Alignm identity: 407
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 0

Conread position: 4-550
Cow position: chr1:57697273-57696719 (view UCSC Genome Browser custom track)
Alignm length: 560
Alignm identity: 420
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 438

Conread position: 4-552
Cow position: chr1:30519482-30520042 (view UCSC Genome Browser custom track)
Alignm length: 566
Alignm identity: 421
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 61

Conread position: 4-552
Cow position: chr1:85792569-85793127 (view UCSC Genome Browser custom track)
Alignm length: 560
Alignm identity: 405
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 191

Conread position: 5-552
Cow position: chr1:69403897-69404450 (view UCSC Genome Browser custom track)
Alignm length: 560
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 191

Conread position: 6-295
Cow position: chr1:25179134-25178845 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 185

Conread position: 6-295
Cow position: chr1:48246725-48247024 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 0

Conread position: 6-322
Cow position: chr1:3385132-3384812 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 78

Conread position: 6-345
Cow position: chr1:76620791-76620446 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 283

Conread position: 6-386
Cow position: chr1:6195127-6195521 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 299

Conread position: 6-411
Cow position: chr1:74285897-74285482 (view UCSC Genome Browser custom track)
Alignm length: 417
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 190

Conread position: 6-447
Cow position: chr1:69921542-69921094 (view UCSC Genome Browser custom track)
Alignm length: 451
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 189

Conread position: 6-525
Cow position: chr1:52358366-52357828 (view UCSC Genome Browser custom track)
Alignm length: 541
Alignm identity: 404
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 190

Conread position: 6-526
Cow position: chr1:72081659-72082195 (view UCSC Genome Browser custom track)
Alignm length: 541
Alignm identity: 405
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 161

Conread position: 6-549
Cow position: chr1:27178570-27178052 (view UCSC Genome Browser custom track)
Alignm length: 551
Alignm identity: 368
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 114

Conread position: 6-552
Cow position: chr1:5502859-5503414 (view UCSC Genome Browser custom track)
Alignm length: 560
Alignm identity: 413
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 186

Conread position: 6-552
Cow position: chr1:12061321-12060760 (view UCSC Genome Browser custom track)
Alignm length: 564
Alignm identity: 409
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 187

Conread position: 6-552
Cow position: chr1:17940902-17940324 (view UCSC Genome Browser custom track)
Alignm length: 580
Alignm identity: 420
Alignm E-value: 0
Alignm gaps (pig, cow): 138, 532

Conread position: 6-552
Cow position: chr1:25550854-25551410 (view UCSC Genome Browser custom track)
Alignm length: 561
Alignm identity: 431
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 188

Conread position: 6-552
Cow position: chr1:28873973-28874513 (view UCSC Genome Browser custom track)
Alignm length: 557
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 190

Conread position: 6-552
Cow position: chr1:33551819-33552375 (view UCSC Genome Browser custom track)
Alignm length: 559
Alignm identity: 434
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 190

Conread position: 6-552
Cow position: chr1:42737350-42737879 (view UCSC Genome Browser custom track)
Alignm length: 556
Alignm identity: 414
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 190

Conread position: 6-552
Cow position: chr1:49973295-49972723 (view UCSC Genome Browser custom track)
Alignm length: 574
Alignm identity: 424
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 526

Conread position: 6-552
Cow position: chr1:55777476-55778034 (view UCSC Genome Browser custom track)
Alignm length: 569
Alignm identity: 416
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 190

Conread position: 6-552
Cow position: chr1:56143444-56142898 (view UCSC Genome Browser custom track)
Alignm length: 557
Alignm identity: 410
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 178

Conread position: 6-552
Cow position: chr1:62243748-62243207 (view UCSC Genome Browser custom track)
Alignm length: 560
Alignm identity: 427
Alignm E-value: 0
Alignm gaps (pig, cow): 190, 240

Conread position: 6-552
Cow position: chr1:62805288-62804729 (view UCSC Genome Browser custom track)
Alignm length: 565
Alignm identity: 438
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 436

Conread position: 6-552
Cow position: chr1:65387212-65387762 (view UCSC Genome Browser custom track)
Alignm length: 560
Alignm identity: 431
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 185

Conread position: 6-552
Cow position: chr1:68606649-68606102 (view UCSC Genome Browser custom track)
Alignm length: 559
Alignm identity: 432
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 187

Conread position: 6-552
Cow position: chr1:72984395-72984920 (view UCSC Genome Browser custom track)
Alignm length: 554
Alignm identity: 405
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 143

Conread position: 6-552
Cow position: chr1:73070163-73069616 (view UCSC Genome Browser custom track)
Alignm length: 561
Alignm identity: 410
Alignm E-value: 0
Alignm gaps (pig, cow): 265, 152

Conread position: 6-552
Cow position: chr1:73198132-73197587 (view UCSC Genome Browser custom track)
Alignm length: 559
Alignm identity: 392
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 177

Conread position: 6-552
Cow position: chr1:82923295-82922708 (view UCSC Genome Browser custom track)
Alignm length: 592
Alignm identity: 416
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 461

Conread position: 6-552
Cow position: chr1:91892223-91891673 (view UCSC Genome Browser custom track)
Alignm length: 556
Alignm identity: 413
Alignm E-value: 0
Alignm gaps (pig, cow): 190, 181

Conread position: 6-552
Cow position: chr1:93855409-93855960 (view UCSC Genome Browser custom track)
Alignm length: 558
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 190

Conread position: 6-552
Cow position: chr1:94660567-94661118 (view UCSC Genome Browser custom track)
Alignm length: 562
Alignm identity: 424
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 135

Conread position: 8-217
Cow position: chr1:88374910-88374702 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 162
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 28, 112

Conread position: 8-359
Cow position: chr1:16216780-16216428 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 10

Conread position: 8-547
Cow position: chr1:57662919-57663460 (view UCSC Genome Browser custom track)
Alignm length: 556
Alignm identity: 365
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 173

Conread position: 9-552
Cow position: chr1:30534122-30533574 (view UCSC Genome Browser custom track)
Alignm length: 553
Alignm identity: 417
Alignm E-value: 0
Alignm gaps (pig, cow): 187, 172

Conread position: 9-552
Cow position: chr1:38419571-38420108 (view UCSC Genome Browser custom track)
Alignm length: 552
Alignm identity: 387
Alignm E-value: 0
Alignm gaps (pig, cow): 270, 35

Conread position: 9-552
Cow position: chr1:56193272-56192717 (view UCSC Genome Browser custom track)
Alignm length: 557
Alignm identity: 413
Alignm E-value: 0
Alignm gaps (pig, cow): 179, 427

Conread position: 9-552
Cow position: chr1:99914319-99914875 (view UCSC Genome Browser custom track)
Alignm length: 559
Alignm identity: 426
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 189

Conread position: 10-543
Cow position: chr1:29035180-29035704 (view UCSC Genome Browser custom track)
Alignm length: 552
Alignm identity: 393
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 52

Conread position: 10-552
Cow position: chr1:57657780-57658342 (view UCSC Genome Browser custom track)
Alignm length: 568
Alignm identity: 409
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 185

Conread position: 10-552
Cow position: chr1:72038673-72038120 (view UCSC Genome Browser custom track)
Alignm length: 561
Alignm identity: 430
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 229

Conread position: 10-552
Cow position: chr1:102434141-102433594 (view UCSC Genome Browser custom track)
Alignm length: 552
Alignm identity: 415
Alignm E-value: 0
Alignm gaps (pig, cow): 261, 181

Conread position: 17-552
Cow position: chr1:22619732-22619211 (view UCSC Genome Browser custom track)
Alignm length: 542
Alignm identity: 398
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 35

Conread position: 21-503
Cow position: chr1:32908728-32909208 (view UCSC Genome Browser custom track)
Alignm length: 503
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 86

Conread position: 30-552
Cow position: chr1:34693608-34694129 (view UCSC Genome Browser custom track)
Alignm length: 534
Alignm identity: 427
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 121

Conread position: 31-302
Cow position: chr1:38416797-38417055 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 168, 142

Conread position: 36-552
Cow position: chr1:79456023-79455507 (view UCSC Genome Browser custom track)
Alignm length: 525
Alignm identity: 396
Alignm E-value: 0
Alignm gaps (pig, cow): 235, 6

Conread position: 39-278
Cow position: chr1:59648220-59648456 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 174
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 207, 138

Conread position: 39-319
Cow position: chr1:9381674-9381396 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 236, 75

Conread position: 39-552
Cow position: chr1:3934332-3933811 (view UCSC Genome Browser custom track)
Alignm length: 524
Alignm identity: 394
Alignm E-value: 0
Alignm gaps (pig, cow): 157, 492

Conread position: 39-552
Cow position: chr1:31365169-31364652 (view UCSC Genome Browser custom track)
Alignm length: 525
Alignm identity: 387
Alignm E-value: 0
Alignm gaps (pig, cow): 232, 116

Conread position: 39-552
Cow position: chr1:80358248-80357728 (view UCSC Genome Browser custom track)
Alignm length: 528
Alignm identity: 385
Alignm E-value: 0
Alignm gaps (pig, cow): 151, 266

Conread position: 44-223
Cow position: chr1:18016178-18016359 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 144
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 6, 110

Conread position: 44-538
Cow position: chr1:56724100-56724583 (view UCSC Genome Browser custom track)
Alignm length: 507
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 80

Conread position: 48-291
Cow position: chr1:43636615-43636854 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 196
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 195

Conread position: 59-552
Cow position: chr1:32566973-32566478 (view UCSC Genome Browser custom track)
Alignm length: 504
Alignm identity: 384
Alignm E-value: 0
Alignm gaps (pig, cow): 137, 122

Conread position: 59-552
Cow position: chr1:33713021-33713517 (view UCSC Genome Browser custom track)
Alignm length: 502
Alignm identity: 398
Alignm E-value: 0
Alignm gaps (pig, cow): 212, 28

Conread position: 66-480
Cow position: chr1:27541699-27542083 (view UCSC Genome Browser custom track)
Alignm length: 420
Alignm identity: 289
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 303, 127

Conread position: 73-514
Cow position: chr1:84226769-84227200 (view UCSC Genome Browser custom track)
Alignm length: 447
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 204, 120

Conread position: 112-545
Cow position: chr1:16581501-16581089 (view UCSC Genome Browser custom track)
Alignm length: 442
Alignm identity: 296
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 23, 16

Conread position: 112-545
Cow position: chr1:16587077-16586665 (view UCSC Genome Browser custom track)
Alignm length: 442
Alignm identity: 296
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 31, 16

Conread position: 129-452
Cow position: chr1:31193702-31193387 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 224
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 142, 166

Conread position: 138-552
Cow position: chr1:58178075-58177681 (view UCSC Genome Browser custom track)
Alignm length: 422
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 33

Conread position: 156-540
Cow position: chr1:57569012-57569402 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 14

Conread position: 159-552
Cow position: chr1:51877959-51877557 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 271
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 139, 92

Conread position: 166-552
Cow position: chr1:40056157-40056550 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 171

Conread position: 166-552
Cow position: chr1:89481906-89482270 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 301, 23

Conread position: 179-552
Cow position: chr1:89495151-89494774 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 85

Conread position: 180-536
Cow position: chr1:81841400-81841039 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 250
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 81, 13

Conread position: 203-552
Cow position: chr1:58338051-58338413 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 93

Conread position: 215-552
Cow position: chr1:24443256-24442915 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 71

Conread position: 229-552
Cow position: chr1:4209323-4209654 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 0

Conread position: 244-545
Cow position: chr1:81927499-81927211 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 211
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 6, 19

Conread position: 254-546
Cow position: chr1:41782167-41781872 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 218
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 17, 64

Conread position: 281-466
Cow position: chr1:29412994-29412799 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 145
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 45, 187

Conread position: 301-552
Cow position: chr1:82477164-82477422 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 182
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 69, 0

Conread position: 318-552
Cow position: chr1:18241011-18240778 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 179
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 42, 127

Conread position: 319-500
Cow position: chr1:48247826-48248012 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 141
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 40, 127

Conread position: 321-552
Cow position: chr1:18193104-18193343 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 178
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 49, 0

Conread position: 326-552
Cow position: chr1:77922920-77923154 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 167
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 43, 0

Conread position: 328-552
Cow position: chr1:85532144-85531909 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 169
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 42, 155

Conread position: 377-552
Cow position: chr1:26584370-26584546 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 128
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 87, 13

Conread position: 1-152
Cow position: chr10:29631860-29631703 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 119
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 37, 0

Conread position: 1-203
Cow position: chr10:26597525-26597735 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 170
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 0

Conread position: 1-459
Cow position: chr10:38537586-38537124 (view UCSC Genome Browser custom track)
Alignm length: 467
Alignm identity: 345
Alignm E-value: 0
Alignm gaps (pig, cow): 195, 20

Conread position: 1-545
Cow position: chr10:29110230-29109688 (view UCSC Genome Browser custom track)
Alignm length: 562
Alignm identity: 390
Alignm E-value: 0
Alignm gaps (pig, cow): 149, 40

Conread position: 1-551
Cow position: chr10:50133159-50132618 (view UCSC Genome Browser custom track)
Alignm length: 558
Alignm identity: 349
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 42, 176

Conread position: 1-552
Cow position: chr10:29845737-29845184 (view UCSC Genome Browser custom track)
Alignm length: 562
Alignm identity: 426
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 195

Conread position: 1-552
Cow position: chr10:50135472-50136036 (view UCSC Genome Browser custom track)
Alignm length: 575
Alignm identity: 443
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 125

Conread position: 1-552
Cow position: chr10:53246496-53245954 (view UCSC Genome Browser custom track)
Alignm length: 569
Alignm identity: 363
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 43, 33

Conread position: 3-361
Cow position: chr10:42752043-42752404 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 150

Conread position: 3-488
Cow position: chr10:41158354-41158841 (view UCSC Genome Browser custom track)
Alignm length: 502
Alignm identity: 362
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 257

Conread position: 3-531
Cow position: chr10:17433256-17433803 (view UCSC Genome Browser custom track)
Alignm length: 552
Alignm identity: 406
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 231

Conread position: 3-536
Cow position: chr10:38544998-38544479 (view UCSC Genome Browser custom track)
Alignm length: 542
Alignm identity: 396
Alignm E-value: 0
Alignm gaps (pig, cow): 366, 33

Conread position: 3-542
Cow position: chr10:27664352-27663808 (view UCSC Genome Browser custom track)
Alignm length: 551
Alignm identity: 402
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 192

Conread position: 3-549
Cow position: chr10:11684733-11684167 (view UCSC Genome Browser custom track)
Alignm length: 567
Alignm identity: 405
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 0

Conread position: 3-549
Cow position: chr10:16477667-16478219 (view UCSC Genome Browser custom track)
Alignm length: 580
Alignm identity: 403
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 65

Conread position: 3-552
Cow position: chr10:1665622-1665063 (view UCSC Genome Browser custom track)
Alignm length: 561
Alignm identity: 407
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 192

Conread position: 3-552
Cow position: chr10:14804747-14805314 (view UCSC Genome Browser custom track)
Alignm length: 569
Alignm identity: 407
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 201

Conread position: 3-552
Cow position: chr10:14862601-14863126 (view UCSC Genome Browser custom track)
Alignm length: 557
Alignm identity: 403
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 82

Conread position: 3-552
Cow position: chr10:21399759-21399215 (view UCSC Genome Browser custom track)
Alignm length: 561
Alignm identity: 399
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 264

Conread position: 3-552
Cow position: chr10:21739837-21739287 (view UCSC Genome Browser custom track)
Alignm length: 560
Alignm identity: 396
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 192

Conread position: 3-552
Cow position: chr10:39779208-39778653 (view UCSC Genome Browser custom track)
Alignm length: 569
Alignm identity: 435
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 300

Conread position: 3-552
Cow position: chr10:40151333-40150795 (view UCSC Genome Browser custom track)
Alignm length: 560
Alignm identity: 425
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 264

Conread position: 3-552
Cow position: chr10:41568012-41568569 (view UCSC Genome Browser custom track)
Alignm length: 561
Alignm identity: 409
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 191

Conread position: 3-552
Cow position: chr10:41877829-41878391 (view UCSC Genome Browser custom track)
Alignm length: 563
Alignm identity: 408
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 0

Conread position: 3-552
Cow position: chr10:44708703-44708143 (view UCSC Genome Browser custom track)
Alignm length: 564
Alignm identity: 404
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 244

Conread position: 3-552
Cow position: chr10:47907843-47908402 (view UCSC Genome Browser custom track)
Alignm length: 561
Alignm identity: 405
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 267

Conread position: 3-552
Cow position: chr10:58097104-58096562 (view UCSC Genome Browser custom track)
Alignm length: 557
Alignm identity: 377
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 193

Conread position: 4-552
Cow position: chr10:57556426-57555867 (view UCSC Genome Browser custom track)
Alignm length: 561
Alignm identity: 401
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 188

Conread position: 5-391
Cow position: chr10:21480851-21481239 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 52

Conread position: 5-549
Cow position: chr10:2120098-2119536 (view UCSC Genome Browser custom track)
Alignm length: 570
Alignm identity: 430
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 163

Conread position: 5-552
Cow position: chr10:55094181-55094734 (view UCSC Genome Browser custom track)
Alignm length: 560
Alignm identity: 408
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 190

Conread position: 6-197
Cow position: chr10:21487837-21488028 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 159
Alignm E-value: 0
Alignm gaps (pig, cow): 175, 113

Conread position: 6-523
Cow position: chr10:16926450-16926976 (view UCSC Genome Browser custom track)
Alignm length: 535
Alignm identity: 402
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 56

Conread position: 6-552
Cow position: chr10:1378422-1378964 (view UCSC Genome Browser custom track)
Alignm length: 552
Alignm identity: 427
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 190

Conread position: 6-552
Cow position: chr10:7281172-7280637 (view UCSC Genome Browser custom track)
Alignm length: 557
Alignm identity: 423
Alignm E-value: 0
Alignm gaps (pig, cow): 265, 185

Conread position: 6-552
Cow position: chr10:14334933-14334366 (view UCSC Genome Browser custom track)
Alignm length: 569
Alignm identity: 429
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 190

Conread position: 6-552
Cow position: chr10:19512509-19513045 (view UCSC Genome Browser custom track)
Alignm length: 555
Alignm identity: 410
Alignm E-value: 0
Alignm gaps (pig, cow): 363, 183

Conread position: 6-552
Cow position: chr10:30684597-30684024 (view UCSC Genome Browser custom track)
Alignm length: 576
Alignm identity: 423
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 207

Conread position: 6-552
Cow position: chr10:32701644-32702195 (view UCSC Genome Browser custom track)
Alignm length: 556
Alignm identity: 416
Alignm E-value: 0
Alignm gaps (pig, cow): 265, 123

Conread position: 6-552
Cow position: chr10:38344444-38343889 (view UCSC Genome Browser custom track)
Alignm length: 564
Alignm identity: 423
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 190

Conread position: 6-552
Cow position: chr10:39040392-39039826 (view UCSC Genome Browser custom track)
Alignm length: 573
Alignm identity: 425
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 298

Conread position: 6-552
Cow position: chr10:57989075-57988526 (view UCSC Genome Browser custom track)
Alignm length: 558
Alignm identity: 425
Alignm E-value: 0
Alignm gaps (pig, cow): 163, 36

Conread position: 9-551
Cow position: chr10:64145849-64146394 (view UCSC Genome Browser custom track)
Alignm length: 554
Alignm identity: 404
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 110

Conread position: 11-546
Cow position: chr10:58812826-58812300 (view UCSC Genome Browser custom track)
Alignm length: 546
Alignm identity: 362
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 43

Conread position: 31-551
Cow position: chr10:38849246-38849748 (view UCSC Genome Browser custom track)
Alignm length: 528
Alignm identity: 381
Alignm E-value: 0
Alignm gaps (pig, cow): 240, 11

Conread position: 32-296
Cow position: chr10:21899258-21898996 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 207
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 117

Conread position: 39-502
Cow position: chr10:10798145-10797674 (view UCSC Genome Browser custom track)
Alignm length: 482
Alignm identity: 313
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 101, 87

Conread position: 39-552
Cow position: chr10:11821704-11822217 (view UCSC Genome Browser custom track)
Alignm length: 530
Alignm identity: 365
Alignm E-value: 0
Alignm gaps (pig, cow): 160, 209

Conread position: 50-552
Cow position: chr10:28256454-28255948 (view UCSC Genome Browser custom track)
Alignm length: 511
Alignm identity: 371
Alignm E-value: 0
Alignm gaps (pig, cow): 226, 142

Conread position: 69-552
Cow position: chr10:22584041-22583545 (view UCSC Genome Browser custom track)
Alignm length: 501
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 123, 370

Conread position: 82-295
Cow position: chr10:39439346-39439569 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 165
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 104, 0

Conread position: 84-438
Cow position: chr10:6243-6582 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 286, 114

Conread position: 84-552
Cow position: chr10:60360890-60361364 (view UCSC Genome Browser custom track)
Alignm length: 483
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 15

Conread position: 86-352
Cow position: chr10:31538788-31539052 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 183
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 128, 102

Conread position: 102-540
Cow position: chr10:53321377-53320937 (view UCSC Genome Browser custom track)
Alignm length: 450
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 168, 46

Conread position: 104-551
Cow position: chr10:20375815-20375371 (view UCSC Genome Browser custom track)
Alignm length: 458
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 42

Conread position: 109-552
Cow position: chr10:36469428-36468995 (view UCSC Genome Browser custom track)
Alignm length: 452
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 69

Conread position: 132-552
Cow position: chr10:62407737-62407309 (view UCSC Genome Browser custom track)
Alignm length: 431
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 139, 61

Conread position: 160-552
Cow position: chr10:55285018-55285427 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 369

Conread position: 162-390
Cow position: chr10:57406838-57406603 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 180
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 37, 13

Conread position: 177-552
Cow position: chr10:39815312-39814930 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 181, 170

Conread position: 188-551
Cow position: chr10:126383-126756 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 166

Conread position: 193-552
Cow position: chr10:21488067-21488426 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 195

Conread position: 194-454
Cow position: chr10:58928341-58928600 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 190
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 54, 41

Conread position: 195-552
Cow position: chr10:29631696-29631330 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 0

Conread position: 208-552
Cow position: chr10:10583233-10583590 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 340

Conread position: 218-551
Cow position: chr10:20382882-20382559 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 21

Conread position: 242-552
Cow position: chr10:54931044-54930738 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 117, 22

Conread position: 252-552
Cow position: chr10:51774045-51773746 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 222
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 21, 179

Conread position: 261-448
Cow position: chr10:8291107-8291299 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 137
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 108, 0

Conread position: 312-552
Cow position: chr10:37771107-37771353 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 187
Alignm E-value: 8.99999e-40
Alignm gaps (pig, cow): 58, 207

Conread position: 332-552
Cow position: chr10:47787930-47788148 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 171
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 30, 60

Conread position: 365-552
Cow position: chr10:68160356-68160169 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 138
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 99, 11

Conread position: 1-171
Cow position: chr11:10091227-10091400 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 141
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 37, 0

Conread position: 1-182
Cow position: chr11:44491684-44491503 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 137
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 37, 77

Conread position: 1-221
Cow position: chr11:71981979-71981745 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 179
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 35, 114

Conread position: 1-284
Cow position: chr11:12094116-12094399 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 73

Conread position: 1-476
Cow position: chr11:37476452-37475950 (view UCSC Genome Browser custom track)
Alignm length: 505
Alignm identity: 363
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 157

Conread position: 1-551
Cow position: chr11:31861449-31862018 (view UCSC Genome Browser custom track)
Alignm length: 578
Alignm identity: 441
Alignm E-value: 0
Alignm gaps (pig, cow): 178, 519

Conread position: 1-552
Cow position: chr11:15535034-15535569 (view UCSC Genome Browser custom track)
Alignm length: 559
Alignm identity: 347
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 197, 5

Conread position: 1-552
Cow position: chr11:24393864-24394423 (view UCSC Genome Browser custom track)
Alignm length: 565
Alignm identity: 423
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 145

Conread position: 1-552
Cow position: chr11:26070510-26069938 (view UCSC Genome Browser custom track)
Alignm length: 585
Alignm identity: 429
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 280

Conread position: 1-552
Cow position: chr11:30123298-30122737 (view UCSC Genome Browser custom track)
Alignm length: 570
Alignm identity: 436
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 238

Conread position: 1-552
Cow position: chr11:47759735-47759172 (view UCSC Genome Browser custom track)
Alignm length: 569
Alignm identity: 445
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 300

Conread position: 2-267
Cow position: chr11:9216532-9216266 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 66

Conread position: 3-213
Cow position: chr11:10052253-10052453 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 155
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 35, 56

Conread position: 3-260
Cow position: chr11:21902544-21902291 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 66

Conread position: 3-356
Cow position: chr11:38219785-38219428 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 173

Conread position: 3-442
Cow position: chr11:49840406-49840853 (view UCSC Genome Browser custom track)
Alignm length: 452
Alignm identity: 286
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 33, 98

Conread position: 3-498
Cow position: chr11:28108687-28109191 (view UCSC Genome Browser custom track)
Alignm length: 507
Alignm identity: 380
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 188

Conread position: 3-536
Cow position: chr11:29232459-29231927 (view UCSC Genome Browser custom track)
Alignm length: 547
Alignm identity: 367
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 69

Conread position: 3-545
Cow position: chr11:31926721-31927251 (view UCSC Genome Browser custom track)
Alignm length: 547
Alignm identity: 385
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 13

Conread position: 3-549
Cow position: chr11:40775461-40774893 (view UCSC Genome Browser custom track)
Alignm length: 572
Alignm identity: 433
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 323

Conread position: 3-551
Cow position: chr11:7110552-7110024 (view UCSC Genome Browser custom track)
Alignm length: 552
Alignm identity: 394
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 26

Conread position: 3-552
Cow position: chr11:9601782-9601219 (view UCSC Genome Browser custom track)
Alignm length: 576
Alignm identity: 419
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 122

Conread position: 3-552
Cow position: chr11:17546713-17547271 (view UCSC Genome Browser custom track)
Alignm length: 562
Alignm identity: 413
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 191

Conread position: 3-552
Cow position: chr11:26564532-26563992 (view UCSC Genome Browser custom track)
Alignm length: 559
Alignm identity: 380
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 31

Conread position: 3-552
Cow position: chr11:28229205-28228660 (view UCSC Genome Browser custom track)
Alignm length: 561
Alignm identity: 405
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 63

Conread position: 3-552
Cow position: chr11:57627508-57626944 (view UCSC Genome Browser custom track)
Alignm length: 565
Alignm identity: 403
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 0

Conread position: 3-552
Cow position: chr11:67451045-67451600 (view UCSC Genome Browser custom track)
Alignm length: 562
Alignm identity: 404
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 47

Conread position: 4-549
Cow position: chr11:53286613-53286065 (view UCSC Genome Browser custom track)
Alignm length: 565
Alignm identity: 391
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 119

Conread position: 5-552
Cow position: chr11:4063313-4062781 (view UCSC Genome Browser custom track)
Alignm length: 553
Alignm identity: 408
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 125

Conread position: 5-552
Cow position: chr11:4269850-4269293 (view UCSC Genome Browser custom track)
Alignm length: 560
Alignm identity: 428
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 191

Conread position: 5-552
Cow position: chr11:9156605-9156043 (view UCSC Genome Browser custom track)
Alignm length: 568
Alignm identity: 427
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 443

Conread position: 5-552
Cow position: chr11:38834883-38834340 (view UCSC Genome Browser custom track)
Alignm length: 561
Alignm identity: 423
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 191

Conread position: 6-523
Cow position: chr11:43514079-43513556 (view UCSC Genome Browser custom track)
Alignm length: 526
Alignm identity: 407
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 190

Conread position: 6-525
Cow position: chr11:4034796-4034271 (view UCSC Genome Browser custom track)
Alignm length: 534
Alignm identity: 396
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 318

Conread position: 6-549
Cow position: chr11:26124373-26123825 (view UCSC Genome Browser custom track)
Alignm length: 555
Alignm identity: 426
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 178

Conread position: 6-550
Cow position: chr11:53431505-53430936 (view UCSC Genome Browser custom track)
Alignm length: 573
Alignm identity: 426
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 482

Conread position: 6-552
Cow position: chr11:11988665-11989241 (view UCSC Genome Browser custom track)
Alignm length: 580
Alignm identity: 439
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 296

Conread position: 6-552
Cow position: chr11:12357863-12357303 (view UCSC Genome Browser custom track)
Alignm length: 563
Alignm identity: 427
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 191

Conread position: 6-552
Cow position: chr11:19101942-19101385 (view UCSC Genome Browser custom track)
Alignm length: 567
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 190

Conread position: 6-552
Cow position: chr11:26548064-26548633 (view UCSC Genome Browser custom track)
Alignm length: 574
Alignm identity: 426
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 237

Conread position: 6-552
Cow position: chr11:28054056-28053534 (view UCSC Genome Browser custom track)
Alignm length: 553
Alignm identity: 396
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 28

Conread position: 6-552
Cow position: chr11:29668054-29667498 (view UCSC Genome Browser custom track)
Alignm length: 560
Alignm identity: 421
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 187

Conread position: 6-552
Cow position: chr11:41170142-41169588 (view UCSC Genome Browser custom track)
Alignm length: 560
Alignm identity: 423
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 186

Conread position: 6-552
Cow position: chr11:44252353-44252911 (view UCSC Genome Browser custom track)
Alignm length: 561
Alignm identity: 416
Alignm E-value: 0
Alignm gaps (pig, cow): 190, 41

Conread position: 6-552
Cow position: chr11:44582782-44582234 (view UCSC Genome Browser custom track)
Alignm length: 559
Alignm identity: 413
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 190

Conread position: 6-552
Cow position: chr11:58134947-58135502 (view UCSC Genome Browser custom track)
Alignm length: 561
Alignm identity: 425
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 386

Conread position: 6-552
Cow position: chr11:71330146-71330703 (view UCSC Genome Browser custom track)
Alignm length: 560
Alignm identity: 423
Alignm E-value: 0
Alignm gaps (pig, cow): 138, 401

Conread position: 6-552
Cow position: chr11:85393258-85392726 (view UCSC Genome Browser custom track)
Alignm length: 555
Alignm identity: 406
Alignm E-value: 0
Alignm gaps (pig, cow): 281, 175

Conread position: 8-387
Cow position: chr11:23127341-23126965 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 13

Conread position: 8-524
Cow position: chr11:44156692-44156170 (view UCSC Genome Browser custom track)
Alignm length: 529
Alignm identity: 399
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 188

Conread position: 8-550
Cow position: chr11:49559113-49558587 (view UCSC Genome Browser custom track)
Alignm length: 556
Alignm identity: 394
Alignm E-value: 0
Alignm gaps (pig, cow): 172, 11

Conread position: 9-551
Cow position: chr11:15943789-15943257 (view UCSC Genome Browser custom track)
Alignm length: 554
Alignm identity: 357
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 23, 169

Conread position: 9-552
Cow position: chr11:10848007-10848560 (view UCSC Genome Browser custom track)
Alignm length: 559
Alignm identity: 429
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 181

Conread position: 31-552
Cow position: chr11:20575802-20575290 (view UCSC Genome Browser custom track)
Alignm length: 532
Alignm identity: 335
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 9, 126

Conread position: 39-294
Cow position: chr11:22935683-22935937 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 232, 149

Conread position: 39-536
Cow position: chr11:3855819-3856304 (view UCSC Genome Browser custom track)
Alignm length: 511
Alignm identity: 378
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 152

Conread position: 39-552
Cow position: chr11:72310445-72309930 (view UCSC Genome Browser custom track)
Alignm length: 522
Alignm identity: 395
Alignm E-value: 0
Alignm gaps (pig, cow): 232, 160

Conread position: 65-550
Cow position: chr11:49553560-49553074 (view UCSC Genome Browser custom track)
Alignm length: 505
Alignm identity: 363
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 180

Conread position: 66-552
Cow position: chr11:74424203-74424704 (view UCSC Genome Browser custom track)
Alignm length: 508
Alignm identity: 379
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 44

Conread position: 81-550
Cow position: chr11:39804370-39804829 (view UCSC Genome Browser custom track)
Alignm length: 473
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 152, 99

Conread position: 84-419
Cow position: chr11:28064729-28065062 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 117, 106

Conread position: 95-552
Cow position: chr11:9975237-9974796 (view UCSC Genome Browser custom track)
Alignm length: 463
Alignm identity: 283
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 49, 35

Conread position: 121-475
Cow position: chr11:81852038-81851694 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 176

Conread position: 135-552
Cow position: chr11:73133970-73134398 (view UCSC Genome Browser custom track)
Alignm length: 429
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 0

Conread position: 147-551
Cow position: chr11:66729792-66730193 (view UCSC Genome Browser custom track)
Alignm length: 408
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 46

Conread position: 147-552
Cow position: chr11:87142285-87142684 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 123, 41

Conread position: 154-552
Cow position: chr11:4026903-4026500 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 117, 34

Conread position: 155-552
Cow position: chr11:23880734-23881139 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 35

Conread position: 164-368
Cow position: chr11:31873904-31873705 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 162
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 35, 10

Conread position: 167-540
Cow position: chr11:32685613-32685985 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 255
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 93, 32

Conread position: 180-552
Cow position: chr11:76373258-76372893 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 116

Conread position: 189-359
Cow position: chr11:27657039-27657213 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 141
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 21, 0

Conread position: 201-324
Cow position: chr11:10056097-10056222 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 103
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 69, 0

Conread position: 223-550
Cow position: chr11:35504432-35504105 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 218
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 153, 40

Conread position: 231-421
Cow position: chr11:44490834-44490647 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 156
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 40, 71

Conread position: 251-552
Cow position: chr11:28391769-28392073 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 221
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 22, 65

Conread position: 273-552
Cow position: chr11:26074141-26073858 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 24

Conread position: 301-552
Cow position: chr11:1495180-1494926 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 187
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 69, 137

Conread position: 324-552
Cow position: chr11:54216385-54216150 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 172
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 46, 189

Conread position: 329-549
Cow position: chr11:26784138-26784361 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 172
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 22, 105

Conread position: 340-552
Cow position: chr11:27657335-27657541 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 164
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 28, 87

Conread position: 368-552
Cow position: chr11:31754454-31754639 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 135
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 61, 54

Conread position: 375-552
Cow position: chr11:31932374-31932554 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 131
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 124, 105

Conread position: 375-552
Cow position: chr11:54484348-54484169 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 128
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 88, 0

Conread position: 1-552
Cow position: chr12:7864033-7863480 (view UCSC Genome Browser custom track)
Alignm length: 564
Alignm identity: 357
Alignm E-value: 8.96831e-44
Alignm gaps (pig, cow): 43, 111

Conread position: 1-552
Cow position: chr12:21942574-21943131 (view UCSC Genome Browser custom track)
Alignm length: 572
Alignm identity: 430
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 32

Conread position: 3-344
Cow position: chr12:25554539-25554180 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 252
Alignm E-value: 8.96831e-44
Alignm gaps (pig, cow): 35, 232

Conread position: 3-452
Cow position: chr12:11203081-11203534 (view UCSC Genome Browser custom track)
Alignm length: 463
Alignm identity: 283
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 33, 56

Conread position: 3-550
Cow position: chr12:37559829-37560405 (view UCSC Genome Browser custom track)
Alignm length: 581
Alignm identity: 413
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 22

Conread position: 3-552
Cow position: chr12:21387405-21386847 (view UCSC Genome Browser custom track)
Alignm length: 561
Alignm identity: 408
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 192

Conread position: 3-552
Cow position: chr12:32654376-32654951 (view UCSC Genome Browser custom track)
Alignm length: 576
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 0

Conread position: 5-529
Cow position: chr12:8677259-8676719 (view UCSC Genome Browser custom track)
Alignm length: 547
Alignm identity: 403
Alignm E-value: 0
Alignm gaps (pig, cow): 176, 124

Conread position: 6-319
Cow position: chr12:14661788-14661471 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 167

Conread position: 6-544
Cow position: chr12:25262626-25262080 (view UCSC Genome Browser custom track)
Alignm length: 551
Alignm identity: 384
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 295

Conread position: 6-552
Cow position: chr12:1403334-1403897 (view UCSC Genome Browser custom track)
Alignm length: 568
Alignm identity: 409
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 190

Conread position: 6-552
Cow position: chr12:6405802-6405239 (view UCSC Genome Browser custom track)
Alignm length: 566
Alignm identity: 426
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 190

Conread position: 6-552
Cow position: chr12:11099076-11099621 (view UCSC Genome Browser custom track)
Alignm length: 565
Alignm identity: 419
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 160

Conread position: 6-552
Cow position: chr12:27855124-27854568 (view UCSC Genome Browser custom track)
Alignm length: 558
Alignm identity: 408
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 189

Conread position: 6-552
Cow position: chr12:27932065-27931514 (view UCSC Genome Browser custom track)
Alignm length: 557
Alignm identity: 421
Alignm E-value: 0
Alignm gaps (pig, cow): 175, 444

Conread position: 9-552
Cow position: chr12:600512-599975 (view UCSC Genome Browser custom track)
Alignm length: 551
Alignm identity: 404
Alignm E-value: 0
Alignm gaps (pig, cow): 187, 142

Conread position: 10-292
Cow position: chr12:22204898-22204613 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 186

Conread position: 10-298
Cow position: chr12:21198806-21199095 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 186

Conread position: 10-552
Cow position: chr12:35345407-35345932 (view UCSC Genome Browser custom track)
Alignm length: 551
Alignm identity: 407
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 19

Conread position: 15-534
Cow position: chr12:28004786-28005270 (view UCSC Genome Browser custom track)
Alignm length: 528
Alignm identity: 368
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 61

Conread position: 39-306
Cow position: chr12:366752-366486 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 177
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 222, 17

Conread position: 50-552
Cow position: chr12:8139223-8138745 (view UCSC Genome Browser custom track)
Alignm length: 510
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 17

Conread position: 60-546
Cow position: chr12:23141298-23140797 (view UCSC Genome Browser custom track)
Alignm length: 502
Alignm identity: 367
Alignm E-value: 0
Alignm gaps (pig, cow): 135, 0

Conread position: 65-350
Cow position: chr12:32678033-32677761 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 199
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 116, 0

Conread position: 69-552
Cow position: chr12:25100166-25099680 (view UCSC Genome Browser custom track)
Alignm length: 493
Alignm identity: 366
Alignm E-value: 0
Alignm gaps (pig, cow): 190, 21

Conread position: 78-537
Cow position: chr12:23162012-23161555 (view UCSC Genome Browser custom track)
Alignm length: 468
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 154, 96

Conread position: 100-525
Cow position: chr12:41465552-41465130 (view UCSC Genome Browser custom track)
Alignm length: 433
Alignm identity: 275
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 158, 56

Conread position: 108-298
Cow position: chr12:19221936-19222126 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 130
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 162, 71

Conread position: 167-552
Cow position: chr12:48471872-48471487 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 23

Conread position: 170-532
Cow position: chr12:1776958-1776595 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 37

Conread position: 193-552
Cow position: chr12:33119181-33119568 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 163

Conread position: 194-454
Cow position: chr12:1870336-1870595 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 190
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 54, 41

Conread position: 213-466
Cow position: chr12:35313343-35313089 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 85

Conread position: 216-552
Cow position: chr12:20604198-20604532 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 225
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 150, 23

Conread position: 218-551
Cow position: chr12:35109745-35110070 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 225
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 50, 35

Conread position: 263-552
Cow position: chr12:1888461-1888164 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 213
Alignm E-value: 8.96831e-44
Alignm gaps (pig, cow): 13, 184

Conread position: 268-519
Cow position: chr12:15036670-15036420 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 188
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 19, 34

Conread position: 270-552
Cow position: chr12:20843724-20843999 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 219
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 28, 34

Conread position: 393-544
Cow position: chr12:24433850-24433697 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 127
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 68, 0

Conread position: 1-175
Cow position: chr13:30238854-30239030 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 145
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 41, 70

Conread position: 1-290
Cow position: chr13:20541428-20541145 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 58

Conread position: 1-322
Cow position: chr13:26844645-26844951 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 216, 122

Conread position: 1-373
Cow position: chr13:34154144-34153767 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 192

Conread position: 1-472
Cow position: chr13:34324943-34324460 (view UCSC Genome Browser custom track)
Alignm length: 484
Alignm identity: 365
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 0

Conread position: 1-552
Cow position: chr13:5625389-5624818 (view UCSC Genome Browser custom track)
Alignm length: 581
Alignm identity: 440
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 457

Conread position: 1-552
Cow position: chr13:15450509-15449965 (view UCSC Genome Browser custom track)
Alignm length: 572
Alignm identity: 437
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 129

Conread position: 1-552
Cow position: chr13:30654764-30654219 (view UCSC Genome Browser custom track)
Alignm length: 560
Alignm identity: 417
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 191

Conread position: 1-552
Cow position: chr13:34938081-34938619 (view UCSC Genome Browser custom track)
Alignm length: 559
Alignm identity: 426
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 190

Conread position: 3-344
Cow position: chr13:34424380-34424724 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 181

Conread position: 3-365
Cow position: chr13:30278238-30278596 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 251
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 39, 81

Conread position: 3-411
Cow position: chr13:16254765-16254351 (view UCSC Genome Browser custom track)
Alignm length: 416
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 179

Conread position: 3-413
Cow position: chr13:60466945-60467363 (view UCSC Genome Browser custom track)
Alignm length: 420
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 192

Conread position: 3-523
Cow position: chr13:5628189-5627698 (view UCSC Genome Browser custom track)
Alignm length: 524
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 23

Conread position: 3-538
Cow position: chr13:17309091-17309632 (view UCSC Genome Browser custom track)
Alignm length: 548
Alignm identity: 391
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 192

Conread position: 3-551
Cow position: chr13:57024317-57024863 (view UCSC Genome Browser custom track)
Alignm length: 561
Alignm identity: 394
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 109

Conread position: 3-552
Cow position: chr13:14178219-14177674 (view UCSC Genome Browser custom track)
Alignm length: 561
Alignm identity: 388
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 23

Conread position: 3-552
Cow position: chr13:25692303-25692847 (view UCSC Genome Browser custom track)
Alignm length: 561
Alignm identity: 411
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 114

Conread position: 3-552
Cow position: chr13:47229386-47228822 (view UCSC Genome Browser custom track)
Alignm length: 566
Alignm identity: 417
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 400

Conread position: 4-537
Cow position: chr13:11798091-11797562 (view UCSC Genome Browser custom track)
Alignm length: 545
Alignm identity: 414
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 126

Conread position: 5-547
Cow position: chr13:1592531-1591988 (view UCSC Genome Browser custom track)
Alignm length: 553
Alignm identity: 397
Alignm E-value: 0
Alignm gaps (pig, cow): 266, 188

Conread position: 5-552
Cow position: chr13:21839579-21839018 (view UCSC Genome Browser custom track)
Alignm length: 567
Alignm identity: 402
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 187

Conread position: 5-552
Cow position: chr13:35757893-35758461 (view UCSC Genome Browser custom track)
Alignm length: 571
Alignm identity: 442
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 348

Conread position: 6-322
Cow position: chr13:34765832-34765519 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 106

Conread position: 6-543
Cow position: chr13:43982475-43981943 (view UCSC Genome Browser custom track)
Alignm length: 547
Alignm identity: 401
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 260

Conread position: 6-546
Cow position: chr13:31730253-31729724 (view UCSC Genome Browser custom track)
Alignm length: 553
Alignm identity: 402
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 91

Conread position: 6-546
Cow position: chr13:34049360-34049906 (view UCSC Genome Browser custom track)
Alignm length: 557
Alignm identity: 380
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 25

Conread position: 6-552
Cow position: chr13:6667511-6666958 (view UCSC Genome Browser custom track)
Alignm length: 559
Alignm identity: 400
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 53

Conread position: 6-552
Cow position: chr13:13900490-13901043 (view UCSC Genome Browser custom track)
Alignm length: 558
Alignm identity: 410
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 178

Conread position: 6-552
Cow position: chr13:31611685-31611133 (view UCSC Genome Browser custom track)
Alignm length: 562
Alignm identity: 426
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 178

Conread position: 6-552
Cow position: chr13:34041712-34041159 (view UCSC Genome Browser custom track)
Alignm length: 560
Alignm identity: 428
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 113

Conread position: 9-547
Cow position: chr13:30303908-30304468 (view UCSC Genome Browser custom track)
Alignm length: 567
Alignm identity: 417
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 252

Conread position: 9-552
Cow position: chr13:4484422-4484967 (view UCSC Genome Browser custom track)
Alignm length: 549
Alignm identity: 411
Alignm E-value: 0
Alignm gaps (pig, cow): 187, 53

Conread position: 10-549
Cow position: chr13:3653694-3653141 (view UCSC Genome Browser custom track)
Alignm length: 556
Alignm identity: 419
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 186

Conread position: 10-552
Cow position: chr13:15519881-15519350 (view UCSC Genome Browser custom track)
Alignm length: 555
Alignm identity: 408
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 186

Conread position: 10-552
Cow position: chr13:15923754-15923204 (view UCSC Genome Browser custom track)
Alignm length: 556
Alignm identity: 423
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 186

Conread position: 21-552
Cow position: chr13:9045408-9045939 (view UCSC Genome Browser custom track)
Alignm length: 542
Alignm identity: 421
Alignm E-value: 0
Alignm gaps (pig, cow): 175, 168

Conread position: 53-552
Cow position: chr13:14402426-14401931 (view UCSC Genome Browser custom track)
Alignm length: 507
Alignm identity: 383
Alignm E-value: 0
Alignm gaps (pig, cow): 207, 140

Conread position: 56-552
Cow position: chr13:43590006-43590499 (view UCSC Genome Browser custom track)
Alignm length: 503
Alignm identity: 405
Alignm E-value: 0
Alignm gaps (pig, cow): 215, 137

Conread position: 87-298
Cow position: chr13:47861533-47861743 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 160
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 181, 7

Conread position: 140-552
Cow position: chr13:23002253-23001833 (view UCSC Genome Browser custom track)
Alignm length: 427
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 103

Conread position: 161-552
Cow position: chr13:11794261-11793906 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 277
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 69, 9

Conread position: 169-552
Cow position: chr13:678537-678926 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 200, 23

Conread position: 184-552
Cow position: chr13:30239125-30239490 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 9

Conread position: 189-552
Cow position: chr13:48358450-48358809 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 107

Conread position: 235-552
Cow position: chr13:34030473-34030782 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 226
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 36, 98

Conread position: 244-552
Cow position: chr13:17998418-17998734 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 0

Conread position: 317-552
Cow position: chr13:5501058-5500823 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 169
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 146, 12

Conread position: 406-552
Cow position: chr13:34764800-34764656 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 111
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 59, 77

Conread position: 1-184
Cow position: chr14:13462079-13462258 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 145
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 39, 27

Conread position: 1-223
Cow position: chr14:35385580-35385357 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 173
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 43, 177

Conread position: 1-234
Cow position: chr14:29775726-29775488 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 182
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 0

Conread position: 1-352
Cow position: chr14:21586689-21587030 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 221
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 201, 17

Conread position: 1-367
Cow position: chr14:44378293-44378658 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 208, 38

Conread position: 1-371
Cow position: chr14:11561540-11561160 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 205

Conread position: 1-411
Cow position: chr14:38530967-38530549 (view UCSC Genome Browser custom track)
Alignm length: 423
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 194

Conread position: 1-552
Cow position: chr14:17760387-17759837 (view UCSC Genome Browser custom track)
Alignm length: 564
Alignm identity: 429
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 174

Conread position: 1-552
Cow position: chr14:21128165-21128703 (view UCSC Genome Browser custom track)
Alignm length: 559
Alignm identity: 366
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 19

Conread position: 1-552
Cow position: chr14:29580665-29581214 (view UCSC Genome Browser custom track)
Alignm length: 566
Alignm identity: 382
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 79

Conread position: 1-552
Cow position: chr14:44226890-44227427 (view UCSC Genome Browser custom track)
Alignm length: 563
Alignm identity: 407
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 166

Conread position: 1-552
Cow position: chr14:45711223-45710678 (view UCSC Genome Browser custom track)
Alignm length: 561
Alignm identity: 427
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 56

Conread position: 2-542
Cow position: chr14:48825774-48826322 (view UCSC Genome Browser custom track)
Alignm length: 556
Alignm identity: 416
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 194

Conread position: 2-552
Cow position: chr14:40341543-40342111 (view UCSC Genome Browser custom track)
Alignm length: 573
Alignm identity: 437
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 404

Conread position: 3-321
Cow position: chr14:23257847-23258170 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 243

Conread position: 3-416
Cow position: chr14:37413251-37412835 (view UCSC Genome Browser custom track)
Alignm length: 422
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 120

Conread position: 3-438
Cow position: chr14:44676610-44677043 (view UCSC Genome Browser custom track)
Alignm length: 444
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 23

Conread position: 3-524
Cow position: chr14:45206816-45207319 (view UCSC Genome Browser custom track)
Alignm length: 531
Alignm identity: 376
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 111

Conread position: 3-542
Cow position: chr14:29047193-29046643 (view UCSC Genome Browser custom track)
Alignm length: 553
Alignm identity: 406
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 114

Conread position: 3-550
Cow position: chr14:46392039-46391489 (view UCSC Genome Browser custom track)
Alignm length: 560
Alignm identity: 407
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 114

Conread position: 3-552
Cow position: chr14:9046068-9046629 (view UCSC Genome Browser custom track)
Alignm length: 562
Alignm identity: 403
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 0

Conread position: 3-552
Cow position: chr14:17490966-17490407 (view UCSC Genome Browser custom track)
Alignm length: 571
Alignm identity: 396
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 274

Conread position: 3-552
Cow position: chr14:33677556-33678114 (view UCSC Genome Browser custom track)
Alignm length: 566
Alignm identity: 437
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 337

Conread position: 3-552
Cow position: chr14:38147501-38148049 (view UCSC Genome Browser custom track)
Alignm length: 561
Alignm identity: 404
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 189

Conread position: 3-552
Cow position: chr14:40169220-40168685 (view UCSC Genome Browser custom track)
Alignm length: 557
Alignm identity: 398
Alignm E-value: 0
Alignm gaps (pig, cow): 181, 39

Conread position: 3-552
Cow position: chr14:44775543-44774990 (view UCSC Genome Browser custom track)
Alignm length: 561
Alignm identity: 414
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 54

Conread position: 3-552
Cow position: chr14:45671554-45670985 (view UCSC Genome Browser custom track)
Alignm length: 571
Alignm identity: 410
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 192

Conread position: 3-552
Cow position: chr14:50139057-50139615 (view UCSC Genome Browser custom track)
Alignm length: 566
Alignm identity: 407
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 30

Conread position: 5-324
Cow position: chr14:37455563-37455249 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 75

Conread position: 5-485
Cow position: chr14:33402183-33402665 (view UCSC Genome Browser custom track)
Alignm length: 493
Alignm identity: 365
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 24

Conread position: 5-541
Cow position: chr14:13620656-13620102 (view UCSC Genome Browser custom track)
Alignm length: 557
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 536

Conread position: 5-552
Cow position: chr14:17000564-17000006 (view UCSC Genome Browser custom track)
Alignm length: 561
Alignm identity: 427
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 191

Conread position: 6-319
Cow position: chr14:15275732-15275421 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 265, 15

Conread position: 6-319
Cow position: chr14:17685895-17686211 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 185

Conread position: 6-324
Cow position: chr14:190463-190784 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 191

Conread position: 6-478
Cow position: chr14:32447292-32447762 (view UCSC Genome Browser custom track)
Alignm length: 479
Alignm identity: 365
Alignm E-value: 0
Alignm gaps (pig, cow): 265, 175

Conread position: 6-535
Cow position: chr14:12742571-12742036 (view UCSC Genome Browser custom track)
Alignm length: 541
Alignm identity: 400
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 184

Conread position: 6-552
Cow position: chr14:5529564-5530108 (view UCSC Genome Browser custom track)
Alignm length: 568
Alignm identity: 426
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 286

Conread position: 6-552
Cow position: chr14:7472853-7473402 (view UCSC Genome Browser custom track)
Alignm length: 564
Alignm identity: 415
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 231

Conread position: 6-552
Cow position: chr14:11153661-11153099 (view UCSC Genome Browser custom track)
Alignm length: 565
Alignm identity: 432
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 189

Conread position: 6-552
Cow position: chr14:13274099-13274656 (view UCSC Genome Browser custom track)
Alignm length: 566
Alignm identity: 411
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 72

Conread position: 6-552
Cow position: chr14:16272800-16272245 (view UCSC Genome Browser custom track)
Alignm length: 564
Alignm identity: 431
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 154

Conread position: 6-552
Cow position: chr14:19327773-19327212 (view UCSC Genome Browser custom track)
Alignm length: 566
Alignm identity: 425
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 320

Conread position: 6-552
Cow position: chr14:20782958-20783518 (view UCSC Genome Browser custom track)
Alignm length: 575
Alignm identity: 415
Alignm E-value: 0
Alignm gaps (pig, cow): 184, 168

Conread position: 6-552
Cow position: chr14:43558734-43559286 (view UCSC Genome Browser custom track)
Alignm length: 558
Alignm identity: 424
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 115

Conread position: 6-552
Cow position: chr14:44689551-44690122 (view UCSC Genome Browser custom track)
Alignm length: 573
Alignm identity: 412
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 525

Conread position: 6-552
Cow position: chr14:45081546-45082106 (view UCSC Genome Browser custom track)
Alignm length: 562
Alignm identity: 406
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 514

Conread position: 6-552
Cow position: chr14:48253815-48253264 (view UCSC Genome Browser custom track)
Alignm length: 561
Alignm identity: 413
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 67

Conread position: 8-489
Cow position: chr14:44581853-44582354 (view UCSC Genome Browser custom track)
Alignm length: 505
Alignm identity: 355
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 248

Conread position: 8-552
Cow position: chr14:5074466-5075003 (view UCSC Genome Browser custom track)
Alignm length: 556
Alignm identity: 386
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 94

Conread position: 9-319
Cow position: chr14:33237526-33237832 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 66

Conread position: 9-516
Cow position: chr14:37224690-37225206 (view UCSC Genome Browser custom track)
Alignm length: 519
Alignm identity: 396
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 187

Conread position: 9-527
Cow position: chr14:12899595-12900120 (view UCSC Genome Browser custom track)
Alignm length: 531
Alignm identity: 390
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 12

Conread position: 9-552
Cow position: chr14:50111291-50111852 (view UCSC Genome Browser custom track)
Alignm length: 564
Alignm identity: 411
Alignm E-value: 0
Alignm gaps (pig, cow): 171, 259

Conread position: 10-552
Cow position: chr14:13779439-13780002 (view UCSC Genome Browser custom track)
Alignm length: 567
Alignm identity: 416
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 173

Conread position: 10-552
Cow position: chr14:22030940-22030395 (view UCSC Genome Browser custom track)
Alignm length: 554
Alignm identity: 415
Alignm E-value: 0
Alignm gaps (pig, cow): 186, 19

Conread position: 11-552
Cow position: chr14:13863596-13863046 (view UCSC Genome Browser custom track)
Alignm length: 560
Alignm identity: 421
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 300

Conread position: 11-552
Cow position: chr14:33797994-33798529 (view UCSC Genome Browser custom track)
Alignm length: 556
Alignm identity: 352
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 20, 10

Conread position: 12-552
Cow position: chr14:16919212-16918667 (view UCSC Genome Browser custom track)
Alignm length: 549
Alignm identity: 414
Alignm E-value: 0
Alignm gaps (pig, cow): 259, 181

Conread position: 30-238
Cow position: chr14:48404449-48404240 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 148
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 8, 0

Conread position: 39-550
Cow position: chr14:30595835-30595306 (view UCSC Genome Browser custom track)
Alignm length: 536
Alignm identity: 385
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 116

Conread position: 42-263
Cow position: chr14:44131419-44131640 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 168
Alignm E-value: 8.99634e-43
Alignm gaps (pig, cow): 157, 138

Conread position: 53-552
Cow position: chr14:30666048-30666527 (view UCSC Genome Browser custom track)
Alignm length: 509
Alignm identity: 358
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 12

Conread position: 60-516
Cow position: chr14:48601788-48601324 (view UCSC Genome Browser custom track)
Alignm length: 469
Alignm identity: 357
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 272

Conread position: 65-550
Cow position: chr14:45028432-45027957 (view UCSC Genome Browser custom track)
Alignm length: 494
Alignm identity: 369
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 22

Conread position: 74-552
Cow position: chr14:24997017-24996543 (view UCSC Genome Browser custom track)
Alignm length: 488
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 115

Conread position: 88-551
Cow position: chr14:37984168-37984632 (view UCSC Genome Browser custom track)
Alignm length: 474
Alignm identity: 304
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 222, 86

Conread position: 129-552
Cow position: chr14:13303593-13304003 (view UCSC Genome Browser custom track)
Alignm length: 432
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 142, 64

Conread position: 155-549
Cow position: chr14:44256100-44255710 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 34

Conread position: 156-349
Cow position: chr14:44286025-44285827 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 141
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 50, 18

Conread position: 162-552
Cow position: chr14:1659110-1659506 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 114, 30

Conread position: 179-546
Cow position: chr14:12340974-12340605 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 240
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 91, 131

Conread position: 179-552
Cow position: chr14:46466365-46466718 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 60

Conread position: 183-491
Cow position: chr14:16343145-16342837 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 186
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 13, 94

Conread position: 190-352
Cow position: chr14:25366113-25365944 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 122
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 14, 0

Conread position: 191-368
Cow position: chr14:46657611-46657788 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 130
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 6, 96

Conread position: 214-552
Cow position: chr14:44552559-44552889 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 14

Conread position: 230-552
Cow position: chr14:13462243-13462572 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 45

Conread position: 235-552
Cow position: chr14:30735896-30736221 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 117

Conread position: 237-523
Cow position: chr14:29775352-29775054 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 5

Conread position: 251-552
Cow position: chr14:12124441-12124132 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 0

Conread position: 283-552
Cow position: chr14:20910437-20910698 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 190
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 86, 147

Conread position: 301-517
Cow position: chr14:2951766-2951546 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 151
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 69, 0

Conread position: 311-552
Cow position: chr14:23256551-23256313 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 174
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 59, 124

Conread position: 315-550
Cow position: chr14:37455105-37454881 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 175
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 55, 83

Conread position: 321-552
Cow position: chr14:13579207-13579434 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 184
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 48, 116

Conread position: 328-552
Cow position: chr14:190865-191096 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 178
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 42, 189

Conread position: 415-552
Cow position: chr14:47643212-47643343 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 108
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 55, 97

Conread position: 1-135
Cow position: chr15:1300312-1300177 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 114
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 35, 123

Conread position: 1-247
Cow position: chr15:32204110-32204347 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 192
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 37, 124

Conread position: 1-360
Cow position: chr15:2017062-2017416 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 123

Conread position: 1-514
Cow position: chr15:32720248-32719718 (view UCSC Genome Browser custom track)
Alignm length: 533
Alignm identity: 403
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 9

Conread position: 1-528
Cow position: chr15:35736282-35736813 (view UCSC Genome Browser custom track)
Alignm length: 542
Alignm identity: 399
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 192

Conread position: 1-552
Cow position: chr15:2925805-2926361 (view UCSC Genome Browser custom track)
Alignm length: 563
Alignm identity: 419
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 160

Conread position: 1-552
Cow position: chr15:4678781-4679313 (view UCSC Genome Browser custom track)
Alignm length: 564
Alignm identity: 414
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 15

Conread position: 1-552
Cow position: chr15:5980841-5981398 (view UCSC Genome Browser custom track)
Alignm length: 566
Alignm identity: 435
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 173

Conread position: 1-552
Cow position: chr15:6079247-6079794 (view UCSC Genome Browser custom track)
Alignm length: 558
Alignm identity: 426
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 154

Conread position: 1-552
Cow position: chr15:35647174-35646626 (view UCSC Genome Browser custom track)
Alignm length: 565
Alignm identity: 430
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 30

Conread position: 1-552
Cow position: chr15:36625777-36625222 (view UCSC Genome Browser custom track)
Alignm length: 572
Alignm identity: 427
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 16

Conread position: 2-544
Cow position: chr15:4962128-4962673 (view UCSC Genome Browser custom track)
Alignm length: 554
Alignm identity: 413
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 280

Conread position: 2-552
Cow position: chr15:51675211-51675766 (view UCSC Genome Browser custom track)
Alignm length: 570
Alignm identity: 426
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 192

Conread position: 3-188
Cow position: chr15:8057792-8057970 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 135
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 79, 0

Conread position: 3-235
Cow position: chr15:1658221-1657998 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 166
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 42, 23

Conread position: 3-240
Cow position: chr15:1668221-1668449 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 169
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 42, 23

Conread position: 3-454
Cow position: chr15:37457132-37457572 (view UCSC Genome Browser custom track)
Alignm length: 457
Alignm identity: 301
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 21, 15

Conread position: 3-503
Cow position: chr15:4142323-4141815 (view UCSC Genome Browser custom track)
Alignm length: 511
Alignm identity: 361
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 192

Conread position: 3-549
Cow position: chr15:1238174-1238731 (view UCSC Genome Browser custom track)
Alignm length: 572
Alignm identity: 414
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 73

Conread position: 3-549
Cow position: chr15:7545359-7545897 (view UCSC Genome Browser custom track)
Alignm length: 557
Alignm identity: 405
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 47

Conread position: 3-551
Cow position: chr15:4813095-4813649 (view UCSC Genome Browser custom track)
Alignm length: 561
Alignm identity: 388
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 13

Conread position: 3-552
Cow position: chr15:579931-580477 (view UCSC Genome Browser custom track)
Alignm length: 563
Alignm identity: 403
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 115

Conread position: 3-552
Cow position: chr15:3009358-3008790 (view UCSC Genome Browser custom track)
Alignm length: 572
Alignm identity: 408
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 165

Conread position: 3-552
Cow position: chr15:4671929-4672482 (view UCSC Genome Browser custom track)
Alignm length: 565
Alignm identity: 421
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 312

Conread position: 3-552
Cow position: chr15:21450158-21450734 (view UCSC Genome Browser custom track)
Alignm length: 581
Alignm identity: 429
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 80

Conread position: 3-552
Cow position: chr15:50123447-50122883 (view UCSC Genome Browser custom track)
Alignm length: 569
Alignm identity: 404
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 13

Conread position: 4-551
Cow position: chr15:36668243-36668769 (view UCSC Genome Browser custom track)
Alignm length: 555
Alignm identity: 414
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 193

Conread position: 4-552
Cow position: chr15:1764823-1765371 (view UCSC Genome Browser custom track)
Alignm length: 573
Alignm identity: 414
Alignm E-value: 0
Alignm gaps (pig, cow): 310, 35

Conread position: 5-550
Cow position: chr15:32711722-32712270 (view UCSC Genome Browser custom track)
Alignm length: 556
Alignm identity: 401
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 129

Conread position: 5-552
Cow position: chr15:9430440-9430985 (view UCSC Genome Browser custom track)
Alignm length: 566
Alignm identity: 403
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 29

Conread position: 5-552
Cow position: chr15:18577208-18577766 (view UCSC Genome Browser custom track)
Alignm length: 561
Alignm identity: 430
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 188

Conread position: 6-188
Cow position: chr15:44829299-44829484 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 142
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 32, 0

Conread position: 6-199
Cow position: chr15:32493886-32493693 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 155
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 190, 175

Conread position: 6-319
Cow position: chr15:44070426-44070742 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 147

Conread position: 6-322
Cow position: chr15:2901974-2901651 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 184, 75

Conread position: 6-413
Cow position: chr15:8811526-8811110 (view UCSC Genome Browser custom track)
Alignm length: 419
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 108

Conread position: 6-441
Cow position: chr15:524361-523929 (view UCSC Genome Browser custom track)
Alignm length: 444
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 190

Conread position: 6-488
Cow position: chr15:315358-314843 (view UCSC Genome Browser custom track)
Alignm length: 521
Alignm identity: 363
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 167

Conread position: 6-546
Cow position: chr15:4651855-4652415 (view UCSC Genome Browser custom track)
Alignm length: 569
Alignm identity: 409
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 23

Conread position: 6-551
Cow position: chr15:3260820-3260273 (view UCSC Genome Browser custom track)
Alignm length: 558
Alignm identity: 410
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 184

Conread position: 6-551
Cow position: chr15:18332331-18331785 (view UCSC Genome Browser custom track)
Alignm length: 555
Alignm identity: 411
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 190

Conread position: 6-552
Cow position: chr15:4386258-4386804 (view UCSC Genome Browser custom track)
Alignm length: 559
Alignm identity: 425
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 189

Conread position: 6-552
Cow position: chr15:4765675-4766240 (view UCSC Genome Browser custom track)
Alignm length: 569
Alignm identity: 401
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 296

Conread position: 6-552
Cow position: chr15:6155445-6154878 (view UCSC Genome Browser custom track)
Alignm length: 571
Alignm identity: 430
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 190

Conread position: 6-552
Cow position: chr15:6553323-6552767 (view UCSC Genome Browser custom track)
Alignm length: 571
Alignm identity: 412
Alignm E-value: 0
Alignm gaps (pig, cow): 184, 23

Conread position: 6-552
Cow position: chr15:7837748-7838317 (view UCSC Genome Browser custom track)
Alignm length: 572
Alignm identity: 422
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 294

Conread position: 6-552
Cow position: chr15:14581862-14581312 (view UCSC Genome Browser custom track)
Alignm length: 559
Alignm identity: 414
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 190

Conread position: 6-552
Cow position: chr15:15346616-15346059 (view UCSC Genome Browser custom track)
Alignm length: 560
Alignm identity: 432
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 300

Conread position: 6-552
Cow position: chr15:17148626-17149172 (view UCSC Genome Browser custom track)
Alignm length: 564
Alignm identity: 391
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 122

Conread position: 6-552
Cow position: chr15:17293575-17294096 (view UCSC Genome Browser custom track)
Alignm length: 559
Alignm identity: 390
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 88

Conread position: 6-552
Cow position: chr15:21665248-21664690 (view UCSC Genome Browser custom track)
Alignm length: 560
Alignm identity: 426
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 513

Conread position: 6-552
Cow position: chr15:24295596-24296139 (view UCSC Genome Browser custom track)
Alignm length: 559
Alignm identity: 412
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 190

Conread position: 8-552
Cow position: chr15:2077158-2077712 (view UCSC Genome Browser custom track)
Alignm length: 560
Alignm identity: 426
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 188

Conread position: 9-295
Cow position: chr15:9913194-9913488 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 0

Conread position: 9-356
Cow position: chr15:32694065-32694412 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 125

Conread position: 9-552
Cow position: chr15:4922649-4923194 (view UCSC Genome Browser custom track)
Alignm length: 556
Alignm identity: 414
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 188

Conread position: 10-306
Cow position: chr15:6471428-6471127 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 139

Conread position: 10-552
Cow position: chr15:19737547-19737007 (view UCSC Genome Browser custom track)
Alignm length: 552
Alignm identity: 421
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 183

Conread position: 11-410
Cow position: chr15:6592115-6591707 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 175

Conread position: 11-552
Cow position: chr15:35752815-35752257 (view UCSC Genome Browser custom track)
Alignm length: 562
Alignm identity: 421
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 185

Conread position: 21-268
Cow position: chr15:2012851-2013108 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 193
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 17, 139

Conread position: 21-323
Cow position: chr15:7893006-7892724 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 221
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 12, 64

Conread position: 30-549
Cow position: chr15:32480063-32479559 (view UCSC Genome Browser custom track)
Alignm length: 528
Alignm identity: 348
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 56

Conread position: 31-552
Cow position: chr15:31359403-31359919 (view UCSC Genome Browser custom track)
Alignm length: 530
Alignm identity: 405
Alignm E-value: 0
Alignm gaps (pig, cow): 159, 264

Conread position: 37-488
Cow position: chr15:6386810-6386355 (view UCSC Genome Browser custom track)
Alignm length: 460
Alignm identity: 345
Alignm E-value: 0
Alignm gaps (pig, cow): 162, 36

Conread position: 39-456
Cow position: chr15:16595364-16595786 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 331, 154

Conread position: 39-552
Cow position: chr15:6485121-6485628 (view UCSC Genome Browser custom track)
Alignm length: 522
Alignm identity: 389
Alignm E-value: 0
Alignm gaps (pig, cow): 160, 115

Conread position: 39-552
Cow position: chr15:7234796-7235304 (view UCSC Genome Browser custom track)
Alignm length: 530
Alignm identity: 399
Alignm E-value: 0
Alignm gaps (pig, cow): 151, 24

Conread position: 39-552
Cow position: chr15:53409451-53409966 (view UCSC Genome Browser custom track)
Alignm length: 524
Alignm identity: 386
Alignm E-value: 0
Alignm gaps (pig, cow): 140, 116

Conread position: 68-552
Cow position: chr15:48284255-48284748 (view UCSC Genome Browser custom track)
Alignm length: 501
Alignm identity: 319
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 125, 106

Conread position: 72-368
Cow position: chr15:12420860-12420563 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 199, 0

Conread position: 88-515
Cow position: chr15:6383596-6383153 (view UCSC Genome Browser custom track)
Alignm length: 444
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 0

Conread position: 91-424
Cow position: chr15:36392553-36392230 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 181, 98

Conread position: 95-552
Cow position: chr15:58240-58707 (view UCSC Genome Browser custom track)
Alignm length: 475
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 23

Conread position: 103-552
Cow position: chr15:4915794-4916228 (view UCSC Genome Browser custom track)
Alignm length: 456
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 270, 51

Conread position: 107-552
Cow position: chr15:4950666-4951110 (view UCSC Genome Browser custom track)
Alignm length: 457
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 154, 227

Conread position: 111-552
Cow position: chr15:2588847-2588400 (view UCSC Genome Browser custom track)
Alignm length: 454
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 156

Conread position: 131-552
Cow position: chr15:1299935-1299499 (view UCSC Genome Browser custom track)
Alignm length: 440
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 59

Conread position: 156-539
Cow position: chr15:24717986-24718370 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 33

Conread position: 156-552
Cow position: chr15:41357818-41358212 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 237

Conread position: 171-541
Cow position: chr15:6368140-6367772 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 141, 28

Conread position: 171-552
Cow position: chr15:53299147-53299516 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 40

Conread position: 194-516
Cow position: chr15:32493189-32492863 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 255

Conread position: 205-552
Cow position: chr15:8058657-8059018 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 240
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 67, 0

Conread position: 248-552
Cow position: chr15:2013307-2013607 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 227
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 28, 53

Conread position: 260-552
Cow position: chr15:24794577-24794873 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 22

Conread position: 273-551
Cow position: chr15:9912462-9912184 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 112

Conread position: 286-552
Cow position: chr15:3182285-3182019 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 183
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 33, 15

Conread position: 295-551
Cow position: chr15:611514-611248 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 223

Conread position: 306-552
Cow position: chr15:44071388-44071649 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 193
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 10, 215

Conread position: 320-552
Cow position: chr15:2901451-2901213 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 174
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 51, 134

Conread position: 332-552
Cow position: chr15:329155-329385 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 173
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 38, 184

Conread position: 340-552
Cow position: chr15:7938282-7938497 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 173
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 30, 130

Conread position: 356-552
Cow position: chr15:20411451-20411646 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 152
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 107, 5

Conread position: 405-552
Cow position: chr15:20361187-20361041 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 119
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 123, 55

Conread position: 1-117
Cow position: chr16:49221782-49221663 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 94
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 42, 0

Conread position: 1-501
Cow position: chr16:42736242-42735745 (view UCSC Genome Browser custom track)
Alignm length: 518
Alignm identity: 384
Alignm E-value: 0
Alignm gaps (pig, cow): 187, 29

Conread position: 1-551
Cow position: chr16:1567302-1566748 (view UCSC Genome Browser custom track)
Alignm length: 564
Alignm identity: 425
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 96

Conread position: 1-551
Cow position: chr16:51084289-51084860 (view UCSC Genome Browser custom track)
Alignm length: 578
Alignm identity: 413
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 275

Conread position: 1-552
Cow position: chr16:1860372-1860940 (view UCSC Genome Browser custom track)
Alignm length: 577
Alignm identity: 427
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 145

Conread position: 1-552
Cow position: chr16:25085767-25086324 (view UCSC Genome Browser custom track)
Alignm length: 568
Alignm identity: 426
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 23

Conread position: 2-169
Cow position: chr16:20202067-20202237 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 137
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 36, 0

Conread position: 2-499
Cow position: chr16:29034202-29034702 (view UCSC Genome Browser custom track)
Alignm length: 515
Alignm identity: 397
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 27

Conread position: 3-168
Cow position: chr16:30049640-30049805 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 127
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 35, 119

Conread position: 3-205
Cow position: chr16:25258098-25258308 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 165
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 37, 187

Conread position: 3-294
Cow position: chr16:26651380-26651673 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 213
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 39, 116

Conread position: 3-538
Cow position: chr16:25188800-25189344 (view UCSC Genome Browser custom track)
Alignm length: 546
Alignm identity: 394
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 192

Conread position: 3-546
Cow position: chr16:16270988-16270430 (view UCSC Genome Browser custom track)
Alignm length: 563
Alignm identity: 429
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 190

Conread position: 3-551
Cow position: chr16:37455860-37455306 (view UCSC Genome Browser custom track)
Alignm length: 574
Alignm identity: 409
Alignm E-value: 0
Alignm gaps (pig, cow): 267, 16

Conread position: 3-552
Cow position: chr16:337319-337892 (view UCSC Genome Browser custom track)
Alignm length: 579
Alignm identity: 415
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 142

Conread position: 3-552
Cow position: chr16:9209122-9209663 (view UCSC Genome Browser custom track)
Alignm length: 564
Alignm identity: 377
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 122

Conread position: 3-552
Cow position: chr16:10375448-10374890 (view UCSC Genome Browser custom track)
Alignm length: 562
Alignm identity: 399
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 192

Conread position: 3-552
Cow position: chr16:23670849-23671412 (view UCSC Genome Browser custom track)
Alignm length: 571
Alignm identity: 427
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 144

Conread position: 3-552
Cow position: chr16:27714643-27714113 (view UCSC Genome Browser custom track)
Alignm length: 558
Alignm identity: 397
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 128

Conread position: 3-552
Cow position: chr16:28170219-28169644 (view UCSC Genome Browser custom track)
Alignm length: 577
Alignm identity: 416
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 365

Conread position: 4-321
Cow position: chr16:51405798-51405482 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 180

Conread position: 5-552
Cow position: chr16:1432341-1432895 (view UCSC Genome Browser custom track)
Alignm length: 561
Alignm identity: 413
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 179

Conread position: 6-424
Cow position: chr16:15493658-15494084 (view UCSC Genome Browser custom track)
Alignm length: 428
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 196

Conread position: 6-437
Cow position: chr16:2410811-2410375 (view UCSC Genome Browser custom track)
Alignm length: 441
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 190

Conread position: 6-458
Cow position: chr16:37480973-37480527 (view UCSC Genome Browser custom track)
Alignm length: 459
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 30

Conread position: 6-545
Cow position: chr16:12537769-12537255 (view UCSC Genome Browser custom track)
Alignm length: 542
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 265, 187

Conread position: 6-552
Cow position: chr16:406878-406331 (view UCSC Genome Browser custom track)
Alignm length: 557
Alignm identity: 428
Alignm E-value: 0
Alignm gaps (pig, cow): 190, 23

Conread position: 6-552
Cow position: chr16:2482984-2482427 (view UCSC Genome Browser custom track)
Alignm length: 562
Alignm identity: 428
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 292

Conread position: 6-552
Cow position: chr16:3089048-3088494 (view UCSC Genome Browser custom track)
Alignm length: 561
Alignm identity: 402
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 151

Conread position: 6-552
Cow position: chr16:4478828-4478265 (view UCSC Genome Browser custom track)
Alignm length: 568
Alignm identity: 416
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 454

Conread position: 6-552
Cow position: chr16:5484886-5485435 (view UCSC Genome Browser custom track)
Alignm length: 560
Alignm identity: 413
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 184

Conread position: 6-552
Cow position: chr16:8815951-8815395 (view UCSC Genome Browser custom track)
Alignm length: 560
Alignm identity: 424
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 186

Conread position: 6-552
Cow position: chr16:14665655-14665103 (view UCSC Genome Browser custom track)
Alignm length: 562
Alignm identity: 424
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 197

Conread position: 6-552
Cow position: chr16:15185227-15185784 (view UCSC Genome Browser custom track)
Alignm length: 561
Alignm identity: 429
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 184

Conread position: 6-552
Cow position: chr16:15476996-15477549 (view UCSC Genome Browser custom track)
Alignm length: 561
Alignm identity: 420
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 196

Conread position: 6-552
Cow position: chr16:23535736-23535184 (view UCSC Genome Browser custom track)
Alignm length: 557
Alignm identity: 417
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 190

Conread position: 6-552
Cow position: chr16:25342124-25342677 (view UCSC Genome Browser custom track)
Alignm length: 568
Alignm identity: 414
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 190

Conread position: 6-552
Cow position: chr16:25441782-25442337 (view UCSC Genome Browser custom track)
Alignm length: 561
Alignm identity: 432
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 308

Conread position: 6-552
Cow position: chr16:25457308-25456771 (view UCSC Genome Browser custom track)
Alignm length: 559
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 191

Conread position: 6-552
Cow position: chr16:26663905-26664462 (view UCSC Genome Browser custom track)
Alignm length: 560
Alignm identity: 427
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 330

Conread position: 6-552
Cow position: chr16:28470946-28470364 (view UCSC Genome Browser custom track)
Alignm length: 583
Alignm identity: 408
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 0

Conread position: 6-552
Cow position: chr16:29047178-29047731 (view UCSC Genome Browser custom track)
Alignm length: 563
Alignm identity: 408
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 120

Conread position: 6-552
Cow position: chr16:31591764-31591208 (view UCSC Genome Browser custom track)
Alignm length: 561
Alignm identity: 426
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 205

Conread position: 6-552
Cow position: chr16:40296021-40295454 (view UCSC Genome Browser custom track)
Alignm length: 570
Alignm identity: 425
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 101

Conread position: 6-552
Cow position: chr16:43897120-43896554 (view UCSC Genome Browser custom track)
Alignm length: 569
Alignm identity: 427
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 185

Conread position: 7-552
Cow position: chr16:10438408-10438965 (view UCSC Genome Browser custom track)
Alignm length: 561
Alignm identity: 420
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 189

Conread position: 9-552
Cow position: chr16:23252276-23251718 (view UCSC Genome Browser custom track)
Alignm length: 565
Alignm identity: 423
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 88

Conread position: 10-551
Cow position: chr16:18498128-18497612 (view UCSC Genome Browser custom track)
Alignm length: 552
Alignm identity: 393
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 53

Conread position: 12-552
Cow position: chr16:34530475-34531006 (view UCSC Genome Browser custom track)
Alignm length: 564
Alignm identity: 402
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 13

Conread position: 15-549
Cow position: chr16:7676290-7675746 (view UCSC Genome Browser custom track)
Alignm length: 549
Alignm identity: 400
Alignm E-value: 0
Alignm gaps (pig, cow): 256, 175

Conread position: 21-552
Cow position: chr16:26105891-26105342 (view UCSC Genome Browser custom track)
Alignm length: 554
Alignm identity: 413
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 170

Conread position: 34-551
Cow position: chr16:837498-838023 (view UCSC Genome Browser custom track)
Alignm length: 533
Alignm identity: 400
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 267

Conread position: 34-552
Cow position: chr16:15567440-15567966 (view UCSC Genome Browser custom track)
Alignm length: 533
Alignm identity: 403
Alignm E-value: 0
Alignm gaps (pig, cow): 162, 147

Conread position: 39-525
Cow position: chr16:56916874-56916387 (view UCSC Genome Browser custom track)
Alignm length: 498
Alignm identity: 391
Alignm E-value: 0
Alignm gaps (pig, cow): 237, 148

Conread position: 39-546
Cow position: chr16:26978329-26978823 (view UCSC Genome Browser custom track)
Alignm length: 511
Alignm identity: 363
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 150

Conread position: 39-552
Cow position: chr16:3330144-3330645 (view UCSC Genome Browser custom track)
Alignm length: 524
Alignm identity: 385
Alignm E-value: 0
Alignm gaps (pig, cow): 151, 23

Conread position: 39-552
Cow position: chr16:9443591-9443079 (view UCSC Genome Browser custom track)
Alignm length: 529
Alignm identity: 332
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 165, 135

Conread position: 39-552
Cow position: chr16:23983488-23984006 (view UCSC Genome Browser custom track)
Alignm length: 526
Alignm identity: 395
Alignm E-value: 0
Alignm gaps (pig, cow): 232, 149

Conread position: 39-552
Cow position: chr16:49471852-49472345 (view UCSC Genome Browser custom track)
Alignm length: 520
Alignm identity: 342
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 236, 82

Conread position: 71-295
Cow position: chr16:9931071-9931286 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 171
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 81, 0

Conread position: 74-370
Cow position: chr16:7464053-7464350 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 135, 119

Conread position: 76-552
Cow position: chr16:49234403-49233927 (view UCSC Genome Browser custom track)
Alignm length: 487
Alignm identity: 376
Alignm E-value: 0
Alignm gaps (pig, cow): 195, 115

Conread position: 139-541
Cow position: chr16:16897751-16898147 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 35

Conread position: 145-542
Cow position: chr16:49221586-49221202 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 159

Conread position: 153-524
Cow position: chr16:41166340-41165974 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 34

Conread position: 161-502
Cow position: chr16:55049553-55049221 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 241
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 115, 18

Conread position: 164-552
Cow position: chr16:23808654-23809029 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 9

Conread position: 181-407
Cow position: chr16:41762172-41762401 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 163
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 51, 63

Conread position: 182-552
Cow position: chr16:28196911-28196535 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 60

Conread position: 183-480
Cow position: chr16:20202332-20202628 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 82

Conread position: 225-550
Cow position: chr16:2726854-2726509 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 302

Conread position: 229-552
Cow position: chr16:2238381-2238058 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 240
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 32, 161

Conread position: 242-552
Cow position: chr16:27732988-27732676 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 190

Conread position: 251-552
Cow position: chr16:5890398-5890707 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 190

Conread position: 302-552
Cow position: chr16:38023776-38024029 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 173
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 68, 117

Conread position: 309-552
Cow position: chr16:16520294-16520058 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 180
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 205, 21

Conread position: 328-552
Cow position: chr16:25258304-25258528 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 175
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 41, 70

Conread position: 332-552
Cow position: chr16:33011-33237 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 157
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 41, 0

Conread position: 370-552
Cow position: chr16:9931269-9931442 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 137
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 95, 67

Conread position: 384-552
Cow position: chr16:39366369-39366201 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 128
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 80, 45

Conread position: 386-552
Cow position: chr16:16228862-16229026 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 126
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 74, 124

Conread position: 395-552
Cow position: chr16:41685698-41685540 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 114
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 68, 0

Conread position: 396-552
Cow position: chr16:32937074-32937228 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 128
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 73, 21

Conread position: 1-489
Cow position: chr17:16121804-16121346 (view UCSC Genome Browser custom track)
Alignm length: 492
Alignm identity: 376
Alignm E-value: 0
Alignm gaps (pig, cow): 198, 45

Conread position: 1-524
Cow position: chr17:3708061-3707527 (view UCSC Genome Browser custom track)
Alignm length: 545
Alignm identity: 372
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 18

Conread position: 1-546
Cow position: chr17:23323731-23323177 (view UCSC Genome Browser custom track)
Alignm length: 562
Alignm identity: 407
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 154

Conread position: 1-547
Cow position: chr17:54732-54170 (view UCSC Genome Browser custom track)
Alignm length: 571
Alignm identity: 426
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 126

Conread position: 1-552
Cow position: chr17:151176-150609 (view UCSC Genome Browser custom track)
Alignm length: 576
Alignm identity: 428
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 155

Conread position: 1-552
Cow position: chr17:4942008-4941450 (view UCSC Genome Browser custom track)
Alignm length: 574
Alignm identity: 402
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 126

Conread position: 1-552
Cow position: chr17:14040315-14039765 (view UCSC Genome Browser custom track)
Alignm length: 562
Alignm identity: 426
Alignm E-value: 0
Alignm gaps (pig, cow): 251, 180

Conread position: 1-552
Cow position: chr17:15851414-15851973 (view UCSC Genome Browser custom track)
Alignm length: 564
Alignm identity: 411
Alignm E-value: 0
Alignm gaps (pig, cow): 276, 158

Conread position: 1-552
Cow position: chr17:20087028-20086485 (view UCSC Genome Browser custom track)
Alignm length: 562
Alignm identity: 420
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 112

Conread position: 2-552
Cow position: chr17:20081143-20080600 (view UCSC Genome Browser custom track)
Alignm length: 563
Alignm identity: 430
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 76

Conread position: 3-185
Cow position: chr17:11025790-11025607 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 137
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 35, 26

Conread position: 3-235
Cow position: chr17:42265690-42265917 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 176
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 41, 86

Conread position: 3-364
Cow position: chr17:20488662-20489029 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 17

Conread position: 3-486
Cow position: chr17:16899583-16899093 (view UCSC Genome Browser custom track)
Alignm length: 497
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 175

Conread position: 3-536
Cow position: chr17:2262828-2263370 (view UCSC Genome Browser custom track)
Alignm length: 547
Alignm identity: 369
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 227

Conread position: 3-552
Cow position: chr17:239067-239592 (view UCSC Genome Browser custom track)
Alignm length: 565
Alignm identity: 411
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 185

Conread position: 3-552
Cow position: chr17:1657128-1656573 (view UCSC Genome Browser custom track)
Alignm length: 566
Alignm identity: 405
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 8

Conread position: 3-552
Cow position: chr17:3655570-3655012 (view UCSC Genome Browser custom track)
Alignm length: 562
Alignm identity: 401
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 60

Conread position: 3-552
Cow position: chr17:6120436-6120990 (view UCSC Genome Browser custom track)
Alignm length: 563
Alignm identity: 415
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 448

Conread position: 3-552
Cow position: chr17:15436516-15437064 (view UCSC Genome Browser custom track)
Alignm length: 563
Alignm identity: 410
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 178

Conread position: 3-552
Cow position: chr17:31767317-31766756 (view UCSC Genome Browser custom track)
Alignm length: 563
Alignm identity: 405
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 192

Conread position: 3-552
Cow position: chr17:43989222-43989784 (view UCSC Genome Browser custom track)
Alignm length: 564
Alignm identity: 400
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 193

Conread position: 4-552
Cow position: chr17:20403147-20403699 (view UCSC Genome Browser custom track)
Alignm length: 565
Alignm identity: 429
Alignm E-value: 0
Alignm gaps (pig, cow): 177, 38

Conread position: 4-552
Cow position: chr17:24782883-24783442 (view UCSC Genome Browser custom track)
Alignm length: 563
Alignm identity: 408
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 191

Conread position: 5-368
Cow position: chr17:1880824-1881192 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 79

Conread position: 5-552
Cow position: chr17:4060823-4061385 (view UCSC Genome Browser custom track)
Alignm length: 566
Alignm identity: 438
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 20

Conread position: 6-127
Cow position: chr17:18102960-18102839 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 95
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 6-218
Cow position: chr17:38874355-38874572 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 156
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 38, 181

Conread position: 6-370
Cow position: chr17:14894888-14895265 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 91

Conread position: 6-516
Cow position: chr17:15324556-15325077 (view UCSC Genome Browser custom track)
Alignm length: 525
Alignm identity: 399
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 196

Conread position: 6-546
Cow position: chr17:5227345-5227897 (view UCSC Genome Browser custom track)
Alignm length: 565
Alignm identity: 401
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 33

Conread position: 6-551
Cow position: chr17:20099750-20099193 (view UCSC Genome Browser custom track)
Alignm length: 564
Alignm identity: 433
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 244

Conread position: 6-552
Cow position: chr17:250889-251417 (view UCSC Genome Browser custom track)
Alignm length: 556
Alignm identity: 395
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 156

Conread position: 6-552
Cow position: chr17:6069281-6069830 (view UCSC Genome Browser custom track)
Alignm length: 558
Alignm identity: 429
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 221

Conread position: 6-552
Cow position: chr17:6260584-6261141 (view UCSC Genome Browser custom track)
Alignm length: 560
Alignm identity: 424
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 388

Conread position: 6-552
Cow position: chr17:11086995-11086443 (view UCSC Genome Browser custom track)
Alignm length: 563
Alignm identity: 428
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 186

Conread position: 6-552
Cow position: chr17:14240225-14240785 (view UCSC Genome Browser custom track)
Alignm length: 562
Alignm identity: 416
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 190

Conread position: 6-552
Cow position: chr17:19268102-19267547 (view UCSC Genome Browser custom track)
Alignm length: 561
Alignm identity: 428
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 195

Conread position: 6-552
Cow position: chr17:24029277-24028719 (view UCSC Genome Browser custom track)
Alignm length: 564
Alignm identity: 424
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 190

Conread position: 6-552
Cow position: chr17:40805536-40806089 (view UCSC Genome Browser custom track)
Alignm length: 563
Alignm identity: 415
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 190

Conread position: 8-552
Cow position: chr17:18194538-18195068 (view UCSC Genome Browser custom track)
Alignm length: 558
Alignm identity: 390
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 171

Conread position: 9-261
Cow position: chr17:3642102-3641850 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 190, 180

Conread position: 9-365
Cow position: chr17:31532950-31533297 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 250
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 35, 132

Conread position: 11-552
Cow position: chr17:4082760-4083298 (view UCSC Genome Browser custom track)
Alignm length: 560
Alignm identity: 409
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 78

Conread position: 21-552
Cow position: chr17:2580360-2580902 (view UCSC Genome Browser custom track)
Alignm length: 549
Alignm identity: 412
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 128

Conread position: 31-428
Cow position: chr17:11689194-11689617 (view UCSC Genome Browser custom track)
Alignm length: 427
Alignm identity: 277
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 11, 248

Conread position: 33-552
Cow position: chr17:2030884-2031397 (view UCSC Genome Browser custom track)
Alignm length: 528
Alignm identity: 356
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 146

Conread position: 39-263
Cow position: chr17:2092039-2091818 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 155
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 219, 91

Conread position: 72-552
Cow position: chr17:2174607-2175077 (view UCSC Genome Browser custom track)
Alignm length: 490
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 199, 107

Conread position: 75-457
Cow position: chr17:22132999-22133380 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 72

Conread position: 104-552
Cow position: chr17:21418408-21418843 (view UCSC Genome Browser custom track)
Alignm length: 454
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 265, 77

Conread position: 128-487
Cow position: chr17:4784000-4783645 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 251
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 141, 41

Conread position: 135-552
Cow position: chr17:2078141-2077714 (view UCSC Genome Browser custom track)
Alignm length: 432
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 54

Conread position: 155-534
Cow position: chr17:2149314-2149697 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 19

Conread position: 245-552
Cow position: chr17:33284867-33284565 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 193

Conread position: 246-540
Cow position: chr17:42266384-42266672 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 219
Alignm E-value: 8.96831e-44
Alignm gaps (pig, cow): 26, 222

Conread position: 256-489
Cow position: chr17:19609202-19608964 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 181
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 21, 28

Conread position: 272-552
Cow position: chr17:14296273-14295991 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 200
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 93, 33

Conread position: 328-503
Cow position: chr17:4208450-4208616 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 146
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 110, 41

Conread position: 399-552
Cow position: chr17:3640774-3640624 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 117
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 116, 50

Conread position: 1-185
Cow position: chr18:33269752-33269939 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 155
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 0

Conread position: 1-551
Cow position: chr18:54170604-54170019 (view UCSC Genome Browser custom track)
Alignm length: 587
Alignm identity: 440
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 314

Conread position: 1-552
Cow position: chr18:2475232-2474707 (view UCSC Genome Browser custom track)
Alignm length: 553
Alignm identity: 350
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 260, 13

Conread position: 3-189
Cow position: chr18:26245391-26245577 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 141
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 24, 15

Conread position: 3-295
Cow position: chr18:51239222-51239515 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 210
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 195, 178

Conread position: 3-517
Cow position: chr18:36255975-36255474 (view UCSC Genome Browser custom track)
Alignm length: 529
Alignm identity: 362
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 146

Conread position: 3-546
Cow position: chr18:15856178-15856700 (view UCSC Genome Browser custom track)
Alignm length: 553
Alignm identity: 374
Alignm E-value: 0
Alignm gaps (pig, cow): 197, 114

Conread position: 3-552
Cow position: chr18:11274173-11273627 (view UCSC Genome Browser custom track)
Alignm length: 565
Alignm identity: 405
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 114

Conread position: 3-552
Cow position: chr18:16079600-16080163 (view UCSC Genome Browser custom track)
Alignm length: 564
Alignm identity: 415
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 0

Conread position: 3-552
Cow position: chr18:51342618-51343176 (view UCSC Genome Browser custom track)
Alignm length: 560
Alignm identity: 408
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 189

Conread position: 5-552
Cow position: chr18:54271431-54271966 (view UCSC Genome Browser custom track)
Alignm length: 561
Alignm identity: 396
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 48

Conread position: 6-306
Cow position: chr18:32653153-32653457 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 178

Conread position: 6-552
Cow position: chr18:14131329-14131884 (view UCSC Genome Browser custom track)
Alignm length: 559
Alignm identity: 426
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 190

Conread position: 6-552
Cow position: chr18:14416921-14417457 (view UCSC Genome Browser custom track)
Alignm length: 555
Alignm identity: 419
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 178

Conread position: 6-552
Cow position: chr18:16089077-16089608 (view UCSC Genome Browser custom track)
Alignm length: 554
Alignm identity: 406
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 79

Conread position: 6-552
Cow position: chr18:16175680-16175130 (view UCSC Genome Browser custom track)
Alignm length: 559
Alignm identity: 426
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 190

Conread position: 6-552
Cow position: chr18:23798585-23799138 (view UCSC Genome Browser custom track)
Alignm length: 559
Alignm identity: 430
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 190

Conread position: 6-552
Cow position: chr18:27837374-27836825 (view UCSC Genome Browser custom track)
Alignm length: 558
Alignm identity: 410
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 190

Conread position: 6-552
Cow position: chr18:27988127-27988675 (view UCSC Genome Browser custom track)
Alignm length: 568
Alignm identity: 416
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 301

Conread position: 6-552
Cow position: chr18:28972948-28972396 (view UCSC Genome Browser custom track)
Alignm length: 560
Alignm identity: 432
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 190

Conread position: 6-552
Cow position: chr18:37506897-37507449 (view UCSC Genome Browser custom track)
Alignm length: 561
Alignm identity: 434
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 178

Conread position: 6-552
Cow position: chr18:40479325-40479886 (view UCSC Genome Browser custom track)
Alignm length: 564
Alignm identity: 429
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 49

Conread position: 6-552
Cow position: chr18:41839872-41839316 (view UCSC Genome Browser custom track)
Alignm length: 570
Alignm identity: 415
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 161

Conread position: 6-552
Cow position: chr18:52651848-52652401 (view UCSC Genome Browser custom track)
Alignm length: 560
Alignm identity: 436
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 184

Conread position: 12-552
Cow position: chr18:29237847-29238384 (view UCSC Genome Browser custom track)
Alignm length: 550
Alignm identity: 421
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 180

Conread position: 39-552
Cow position: chr18:54005200-54004684 (view UCSC Genome Browser custom track)
Alignm length: 523
Alignm identity: 399
Alignm E-value: 0
Alignm gaps (pig, cow): 231, 154

Conread position: 41-552
Cow position: chr18:47742477-47742994 (view UCSC Genome Browser custom track)
Alignm length: 521
Alignm identity: 384
Alignm E-value: 0
Alignm gaps (pig, cow): 152, 46

Conread position: 60-550
Cow position: chr18:56013569-56014072 (view UCSC Genome Browser custom track)
Alignm length: 512
Alignm identity: 371
Alignm E-value: 0
Alignm gaps (pig, cow): 127, 12

Conread position: 84-269
Cow position: chr18:34042474-34042656 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 130
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 117, 73

Conread position: 88-288
Cow position: chr18:33337231-33337422 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 150
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 164, 101

Conread position: 126-552
Cow position: chr18:51461994-51461562 (view UCSC Genome Browser custom track)
Alignm length: 434
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 79

Conread position: 159-552
Cow position: chr18:25352348-25352752 (view UCSC Genome Browser custom track)
Alignm length: 408
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 112, 34

Conread position: 193-552
Cow position: chr18:29865484-29865121 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 31

Conread position: 261-552
Cow position: chr18:16276769-16276478 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 195
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 111, 48

Conread position: 318-552
Cow position: chr18:46876081-46875853 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 178
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 51, 160

Conread position: 361-552
Cow position: chr18:36509912-36510105 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 145
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 102, 147

Conread position: 396-552
Cow position: chr18:35054473-35054618 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 123
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 68, 41

Conread position: 399-552
Cow position: chr18:25921314-25921470 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 120
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 64, 110

Conread position: 1-474
Cow position: chr19:3138866-3139344 (view UCSC Genome Browser custom track)
Alignm length: 484
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 352

Conread position: 1-550
Cow position: chr19:40886810-40886243 (view UCSC Genome Browser custom track)
Alignm length: 580
Alignm identity: 398
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 136

Conread position: 1-552
Cow position: chr19:162205-161641 (view UCSC Genome Browser custom track)
Alignm length: 576
Alignm identity: 394
Alignm E-value: 0
Alignm gaps (pig, cow): 123, 38

Conread position: 1-552
Cow position: chr19:1588278-1587748 (view UCSC Genome Browser custom track)
Alignm length: 559
Alignm identity: 423
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 56

Conread position: 1-552
Cow position: chr19:28405772-28405216 (view UCSC Genome Browser custom track)
Alignm length: 565
Alignm identity: 430
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 226

Conread position: 1-552
Cow position: chr19:44036903-44037465 (view UCSC Genome Browser custom track)
Alignm length: 575
Alignm identity: 360
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 39, 30

Conread position: 2-550
Cow position: chr19:135856-135308 (view UCSC Genome Browser custom track)
Alignm length: 563
Alignm identity: 410
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 191

Conread position: 3-202
Cow position: chr19:190314-190521 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 144
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 35, 48

Conread position: 3-439
Cow position: chr19:167633-167178 (view UCSC Genome Browser custom track)
Alignm length: 457
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 21

Conread position: 3-552
Cow position: chr19:39235-39791 (view UCSC Genome Browser custom track)
Alignm length: 563
Alignm identity: 409
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 160

Conread position: 3-552
Cow position: chr19:5900565-5900016 (view UCSC Genome Browser custom track)
Alignm length: 561
Alignm identity: 404
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 187

Conread position: 5-551
Cow position: chr19:28594490-28595028 (view UCSC Genome Browser custom track)
Alignm length: 552
Alignm identity: 391
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 190

Conread position: 5-552
Cow position: chr19:50723492-50724045 (view UCSC Genome Browser custom track)
Alignm length: 558
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 9

Conread position: 6-357
Cow position: chr19:51674162-51673818 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 229
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 33, 27

Conread position: 6-368
Cow position: chr19:2273442-2273077 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 261, 187

Conread position: 6-551
Cow position: chr19:27036649-27036133 (view UCSC Genome Browser custom track)
Alignm length: 559
Alignm identity: 370
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 30, 63

Conread position: 6-552
Cow position: chr19:173173-173751 (view UCSC Genome Browser custom track)
Alignm length: 580
Alignm identity: 429
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 533

Conread position: 6-552
Cow position: chr19:438498-437946 (view UCSC Genome Browser custom track)
Alignm length: 561
Alignm identity: 411
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 190

Conread position: 6-552
Cow position: chr19:4386564-4387105 (view UCSC Genome Browser custom track)
Alignm length: 559
Alignm identity: 417
Alignm E-value: 0
Alignm gaps (pig, cow): 265, 175

Conread position: 6-552
Cow position: chr19:5729813-5730348 (view UCSC Genome Browser custom track)
Alignm length: 552
Alignm identity: 410
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 140

Conread position: 6-552
Cow position: chr19:12774058-12774597 (view UCSC Genome Browser custom track)
Alignm length: 551
Alignm identity: 411
Alignm E-value: 0
Alignm gaps (pig, cow): 265, 185

Conread position: 6-552
Cow position: chr19:28580718-28580179 (view UCSC Genome Browser custom track)
Alignm length: 556
Alignm identity: 412
Alignm E-value: 0
Alignm gaps (pig, cow): 163, 120

Conread position: 6-552
Cow position: chr19:33874366-33874908 (view UCSC Genome Browser custom track)
Alignm length: 558
Alignm identity: 412
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 184

Conread position: 6-552
Cow position: chr19:39391449-39392012 (view UCSC Genome Browser custom track)
Alignm length: 566
Alignm identity: 425
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 190

Conread position: 6-552
Cow position: chr19:40851509-40850966 (view UCSC Genome Browser custom track)
Alignm length: 559
Alignm identity: 411
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 105

Conread position: 8-552
Cow position: chr19:7489287-7489851 (view UCSC Genome Browser custom track)
Alignm length: 567
Alignm identity: 433
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 347

Conread position: 9-317
Cow position: chr19:204924-205239 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 0

Conread position: 11-306
Cow position: chr19:33942550-33942853 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 0

Conread position: 11-371
Cow position: chr19:75316-74954 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 112, 19

Conread position: 12-552
Cow position: chr19:342165-342720 (view UCSC Genome Browser custom track)
Alignm length: 567
Alignm identity: 402
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 387

Conread position: 21-462
Cow position: chr19:39096109-39096542 (view UCSC Genome Browser custom track)
Alignm length: 453
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 163, 12

Conread position: 33-334
Cow position: chr19:23376795-23377085 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 135

Conread position: 39-552
Cow position: chr19:7343043-7343563 (view UCSC Genome Browser custom track)
Alignm length: 522
Alignm identity: 384
Alignm E-value: 0
Alignm gaps (pig, cow): 232, 153

Conread position: 40-541
Cow position: chr19:52842543-52843028 (view UCSC Genome Browser custom track)
Alignm length: 506
Alignm identity: 327
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 131, 37

Conread position: 55-514
Cow position: chr19:25924319-25924781 (view UCSC Genome Browser custom track)
Alignm length: 469
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 174, 138

Conread position: 59-360
Cow position: chr19:32220624-32220309 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 219
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 123, 68

Conread position: 61-552
Cow position: chr19:892626-892142 (view UCSC Genome Browser custom track)
Alignm length: 502
Alignm identity: 369
Alignm E-value: 0
Alignm gaps (pig, cow): 138, 128

Conread position: 69-552
Cow position: chr19:30756216-30756710 (view UCSC Genome Browser custom track)
Alignm length: 503
Alignm identity: 369
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 115

Conread position: 104-551
Cow position: chr19:6713668-6713245 (view UCSC Genome Browser custom track)
Alignm length: 454
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 154, 78

Conread position: 108-516
Cow position: chr19:1656475-1656896 (view UCSC Genome Browser custom track)
Alignm length: 425
Alignm identity: 280
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 261, 71

Conread position: 114-552
Cow position: chr19:256306-256758 (view UCSC Genome Browser custom track)
Alignm length: 454
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 408

Conread position: 131-552
Cow position: chr19:40816450-40816016 (view UCSC Genome Browser custom track)
Alignm length: 435
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 0

Conread position: 136-411
Cow position: chr19:24294182-24294462 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 135, 57

Conread position: 150-552
Cow position: chr19:9707074-9706678 (view UCSC Genome Browser custom track)
Alignm length: 417
Alignm identity: 291
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 11, 74

Conread position: 170-552
Cow position: chr19:52150581-52150189 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 0

Conread position: 185-365
Cow position: chr19:264515-264700 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 139
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 85, 69

Conread position: 199-552
Cow position: chr19:33653593-33653236 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 239

Conread position: 208-552
Cow position: chr19:39667387-39667045 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 192

Conread position: 209-552
Cow position: chr19:5249599-5249239 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 243
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 31, 84

Conread position: 219-503
Cow position: chr19:3173968-3174260 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 0

Conread position: 256-552
Cow position: chr19:788595-788890 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 207
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 14, 184

Conread position: 286-482
Cow position: chr19:21339499-21339293 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 156
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 84, 103

Conread position: 292-552
Cow position: chr19:44031608-44031870 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 189
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 121, 75

Conread position: 351-552
Cow position: chr19:33942857-33943064 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 157
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 19, 98

Conread position: 368-552
Cow position: chr19:16319322-16319136 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 129
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 95, 0

Conread position: 369-539
Cow position: chr19:264959-265129 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 126
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 93, 106

Conread position: 1-239
Cow position: chr2:45964740-45964501 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 190
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 195

Conread position: 1-275
Cow position: chr2:41173045-41173320 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 13

Conread position: 1-321
Cow position: chr2:69140307-69140632 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 212
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 43, 176

Conread position: 1-360
Cow position: chr2:16290839-16291188 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 72

Conread position: 1-480
Cow position: chr2:14823475-14823951 (view UCSC Genome Browser custom track)
Alignm length: 493
Alignm identity: 381
Alignm E-value: 0
Alignm gaps (pig, cow): 187, 64

Conread position: 1-525
Cow position: chr2:36029992-36029468 (view UCSC Genome Browser custom track)
Alignm length: 539
Alignm identity: 390
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 51

Conread position: 1-535
Cow position: chr2:5870010-5869464 (view UCSC Genome Browser custom track)
Alignm length: 553
Alignm identity: 407
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 251

Conread position: 1-544
Cow position: chr2:31298159-31298719 (view UCSC Genome Browser custom track)
Alignm length: 563
Alignm identity: 420
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 173

Conread position: 1-546
Cow position: chr2:5484614-5484108 (view UCSC Genome Browser custom track)
Alignm length: 551
Alignm identity: 416
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 33

Conread position: 1-551
Cow position: chr2:28640474-28639908 (view UCSC Genome Browser custom track)
Alignm length: 569
Alignm identity: 408
Alignm E-value: 0
Alignm gaps (pig, cow): 189, 45

Conread position: 1-552
Cow position: chr2:6976569-6976031 (view UCSC Genome Browser custom track)
Alignm length: 564
Alignm identity: 347
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 37, 132

Conread position: 1-552
Cow position: chr2:11686889-11687416 (view UCSC Genome Browser custom track)
Alignm length: 560
Alignm identity: 367
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 43, 117

Conread position: 1-552
Cow position: chr2:15576462-15575916 (view UCSC Genome Browser custom track)
Alignm length: 567
Alignm identity: 421
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 65

Conread position: 1-552
Cow position: chr2:28613956-28613396 (view UCSC Genome Browser custom track)
Alignm length: 570
Alignm identity: 416
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 148

Conread position: 1-552
Cow position: chr2:32656046-32656581 (view UCSC Genome Browser custom track)
Alignm length: 566
Alignm identity: 422
Alignm E-value: 0
Alignm gaps (pig, cow): 180, 45

Conread position: 1-552
Cow position: chr2:34051544-34052094 (view UCSC Genome Browser custom track)
Alignm length: 563
Alignm identity: 411
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 144

Conread position: 1-552
Cow position: chr2:44990920-44990369 (view UCSC Genome Browser custom track)
Alignm length: 561
Alignm identity: 395
Alignm E-value: 0
Alignm gaps (pig, cow): 190, 23

Conread position: 1-552
Cow position: chr2:47602891-47602328 (view UCSC Genome Browser custom track)
Alignm length: 565
Alignm identity: 422
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 269

Conread position: 1-552
Cow position: chr2:51617625-51618196 (view UCSC Genome Browser custom track)
Alignm length: 578
Alignm identity: 441
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 157

Conread position: 1-552
Cow position: chr2:55483763-55483213 (view UCSC Genome Browser custom track)
Alignm length: 562
Alignm identity: 427
Alignm E-value: 0
Alignm gaps (pig, cow): 269, 42

Conread position: 1-552
Cow position: chr2:78742971-78743504 (view UCSC Genome Browser custom track)
Alignm length: 555
Alignm identity: 422
Alignm E-value: 0
Alignm gaps (pig, cow): 358, 180

Conread position: 2-478
Cow position: chr2:781064-780618 (view UCSC Genome Browser custom track)
Alignm length: 487
Alignm identity: 336
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 41, 112

Conread position: 2-532
Cow position: chr2:77391168-77391690 (view UCSC Genome Browser custom track)
Alignm length: 545
Alignm identity: 343
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 22, 16

Conread position: 2-536
Cow position: chr2:36052631-36052097 (view UCSC Genome Browser custom track)
Alignm length: 550
Alignm identity: 413
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 164

Conread position: 2-543
Cow position: chr2:16075132-16074605 (view UCSC Genome Browser custom track)
Alignm length: 554
Alignm identity: 406
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 104

Conread position: 3-230
Cow position: chr2:49472626-49472857 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 166
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 19, 194

Conread position: 3-336
Cow position: chr2:7903419-7903746 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 25

Conread position: 3-414
Cow position: chr2:67420571-67420152 (view UCSC Genome Browser custom track)
Alignm length: 423
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 129

Conread position: 3-432
Cow position: chr2:49627987-49628422 (view UCSC Genome Browser custom track)
Alignm length: 439
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 156

Conread position: 3-520
Cow position: chr2:2412418-2411893 (view UCSC Genome Browser custom track)
Alignm length: 529
Alignm identity: 382
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 114

Conread position: 3-523
Cow position: chr2:4402779-4402256 (view UCSC Genome Browser custom track)
Alignm length: 531
Alignm identity: 386
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 274

Conread position: 3-536
Cow position: chr2:3324181-3323639 (view UCSC Genome Browser custom track)
Alignm length: 546
Alignm identity: 393
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 101

Conread position: 3-544
Cow position: chr2:43961072-43961594 (view UCSC Genome Browser custom track)
Alignm length: 549
Alignm identity: 381
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 190

Conread position: 3-544
Cow position: chr2:74857600-74858136 (view UCSC Genome Browser custom track)
Alignm length: 555
Alignm identity: 381
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 121

Conread position: 3-546
Cow position: chr2:2087794-2087235 (view UCSC Genome Browser custom track)
Alignm length: 562
Alignm identity: 396
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 14

Conread position: 3-552
Cow position: chr2:364680-364131 (view UCSC Genome Browser custom track)
Alignm length: 562
Alignm identity: 401
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 194

Conread position: 3-552
Cow position: chr2:47038043-47037497 (view UCSC Genome Browser custom track)
Alignm length: 561
Alignm identity: 404
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 114

Conread position: 3-552
Cow position: chr2:54737860-54738425 (view UCSC Genome Browser custom track)
Alignm length: 569
Alignm identity: 404
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 345

Conread position: 5-295
Cow position: chr2:14777461-14777188 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 206
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 35, 79

Conread position: 5-552
Cow position: chr2:5903938-5903406 (view UCSC Genome Browser custom track)
Alignm length: 558
Alignm identity: 403
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 191

Conread position: 5-552
Cow position: chr2:28649218-28648668 (view UCSC Genome Browser custom track)
Alignm length: 560
Alignm identity: 421
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 191

Conread position: 6-352
Cow position: chr2:52062926-52063295 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 0

Conread position: 6-355
Cow position: chr2:66307727-66307365 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 202

Conread position: 6-385
Cow position: chr2:32065699-32065316 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 209

Conread position: 6-402
Cow position: chr2:12479689-12479285 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 180, 100

Conread position: 6-454
Cow position: chr2:11730210-11730636 (view UCSC Genome Browser custom track)
Alignm length: 461
Alignm identity: 316
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 34, 81

Conread position: 6-516
Cow position: chr2:24147247-24147755 (view UCSC Genome Browser custom track)
Alignm length: 521
Alignm identity: 387
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 99

Conread position: 6-524
Cow position: chr2:22078165-22078689 (view UCSC Genome Browser custom track)
Alignm length: 534
Alignm identity: 385
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 47

Conread position: 6-552
Cow position: chr2:8118923-8119480 (view UCSC Genome Browser custom track)
Alignm length: 562
Alignm identity: 436
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 190

Conread position: 6-552
Cow position: chr2:10185843-10185290 (view UCSC Genome Browser custom track)
Alignm length: 560
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 72

Conread position: 6-552
Cow position: chr2:11158737-11158183 (view UCSC Genome Browser custom track)
Alignm length: 561
Alignm identity: 422
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 145

Conread position: 6-552
Cow position: chr2:13045332-13044776 (view UCSC Genome Browser custom track)
Alignm length: 559
Alignm identity: 430
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 190

Conread position: 6-552
Cow position: chr2:16900634-16901193 (view UCSC Genome Browser custom track)
Alignm length: 566
Alignm identity: 441
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 267

Conread position: 6-552
Cow position: chr2:19011727-19012299 (view UCSC Genome Browser custom track)
Alignm length: 573
Alignm identity: 434
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 0

Conread position: 6-552
Cow position: chr2:24924944-24925505 (view UCSC Genome Browser custom track)
Alignm length: 566
Alignm identity: 422
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 187

Conread position: 6-552
Cow position: chr2:28793629-28794177 (view UCSC Genome Browser custom track)
Alignm length: 562
Alignm identity: 417
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 193

Conread position: 6-552
Cow position: chr2:47811227-47811786 (view UCSC Genome Browser custom track)
Alignm length: 564
Alignm identity: 419
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 63

Conread position: 6-552
Cow position: chr2:50077981-50078504 (view UCSC Genome Browser custom track)
Alignm length: 554
Alignm identity: 407
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 135

Conread position: 6-552
Cow position: chr2:53330143-53330701 (view UCSC Genome Browser custom track)
Alignm length: 562
Alignm identity: 421
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 195

Conread position: 6-552
Cow position: chr2:81257555-81258113 (view UCSC Genome Browser custom track)
Alignm length: 567
Alignm identity: 414
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 188

Conread position: 7-531
Cow position: chr2:13482270-13481780 (view UCSC Genome Browser custom track)
Alignm length: 531
Alignm identity: 380
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 36

Conread position: 8-237
Cow position: chr2:53662092-53662323 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 174
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 28, 76

Conread position: 9-550
Cow position: chr2:42670321-42669772 (view UCSC Genome Browser custom track)
Alignm length: 554
Alignm identity: 415
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 208

Conread position: 9-552
Cow position: chr2:282305-281748 (view UCSC Genome Browser custom track)
Alignm length: 563
Alignm identity: 421
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 182

Conread position: 9-552
Cow position: chr2:36980765-36981326 (view UCSC Genome Browser custom track)
Alignm length: 567
Alignm identity: 415
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 142

Conread position: 10-529
Cow position: chr2:37789537-37789007 (view UCSC Genome Browser custom track)
Alignm length: 549
Alignm identity: 385
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 107

Conread position: 11-311
Cow position: chr2:27317699-27317993 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 79

Conread position: 16-205
Cow position: chr2:195151-194963 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 150
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 28, 106

Conread position: 21-551
Cow position: chr2:28619559-28619029 (view UCSC Genome Browser custom track)
Alignm length: 542
Alignm identity: 401
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 137

Conread position: 24-552
Cow position: chr2:72188073-72187567 (view UCSC Genome Browser custom track)
Alignm length: 540
Alignm identity: 382
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 158

Conread position: 25-552
Cow position: chr2:38801386-38800872 (view UCSC Genome Browser custom track)
Alignm length: 532
Alignm identity: 337
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 66, 17

Conread position: 32-552
Cow position: chr2:9189605-9189087 (view UCSC Genome Browser custom track)
Alignm length: 546
Alignm identity: 382
Alignm E-value: 0
Alignm gaps (pig, cow): 137, 15

Conread position: 39-360
Cow position: chr2:4926996-4926680 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 225
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 117, 55

Conread position: 39-481
Cow position: chr2:51998510-51998059 (view UCSC Genome Browser custom track)
Alignm length: 459
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 131, 257

Conread position: 39-552
Cow position: chr2:175146-174628 (view UCSC Genome Browser custom track)
Alignm length: 526
Alignm identity: 385
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 175

Conread position: 56-552
Cow position: chr2:34564208-34563738 (view UCSC Genome Browser custom track)
Alignm length: 503
Alignm identity: 371
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 103

Conread position: 61-552
Cow position: chr2:247432-246944 (view UCSC Genome Browser custom track)
Alignm length: 502
Alignm identity: 377
Alignm E-value: 0
Alignm gaps (pig, cow): 297, 77

Conread position: 88-546
Cow position: chr2:32372914-32372465 (view UCSC Genome Browser custom track)
Alignm length: 464
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 183, 89

Conread position: 95-435
Cow position: chr2:31390449-31390790 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 217
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 278, 29

Conread position: 105-552
Cow position: chr2:45916354-45915903 (view UCSC Genome Browser custom track)
Alignm length: 459
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 80

Conread position: 111-552
Cow position: chr2:25888052-25887613 (view UCSC Genome Browser custom track)
Alignm length: 451
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 76

Conread position: 139-552
Cow position: chr2:72234437-72234034 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 263
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 26, 9

Conread position: 150-531
Cow position: chr2:11693015-11693403 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 254
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 121, 30

Conread position: 168-552
Cow position: chr2:65937692-65937296 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 25

Conread position: 178-552
Cow position: chr2:41687328-41687704 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 42

Conread position: 182-552
Cow position: chr2:57336103-57336482 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 326

Conread position: 183-516
Cow position: chr2:50982789-50982456 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 56

Conread position: 194-552
Cow position: chr2:41180708-41181066 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 257
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 43, 85

Conread position: 215-552
Cow position: chr2:32434726-32434385 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 102

Conread position: 222-545
Cow position: chr2:38374388-38374710 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 235
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 35, 20

Conread position: 225-552
Cow position: chr2:80292151-80291827 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 17

Conread position: 230-552
Cow position: chr2:12223667-12223341 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 240
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 41, 272

Conread position: 254-523
Cow position: chr2:73193695-73193958 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 195
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 42, 33

Conread position: 269-552
Cow position: chr2:72681462-72681181 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 198
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 49, 89

Conread position: 271-552
Cow position: chr2:19225529-19225810 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 150

Conread position: 311-552
Cow position: chr2:43445640-43445884 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 189
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 58, 87

Conread position: 315-552
Cow position: chr2:45938989-45938755 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 193
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 185

Conread position: 328-552
Cow position: chr2:32458337-32458123 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 167
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 135, 54

Conread position: 337-552
Cow position: chr2:10264689-10264470 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 171
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 33, 91

Conread position: 341-552
Cow position: chr2:6880076-6880290 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 166
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 34, 57

Conread position: 344-552
Cow position: chr2:25743261-25743479 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 163
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 26, 142

Conread position: 368-541
Cow position: chr2:16291437-16291613 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 139
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 59, 143

Conread position: 368-552
Cow position: chr2:41154571-41154754 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 145
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 95, 67

Conread position: 1-239
Cow position: chr20:31498202-31497963 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 174
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 43, 180

Conread position: 1-322
Cow position: chr20:10101808-10101481 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 182, 276

Conread position: 1-544
Cow position: chr20:15066373-15066912 (view UCSC Genome Browser custom track)
Alignm length: 557
Alignm identity: 413
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 90

Conread position: 1-552
Cow position: chr20:13679153-13678591 (view UCSC Genome Browser custom track)
Alignm length: 571
Alignm identity: 430
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 95

Conread position: 1-552
Cow position: chr20:18314454-18313914 (view UCSC Genome Browser custom track)
Alignm length: 560
Alignm identity: 435
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 54

Conread position: 1-552
Cow position: chr20:24615974-24615438 (view UCSC Genome Browser custom track)
Alignm length: 563
Alignm identity: 430
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 266

Conread position: 2-540
Cow position: chr20:8216409-8216956 (view UCSC Genome Browser custom track)
Alignm length: 557
Alignm identity: 433
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 303

Conread position: 2-552
Cow position: chr20:5465944-5466470 (view UCSC Genome Browser custom track)
Alignm length: 561
Alignm identity: 375
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 74

Conread position: 3-275
Cow position: chr20:13433703-13433429 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 200
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 41, 93

Conread position: 3-552
Cow position: chr20:823656-824225 (view UCSC Genome Browser custom track)
Alignm length: 573
Alignm identity: 417
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 49

Conread position: 4-531
Cow position: chr20:14870052-14869530 (view UCSC Genome Browser custom track)
Alignm length: 540
Alignm identity: 391
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 100

Conread position: 4-552
Cow position: chr20:19438813-19439370 (view UCSC Genome Browser custom track)
Alignm length: 559
Alignm identity: 407
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 191

Conread position: 5-552
Cow position: chr20:13763806-13764350 (view UCSC Genome Browser custom track)
Alignm length: 553
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 365, 188

Conread position: 6-551
Cow position: chr20:21394826-21395371 (view UCSC Genome Browser custom track)
Alignm length: 562
Alignm identity: 417
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 286

Conread position: 6-552
Cow position: chr20:5535834-5536398 (view UCSC Genome Browser custom track)
Alignm length: 569
Alignm identity: 430
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 155

Conread position: 6-552
Cow position: chr20:8367012-8366483 (view UCSC Genome Browser custom track)
Alignm length: 559
Alignm identity: 355
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 34, 28

Conread position: 6-552
Cow position: chr20:12569420-12569957 (view UCSC Genome Browser custom track)
Alignm length: 558
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 186

Conread position: 6-552
Cow position: chr20:15096981-15096439 (view UCSC Genome Browser custom track)
Alignm length: 559
Alignm identity: 411
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 178

Conread position: 6-552
Cow position: chr20:15292902-15293436 (view UCSC Genome Browser custom track)
Alignm length: 556
Alignm identity: 405
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 163

Conread position: 6-552
Cow position: chr20:23468763-23468208 (view UCSC Genome Browser custom track)
Alignm length: 559
Alignm identity: 421
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 190

Conread position: 6-552
Cow position: chr20:23799783-23800341 (view UCSC Genome Browser custom track)
Alignm length: 560
Alignm identity: 415
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 190

Conread position: 6-552
Cow position: chr20:25849928-25849367 (view UCSC Genome Browser custom track)
Alignm length: 571
Alignm identity: 422
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 110

Conread position: 6-552
Cow position: chr20:27870103-27870662 (view UCSC Genome Browser custom track)
Alignm length: 562
Alignm identity: 422
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 190

Conread position: 6-552
Cow position: chr20:28161719-28162279 (view UCSC Genome Browser custom track)
Alignm length: 575
Alignm identity: 423
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 294

Conread position: 6-552
Cow position: chr20:28564690-28564139 (view UCSC Genome Browser custom track)
Alignm length: 565
Alignm identity: 408
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 128

Conread position: 6-552
Cow position: chr20:29949403-29949983 (view UCSC Genome Browser custom track)
Alignm length: 584
Alignm identity: 431
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 354

Conread position: 9-516
Cow position: chr20:35125398-35125912 (view UCSC Genome Browser custom track)
Alignm length: 520
Alignm identity: 389
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 62

Conread position: 10-371
Cow position: chr20:12437803-12437446 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 186, 179

Conread position: 30-503
Cow position: chr20:35105701-35106186 (view UCSC Genome Browser custom track)
Alignm length: 498
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 103

Conread position: 39-541
Cow position: chr20:19355703-19356211 (view UCSC Genome Browser custom track)
Alignm length: 512
Alignm identity: 386
Alignm E-value: 0
Alignm gaps (pig, cow): 232, 162

Conread position: 39-552
Cow position: chr20:32215968-32216465 (view UCSC Genome Browser custom track)
Alignm length: 518
Alignm identity: 325
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 324, 66

Conread position: 44-526
Cow position: chr20:27897105-27896603 (view UCSC Genome Browser custom track)
Alignm length: 511
Alignm identity: 334
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 121, 258

Conread position: 72-552
Cow position: chr20:38917330-38917807 (view UCSC Genome Browser custom track)
Alignm length: 484
Alignm identity: 297
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 188, 177

Conread position: 81-552
Cow position: chr20:30686547-30687030 (view UCSC Genome Browser custom track)
Alignm length: 485
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 112, 437

Conread position: 103-546
Cow position: chr20:16178763-16178315 (view UCSC Genome Browser custom track)
Alignm length: 456
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 266, 16

Conread position: 170-552
Cow position: chr20:9521066-9520682 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 21

Conread position: 177-552
Cow position: chr20:21915702-21916091 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 342

Conread position: 229-552
Cow position: chr20:17660621-17660287 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 288

Conread position: 272-503
Cow position: chr20:14742477-14742707 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 154
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 87, 60

Conread position: 281-552
Cow position: chr20:9546849-9547106 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 200
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 88, 22

Conread position: 328-552
Cow position: chr20:19340864-19341086 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 186
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 58

Conread position: 351-552
Cow position: chr20:33182887-33182686 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 143
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 158, 87

Conread position: 368-552
Cow position: chr20:12437152-12436967 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 142
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 95, 76

Conread position: 1-137
Cow position: chr21:4077842-4077981 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 116
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 37, 0

Conread position: 1-226
Cow position: chr21:6624781-6625008 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 179
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 89

Conread position: 1-259
Cow position: chr21:13313768-13314024 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 207
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 77

Conread position: 1-260
Cow position: chr21:37719011-37718756 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 137

Conread position: 1-471
Cow position: chr21:467877-468342 (view UCSC Genome Browser custom track)
Alignm length: 480
Alignm identity: 355
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 125

Conread position: 1-521
Cow position: chr21:30086-30599 (view UCSC Genome Browser custom track)
Alignm length: 532
Alignm identity: 401
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 194

Conread position: 1-535
Cow position: chr21:26402479-26401942 (view UCSC Genome Browser custom track)
Alignm length: 547
Alignm identity: 390
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 195

Conread position: 1-543
Cow position: chr21:9892900-9893448 (view UCSC Genome Browser custom track)
Alignm length: 563
Alignm identity: 402
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 211

Conread position: 1-546
Cow position: chr21:2417225-2417773 (view UCSC Genome Browser custom track)
Alignm length: 558
Alignm identity: 439
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 149

Conread position: 1-552
Cow position: chr21:360652-361230 (view UCSC Genome Browser custom track)
Alignm length: 587
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 483

Conread position: 1-552
Cow position: chr21:4184913-4185485 (view UCSC Genome Browser custom track)
Alignm length: 578
Alignm identity: 443
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 253

Conread position: 1-552
Cow position: chr21:45491058-45491610 (view UCSC Genome Browser custom track)
Alignm length: 559
Alignm identity: 344
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 23, 180

Conread position: 3-189
Cow position: chr21:20743569-20743381 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 144
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 35, 109

Conread position: 3-262
Cow position: chr21:49325471-49325730 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 173
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 35, 181

Conread position: 3-507
Cow position: chr21:18817543-18817023 (view UCSC Genome Browser custom track)
Alignm length: 525
Alignm identity: 393
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 154

Conread position: 3-540
Cow position: chr21:28256444-28256997 (view UCSC Genome Browser custom track)
Alignm length: 566
Alignm identity: 405
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 133

Conread position: 3-552
Cow position: chr21:1287207-1286647 (view UCSC Genome Browser custom track)
Alignm length: 578
Alignm identity: 430
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 292

Conread position: 3-552
Cow position: chr21:34823202-34822644 (view UCSC Genome Browser custom track)
Alignm length: 561
Alignm identity: 408
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 13

Conread position: 4-512
Cow position: chr21:4588982-4588457 (view UCSC Genome Browser custom track)
Alignm length: 535
Alignm identity: 396
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 117

Conread position: 5-284
Cow position: chr21:48292462-48292747 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 115

Conread position: 6-295
Cow position: chr21:10567690-10567973 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 254, 33

Conread position: 6-306
Cow position: chr21:5018127-5018431 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 175, 0

Conread position: 6-416
Cow position: chr21:2882724-2882315 (view UCSC Genome Browser custom track)
Alignm length: 417
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 12

Conread position: 6-450
Cow position: chr21:1192774-1193219 (view UCSC Genome Browser custom track)
Alignm length: 452
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 190, 181

Conread position: 6-541
Cow position: chr21:5840250-5839706 (view UCSC Genome Browser custom track)
Alignm length: 548
Alignm identity: 415
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 184

Conread position: 6-552
Cow position: chr21:146943-147490 (view UCSC Genome Browser custom track)
Alignm length: 557
Alignm identity: 424
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 186

Conread position: 6-552
Cow position: chr21:31515314-31514748 (view UCSC Genome Browser custom track)
Alignm length: 567
Alignm identity: 431
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 0

Conread position: 6-552
Cow position: chr21:33253190-33253749 (view UCSC Genome Browser custom track)
Alignm length: 567
Alignm identity: 419
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 104

Conread position: 6-552
Cow position: chr21:35144771-35145318 (view UCSC Genome Browser custom track)
Alignm length: 559
Alignm identity: 427
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 168

Conread position: 6-552
Cow position: chr21:40270658-40270106 (view UCSC Genome Browser custom track)
Alignm length: 562
Alignm identity: 427
Alignm E-value: 0
Alignm gaps (pig, cow): 193, 183

Conread position: 9-552
Cow position: chr21:3779784-3780340 (view UCSC Genome Browser custom track)
Alignm length: 558
Alignm identity: 427
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 184

Conread position: 9-552
Cow position: chr21:27069951-27069394 (view UCSC Genome Browser custom track)
Alignm length: 562
Alignm identity: 420
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 308

Conread position: 11-552
Cow position: chr21:37372256-37372801 (view UCSC Genome Browser custom track)
Alignm length: 552
Alignm identity: 405
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 184

Conread position: 15-411
Cow position: chr21:26835913-26836321 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 157

Conread position: 16-552
Cow position: chr21:45782505-45783042 (view UCSC Genome Browser custom track)
Alignm length: 546
Alignm identity: 415
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 369

Conread position: 19-545
Cow position: chr21:30598447-30597919 (view UCSC Genome Browser custom track)
Alignm length: 538
Alignm identity: 405
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 147

Conread position: 25-365
Cow position: chr21:40080332-40080668 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 231
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 15, 22

Conread position: 39-552
Cow position: chr21:10851129-10851643 (view UCSC Genome Browser custom track)
Alignm length: 527
Alignm identity: 392
Alignm E-value: 0
Alignm gaps (pig, cow): 152, 314

Conread position: 39-552
Cow position: chr21:27284502-27285035 (view UCSC Genome Browser custom track)
Alignm length: 535
Alignm identity: 404
Alignm E-value: 0
Alignm gaps (pig, cow): 127, 424

Conread position: 43-371
Cow position: chr21:2673953-2673623 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 155, 146

Conread position: 48-484
Cow position: chr21:29625685-29625221 (view UCSC Genome Browser custom track)
Alignm length: 466
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 192, 144

Conread position: 49-552
Cow position: chr21:27036341-27035831 (view UCSC Genome Browser custom track)
Alignm length: 512
Alignm identity: 379
Alignm E-value: 0
Alignm gaps (pig, cow): 232, 143

Conread position: 55-552
Cow position: chr21:7063581-7064070 (view UCSC Genome Browser custom track)
Alignm length: 505
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 314, 17

Conread position: 66-552
Cow position: chr21:47942024-47942515 (view UCSC Genome Browser custom track)
Alignm length: 494
Alignm identity: 375
Alignm E-value: 0
Alignm gaps (pig, cow): 303, 127

Conread position: 69-552
Cow position: chr21:17167635-17168118 (view UCSC Genome Browser custom track)
Alignm length: 493
Alignm identity: 311
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 130, 35

Conread position: 91-552
Cow position: chr21:28736275-28736735 (view UCSC Genome Browser custom track)
Alignm length: 475
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 87

Conread position: 103-552
Cow position: chr21:47646455-47646901 (view UCSC Genome Browser custom track)
Alignm length: 464
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 42

Conread position: 111-521
Cow position: chr21:11452424-11452018 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 256, 81

Conread position: 114-552
Cow position: chr21:26849896-26849452 (view UCSC Genome Browser custom track)
Alignm length: 449
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 16

Conread position: 159-552
Cow position: chr21:27566915-27567312 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 31

Conread position: 195-407
Cow position: chr21:4077988-4078197 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 163
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 175, 66

Conread position: 208-552
Cow position: chr21:5012487-5012141 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 18

Conread position: 210-552
Cow position: chr21:28613567-28613894 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 94

Conread position: 250-436
Cow position: chr21:37718644-37718461 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 145
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 120, 22

Conread position: 273-531
Cow position: chr21:39480324-39480069 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 171
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 190, 9

Conread position: 396-552
Cow position: chr21:2673557-2673402 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 120
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 59, 34

Conread position: 416-552
Cow position: chr21:13298030-13298164 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 110
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 50, 19

Conread position: 428-552
Cow position: chr21:31250454-31250578 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 97
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 36, 48

Conread position: 1-366
Cow position: chr22:15313115-15312746 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 304

Conread position: 1-368
Cow position: chr22:41418478-41418117 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 184

Conread position: 1-387
Cow position: chr22:11032584-11032979 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 0

Conread position: 1-407
Cow position: chr22:37133491-37133900 (view UCSC Genome Browser custom track)
Alignm length: 417
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 180, 228

Conread position: 1-411
Cow position: chr22:44477447-44477877 (view UCSC Genome Browser custom track)
Alignm length: 437
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 89

Conread position: 1-521
Cow position: chr22:1323049-1323568 (view UCSC Genome Browser custom track)
Alignm length: 529
Alignm identity: 399
Alignm E-value: 0
Alignm gaps (pig, cow): 274, 38

Conread position: 1-552
Cow position: chr22:1281894-1281339 (view UCSC Genome Browser custom track)
Alignm length: 575
Alignm identity: 433
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 106

Conread position: 1-552
Cow position: chr22:8737493-8736954 (view UCSC Genome Browser custom track)
Alignm length: 559
Alignm identity: 420
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 189

Conread position: 1-552
Cow position: chr22:44397282-44397826 (view UCSC Genome Browser custom track)
Alignm length: 570
Alignm identity: 409
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 270

Conread position: 2-552
Cow position: chr22:12730846-12730301 (view UCSC Genome Browser custom track)
Alignm length: 561
Alignm identity: 424
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 175

Conread position: 3-543
Cow position: chr22:326331-325803 (view UCSC Genome Browser custom track)
Alignm length: 555
Alignm identity: 392
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 155

Conread position: 3-550
Cow position: chr22:37267999-37268560 (view UCSC Genome Browser custom track)
Alignm length: 565
Alignm identity: 398
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 102

Conread position: 3-552
Cow position: chr22:3803027-3803576 (view UCSC Genome Browser custom track)
Alignm length: 566
Alignm identity: 417
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 104

Conread position: 3-552
Cow position: chr22:6021501-6022059 (view UCSC Genome Browser custom track)
Alignm length: 563
Alignm identity: 414
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 189

Conread position: 3-552
Cow position: chr22:11804218-11803656 (view UCSC Genome Browser custom track)
Alignm length: 563
Alignm identity: 407
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 0

Conread position: 3-552
Cow position: chr22:16201765-16202308 (view UCSC Genome Browser custom track)
Alignm length: 558
Alignm identity: 404
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 190

Conread position: 3-552
Cow position: chr22:18028120-18028683 (view UCSC Genome Browser custom track)
Alignm length: 567
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 260

Conread position: 3-552
Cow position: chr22:20240004-20239444 (view UCSC Genome Browser custom track)
Alignm length: 562
Alignm identity: 400
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 193

Conread position: 3-552
Cow position: chr22:27308937-27308383 (view UCSC Genome Browser custom track)
Alignm length: 561
Alignm identity: 403
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 179

Conread position: 3-552
Cow position: chr22:44491872-44492450 (view UCSC Genome Browser custom track)
Alignm length: 580
Alignm identity: 411
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 114

Conread position: 4-552
Cow position: chr22:6502305-6501743 (view UCSC Genome Browser custom track)
Alignm length: 571
Alignm identity: 435
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 86

Conread position: 6-261
Cow position: chr22:31314188-31314444 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 187

Conread position: 6-527
Cow position: chr22:21590179-21590705 (view UCSC Genome Browser custom track)
Alignm length: 533
Alignm identity: 360
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 190

Conread position: 6-546
Cow position: chr22:34169180-34169729 (view UCSC Genome Browser custom track)
Alignm length: 553
Alignm identity: 425
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 190

Conread position: 6-552
Cow position: chr22:559869-559310 (view UCSC Genome Browser custom track)
Alignm length: 561
Alignm identity: 420
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 513

Conread position: 6-552
Cow position: chr22:6332552-6333108 (view UCSC Genome Browser custom track)
Alignm length: 560
Alignm identity: 421
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 73

Conread position: 6-552
Cow position: chr22:13673969-13673411 (view UCSC Genome Browser custom track)
Alignm length: 569
Alignm identity: 392
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 21

Conread position: 6-552
Cow position: chr22:18815539-18814970 (view UCSC Genome Browser custom track)
Alignm length: 573
Alignm identity: 428
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 460

Conread position: 6-552
Cow position: chr22:19142848-19142285 (view UCSC Genome Browser custom track)
Alignm length: 572
Alignm identity: 424
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 140

Conread position: 6-552
Cow position: chr22:31334193-31333649 (view UCSC Genome Browser custom track)
Alignm length: 559
Alignm identity: 412
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 184

Conread position: 6-552
Cow position: chr22:36860691-36860153 (view UCSC Genome Browser custom track)
Alignm length: 557
Alignm identity: 423
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 72

Conread position: 6-552
Cow position: chr22:42992021-42992571 (view UCSC Genome Browser custom track)
Alignm length: 557
Alignm identity: 430
Alignm E-value: 0
Alignm gaps (pig, cow): 274, 75

Conread position: 6-552
Cow position: chr22:44934814-44935363 (view UCSC Genome Browser custom track)
Alignm length: 555
Alignm identity: 416
Alignm E-value: 0
Alignm gaps (pig, cow): 265, 187

Conread position: 8-261
Cow position: chr22:37072241-37071983 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 193
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 30, 184

Conread position: 9-319
Cow position: chr22:44350818-44350505 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 214

Conread position: 9-552
Cow position: chr22:39468676-39468119 (view UCSC Genome Browser custom track)
Alignm length: 561
Alignm identity: 433
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 342

Conread position: 11-552
Cow position: chr22:46580891-46580323 (view UCSC Genome Browser custom track)
Alignm length: 574
Alignm identity: 402
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 440

Conread position: 12-356
Cow position: chr22:46612722-46613057 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 121

Conread position: 12-542
Cow position: chr22:35906535-35906006 (view UCSC Genome Browser custom track)
Alignm length: 549
Alignm identity: 409
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 59

Conread position: 12-552
Cow position: chr22:1520173-1519625 (view UCSC Genome Browser custom track)
Alignm length: 554
Alignm identity: 421
Alignm E-value: 0
Alignm gaps (pig, cow): 181, 479

Conread position: 15-486
Cow position: chr22:15053573-15054036 (view UCSC Genome Browser custom track)
Alignm length: 479
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 187, 75

Conread position: 15-552
Cow position: chr22:37292815-37292279 (view UCSC Genome Browser custom track)
Alignm length: 546
Alignm identity: 416
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 177

Conread position: 21-268
Cow position: chr22:41240231-41240471 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 180
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 23, 120

Conread position: 21-550
Cow position: chr22:45510672-45510150 (view UCSC Genome Browser custom track)
Alignm length: 543
Alignm identity: 348
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 23, 96

Conread position: 39-552
Cow position: chr22:36184635-36185152 (view UCSC Genome Browser custom track)
Alignm length: 525
Alignm identity: 388
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 205

Conread position: 48-295
Cow position: chr22:23770643-23770887 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 182
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 151, 68

Conread position: 77-552
Cow position: chr22:316418-316900 (view UCSC Genome Browser custom track)
Alignm length: 498
Alignm identity: 357
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 148

Conread position: 83-541
Cow position: chr22:40370372-40370819 (view UCSC Genome Browser custom track)
Alignm length: 466
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 114, 131

Conread position: 95-552
Cow position: chr22:13773461-13773915 (view UCSC Genome Browser custom track)
Alignm length: 471
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 176

Conread position: 116-552
Cow position: chr22:44606718-44606287 (view UCSC Genome Browser custom track)
Alignm length: 441
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 147, 55

Conread position: 118-480
Cow position: chr22:30677727-30677367 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 251, 74

Conread position: 127-550
Cow position: chr22:34600315-34600737 (view UCSC Genome Browser custom track)
Alignm length: 430
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 134

Conread position: 130-552
Cow position: chr22:19536522-19536948 (view UCSC Genome Browser custom track)
Alignm length: 430
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 239, 62

Conread position: 146-549
Cow position: chr22:1268773-1268361 (view UCSC Genome Browser custom track)
Alignm length: 419
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 25

Conread position: 150-552
Cow position: chr22:8121095-8120693 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 290

Conread position: 166-552
Cow position: chr22:35670644-35670270 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 34

Conread position: 185-552
Cow position: chr22:3305556-3305203 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 141

Conread position: 194-551
Cow position: chr22:21035357-21034996 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 65

Conread position: 250-551
Cow position: chr22:39689581-39689874 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 205
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 11, 48

Conread position: 252-552
Cow position: chr22:7304566-7304259 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 97

Conread position: 259-546
Cow position: chr22:36579181-36578883 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 212
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 111, 192

Conread position: 281-552
Cow position: chr22:38550511-38550779 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 205
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 89, 27

Conread position: 282-481
Cow position: chr22:26536175-26536377 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 140
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 88, 196

Conread position: 315-552
Cow position: chr22:19243558-19243792 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 173
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 58, 16

Conread position: 428-552
Cow position: chr22:30128855-30128981 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 107
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 37, 82

Conread position: 428-552
Cow position: chr22:30146504-30146630 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 107
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 37, 82

Conread position: 1-335
Cow position: chr23:8286867-8287204 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 110

Conread position: 1-505
Cow position: chr23:25683099-25682614 (view UCSC Genome Browser custom track)
Alignm length: 515
Alignm identity: 384
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 100

Conread position: 1-552
Cow position: chr23:1012955-1012412 (view UCSC Genome Browser custom track)
Alignm length: 563
Alignm identity: 381
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 10

Conread position: 1-552
Cow position: chr23:5873742-5873181 (view UCSC Genome Browser custom track)
Alignm length: 565
Alignm identity: 429
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 122

Conread position: 1-552
Cow position: chr23:29402884-29402323 (view UCSC Genome Browser custom track)
Alignm length: 566
Alignm identity: 393
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 181

Conread position: 1-552
Cow position: chr23:29451504-29450957 (view UCSC Genome Browser custom track)
Alignm length: 564
Alignm identity: 437
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 104

Conread position: 3-256
Cow position: chr23:19450952-19451204 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 182
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 30, 22

Conread position: 3-319
Cow position: chr23:16614598-16614281 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 221

Conread position: 3-359
Cow position: chr23:7369369-7369719 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 36

Conread position: 3-538
Cow position: chr23:3706959-3707506 (view UCSC Genome Browser custom track)
Alignm length: 551
Alignm identity: 392
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 190

Conread position: 5-275
Cow position: chr23:15219062-15218789 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 179

Conread position: 6-297
Cow position: chr23:2717235-2717526 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 184, 121

Conread position: 6-368
Cow position: chr23:4639780-4639422 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 190, 144

Conread position: 6-411
Cow position: chr23:28078494-28078890 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 277
Alignm E-value: 7.9874e-44
Alignm gaps (pig, cow): 171, 57

Conread position: 6-516
Cow position: chr23:1956744-1957235 (view UCSC Genome Browser custom track)
Alignm length: 520
Alignm identity: 380
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 115

Conread position: 6-552
Cow position: chr23:965654-965104 (view UCSC Genome Browser custom track)
Alignm length: 559
Alignm identity: 410
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 322

Conread position: 6-552
Cow position: chr23:2026237-2025689 (view UCSC Genome Browser custom track)
Alignm length: 557
Alignm identity: 426
Alignm E-value: 0
Alignm gaps (pig, cow): 265, 187

Conread position: 6-552
Cow position: chr23:2576267-2576800 (view UCSC Genome Browser custom track)
Alignm length: 558
Alignm identity: 415
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 290

Conread position: 6-552
Cow position: chr23:2758729-2759292 (view UCSC Genome Browser custom track)
Alignm length: 566
Alignm identity: 421
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 178

Conread position: 6-552
Cow position: chr23:4817863-4818418 (view UCSC Genome Browser custom track)
Alignm length: 560
Alignm identity: 425
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 101

Conread position: 6-552
Cow position: chr23:4889525-4890081 (view UCSC Genome Browser custom track)
Alignm length: 558
Alignm identity: 427
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 187

Conread position: 6-552
Cow position: chr23:11779625-11780174 (view UCSC Genome Browser custom track)
Alignm length: 560
Alignm identity: 419
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 190

Conread position: 6-552
Cow position: chr23:14964202-14963659 (view UCSC Genome Browser custom track)
Alignm length: 555
Alignm identity: 404
Alignm E-value: 0
Alignm gaps (pig, cow): 265, 187

Conread position: 6-552
Cow position: chr23:15526410-15526968 (view UCSC Genome Browser custom track)
Alignm length: 567
Alignm identity: 430
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 190

Conread position: 6-552
Cow position: chr23:16498387-16497853 (view UCSC Genome Browser custom track)
Alignm length: 555
Alignm identity: 414
Alignm E-value: 0
Alignm gaps (pig, cow): 264, 121

Conread position: 6-552
Cow position: chr23:20155377-20154835 (view UCSC Genome Browser custom track)
Alignm length: 556
Alignm identity: 403
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 287

Conread position: 6-552
Cow position: chr23:36030533-36029987 (view UCSC Genome Browser custom track)
Alignm length: 556
Alignm identity: 407
Alignm E-value: 0
Alignm gaps (pig, cow): 188, 175

Conread position: 9-552
Cow position: chr23:3880237-3879695 (view UCSC Genome Browser custom track)
Alignm length: 555
Alignm identity: 404
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 97

Conread position: 9-552
Cow position: chr23:15177917-15178463 (view UCSC Genome Browser custom track)
Alignm length: 558
Alignm identity: 420
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 211

Conread position: 9-552
Cow position: chr23:19490383-19490946 (view UCSC Genome Browser custom track)
Alignm length: 565
Alignm identity: 415
Alignm E-value: 0
Alignm gaps (pig, cow): 172, 513

Conread position: 9-552
Cow position: chr23:27400352-27400918 (view UCSC Genome Browser custom track)
Alignm length: 568
Alignm identity: 425
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 516

Conread position: 10-552
Cow position: chr23:5739510-5738968 (view UCSC Genome Browser custom track)
Alignm length: 553
Alignm identity: 392
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 110

Conread position: 11-552
Cow position: chr23:38581573-38582088 (view UCSC Genome Browser custom track)
Alignm length: 550
Alignm identity: 405
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 154

Conread position: 12-552
Cow position: chr23:15876713-15876173 (view UCSC Genome Browser custom track)
Alignm length: 554
Alignm identity: 377
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 88

Conread position: 12-552
Cow position: chr23:22146450-22145915 (view UCSC Genome Browser custom track)
Alignm length: 550
Alignm identity: 404
Alignm E-value: 0
Alignm gaps (pig, cow): 259, 133

Conread position: 21-459
Cow position: chr23:26159871-26159410 (view UCSC Genome Browser custom track)
Alignm length: 464
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 346

Conread position: 31-552
Cow position: chr23:13511979-13512496 (view UCSC Genome Browser custom track)
Alignm length: 531
Alignm identity: 390
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 163

Conread position: 39-552
Cow position: chr23:618588-618081 (view UCSC Genome Browser custom track)
Alignm length: 525
Alignm identity: 379
Alignm E-value: 0
Alignm gaps (pig, cow): 238, 146

Conread position: 47-552
Cow position: chr23:1023091-1022565 (view UCSC Genome Browser custom track)
Alignm length: 532
Alignm identity: 398
Alignm E-value: 0
Alignm gaps (pig, cow): 138, 95

Conread position: 50-552
Cow position: chr23:2794368-2793866 (view UCSC Genome Browser custom track)
Alignm length: 512
Alignm identity: 377
Alignm E-value: 0
Alignm gaps (pig, cow): 156, 127

Conread position: 105-552
Cow position: chr23:31649099-31648636 (view UCSC Genome Browser custom track)
Alignm length: 473
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 312

Conread position: 138-480
Cow position: chr23:22167646-22167990 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 78

Conread position: 159-552
Cow position: chr23:14923303-14922903 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 122, 33

Conread position: 163-433
Cow position: chr23:22943148-22942876 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 189
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 36, 25

Conread position: 175-552
Cow position: chr23:14777948-14777567 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 85

Conread position: 177-552
Cow position: chr23:14972961-14972578 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 22

Conread position: 188-552
Cow position: chr23:28218441-28218816 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 0

Conread position: 216-552
Cow position: chr23:37716559-37716896 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 234
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 147, 6

Conread position: 266-552
Cow position: chr23:19451249-19451538 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 202
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 7, 204

Conread position: 286-552
Cow position: chr23:21822157-21821899 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 196
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 18, 58

Conread position: 291-552
Cow position: chr23:16054904-16055166 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 110

Conread position: 311-552
Cow position: chr23:11714723-11714475 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 176
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 59, 0

Conread position: 321-552
Cow position: chr23:4513626-4513875 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 190
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 49, 226

Conread position: 328-552
Cow position: chr23:16614011-16613782 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 173
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 50, 0

Conread position: 421-552
Cow position: chr23:22167907-22168037 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 104
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 43, 9

Conread position: 447-552
Cow position: chr23:38579005-38579105 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 91
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 17, 61

Conread position: 1-175
Cow position: chr24:29183073-29183250 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 142
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 37, 0

Conread position: 1-209
Cow position: chr24:27147633-27147843 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 163
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 37, 66

Conread position: 1-210
Cow position: chr24:11866326-11866115 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 166
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 39, 194

Conread position: 1-388
Cow position: chr24:6332772-6332381 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 307

Conread position: 1-551
Cow position: chr24:12238219-12238764 (view UCSC Genome Browser custom track)
Alignm length: 561
Alignm identity: 399
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 128

Conread position: 1-551
Cow position: chr24:14871391-14870849 (view UCSC Genome Browser custom track)
Alignm length: 557
Alignm identity: 383
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 18

Conread position: 1-552
Cow position: chr24:6337308-6337871 (view UCSC Genome Browser custom track)
Alignm length: 576
Alignm identity: 428
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 152

Conread position: 1-552
Cow position: chr24:9544987-9545536 (view UCSC Genome Browser custom track)
Alignm length: 568
Alignm identity: 424
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 78

Conread position: 1-552
Cow position: chr24:12205385-12204859 (view UCSC Genome Browser custom track)
Alignm length: 560
Alignm identity: 374
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 140

Conread position: 1-552
Cow position: chr24:14389620-14389057 (view UCSC Genome Browser custom track)
Alignm length: 575
Alignm identity: 414
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 57

Conread position: 1-552
Cow position: chr24:36558850-36558298 (view UCSC Genome Browser custom track)
Alignm length: 567
Alignm identity: 420
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 192

Conread position: 1-552
Cow position: chr24:38638459-38639007 (view UCSC Genome Browser custom track)
Alignm length: 566
Alignm identity: 431
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 193

Conread position: 2-479
Cow position: chr24:8151342-8150883 (view UCSC Genome Browser custom track)
Alignm length: 483
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 32

Conread position: 2-552
Cow position: chr24:6142018-6142557 (view UCSC Genome Browser custom track)
Alignm length: 559
Alignm identity: 403
Alignm E-value: 0
Alignm gaps (pig, cow): 367, 68

Conread position: 2-552
Cow position: chr24:9091138-9090573 (view UCSC Genome Browser custom track)
Alignm length: 576
Alignm identity: 426
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 13

Conread position: 3-348
Cow position: chr24:6059824-6060169 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 39

Conread position: 3-514
Cow position: chr24:7090044-7089530 (view UCSC Genome Browser custom track)
Alignm length: 528
Alignm identity: 397
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 128

Conread position: 3-527
Cow position: chr24:6129759-6130276 (view UCSC Genome Browser custom track)
Alignm length: 536
Alignm identity: 403
Alignm E-value: 0
Alignm gaps (pig, cow): 194, 39

Conread position: 3-552
Cow position: chr24:5992303-5991745 (view UCSC Genome Browser custom track)
Alignm length: 560
Alignm identity: 402
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 179

Conread position: 3-552
Cow position: chr24:6435403-6435964 (view UCSC Genome Browser custom track)
Alignm length: 565
Alignm identity: 408
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 132

Conread position: 3-552
Cow position: chr24:12699892-12699343 (view UCSC Genome Browser custom track)
Alignm length: 564
Alignm identity: 392
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 201

Conread position: 3-552
Cow position: chr24:19702409-19702975 (view UCSC Genome Browser custom track)
Alignm length: 575
Alignm identity: 421
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 114

Conread position: 3-552
Cow position: chr24:29305396-29304832 (view UCSC Genome Browser custom track)
Alignm length: 565
Alignm identity: 397
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 0

Conread position: 5-543
Cow position: chr24:16876271-16875734 (view UCSC Genome Browser custom track)
Alignm length: 550
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 299

Conread position: 6-270
Cow position: chr24:37200081-37199818 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 186
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 27, 31

Conread position: 6-368
Cow position: chr24:12129140-12128772 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 128

Conread position: 6-440
Cow position: chr24:17696055-17695612 (view UCSC Genome Browser custom track)
Alignm length: 445
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 190

Conread position: 6-467
Cow position: chr24:22972018-22972485 (view UCSC Genome Browser custom track)
Alignm length: 471
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 190

Conread position: 6-485
Cow position: chr24:14754599-14755092 (view UCSC Genome Browser custom track)
Alignm length: 502
Alignm identity: 361
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 397

Conread position: 6-537
Cow position: chr24:12334831-12334285 (view UCSC Genome Browser custom track)
Alignm length: 548
Alignm identity: 390
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 195

Conread position: 6-538
Cow position: chr24:4414604-4414066 (view UCSC Genome Browser custom track)
Alignm length: 546
Alignm identity: 413
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 72

Conread position: 6-551
Cow position: chr24:19834319-19834884 (view UCSC Genome Browser custom track)
Alignm length: 567
Alignm identity: 421
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 193

Conread position: 6-552
Cow position: chr24:6406957-6407516 (view UCSC Genome Browser custom track)
Alignm length: 564
Alignm identity: 430
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 296

Conread position: 6-552
Cow position: chr24:12087134-12087680 (view UCSC Genome Browser custom track)
Alignm length: 557
Alignm identity: 424
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 15

Conread position: 6-552
Cow position: chr24:16097481-16098007 (view UCSC Genome Browser custom track)
Alignm length: 557
Alignm identity: 372
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 114

Conread position: 6-552
Cow position: chr24:29188218-29188775 (view UCSC Genome Browser custom track)
Alignm length: 560
Alignm identity: 436
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 190

Conread position: 6-552
Cow position: chr24:33934300-33934869 (view UCSC Genome Browser custom track)
Alignm length: 571
Alignm identity: 409
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 524

Conread position: 9-552
Cow position: chr24:147679-147131 (view UCSC Genome Browser custom track)
Alignm length: 559
Alignm identity: 429
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 138

Conread position: 13-291
Cow position: chr24:36709299-36709582 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 211
Alignm E-value: 7.9874e-44
Alignm gaps (pig, cow): 31, 177

Conread position: 15-478
Cow position: chr24:17321640-17322114 (view UCSC Genome Browser custom track)
Alignm length: 481
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 344

Conread position: 39-514
Cow position: chr24:12109742-12109259 (view UCSC Genome Browser custom track)
Alignm length: 490
Alignm identity: 348
Alignm E-value: 0
Alignm gaps (pig, cow): 155, 182

Conread position: 39-534
Cow position: chr24:12150350-12149853 (view UCSC Genome Browser custom track)
Alignm length: 507
Alignm identity: 369
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 172

Conread position: 39-552
Cow position: chr24:6659531-6659017 (view UCSC Genome Browser custom track)
Alignm length: 524
Alignm identity: 385
Alignm E-value: 0
Alignm gaps (pig, cow): 160, 64

Conread position: 39-552
Cow position: chr24:13044668-13044147 (view UCSC Genome Browser custom track)
Alignm length: 534
Alignm identity: 387
Alignm E-value: 0
Alignm gaps (pig, cow): 330, 153

Conread position: 39-552
Cow position: chr24:13189135-13189660 (view UCSC Genome Browser custom track)
Alignm length: 537
Alignm identity: 383
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 277

Conread position: 47-551
Cow position: chr24:6505853-6505368 (view UCSC Genome Browser custom track)
Alignm length: 510
Alignm identity: 314
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 155, 128

Conread position: 67-521
Cow position: chr24:1450421-1450861 (view UCSC Genome Browser custom track)
Alignm length: 464
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 32

Conread position: 71-552
Cow position: chr24:6353157-6353614 (view UCSC Genome Browser custom track)
Alignm length: 486
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 296, 24

Conread position: 87-489
Cow position: chr24:6668795-6668407 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 184, 46

Conread position: 103-546
Cow position: chr24:35869528-35869095 (view UCSC Genome Browser custom track)
Alignm length: 450
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 258, 110

Conread position: 120-359
Cow position: chr24:43810000-43810234 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 160
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 53, 0

Conread position: 141-552
Cow position: chr24:14383575-14383155 (view UCSC Genome Browser custom track)
Alignm length: 429
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 33

Conread position: 170-552
Cow position: chr24:13179926-13179538 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 133

Conread position: 197-552
Cow position: chr24:12163060-12163424 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 342

Conread position: 201-543
Cow position: chr24:36480832-36480497 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 225
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 63, 194

Conread position: 215-552
Cow position: chr24:19640819-19641165 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 31

Conread position: 235-552
Cow position: chr24:37199735-37199421 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 209
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 53, 87

Conread position: 285-552
Cow position: chr24:16561111-16560833 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 213
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 85, 14

Conread position: 289-552
Cow position: chr24:38585908-38585637 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 199
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 80, 0

Conread position: 347-552
Cow position: chr24:25437564-25437764 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 167
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 23, 118

Conread position: 368-552
Cow position: chr24:10222874-10222693 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 144
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 148, 95

Conread position: 375-552
Cow position: chr24:6324049-6323874 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 143
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 17, 130

Conread position: 1-334
Cow position: chr25:27525255-27524925 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 104

Conread position: 1-552
Cow position: chr25:17559668-17559120 (view UCSC Genome Browser custom track)
Alignm length: 562
Alignm identity: 409
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 243

Conread position: 1-552
Cow position: chr25:18273886-18273328 (view UCSC Genome Browser custom track)
Alignm length: 562
Alignm identity: 435
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 101

Conread position: 1-552
Cow position: chr25:18305034-18305581 (view UCSC Genome Browser custom track)
Alignm length: 559
Alignm identity: 416
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 177

Conread position: 3-319
Cow position: chr25:12758203-12757881 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 167

Conread position: 3-552
Cow position: chr25:17588671-17588114 (view UCSC Genome Browser custom track)
Alignm length: 561
Alignm identity: 415
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 190

Conread position: 3-552
Cow position: chr25:27021699-27021147 (view UCSC Genome Browser custom track)
Alignm length: 561
Alignm identity: 412
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 188

Conread position: 5-546
Cow position: chr25:20774487-20773934 (view UCSC Genome Browser custom track)
Alignm length: 559
Alignm identity: 395
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 186

Conread position: 6-230
Cow position: chr25:26880075-26880296 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 167
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 175, 0

Conread position: 6-527
Cow position: chr25:13781922-13782449 (view UCSC Genome Browser custom track)
Alignm length: 535
Alignm identity: 396
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 187

Conread position: 6-545
Cow position: chr25:22148428-22148970 (view UCSC Genome Browser custom track)
Alignm length: 554
Alignm identity: 421
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 190

Conread position: 6-551
Cow position: chr25:25507592-25508148 (view UCSC Genome Browser custom track)
Alignm length: 559
Alignm identity: 419
Alignm E-value: 0
Alignm gaps (pig, cow): 190, 184

Conread position: 6-552
Cow position: chr25:18888855-18888301 (view UCSC Genome Browser custom track)
Alignm length: 561
Alignm identity: 420
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 149

Conread position: 6-552
Cow position: chr25:20630518-20631067 (view UCSC Genome Browser custom track)
Alignm length: 563
Alignm identity: 413
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 236

Conread position: 6-552
Cow position: chr25:24659311-24658770 (view UCSC Genome Browser custom track)
Alignm length: 556
Alignm identity: 419
Alignm E-value: 0
Alignm gaps (pig, cow): 265, 174

Conread position: 6-552
Cow position: chr25:34346126-34345553 (view UCSC Genome Browser custom track)
Alignm length: 576
Alignm identity: 426
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 245

Conread position: 7-358
Cow position: chr25:39557545-39557199 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 109, 130

Conread position: 9-552
Cow position: chr25:12941778-12941228 (view UCSC Genome Browser custom track)
Alignm length: 555
Alignm identity: 423
Alignm E-value: 0
Alignm gaps (pig, cow): 187, 172

Conread position: 44-541
Cow position: chr25:26928232-26928731 (view UCSC Genome Browser custom track)
Alignm length: 507
Alignm identity: 355
Alignm E-value: 0
Alignm gaps (pig, cow): 326, 197

Conread position: 81-552
Cow position: chr25:11931811-11931348 (view UCSC Genome Browser custom track)
Alignm length: 478
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 190, 30

Conread position: 84-289
Cow position: chr25:23848704-23848498 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 143
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 114, 30

Conread position: 134-424
Cow position: chr25:34506670-34506375 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 137, 59

Conread position: 135-552
Cow position: chr25:34677024-34676592 (view UCSC Genome Browser custom track)
Alignm length: 438
Alignm identity: 280
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 52, 129

Conread position: 140-552
Cow position: chr25:32988232-32987814 (view UCSC Genome Browser custom track)
Alignm length: 423
Alignm identity: 266
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 131, 39

Conread position: 151-552
Cow position: chr25:17655474-17655875 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 43

Conread position: 171-542
Cow position: chr25:26899738-26900117 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 279

Conread position: 177-552
Cow position: chr25:11041427-11041798 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 284

Conread position: 177-552
Cow position: chr25:14957389-14957012 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 327

Conread position: 201-542
Cow position: chr25:33576099-33575749 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 105

Conread position: 266-552
Cow position: chr25:21902191-21902478 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 107, 41

Conread position: 333-552
Cow position: chr25:27523379-27523165 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 178
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 37, 65

Conread position: 370-536
Cow position: chr25:12757871-12757705 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 122
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 88, 60

Conread position: 1-484
Cow position: chr26:9844001-9843512 (view UCSC Genome Browser custom track)
Alignm length: 498
Alignm identity: 361
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 104

Conread position: 1-552
Cow position: chr26:4604280-4603708 (view UCSC Genome Browser custom track)
Alignm length: 590
Alignm identity: 432
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 91

Conread position: 2-552
Cow position: chr26:21825783-21825229 (view UCSC Genome Browser custom track)
Alignm length: 570
Alignm identity: 434
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 115

Conread position: 3-552
Cow position: chr26:8919734-8920294 (view UCSC Genome Browser custom track)
Alignm length: 563
Alignm identity: 400
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 201

Conread position: 5-501
Cow position: chr26:30783654-30784166 (view UCSC Genome Browser custom track)
Alignm length: 517
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 196

Conread position: 5-552
Cow position: chr26:12587661-12587100 (view UCSC Genome Browser custom track)
Alignm length: 563
Alignm identity: 408
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 364

Conread position: 6-480
Cow position: chr26:20264599-20265054 (view UCSC Genome Browser custom track)
Alignm length: 483
Alignm identity: 325
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 30, 92

Conread position: 6-552
Cow position: chr26:6848537-6847989 (view UCSC Genome Browser custom track)
Alignm length: 557
Alignm identity: 421
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 190

Conread position: 6-552
Cow position: chr26:9561874-9561326 (view UCSC Genome Browser custom track)
Alignm length: 565
Alignm identity: 423
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 204

Conread position: 6-552
Cow position: chr26:14894850-14895400 (view UCSC Genome Browser custom track)
Alignm length: 558
Alignm identity: 434
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 14

Conread position: 6-552
Cow position: chr26:19350607-19350060 (view UCSC Genome Browser custom track)
Alignm length: 558
Alignm identity: 423
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 115

Conread position: 6-552
Cow position: chr26:30588461-30587916 (view UCSC Genome Browser custom track)
Alignm length: 563
Alignm identity: 409
Alignm E-value: 0
Alignm gaps (pig, cow): 188, 151

Conread position: 10-552
Cow position: chr26:17396002-17395456 (view UCSC Genome Browser custom track)
Alignm length: 554
Alignm identity: 417
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 181

Conread position: 62-552
Cow position: chr26:6806121-6805610 (view UCSC Genome Browser custom track)
Alignm length: 522
Alignm identity: 387
Alignm E-value: 0
Alignm gaps (pig, cow): 177, 88

Conread position: 69-552
Cow position: chr26:17325041-17325534 (view UCSC Genome Browser custom track)
Alignm length: 499
Alignm identity: 368
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 13

Conread position: 105-552
Cow position: chr26:27000128-26999684 (view UCSC Genome Browser custom track)
Alignm length: 454
Alignm identity: 288
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 143, 37

Conread position: 114-552
Cow position: chr26:5676124-5676570 (view UCSC Genome Browser custom track)
Alignm length: 452
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 79

Conread position: 140-514
Cow position: chr26:8086207-8086577 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 73

Conread position: 155-552
Cow position: chr26:4328393-4327994 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 35

Conread position: 216-552
Cow position: chr26:35082261-35082609 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 231
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 45, 82

Conread position: 255-552
Cow position: chr26:34012829-34013128 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 179

Conread position: 301-552
Cow position: chr26:8871031-8871288 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 181
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 69, 0

Conread position: 3-352
Cow position: chr27:11095644-11095995 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 192

Conread position: 3-527
Cow position: chr27:28892437-28892968 (view UCSC Genome Browser custom track)
Alignm length: 537
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 105

Conread position: 3-552
Cow position: chr27:2377367-2377907 (view UCSC Genome Browser custom track)
Alignm length: 564
Alignm identity: 376
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 74

Conread position: 3-552
Cow position: chr27:16033552-16033007 (view UCSC Genome Browser custom track)
Alignm length: 568
Alignm identity: 395
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 114

Conread position: 6-322
Cow position: chr27:15036744-15036431 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 53

Conread position: 6-489
Cow position: chr27:14459606-14459108 (view UCSC Genome Browser custom track)
Alignm length: 500
Alignm identity: 382
Alignm E-value: 0
Alignm gaps (pig, cow): 171, 211

Conread position: 6-549
Cow position: chr27:1210199-1210747 (view UCSC Genome Browser custom track)
Alignm length: 555
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 189

Conread position: 6-552
Cow position: chr27:3234698-3234128 (view UCSC Genome Browser custom track)
Alignm length: 571
Alignm identity: 425
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 0

Conread position: 6-552
Cow position: chr27:9992354-9991813 (view UCSC Genome Browser custom track)
Alignm length: 554
Alignm identity: 417
Alignm E-value: 0
Alignm gaps (pig, cow): 265, 187

Conread position: 6-552
Cow position: chr27:13898170-13898711 (view UCSC Genome Browser custom track)
Alignm length: 555
Alignm identity: 408
Alignm E-value: 0
Alignm gaps (pig, cow): 265, 33

Conread position: 6-552
Cow position: chr27:15636504-15635947 (view UCSC Genome Browser custom track)
Alignm length: 560
Alignm identity: 424
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 190

Conread position: 6-552
Cow position: chr27:28079281-28079817 (view UCSC Genome Browser custom track)
Alignm length: 556
Alignm identity: 398
Alignm E-value: 0
Alignm gaps (pig, cow): 265, 50

Conread position: 9-552
Cow position: chr27:9330575-9331130 (view UCSC Genome Browser custom track)
Alignm length: 561
Alignm identity: 432
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 292

Conread position: 10-281
Cow position: chr27:23336008-23336289 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 116

Conread position: 10-552
Cow position: chr27:26325920-26326457 (view UCSC Genome Browser custom track)
Alignm length: 551
Alignm identity: 407
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 186

Conread position: 43-552
Cow position: chr27:1677688-1677175 (view UCSC Genome Browser custom track)
Alignm length: 528
Alignm identity: 382
Alignm E-value: 0
Alignm gaps (pig, cow): 228, 147

Conread position: 50-552
Cow position: chr27:16612061-16611569 (view UCSC Genome Browser custom track)
Alignm length: 511
Alignm identity: 326
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 6, 56

Conread position: 71-552
Cow position: chr27:27663909-27664397 (view UCSC Genome Browser custom track)
Alignm length: 492
Alignm identity: 371
Alignm E-value: 0
Alignm gaps (pig, cow): 123, 397

Conread position: 78-323
Cow position: chr27:6010258-6010497 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 177
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 193, 39

Conread position: 109-526
Cow position: chr27:21286944-21286517 (view UCSC Genome Browser custom track)
Alignm length: 431
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 161, 70

Conread position: 131-317
Cow position: chr27:246175-246361 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 137
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 72, 48

Conread position: 144-354
Cow position: chr27:12747817-12748025 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 164
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 55, 96

Conread position: 201-526
Cow position: chr27:23292318-23292644 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 111

Conread position: 207-552
Cow position: chr27:15275018-15274670 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 109

Conread position: 254-552
Cow position: chr27:21335031-21335325 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 197
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 76, 55

Conread position: 308-552
Cow position: chr27:12748186-12748433 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 183
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 14, 35

Conread position: 403-552
Cow position: chr27:16264598-16264749 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 122
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 25, 129

Conread position: 1-132
Cow position: chr28:2085386-2085517 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 105
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 1-282
Cow position: chr28:3019834-3019538 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 281

Conread position: 1-387
Cow position: chr28:10072158-10072550 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 195

Conread position: 1-448
Cow position: chr28:5814258-5814691 (view UCSC Genome Browser custom track)
Alignm length: 457
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 42

Conread position: 1-542
Cow position: chr28:8720063-8719529 (view UCSC Genome Browser custom track)
Alignm length: 553
Alignm identity: 426
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 317

Conread position: 1-549
Cow position: chr28:21360368-21360929 (view UCSC Genome Browser custom track)
Alignm length: 574
Alignm identity: 437
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 25

Conread position: 1-551
Cow position: chr28:5799180-5799730 (view UCSC Genome Browser custom track)
Alignm length: 563
Alignm identity: 431
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 196

Conread position: 1-552
Cow position: chr28:1386512-1385965 (view UCSC Genome Browser custom track)
Alignm length: 559
Alignm identity: 417
Alignm E-value: 0
Alignm gaps (pig, cow): 228, 189

Conread position: 1-552
Cow position: chr28:10646516-10645990 (view UCSC Genome Browser custom track)
Alignm length: 565
Alignm identity: 409
Alignm E-value: 0
Alignm gaps (pig, cow): 181, 41

Conread position: 1-552
Cow position: chr28:24668503-24669042 (view UCSC Genome Browser custom track)
Alignm length: 559
Alignm identity: 427
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 52

Conread position: 2-298
Cow position: chr28:15684122-15684428 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 0

Conread position: 2-471
Cow position: chr28:7811333-7811781 (view UCSC Genome Browser custom track)
Alignm length: 476
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 188

Conread position: 2-552
Cow position: chr28:22260267-22259710 (view UCSC Genome Browser custom track)
Alignm length: 563
Alignm identity: 424
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 194

Conread position: 3-368
Cow position: chr28:29761045-29760676 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 23

Conread position: 3-406
Cow position: chr28:14751429-14751840 (view UCSC Genome Browser custom track)
Alignm length: 413
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 192

Conread position: 3-461
Cow position: chr28:24884092-24883634 (view UCSC Genome Browser custom track)
Alignm length: 470
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 266

Conread position: 3-552
Cow position: chr28:484708-484153 (view UCSC Genome Browser custom track)
Alignm length: 563
Alignm identity: 405
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 13

Conread position: 4-356
Cow position: chr28:2988197-2987846 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 208

Conread position: 5-552
Cow position: chr28:8379943-8380477 (view UCSC Genome Browser custom track)
Alignm length: 560
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 376

Conread position: 5-552
Cow position: chr28:17666419-17665867 (view UCSC Genome Browser custom track)
Alignm length: 560
Alignm identity: 421
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 191

Conread position: 6-306
Cow position: chr28:1217265-1216959 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 188, 0

Conread position: 6-322
Cow position: chr28:5113408-5113090 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 178

Conread position: 6-356
Cow position: chr28:10581199-10580847 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 265, 187

Conread position: 6-524
Cow position: chr28:1813975-1813464 (view UCSC Genome Browser custom track)
Alignm length: 524
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 186

Conread position: 6-531
Cow position: chr28:7741339-7741864 (view UCSC Genome Browser custom track)
Alignm length: 535
Alignm identity: 399
Alignm E-value: 0
Alignm gaps (pig, cow): 190, 175

Conread position: 6-552
Cow position: chr28:783561-784103 (view UCSC Genome Browser custom track)
Alignm length: 563
Alignm identity: 413
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 151

Conread position: 6-552
Cow position: chr28:1166988-1166449 (view UCSC Genome Browser custom track)
Alignm length: 553
Alignm identity: 413
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 78

Conread position: 6-552
Cow position: chr28:1505758-1506307 (view UCSC Genome Browser custom track)
Alignm length: 559
Alignm identity: 427
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 14

Conread position: 6-552
Cow position: chr28:3191367-3190812 (view UCSC Genome Browser custom track)
Alignm length: 559
Alignm identity: 421
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 190

Conread position: 6-552
Cow position: chr28:5567043-5567573 (view UCSC Genome Browser custom track)
Alignm length: 558
Alignm identity: 407
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 186

Conread position: 6-552
Cow position: chr28:5938373-5938928 (view UCSC Genome Browser custom track)
Alignm length: 561
Alignm identity: 424
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 190

Conread position: 6-552
Cow position: chr28:7002884-7003438 (view UCSC Genome Browser custom track)
Alignm length: 559
Alignm identity: 423
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 190

Conread position: 6-552
Cow position: chr28:12151194-12151770 (view UCSC Genome Browser custom track)
Alignm length: 580
Alignm identity: 429
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 79

Conread position: 6-552
Cow position: chr28:13460862-13461420 (view UCSC Genome Browser custom track)
Alignm length: 564
Alignm identity: 425
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 266

Conread position: 6-552
Cow position: chr28:14704499-14703945 (view UCSC Genome Browser custom track)
Alignm length: 559
Alignm identity: 421
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 190

Conread position: 6-552
Cow position: chr28:18519561-18519007 (view UCSC Genome Browser custom track)
Alignm length: 560
Alignm identity: 425
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 178

Conread position: 6-552
Cow position: chr28:26425367-26424818 (view UCSC Genome Browser custom track)
Alignm length: 559
Alignm identity: 424
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 190

Conread position: 6-552
Cow position: chr28:29820884-29821439 (view UCSC Genome Browser custom track)
Alignm length: 559
Alignm identity: 414
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 190

Conread position: 6-552
Cow position: chr28:32791487-32790951 (view UCSC Genome Browser custom track)
Alignm length: 557
Alignm identity: 425
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 126

Conread position: 8-508
Cow position: chr28:10460713-10460210 (view UCSC Genome Browser custom track)
Alignm length: 511
Alignm identity: 358
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 88

Conread position: 9-552
Cow position: chr28:12409334-12408785 (view UCSC Genome Browser custom track)
Alignm length: 561
Alignm identity: 407
Alignm E-value: 0
Alignm gaps (pig, cow): 187, 20

Conread position: 9-552
Cow position: chr28:18146838-18146300 (view UCSC Genome Browser custom track)
Alignm length: 555
Alignm identity: 401
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 19

Conread position: 11-550
Cow position: chr28:5765635-5766169 (view UCSC Genome Browser custom track)
Alignm length: 562
Alignm identity: 411
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 169

Conread position: 12-552
Cow position: chr28:5750809-5750259 (view UCSC Genome Browser custom track)
Alignm length: 554
Alignm identity: 414
Alignm E-value: 0
Alignm gaps (pig, cow): 259, 9

Conread position: 21-544
Cow position: chr28:12180171-12179664 (view UCSC Genome Browser custom track)
Alignm length: 533
Alignm identity: 342
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 20, 113

Conread position: 39-486
Cow position: chr28:27678475-27678905 (view UCSC Genome Browser custom track)
Alignm length: 452
Alignm identity: 295
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 232, 17

Conread position: 45-552
Cow position: chr28:15035186-15034671 (view UCSC Genome Browser custom track)
Alignm length: 528
Alignm identity: 389
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 220

Conread position: 71-444
Cow position: chr28:10470464-10470839 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 73

Conread position: 81-522
Cow position: chr28:7788927-7788491 (view UCSC Genome Browser custom track)
Alignm length: 450
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 65

Conread position: 90-531
Cow position: chr28:10496558-10496113 (view UCSC Genome Browser custom track)
Alignm length: 452
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 147

Conread position: 168-552
Cow position: chr28:2085513-2085905 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 41

Conread position: 179-552
Cow position: chr28:21566516-21566898 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 218

Conread position: 182-550
Cow position: chr28:6778877-6778500 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 0

Conread position: 184-525
Cow position: chr28:22232209-22231859 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 9

Conread position: 186-552
Cow position: chr28:17381791-17381431 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 272
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 13, 119

Conread position: 263-456
Cow position: chr28:698392-698591 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 149
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 13, 166

Conread position: 271-552
Cow position: chr28:12648526-12648234 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 215
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 74, 28

Conread position: 317-552
Cow position: chr28:1216634-1216391 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 176
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 53, 88

Conread position: 384-549
Cow position: chr28:6786536-6786695 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 127
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 81, 53

Conread position: 431-552
Cow position: chr28:10470984-10471105 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 95
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 35, 24

Conread position: 1-297
Cow position: chr29:28576522-28576233 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 205
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 260, 125

Conread position: 1-545
Cow position: chr29:23976972-23977526 (view UCSC Genome Browser custom track)
Alignm length: 558
Alignm identity: 427
Alignm E-value: 0
Alignm gaps (pig, cow): 180, 287

Conread position: 1-549
Cow position: chr29:8664363-8664914 (view UCSC Genome Browser custom track)
Alignm length: 562
Alignm identity: 412
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 17

Conread position: 1-549
Cow position: chr29:14085280-14084727 (view UCSC Genome Browser custom track)
Alignm length: 562
Alignm identity: 436
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 272

Conread position: 1-552
Cow position: chr29:5981866-5981304 (view UCSC Genome Browser custom track)
Alignm length: 567
Alignm identity: 437
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 193

Conread position: 1-552
Cow position: chr29:39078857-39078307 (view UCSC Genome Browser custom track)
Alignm length: 564
Alignm identity: 420
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 195

Conread position: 2-552
Cow position: chr29:21426175-21425614 (view UCSC Genome Browser custom track)
Alignm length: 571
Alignm identity: 437
Alignm E-value: 0
Alignm gaps (pig, cow): 151, 91

Conread position: 3-481
Cow position: chr29:35297682-35298154 (view UCSC Genome Browser custom track)
Alignm length: 490
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 202

Conread position: 3-546
Cow position: chr29:609772-609246 (view UCSC Genome Browser custom track)
Alignm length: 551
Alignm identity: 388
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 48

Conread position: 3-552
Cow position: chr29:13582931-13583485 (view UCSC Genome Browser custom track)
Alignm length: 560
Alignm identity: 398
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 22

Conread position: 3-552
Cow position: chr29:14448759-14449283 (view UCSC Genome Browser custom track)
Alignm length: 565
Alignm identity: 394
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 13

Conread position: 3-552
Cow position: chr29:32558904-32558347 (view UCSC Genome Browser custom track)
Alignm length: 569
Alignm identity: 395
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 195

Conread position: 4-481
Cow position: chr29:2949494-2949025 (view UCSC Genome Browser custom track)
Alignm length: 493
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 289, 26

Conread position: 4-552
Cow position: chr29:32891647-32892186 (view UCSC Genome Browser custom track)
Alignm length: 567
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 103

Conread position: 5-472
Cow position: chr29:39368727-39369187 (view UCSC Genome Browser custom track)
Alignm length: 481
Alignm identity: 315
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 39, 62

Conread position: 5-530
Cow position: chr29:32287053-32287572 (view UCSC Genome Browser custom track)
Alignm length: 541
Alignm identity: 355
Alignm E-value: 0
Alignm gaps (pig, cow): 182, 34

Conread position: 6-132
Cow position: chr29:14216822-14216948 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 106
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 6-237
Cow position: chr29:2840524-2840288 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 182
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 0

Conread position: 6-322
Cow position: chr29:6265421-6265095 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 0

Conread position: 6-502
Cow position: chr29:43323413-43323910 (view UCSC Genome Browser custom track)
Alignm length: 500
Alignm identity: 372
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 276

Conread position: 6-516
Cow position: chr29:7430365-7429842 (view UCSC Genome Browser custom track)
Alignm length: 527
Alignm identity: 397
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 153

Conread position: 6-516
Cow position: chr29:10823120-10822611 (view UCSC Genome Browser custom track)
Alignm length: 522
Alignm identity: 398
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 65

Conread position: 6-543
Cow position: chr29:8774455-8773908 (view UCSC Genome Browser custom track)
Alignm length: 559
Alignm identity: 372
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 113

Conread position: 6-550
Cow position: chr29:19654485-19655026 (view UCSC Genome Browser custom track)
Alignm length: 553
Alignm identity: 421
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 146

Conread position: 6-551
Cow position: chr29:25931687-25931123 (view UCSC Genome Browser custom track)
Alignm length: 568
Alignm identity: 429
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 453

Conread position: 6-552
Cow position: chr29:2100702-2101243 (view UCSC Genome Browser custom track)
Alignm length: 557
Alignm identity: 412
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 46

Conread position: 6-552
Cow position: chr29:10647393-10646846 (view UCSC Genome Browser custom track)
Alignm length: 559
Alignm identity: 414
Alignm E-value: 0
Alignm gaps (pig, cow): 265, 187

Conread position: 6-552
Cow position: chr29:14210715-14210144 (view UCSC Genome Browser custom track)
Alignm length: 578
Alignm identity: 417
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 184

Conread position: 6-552
Cow position: chr29:15997812-15997246 (view UCSC Genome Browser custom track)
Alignm length: 569
Alignm identity: 411
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 453

Conread position: 6-552
Cow position: chr29:19622430-19621873 (view UCSC Genome Browser custom track)
Alignm length: 560
Alignm identity: 424
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 186

Conread position: 6-552
Cow position: chr29:26163973-26163430 (view UCSC Genome Browser custom track)
Alignm length: 556
Alignm identity: 425
Alignm E-value: 0
Alignm gaps (pig, cow): 265, 133

Conread position: 6-552
Cow position: chr29:32540948-32541505 (view UCSC Genome Browser custom track)
Alignm length: 560
Alignm identity: 413
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 19

Conread position: 6-552
Cow position: chr29:34798951-34798407 (view UCSC Genome Browser custom track)
Alignm length: 555
Alignm identity: 414
Alignm E-value: 0
Alignm gaps (pig, cow): 188, 28

Conread position: 6-552
Cow position: chr29:40502124-40501594 (view UCSC Genome Browser custom track)
Alignm length: 552
Alignm identity: 410
Alignm E-value: 0
Alignm gaps (pig, cow): 190, 182

Conread position: 6-552
Cow position: chr29:45205356-45205915 (view UCSC Genome Browser custom track)
Alignm length: 567
Alignm identity: 426
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 149

Conread position: 6-552
Cow position: chr29:45460577-45461151 (view UCSC Genome Browser custom track)
Alignm length: 576
Alignm identity: 431
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 78

Conread position: 9-481
Cow position: chr29:45586519-45586051 (view UCSC Genome Browser custom track)
Alignm length: 483
Alignm identity: 357
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 182

Conread position: 9-552
Cow position: chr29:14586777-14587323 (view UCSC Genome Browser custom track)
Alignm length: 556
Alignm identity: 423
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 266

Conread position: 10-552
Cow position: chr29:20252022-20252564 (view UCSC Genome Browser custom track)
Alignm length: 554
Alignm identity: 417
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 425

Conread position: 11-552
Cow position: chr29:2747573-2747045 (view UCSC Genome Browser custom track)
Alignm length: 553
Alignm identity: 425
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 149

Conread position: 11-552
Cow position: chr29:13650916-13651442 (view UCSC Genome Browser custom track)
Alignm length: 552
Alignm identity: 389
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 8

Conread position: 18-421
Cow position: chr29:27263029-27262625 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 50

Conread position: 31-302
Cow position: chr29:8061247-8060974 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 187
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 13, 28

Conread position: 39-484
Cow position: chr29:42803300-42803750 (view UCSC Genome Browser custom track)
Alignm length: 455
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 151, 186

Conread position: 45-541
Cow position: chr29:47544-47034 (view UCSC Genome Browser custom track)
Alignm length: 516
Alignm identity: 381
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 138

Conread position: 66-552
Cow position: chr29:2465951-2465449 (view UCSC Genome Browser custom track)
Alignm length: 507
Alignm identity: 357
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 289

Conread position: 86-552
Cow position: chr29:16023506-16023968 (view UCSC Genome Browser custom track)
Alignm length: 471
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 110, 94

Conread position: 130-552
Cow position: chr29:42939219-42938788 (view UCSC Genome Browser custom track)
Alignm length: 432
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 0

Conread position: 156-368
Cow position: chr29:16173228-16173007 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 158
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 105, 34

Conread position: 162-531
Cow position: chr29:18397231-18397604 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 256
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 37, 18

Conread position: 175-552
Cow position: chr29:38207650-38207260 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 30

Conread position: 185-549
Cow position: chr29:3698992-3699354 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 249
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 7, 75

Conread position: 185-549
Cow position: chr29:10849786-10850150 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 248
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 14, 132

Conread position: 213-552
Cow position: chr29:2840277-2839938 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 26

Conread position: 216-546
Cow position: chr29:32804486-32804810 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 54

Conread position: 287-551
Cow position: chr29:9642654-9642384 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 10

Conread position: 321-552
Cow position: chr29:2691336-2691567 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 179
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 49, 109

Conread position: 373-552
Cow position: chr29:12793458-12793629 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 135
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 91, 11

Conread position: 375-552
Cow position: chr29:647052-647218 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 132
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 146, 80

Conread position: 377-552
Cow position: chr29:21431625-21431447 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 127
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 56, 0

Conread position: 400-552
Cow position: chr29:10023082-10022928 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 113
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 63, 0

Conread position: 416-551
Cow position: chr29:27262449-27262311 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 117
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 37, 95

Conread position: 1-188
Cow position: chr3:24589003-24588813 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 149
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 34, 0

Conread position: 1-222
Cow position: chr3:49678565-49678793 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 183
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 35, 139

Conread position: 1-264
Cow position: chr3:15806299-15806565 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 174
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 12, 36

Conread position: 1-273
Cow position: chr3:31420101-31420377 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 192
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 43, 25

Conread position: 1-277
Cow position: chr3:58948379-58948665 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 271

Conread position: 1-489
Cow position: chr3:22853725-22853243 (view UCSC Genome Browser custom track)
Alignm length: 499
Alignm identity: 314
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 42, 180

Conread position: 1-501
Cow position: chr3:64357031-64356530 (view UCSC Genome Browser custom track)
Alignm length: 510
Alignm identity: 401
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 179

Conread position: 1-526
Cow position: chr3:77424398-77424912 (view UCSC Genome Browser custom track)
Alignm length: 541
Alignm identity: 395
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 84

Conread position: 1-549
Cow position: chr3:63002780-63002242 (view UCSC Genome Browser custom track)
Alignm length: 559
Alignm identity: 433
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 196

Conread position: 1-552
Cow position: chr3:2907007-2906449 (view UCSC Genome Browser custom track)
Alignm length: 565
Alignm identity: 439
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 164

Conread position: 1-552
Cow position: chr3:6686573-6687110 (view UCSC Genome Browser custom track)
Alignm length: 554
Alignm identity: 436
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 144

Conread position: 1-552
Cow position: chr3:6877408-6876854 (view UCSC Genome Browser custom track)
Alignm length: 572
Alignm identity: 436
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 82

Conread position: 1-552
Cow position: chr3:29579389-29579949 (view UCSC Genome Browser custom track)
Alignm length: 569
Alignm identity: 413
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 71

Conread position: 1-552
Cow position: chr3:38493999-38494561 (view UCSC Genome Browser custom track)
Alignm length: 564
Alignm identity: 417
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 89

Conread position: 1-552
Cow position: chr3:48229715-48229155 (view UCSC Genome Browser custom track)
Alignm length: 569
Alignm identity: 449
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 78

Conread position: 2-295
Cow position: chr3:50646020-50646315 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 195
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 42, 157

Conread position: 2-391
Cow position: chr3:11198790-11198391 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 241

Conread position: 2-473
Cow position: chr3:19944994-19945476 (view UCSC Genome Browser custom track)
Alignm length: 497
Alignm identity: 363
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 243

Conread position: 2-552
Cow position: chr3:3057595-3058135 (view UCSC Genome Browser custom track)
Alignm length: 578
Alignm identity: 419
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 114

Conread position: 3-277
Cow position: chr3:20381308-20381585 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 192

Conread position: 3-371
Cow position: chr3:50126868-50126474 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 0

Conread position: 3-455
Cow position: chr3:63200379-63200823 (view UCSC Genome Browser custom track)
Alignm length: 463
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 29

Conread position: 3-489
Cow position: chr3:47177507-47177012 (view UCSC Genome Browser custom track)
Alignm length: 498
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 179

Conread position: 3-526
Cow position: chr3:37989651-37990178 (view UCSC Genome Browser custom track)
Alignm length: 541
Alignm identity: 341
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 41, 75

Conread position: 3-550
Cow position: chr3:3523787-3524333 (view UCSC Genome Browser custom track)
Alignm length: 559
Alignm identity: 385
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 208

Conread position: 3-552
Cow position: chr3:19800411-19799852 (view UCSC Genome Browser custom track)
Alignm length: 562
Alignm identity: 405
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 192

Conread position: 3-552
Cow position: chr3:19939658-19940215 (view UCSC Genome Browser custom track)
Alignm length: 568
Alignm identity: 414
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 154

Conread position: 3-552
Cow position: chr3:24346734-24347269 (view UCSC Genome Browser custom track)
Alignm length: 556
Alignm identity: 419
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 163

Conread position: 3-552
Cow position: chr3:37969807-37970366 (view UCSC Genome Browser custom track)
Alignm length: 561
Alignm identity: 412
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 192

Conread position: 3-552
Cow position: chr3:45033513-45034059 (view UCSC Genome Browser custom track)
Alignm length: 561
Alignm identity: 392
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 261

Conread position: 3-552
Cow position: chr3:50916104-50916664 (view UCSC Genome Browser custom track)
Alignm length: 568
Alignm identity: 416
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 164

Conread position: 3-552
Cow position: chr3:56397954-56398506 (view UCSC Genome Browser custom track)
Alignm length: 567
Alignm identity: 400
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 190

Conread position: 4-270
Cow position: chr3:4028939-4029206 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 190

Conread position: 4-516
Cow position: chr3:40342886-40343409 (view UCSC Genome Browser custom track)
Alignm length: 528
Alignm identity: 376
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 234

Conread position: 4-552
Cow position: chr3:48843017-48843576 (view UCSC Genome Browser custom track)
Alignm length: 562
Alignm identity: 407
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 191

Conread position: 5-543
Cow position: chr3:5884311-5884842 (view UCSC Genome Browser custom track)
Alignm length: 549
Alignm identity: 406
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 191

Conread position: 5-550
Cow position: chr3:15181133-15181676 (view UCSC Genome Browser custom track)
Alignm length: 562
Alignm identity: 410
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 114

Conread position: 5-552
Cow position: chr3:64027358-64026815 (view UCSC Genome Browser custom track)
Alignm length: 558
Alignm identity: 389
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 58

Conread position: 6-332
Cow position: chr3:18541372-18541042 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 15

Conread position: 6-402
Cow position: chr3:75040392-75039990 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 178

Conread position: 6-498
Cow position: chr3:45975271-45975764 (view UCSC Genome Browser custom track)
Alignm length: 507
Alignm identity: 369
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 237

Conread position: 6-526
Cow position: chr3:19756180-19755644 (view UCSC Genome Browser custom track)
Alignm length: 542
Alignm identity: 404
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 455

Conread position: 6-541
Cow position: chr3:56339650-56339108 (view UCSC Genome Browser custom track)
Alignm length: 549
Alignm identity: 399
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 293

Conread position: 6-549
Cow position: chr3:30315332-30315866 (view UCSC Genome Browser custom track)
Alignm length: 556
Alignm identity: 402
Alignm E-value: 0
Alignm gaps (pig, cow): 189, 133

Conread position: 6-552
Cow position: chr3:2710100-2709547 (view UCSC Genome Browser custom track)
Alignm length: 561
Alignm identity: 433
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 146

Conread position: 6-552
Cow position: chr3:5953412-5952861 (view UCSC Genome Browser custom track)
Alignm length: 570
Alignm identity: 405
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 162

Conread position: 6-552
Cow position: chr3:10240425-10240973 (view UCSC Genome Browser custom track)
Alignm length: 557
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 464

Conread position: 6-552
Cow position: chr3:21181932-21181373 (view UCSC Genome Browser custom track)
Alignm length: 562
Alignm identity: 434
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 190

Conread position: 6-552
Cow position: chr3:23289566-23289014 (view UCSC Genome Browser custom track)
Alignm length: 561
Alignm identity: 417
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 190

Conread position: 6-552
Cow position: chr3:24445310-24444753 (view UCSC Genome Browser custom track)
Alignm length: 559
Alignm identity: 427
Alignm E-value: 0
Alignm gaps (pig, cow): 175, 511

Conread position: 6-552
Cow position: chr3:40824160-40824712 (view UCSC Genome Browser custom track)
Alignm length: 555
Alignm identity: 422
Alignm E-value: 0
Alignm gaps (pig, cow): 269, 187

Conread position: 6-552
Cow position: chr3:48058586-48058041 (view UCSC Genome Browser custom track)
Alignm length: 561
Alignm identity: 413
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 90

Conread position: 6-552
Cow position: chr3:49544441-49543884 (view UCSC Genome Browser custom track)
Alignm length: 561
Alignm identity: 428
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 125

Conread position: 6-552
Cow position: chr3:53516380-53516924 (view UCSC Genome Browser custom track)
Alignm length: 559
Alignm identity: 412
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 187

Conread position: 6-552
Cow position: chr3:57483958-57483403 (view UCSC Genome Browser custom track)
Alignm length: 560
Alignm identity: 421
Alignm E-value: 0
Alignm gaps (pig, cow): 265, 109

Conread position: 6-552
Cow position: chr3:59862141-59862692 (view UCSC Genome Browser custom track)
Alignm length: 561
Alignm identity: 425
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 471

Conread position: 6-552
Cow position: chr3:66620952-66621520 (view UCSC Genome Browser custom track)
Alignm length: 575
Alignm identity: 425
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 79

Conread position: 6-552
Cow position: chr3:72630844-72631386 (view UCSC Genome Browser custom track)
Alignm length: 557
Alignm identity: 422
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 188

Conread position: 6-552
Cow position: chr3:78026651-78026093 (view UCSC Genome Browser custom track)
Alignm length: 566
Alignm identity: 424
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 152

Conread position: 7-322
Cow position: chr3:21147959-21147649 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 223
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 152, 92

Conread position: 9-551
Cow position: chr3:5994317-5993761 (view UCSC Genome Browser custom track)
Alignm length: 563
Alignm identity: 416
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 182

Conread position: 9-552
Cow position: chr3:42447879-42448436 (view UCSC Genome Browser custom track)
Alignm length: 562
Alignm identity: 408
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 105

Conread position: 10-552
Cow position: chr3:18812281-18812818 (view UCSC Genome Browser custom track)
Alignm length: 553
Alignm identity: 412
Alignm E-value: 0
Alignm gaps (pig, cow): 186, 114

Conread position: 17-552
Cow position: chr3:49136781-49136245 (view UCSC Genome Browser custom track)
Alignm length: 551
Alignm identity: 417
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 166

Conread position: 29-552
Cow position: chr3:14237533-14237013 (view UCSC Genome Browser custom track)
Alignm length: 536
Alignm identity: 331
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 11, 143

Conread position: 39-458
Cow position: chr3:83274291-83274707 (view UCSC Genome Browser custom track)
Alignm length: 425
Alignm identity: 259
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 54, 111

Conread position: 39-552
Cow position: chr3:34506543-34506024 (view UCSC Genome Browser custom track)
Alignm length: 523
Alignm identity: 385
Alignm E-value: 0
Alignm gaps (pig, cow): 164, 140

Conread position: 39-552
Cow position: chr3:68872951-68872435 (view UCSC Genome Browser custom track)
Alignm length: 528
Alignm identity: 362
Alignm E-value: 0
Alignm gaps (pig, cow): 107, 292

Conread position: 39-552
Cow position: chr3:70887942-70888458 (view UCSC Genome Browser custom track)
Alignm length: 525
Alignm identity: 368
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 17

Conread position: 50-552
Cow position: chr3:60264201-60263698 (view UCSC Genome Browser custom track)
Alignm length: 516
Alignm identity: 334
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 149, 20

Conread position: 60-522
Cow position: chr3:46016871-46017334 (view UCSC Genome Browser custom track)
Alignm length: 473
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 19

Conread position: 79-552
Cow position: chr3:67164129-67164600 (view UCSC Genome Browser custom track)
Alignm length: 482
Alignm identity: 368
Alignm E-value: 0
Alignm gaps (pig, cow): 119, 157

Conread position: 88-552
Cow position: chr3:64822959-64823427 (view UCSC Genome Browser custom track)
Alignm length: 475
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 282, 91

Conread position: 110-534
Cow position: chr3:55892285-55892703 (view UCSC Genome Browser custom track)
Alignm length: 435
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 71

Conread position: 114-526
Cow position: chr3:77444346-77444731 (view UCSC Genome Browser custom track)
Alignm length: 419
Alignm identity: 291
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 248, 74

Conread position: 121-552
Cow position: chr3:15054795-15054377 (view UCSC Genome Browser custom track)
Alignm length: 444
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 99

Conread position: 136-552
Cow position: chr3:39880105-39879693 (view UCSC Genome Browser custom track)
Alignm length: 425
Alignm identity: 286
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 127, 75

Conread position: 138-502
Cow position: chr3:6662260-6662622 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 249
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 172, 35

Conread position: 159-545
Cow position: chr3:35963918-35964299 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 210, 33

Conread position: 162-552
Cow position: chr3:30331186-30330800 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 201, 30

Conread position: 163-552
Cow position: chr3:7478995-7478597 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 30

Conread position: 166-552
Cow position: chr3:56100758-56100361 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 164

Conread position: 196-552
Cow position: chr3:40339189-40338828 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 105

Conread position: 205-552
Cow position: chr3:595105-595456 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 93

Conread position: 213-552
Cow position: chr3:2854468-2854126 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 294

Conread position: 215-552
Cow position: chr3:36877680-36877332 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 19

Conread position: 236-552
Cow position: chr3:24588451-24588144 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 99

Conread position: 246-552
Cow position: chr3:56295194-56295506 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 200

Conread position: 267-552
Cow position: chr3:47087331-47087616 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 37

Conread position: 271-552
Cow position: chr3:63255175-63255462 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 201
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 99, 12

Conread position: 315-552
Cow position: chr3:38867394-38867637 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 186
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 55, 145

Conread position: 327-536
Cow position: chr3:42720604-42720395 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 168
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 59, 110

Conread position: 327-546
Cow position: chr3:33843726-33843506 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 153
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 32, 116

Conread position: 328-552
Cow position: chr3:31416109-31416340 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 179
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 332-552
Cow position: chr3:72671432-72671208 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 171
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 38, 104

Conread position: 368-549
Cow position: chr3:58948674-58948854 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 146
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 21, 38

Conread position: 375-552
Cow position: chr3:55486143-55486314 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 132
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 153, 9

Conread position: 404-552
Cow position: chr3:23206700-23206552 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 110
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 60, 40

Conread position: 418-551
Cow position: chr3:18462648-18462514 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 106
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 46, 112

Conread position: 418-552
Cow position: chr3:2509856-2509719 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 112
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 46, 0

Conread position: 1-188
Cow position: chr4:34183970-34183780 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 154
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 43, 57

Conread position: 1-223
Cow position: chr4:19005986-19005758 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 179
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 0

Conread position: 1-513
Cow position: chr4:27300911-27300403 (view UCSC Genome Browser custom track)
Alignm length: 528
Alignm identity: 381
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 176

Conread position: 1-551
Cow position: chr4:11110694-11110155 (view UCSC Genome Browser custom track)
Alignm length: 566
Alignm identity: 421
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 177

Conread position: 1-552
Cow position: chr4:28832130-28832670 (view UCSC Genome Browser custom track)
Alignm length: 572
Alignm identity: 430
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 72

Conread position: 1-552
Cow position: chr4:46665088-46665661 (view UCSC Genome Browser custom track)
Alignm length: 578
Alignm identity: 434
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 169

Conread position: 1-552
Cow position: chr4:60263595-60263034 (view UCSC Genome Browser custom track)
Alignm length: 566
Alignm identity: 434
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 134

Conread position: 3-523
Cow position: chr4:41333279-41333783 (view UCSC Genome Browser custom track)
Alignm length: 529
Alignm identity: 386
Alignm E-value: 0
Alignm gaps (pig, cow): 278, 40

Conread position: 3-536
Cow position: chr4:6206167-6206710 (view UCSC Genome Browser custom track)
Alignm length: 554
Alignm identity: 376
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 56

Conread position: 3-552
Cow position: chr4:159730-160282 (view UCSC Genome Browser custom track)
Alignm length: 562
Alignm identity: 415
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 448

Conread position: 3-552
Cow position: chr4:3126364-3126933 (view UCSC Genome Browser custom track)
Alignm length: 571
Alignm identity: 405
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 102

Conread position: 3-552
Cow position: chr4:4416643-4417184 (view UCSC Genome Browser custom track)
Alignm length: 561
Alignm identity: 398
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 174

Conread position: 3-552
Cow position: chr4:5444264-5443702 (view UCSC Genome Browser custom track)
Alignm length: 563
Alignm identity: 411
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 0

Conread position: 3-552
Cow position: chr4:5880734-5881286 (view UCSC Genome Browser custom track)
Alignm length: 561
Alignm identity: 411
Alignm E-value: 0
Alignm gaps (pig, cow): 199, 28

Conread position: 3-552
Cow position: chr4:32212741-32213292 (view UCSC Genome Browser custom track)
Alignm length: 563
Alignm identity: 398
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 267

Conread position: 3-552
Cow position: chr4:33596114-33596657 (view UCSC Genome Browser custom track)
Alignm length: 564
Alignm identity: 377
Alignm E-value: 0
Alignm gaps (pig, cow): 360, 61

Conread position: 3-552
Cow position: chr4:41955325-41955886 (view UCSC Genome Browser custom track)
Alignm length: 566
Alignm identity: 409
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 321

Conread position: 4-183
Cow position: chr4:100231-100049 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 140
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 34, 0

Conread position: 4-552
Cow position: chr4:17093293-17092739 (view UCSC Genome Browser custom track)
Alignm length: 560
Alignm identity: 405
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 188

Conread position: 5-552
Cow position: chr4:44780651-44780097 (view UCSC Genome Browser custom track)
Alignm length: 559
Alignm identity: 399
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 188

Conread position: 6-142
Cow position: chr4:29531305-29531170 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 111
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 32, 14

Conread position: 6-259
Cow position: chr4:48026978-48027239 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 172, 250

Conread position: 6-261
Cow position: chr4:31669851-31670118 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 0

Conread position: 6-512
Cow position: chr4:16360487-16361006 (view UCSC Genome Browser custom track)
Alignm length: 524
Alignm identity: 395
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 193

Conread position: 6-549
Cow position: chr4:6489788-6489232 (view UCSC Genome Browser custom track)
Alignm length: 561
Alignm identity: 421
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 190

Conread position: 6-551
Cow position: chr4:43881681-43882232 (view UCSC Genome Browser custom track)
Alignm length: 558
Alignm identity: 421
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 178

Conread position: 6-552
Cow position: chr4:356485-357032 (view UCSC Genome Browser custom track)
Alignm length: 560
Alignm identity: 415
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 101

Conread position: 6-552
Cow position: chr4:1049689-1049134 (view UCSC Genome Browser custom track)
Alignm length: 565
Alignm identity: 425
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 214

Conread position: 6-552
Cow position: chr4:10882122-10882677 (view UCSC Genome Browser custom track)
Alignm length: 562
Alignm identity: 423
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 185

Conread position: 6-552
Cow position: chr4:12240635-12240097 (view UCSC Genome Browser custom track)
Alignm length: 557
Alignm identity: 414
Alignm E-value: 0
Alignm gaps (pig, cow): 184, 59

Conread position: 6-552
Cow position: chr4:12587908-12588455 (view UCSC Genome Browser custom track)
Alignm length: 558
Alignm identity: 409
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 138

Conread position: 6-552
Cow position: chr4:13493894-13494453 (view UCSC Genome Browser custom track)
Alignm length: 567
Alignm identity: 428
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 446

Conread position: 6-552
Cow position: chr4:16639186-16639733 (view UCSC Genome Browser custom track)
Alignm length: 556
Alignm identity: 419
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 190

Conread position: 6-552
Cow position: chr4:17925386-17924838 (view UCSC Genome Browser custom track)
Alignm length: 556
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 265, 187

Conread position: 6-552
Cow position: chr4:25598921-25598362 (view UCSC Genome Browser custom track)
Alignm length: 566
Alignm identity: 414
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 137

Conread position: 6-552
Cow position: chr4:31564730-31564160 (view UCSC Genome Browser custom track)
Alignm length: 574
Alignm identity: 429
Alignm E-value: 0
Alignm gaps (pig, cow): 174, 103

Conread position: 6-552
Cow position: chr4:33072245-33071698 (view UCSC Genome Browser custom track)
Alignm length: 554
Alignm identity: 419
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 190

Conread position: 6-552
Cow position: chr4:36896948-36897503 (view UCSC Genome Browser custom track)
Alignm length: 560
Alignm identity: 428
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 186

Conread position: 6-552
Cow position: chr4:43319067-43318512 (view UCSC Genome Browser custom track)
Alignm length: 559
Alignm identity: 425
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 190

Conread position: 6-552
Cow position: chr4:44726172-44726705 (view UCSC Genome Browser custom track)
Alignm length: 557
Alignm identity: 402
Alignm E-value: 0
Alignm gaps (pig, cow): 190, 183

Conread position: 6-552
Cow position: chr4:57984557-57985115 (view UCSC Genome Browser custom track)
Alignm length: 560
Alignm identity: 424
Alignm E-value: 0
Alignm gaps (pig, cow): 176, 512

Conread position: 6-552
Cow position: chr4:67681767-67682320 (view UCSC Genome Browser custom track)
Alignm length: 560
Alignm identity: 411
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 206

Conread position: 9-475
Cow position: chr4:27294740-27294255 (view UCSC Genome Browser custom track)
Alignm length: 489
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 7

Conread position: 30-552
Cow position: chr4:44924924-44924409 (view UCSC Genome Browser custom track)
Alignm length: 534
Alignm identity: 376
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 138

Conread position: 39-527
Cow position: chr4:54969331-54969828 (view UCSC Genome Browser custom track)
Alignm length: 509
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 142, 53

Conread position: 39-552
Cow position: chr4:37813-37312 (view UCSC Genome Browser custom track)
Alignm length: 522
Alignm identity: 320
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 131, 66

Conread position: 42-442
Cow position: chr4:69505115-69505509 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 255
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 150, 88

Conread position: 53-480
Cow position: chr4:69521188-69521592 (view UCSC Genome Browser custom track)
Alignm length: 435
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 211, 66

Conread position: 77-547
Cow position: chr4:64984970-64985431 (view UCSC Genome Browser custom track)
Alignm length: 479
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 122, 49

Conread position: 87-549
Cow position: chr4:47462475-47462942 (view UCSC Genome Browser custom track)
Alignm length: 472
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 190, 92

Conread position: 94-552
Cow position: chr4:9847559-9847085 (view UCSC Genome Browser custom track)
Alignm length: 480
Alignm identity: 364
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 179

Conread position: 126-552
Cow position: chr4:34178541-34178112 (view UCSC Genome Browser custom track)
Alignm length: 440
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 130, 67

Conread position: 131-552
Cow position: chr4:26877079-26876654 (view UCSC Genome Browser custom track)
Alignm length: 430
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 140, 62

Conread position: 181-516
Cow position: chr4:14755903-14755574 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 244
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 188, 20

Conread position: 193-549
Cow position: chr4:68110271-68109907 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 314

Conread position: 216-552
Cow position: chr4:19005526-19005190 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 27

Conread position: 216-552
Cow position: chr4:42405390-42405735 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 116

Conread position: 252-547
Cow position: chr4:34183803-34183523 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 225
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 11, 50

Conread position: 289-552
Cow position: chr4:41191744-41191475 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 246

Conread position: 368-552
Cow position: chr4:14138983-14139163 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 141
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 96, 16

Conread position: 375-552
Cow position: chr4:33494495-33494678 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 138
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 66, 137

Conread position: 1-221
Cow position: chr5:29766550-29766784 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 182
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 35, 114

Conread position: 1-257
Cow position: chr5:39246146-39245889 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 190

Conread position: 1-272
Cow position: chr5:27056014-27055738 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 269

Conread position: 1-459
Cow position: chr5:28012320-28012803 (view UCSC Genome Browser custom track)
Alignm length: 485
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 171

Conread position: 1-542
Cow position: chr5:307662-307110 (view UCSC Genome Browser custom track)
Alignm length: 554
Alignm identity: 395
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 549

Conread position: 1-543
Cow position: chr5:46629520-46628971 (view UCSC Genome Browser custom track)
Alignm length: 562
Alignm identity: 411
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 428

Conread position: 1-544
Cow position: chr5:41554669-41554117 (view UCSC Genome Browser custom track)
Alignm length: 560
Alignm identity: 412
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 156

Conread position: 1-552
Cow position: chr5:41528108-41527567 (view UCSC Genome Browser custom track)
Alignm length: 566
Alignm identity: 443
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 149

Conread position: 1-552
Cow position: chr5:41961059-41960520 (view UCSC Genome Browser custom track)
Alignm length: 560
Alignm identity: 443
Alignm E-value: 0
Alignm gaps (pig, cow): 189, 68

Conread position: 1-552
Cow position: chr5:45700980-45701540 (view UCSC Genome Browser custom track)
Alignm length: 565
Alignm identity: 451
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 58

Conread position: 1-552
Cow position: chr5:46668616-46669160 (view UCSC Genome Browser custom track)
Alignm length: 562
Alignm identity: 422
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 20

Conread position: 1-552
Cow position: chr5:54791966-54791406 (view UCSC Genome Browser custom track)
Alignm length: 565
Alignm identity: 413
Alignm E-value: 0
Alignm gaps (pig, cow): 164, 139

Conread position: 3-230
Cow position: chr5:32308726-32308497 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 171
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 41, 180

Conread position: 3-236
Cow position: chr5:59639448-59639677 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 176
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 63, 73

Conread position: 3-288
Cow position: chr5:54861393-54861121 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 138

Conread position: 3-306
Cow position: chr5:48532696-48532992 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 217
Alignm E-value: 8.99999e-40
Alignm gaps (pig, cow): 19, 152

Conread position: 3-308
Cow position: chr5:52434219-52434520 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 86

Conread position: 3-322
Cow position: chr5:27002678-27002992 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 40

Conread position: 3-323
Cow position: chr5:28241720-28242040 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 190

Conread position: 3-360
Cow position: chr5:9419403-9419045 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 133

Conread position: 3-391
Cow position: chr5:13046119-13046520 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 176, 40

Conread position: 3-480
Cow position: chr5:49757996-49757523 (view UCSC Genome Browser custom track)
Alignm length: 484
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 99

Conread position: 3-491
Cow position: chr5:58152099-58151621 (view UCSC Genome Browser custom track)
Alignm length: 497
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 175, 33

Conread position: 3-531
Cow position: chr5:53625242-53624718 (view UCSC Genome Browser custom track)
Alignm length: 537
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 26

Conread position: 3-552
Cow position: chr5:3965118-3965669 (view UCSC Genome Browser custom track)
Alignm length: 562
Alignm identity: 410
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 13

Conread position: 3-552
Cow position: chr5:4018533-4017972 (view UCSC Genome Browser custom track)
Alignm length: 564
Alignm identity: 387
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 183

Conread position: 3-552
Cow position: chr5:10842711-10842155 (view UCSC Genome Browser custom track)
Alignm length: 566
Alignm identity: 403
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 191

Conread position: 3-552
Cow position: chr5:14784699-14784143 (view UCSC Genome Browser custom track)
Alignm length: 577
Alignm identity: 409
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 78

Conread position: 3-552
Cow position: chr5:18664459-18665001 (view UCSC Genome Browser custom track)
Alignm length: 564
Alignm identity: 398
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 195

Conread position: 3-552
Cow position: chr5:23959648-23959103 (view UCSC Genome Browser custom track)
Alignm length: 560
Alignm identity: 392
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 114

Conread position: 3-552
Cow position: chr5:32773442-32773991 (view UCSC Genome Browser custom track)
Alignm length: 561
Alignm identity: 395
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 189

Conread position: 3-552
Cow position: chr5:47830404-47829851 (view UCSC Genome Browser custom track)
Alignm length: 560
Alignm identity: 405
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 188

Conread position: 4-483
Cow position: chr5:41465742-41466231 (view UCSC Genome Browser custom track)
Alignm length: 496
Alignm identity: 351
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 189

Conread position: 5-552
Cow position: chr5:6154230-6153673 (view UCSC Genome Browser custom track)
Alignm length: 563
Alignm identity: 422
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 73

Conread position: 6-489
Cow position: chr5:52613276-52612795 (view UCSC Genome Browser custom track)
Alignm length: 497
Alignm identity: 327
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 38, 96

Conread position: 6-535
Cow position: chr5:10919497-10920028 (view UCSC Genome Browser custom track)
Alignm length: 541
Alignm identity: 378
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 165

Conread position: 6-551
Cow position: chr5:47893868-47893319 (view UCSC Genome Browser custom track)
Alignm length: 559
Alignm identity: 385
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 158

Conread position: 6-552
Cow position: chr5:1341361-1340804 (view UCSC Genome Browser custom track)
Alignm length: 562
Alignm identity: 420
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 115

Conread position: 6-552
Cow position: chr5:2915120-2915668 (view UCSC Genome Browser custom track)
Alignm length: 556
Alignm identity: 416
Alignm E-value: 0
Alignm gaps (pig, cow): 179, 427

Conread position: 6-552
Cow position: chr5:3503447-3502882 (view UCSC Genome Browser custom track)
Alignm length: 569
Alignm identity: 421
Alignm E-value: 0
Alignm gaps (pig, cow): 177, 317

Conread position: 6-552
Cow position: chr5:3786590-3787154 (view UCSC Genome Browser custom track)
Alignm length: 568
Alignm identity: 426
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 320

Conread position: 6-552
Cow position: chr5:4069891-4070447 (view UCSC Genome Browser custom track)
Alignm length: 568
Alignm identity: 412
Alignm E-value: 0
Alignm gaps (pig, cow): 265, 40

Conread position: 6-552
Cow position: chr5:4385913-4386463 (view UCSC Genome Browser custom track)
Alignm length: 560
Alignm identity: 409
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 126

Conread position: 6-552
Cow position: chr5:12643055-12642523 (view UCSC Genome Browser custom track)
Alignm length: 557
Alignm identity: 412
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 121

Conread position: 6-552
Cow position: chr5:30580000-30580570 (view UCSC Genome Browser custom track)
Alignm length: 573
Alignm identity: 417
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 355

Conread position: 6-552
Cow position: chr5:34697274-34697827 (view UCSC Genome Browser custom track)
Alignm length: 559
Alignm identity: 424
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 291

Conread position: 6-552
Cow position: chr5:37733018-37733575 (view UCSC Genome Browser custom track)
Alignm length: 563
Alignm identity: 410
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 112

Conread position: 6-552
Cow position: chr5:46737903-46737363 (view UCSC Genome Browser custom track)
Alignm length: 559
Alignm identity: 413
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 107

Conread position: 6-552
Cow position: chr5:48808068-48807507 (view UCSC Genome Browser custom track)
Alignm length: 566
Alignm identity: 431
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 185

Conread position: 6-552
Cow position: chr5:49519231-49519782 (view UCSC Genome Browser custom track)
Alignm length: 559
Alignm identity: 420
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 190

Conread position: 6-552
Cow position: chr5:55628662-55629220 (view UCSC Genome Browser custom track)
Alignm length: 561
Alignm identity: 432
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 190

Conread position: 6-552
Cow position: chr5:57481868-57481314 (view UCSC Genome Browser custom track)
Alignm length: 558
Alignm identity: 424
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 190

Conread position: 6-552
Cow position: chr5:59282990-59283542 (view UCSC Genome Browser custom track)
Alignm length: 560
Alignm identity: 419
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 79

Conread position: 6-552
Cow position: chr5:64781345-64780789 (view UCSC Genome Browser custom track)
Alignm length: 559
Alignm identity: 425
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 190

Conread position: 6-552
Cow position: chr5:73488886-73488334 (view UCSC Genome Browser custom track)
Alignm length: 561
Alignm identity: 429
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 87

Conread position: 9-552
Cow position: chr5:24099343-24099887 (view UCSC Genome Browser custom track)
Alignm length: 555
Alignm identity: 423
Alignm E-value: 0
Alignm gaps (pig, cow): 268, 184

Conread position: 10-552
Cow position: chr5:46005178-46004631 (view UCSC Genome Browser custom track)
Alignm length: 558
Alignm identity: 405
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 54

Conread position: 21-552
Cow position: chr5:31100738-31100202 (view UCSC Genome Browser custom track)
Alignm length: 541
Alignm identity: 421
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 135

Conread position: 39-552
Cow position: chr5:10856109-10855591 (view UCSC Genome Browser custom track)
Alignm length: 522
Alignm identity: 382
Alignm E-value: 0
Alignm gaps (pig, cow): 330, 154

Conread position: 39-552
Cow position: chr5:14344711-14344212 (view UCSC Genome Browser custom track)
Alignm length: 521
Alignm identity: 371
Alignm E-value: 0
Alignm gaps (pig, cow): 231, 94

Conread position: 39-552
Cow position: chr5:18885819-18885310 (view UCSC Genome Browser custom track)
Alignm length: 523
Alignm identity: 370
Alignm E-value: 0
Alignm gaps (pig, cow): 160, 65

Conread position: 39-552
Cow position: chr5:46645667-46646180 (view UCSC Genome Browser custom track)
Alignm length: 542
Alignm identity: 380
Alignm E-value: 0
Alignm gaps (pig, cow): 147, 15

Conread position: 82-391
Cow position: chr5:24999236-24998926 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 189, 106

Conread position: 87-552
Cow position: chr5:51309100-51308626 (view UCSC Genome Browser custom track)
Alignm length: 485
Alignm identity: 361
Alignm E-value: 0
Alignm gaps (pig, cow): 189, 77

Conread position: 103-371
Cow position: chr5:27654586-27654850 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 85

Conread position: 104-552
Cow position: chr5:12731939-12731488 (view UCSC Genome Browser custom track)
Alignm length: 459
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 85

Conread position: 107-552
Cow position: chr5:7274625-7275066 (view UCSC Genome Browser custom track)
Alignm length: 456
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 87

Conread position: 111-552
Cow position: chr5:24151564-24152000 (view UCSC Genome Browser custom track)
Alignm length: 450
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 163, 48

Conread position: 114-552
Cow position: chr5:23687109-23686673 (view UCSC Genome Browser custom track)
Alignm length: 447
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 156, 28

Conread position: 150-544
Cow position: chr5:26183661-26184057 (view UCSC Genome Browser custom track)
Alignm length: 406
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 22

Conread position: 155-512
Cow position: chr5:48855038-48855397 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 255
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 116, 136

Conread position: 169-322
Cow position: chr5:32282130-32281975 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 127
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 26, 0

Conread position: 177-552
Cow position: chr5:46777249-46777619 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 68

Conread position: 180-512
Cow position: chr5:27197168-27197498 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 19

Conread position: 203-552
Cow position: chr5:29766999-29767349 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 98

Conread position: 205-531
Cow position: chr5:29434840-29434515 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 238
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 51, 10

Conread position: 210-551
Cow position: chr5:18560526-18560181 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 84

Conread position: 243-552
Cow position: chr5:7143137-7142838 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 204
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 79, 19

Conread position: 258-545
Cow position: chr5:41376976-41376690 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 206
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 18, 40

Conread position: 259-552
Cow position: chr5:40923713-40923420 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 184

Conread position: 270-537
Cow position: chr5:54860984-54860710 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 205
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 49, 260

Conread position: 278-462
Cow position: chr5:44488-44299 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 138
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 91, 0

Conread position: 301-552
Cow position: chr5:10813782-10813524 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 192
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 68, 0

Conread position: 308-552
Cow position: chr5:27003211-27003463 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 191
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 61, 128

Conread position: 315-552
Cow position: chr5:32281783-32281542 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 195
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 129

Conread position: 343-552
Cow position: chr5:61081203-61080990 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 172
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 173

Conread position: 362-552
Cow position: chr5:11115716-11115527 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 136
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 101, 148

Conread position: 367-552
Cow position: chr5:55653805-55653619 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 141
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 96, 143

Conread position: 368-552
Cow position: chr5:52434779-52434967 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 156
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 21, 0

Conread position: 387-552
Cow position: chr5:53945903-53946065 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 129
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 76, 45

Conread position: 1-263
Cow position: chr6:6475061-6474792 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 0

Conread position: 1-367
Cow position: chr6:38271695-38272056 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 195

Conread position: 1-551
Cow position: chr6:10644548-10645087 (view UCSC Genome Browser custom track)
Alignm length: 557
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 89

Conread position: 1-552
Cow position: chr6:13316667-13316102 (view UCSC Genome Browser custom track)
Alignm length: 580
Alignm identity: 437
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 291

Conread position: 1-552
Cow position: chr6:18973602-18973049 (view UCSC Genome Browser custom track)
Alignm length: 568
Alignm identity: 426
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 193

Conread position: 1-552
Cow position: chr6:28105054-28104497 (view UCSC Genome Browser custom track)
Alignm length: 567
Alignm identity: 421
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 11

Conread position: 2-552
Cow position: chr6:28133737-28134273 (view UCSC Genome Browser custom track)
Alignm length: 561
Alignm identity: 422
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 236

Conread position: 2-552
Cow position: chr6:58601287-58601845 (view UCSC Genome Browser custom track)
Alignm length: 565
Alignm identity: 454
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 324

Conread position: 2-552
Cow position: chr6:66193713-66193162 (view UCSC Genome Browser custom track)
Alignm length: 567
Alignm identity: 367
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 197

Conread position: 3-200
Cow position: chr6:6157353-6157548 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 146
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 91, 0

Conread position: 3-256
Cow position: chr6:59918267-59918006 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 215

Conread position: 3-345
Cow position: chr6:65928773-65929116 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 5

Conread position: 3-371
Cow position: chr6:68027730-68028094 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 196

Conread position: 3-423
Cow position: chr6:43999870-44000297 (view UCSC Genome Browser custom track)
Alignm length: 430
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 87

Conread position: 3-435
Cow position: chr6:4258938-4258516 (view UCSC Genome Browser custom track)
Alignm length: 436
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 151

Conread position: 3-508
Cow position: chr6:13310552-13310035 (view UCSC Genome Browser custom track)
Alignm length: 519
Alignm identity: 382
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 351

Conread position: 3-550
Cow position: chr6:15477971-15478542 (view UCSC Genome Browser custom track)
Alignm length: 581
Alignm identity: 415
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 5

Conread position: 3-552
Cow position: chr6:7178486-7177924 (view UCSC Genome Browser custom track)
Alignm length: 569
Alignm identity: 417
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 18

Conread position: 3-552
Cow position: chr6:12665511-12664956 (view UCSC Genome Browser custom track)
Alignm length: 562
Alignm identity: 397
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 188

Conread position: 3-552
Cow position: chr6:28490760-28490202 (view UCSC Genome Browser custom track)
Alignm length: 567
Alignm identity: 403
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 102

Conread position: 3-552
Cow position: chr6:40275896-40276447 (view UCSC Genome Browser custom track)
Alignm length: 558
Alignm identity: 403
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 114

Conread position: 3-552
Cow position: chr6:43618524-43619087 (view UCSC Genome Browser custom track)
Alignm length: 567
Alignm identity: 410
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 307

Conread position: 3-552
Cow position: chr6:44149748-44149184 (view UCSC Genome Browser custom track)
Alignm length: 567
Alignm identity: 410
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 179

Conread position: 3-552
Cow position: chr6:58065538-58066095 (view UCSC Genome Browser custom track)
Alignm length: 570
Alignm identity: 430
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 203

Conread position: 3-552
Cow position: chr6:66232622-66233170 (view UCSC Genome Browser custom track)
Alignm length: 567
Alignm identity: 406
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 205

Conread position: 5-338
Cow position: chr6:11724299-11723973 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 211
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 30, 67

Conread position: 5-552
Cow position: chr6:34891314-34890759 (view UCSC Genome Browser custom track)
Alignm length: 561
Alignm identity: 426
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 191

Conread position: 6-319
Cow position: chr6:65882023-65882338 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 56

Conread position: 6-451
Cow position: chr6:8021697-8022150 (view UCSC Genome Browser custom track)
Alignm length: 464
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 172, 15

Conread position: 6-527
Cow position: chr6:27529193-27528659 (view UCSC Genome Browser custom track)
Alignm length: 539
Alignm identity: 401
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 264

Conread position: 6-552
Cow position: chr6:703028-703577 (view UCSC Genome Browser custom track)
Alignm length: 560
Alignm identity: 421
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 121

Conread position: 6-552
Cow position: chr6:914442-914999 (view UCSC Genome Browser custom track)
Alignm length: 564
Alignm identity: 426
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 96

Conread position: 6-552
Cow position: chr6:3276563-3276004 (view UCSC Genome Browser custom track)
Alignm length: 562
Alignm identity: 419
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 402

Conread position: 6-552
Cow position: chr6:3487612-3487061 (view UCSC Genome Browser custom track)
Alignm length: 566
Alignm identity: 421
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 167

Conread position: 6-552
Cow position: chr6:5948966-5948416 (view UCSC Genome Browser custom track)
Alignm length: 559
Alignm identity: 431
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 190

Conread position: 6-552
Cow position: chr6:15140370-15139810 (view UCSC Genome Browser custom track)
Alignm length: 565
Alignm identity: 424
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 194

Conread position: 6-552
Cow position: chr6:15279000-15278452 (view UCSC Genome Browser custom track)
Alignm length: 557
Alignm identity: 420
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 190

Conread position: 6-552
Cow position: chr6:20560295-20559737 (view UCSC Genome Browser custom track)
Alignm length: 565
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 154

Conread position: 6-552
Cow position: chr6:27471413-27471939 (view UCSC Genome Browser custom track)
Alignm length: 554
Alignm identity: 394
Alignm E-value: 0
Alignm gaps (pig, cow): 190, 110

Conread position: 6-552
Cow position: chr6:30274080-30273530 (view UCSC Genome Browser custom track)
Alignm length: 560
Alignm identity: 419
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 21

Conread position: 6-552
Cow position: chr6:35875905-35875341 (view UCSC Genome Browser custom track)
Alignm length: 566
Alignm identity: 433
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 518

Conread position: 6-552
Cow position: chr6:39334058-39333510 (view UCSC Genome Browser custom track)
Alignm length: 558
Alignm identity: 423
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 190

Conread position: 6-552
Cow position: chr6:40553762-40553218 (view UCSC Genome Browser custom track)
Alignm length: 556
Alignm identity: 422
Alignm E-value: 0
Alignm gaps (pig, cow): 144, 156

Conread position: 6-552
Cow position: chr6:40866506-40865957 (view UCSC Genome Browser custom track)
Alignm length: 559
Alignm identity: 426
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 94

Conread position: 6-552
Cow position: chr6:41190133-41190662 (view UCSC Genome Browser custom track)
Alignm length: 552
Alignm identity: 397
Alignm E-value: 0
Alignm gaps (pig, cow): 265, 187

Conread position: 6-552
Cow position: chr6:51086754-51087306 (view UCSC Genome Browser custom track)
Alignm length: 559
Alignm identity: 417
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 190

Conread position: 6-552
Cow position: chr6:51715351-51715896 (view UCSC Genome Browser custom track)
Alignm length: 567
Alignm identity: 421
Alignm E-value: 0
Alignm gaps (pig, cow): 184, 221

Conread position: 6-552
Cow position: chr6:52693828-52694390 (view UCSC Genome Browser custom track)
Alignm length: 567
Alignm identity: 400
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 15

Conread position: 6-552
Cow position: chr6:65842436-65842979 (view UCSC Genome Browser custom track)
Alignm length: 561
Alignm identity: 414
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 163

Conread position: 7-451
Cow position: chr6:34443724-34444185 (view UCSC Genome Browser custom track)
Alignm length: 469
Alignm identity: 300
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 29, 97

Conread position: 9-538
Cow position: chr6:69143445-69143972 (view UCSC Genome Browser custom track)
Alignm length: 543
Alignm identity: 343
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 186, 22

Conread position: 9-552
Cow position: chr6:51730912-51731448 (view UCSC Genome Browser custom track)
Alignm length: 558
Alignm identity: 411
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 22

Conread position: 10-342
Cow position: chr6:39438580-39438915 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 186

Conread position: 10-464
Cow position: chr6:50634761-50635232 (view UCSC Genome Browser custom track)
Alignm length: 477
Alignm identity: 367
Alignm E-value: 0
Alignm gaps (pig, cow): 169, 28

Conread position: 10-552
Cow position: chr6:21973472-21974034 (view UCSC Genome Browser custom track)
Alignm length: 568
Alignm identity: 420
Alignm E-value: 0
Alignm gaps (pig, cow): 174, 436

Conread position: 10-552
Cow position: chr6:25215037-25215581 (view UCSC Genome Browser custom track)
Alignm length: 562
Alignm identity: 416
Alignm E-value: 0
Alignm gaps (pig, cow): 359, 171

Conread position: 10-552
Cow position: chr6:58027491-58028036 (view UCSC Genome Browser custom track)
Alignm length: 556
Alignm identity: 411
Alignm E-value: 0
Alignm gaps (pig, cow): 261, 506

Conread position: 11-298
Cow position: chr6:1099341-1099058 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 119

Conread position: 12-552
Cow position: chr6:28169721-28170268 (view UCSC Genome Browser custom track)
Alignm length: 553
Alignm identity: 412
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 184

Conread position: 13-552
Cow position: chr6:3888677-3888149 (view UCSC Genome Browser custom track)
Alignm length: 553
Alignm identity: 411
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 69

Conread position: 30-516
Cow position: chr6:15920690-15921182 (view UCSC Genome Browser custom track)
Alignm length: 505
Alignm identity: 323
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 123, 75

Conread position: 39-489
Cow position: chr6:36527148-36527608 (view UCSC Genome Browser custom track)
Alignm length: 462
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 232, 8

Conread position: 39-541
Cow position: chr6:184936-184423 (view UCSC Genome Browser custom track)
Alignm length: 518
Alignm identity: 372
Alignm E-value: 0
Alignm gaps (pig, cow): 142, 99

Conread position: 39-552
Cow position: chr6:17046899-17047425 (view UCSC Genome Browser custom track)
Alignm length: 530
Alignm identity: 395
Alignm E-value: 0
Alignm gaps (pig, cow): 232, 349

Conread position: 39-552
Cow position: chr6:21836346-21835820 (view UCSC Genome Browser custom track)
Alignm length: 538
Alignm identity: 383
Alignm E-value: 0
Alignm gaps (pig, cow): 149, 132

Conread position: 39-552
Cow position: chr6:44262644-44262110 (view UCSC Genome Browser custom track)
Alignm length: 542
Alignm identity: 399
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 232

Conread position: 40-552
Cow position: chr6:11274065-11273544 (view UCSC Genome Browser custom track)
Alignm length: 533
Alignm identity: 381
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 261

Conread position: 49-552
Cow position: chr6:55542408-55541892 (view UCSC Genome Browser custom track)
Alignm length: 521
Alignm identity: 396
Alignm E-value: 0
Alignm gaps (pig, cow): 147, 141

Conread position: 82-516
Cow position: chr6:28275898-28276334 (view UCSC Genome Browser custom track)
Alignm length: 443
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 197, 111

Conread position: 83-552
Cow position: chr6:50717-50240 (view UCSC Genome Browser custom track)
Alignm length: 481
Alignm identity: 356
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 106

Conread position: 111-552
Cow position: chr6:10250680-10250241 (view UCSC Genome Browser custom track)
Alignm length: 454
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 153

Conread position: 129-527
Cow position: chr6:10609823-10610209 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 140, 59

Conread position: 159-552
Cow position: chr6:3784734-3785134 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 122, 33

Conread position: 159-552
Cow position: chr6:28187850-28187456 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 117, 33

Conread position: 163-536
Cow position: chr6:41349-40973 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 138

Conread position: 166-552
Cow position: chr6:7140358-7139977 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 204, 97

Conread position: 168-552
Cow position: chr6:64717006-64717389 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 21

Conread position: 184-538
Cow position: chr6:10339629-10339276 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 14

Conread position: 202-552
Cow position: chr6:40379623-40379267 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 167, 35

Conread position: 265-552
Cow position: chr6:46603174-46602879 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 0

Conread position: 280-496
Cow position: chr6:32301158-32300937 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 165
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 89, 46

Conread position: 321-552
Cow position: chr6:66745125-66745357 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 165
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 36, 113

Conread position: 321-552
Cow position: chr6:67265016-67265248 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 165
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 36, 113

Conread position: 368-552
Cow position: chr6:28766862-28766676 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 136
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 95, 0

Conread position: 428-552
Cow position: chr6:47625301-47625426 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 101
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 91, 16

Conread position: 1-297
Cow position: chr7:63555855-63556140 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 207
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 40, 61

Conread position: 1-319
Cow position: chr7:27787532-27787848 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 270, 33

Conread position: 1-365
Cow position: chr7:20785078-20784714 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 180, 104

Conread position: 1-391
Cow position: chr7:54671184-54670757 (view UCSC Genome Browser custom track)
Alignm length: 429
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 74

Conread position: 1-550
Cow position: chr7:19989924-19990470 (view UCSC Genome Browser custom track)
Alignm length: 561
Alignm identity: 426
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 176

Conread position: 1-551
Cow position: chr7:29471356-29471927 (view UCSC Genome Browser custom track)
Alignm length: 583
Alignm identity: 432
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 102

Conread position: 1-551
Cow position: chr7:42871038-42871599 (view UCSC Genome Browser custom track)
Alignm length: 565
Alignm identity: 441
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 443

Conread position: 1-551
Cow position: chr7:51015162-51015712 (view UCSC Genome Browser custom track)
Alignm length: 563
Alignm identity: 431
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 174

Conread position: 1-552
Cow position: chr7:1609748-1609182 (view UCSC Genome Browser custom track)
Alignm length: 574
Alignm identity: 430
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 326

Conread position: 1-552
Cow position: chr7:3156365-3156926 (view UCSC Genome Browser custom track)
Alignm length: 567
Alignm identity: 439
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 193

Conread position: 1-552
Cow position: chr7:20798545-20797992 (view UCSC Genome Browser custom track)
Alignm length: 563
Alignm identity: 404
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 191

Conread position: 1-552
Cow position: chr7:33332457-33333015 (view UCSC Genome Browser custom track)
Alignm length: 566
Alignm identity: 453
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 183

Conread position: 1-552
Cow position: chr7:48635325-48635875 (view UCSC Genome Browser custom track)
Alignm length: 564
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 190, 389

Conread position: 1-552
Cow position: chr7:59679745-59680303 (view UCSC Genome Browser custom track)
Alignm length: 562
Alignm identity: 421
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 506

Conread position: 1-552
Cow position: chr7:67429468-67430023 (view UCSC Genome Browser custom track)
Alignm length: 566
Alignm identity: 419
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 246

Conread position: 1-552
Cow position: chr7:67675995-67676534 (view UCSC Genome Browser custom track)
Alignm length: 559
Alignm identity: 405
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 6

Conread position: 2-284
Cow position: chr7:995414-995701 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 143

Conread position: 3-527
Cow position: chr7:59138557-59139062 (view UCSC Genome Browser custom track)
Alignm length: 534
Alignm identity: 368
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 16

Conread position: 3-539
Cow position: chr7:25251050-25251583 (view UCSC Genome Browser custom track)
Alignm length: 554
Alignm identity: 375
Alignm E-value: 0
Alignm gaps (pig, cow): 216, 5

Conread position: 3-542
Cow position: chr7:27583819-27583282 (view UCSC Genome Browser custom track)
Alignm length: 551
Alignm identity: 368
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 143

Conread position: 3-545
Cow position: chr7:24058340-24058886 (view UCSC Genome Browser custom track)
Alignm length: 561
Alignm identity: 392
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 251

Conread position: 3-552
Cow position: chr7:545742-546301 (view UCSC Genome Browser custom track)
Alignm length: 562
Alignm identity: 410
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 278

Conread position: 3-552
Cow position: chr7:14214468-14213913 (view UCSC Genome Browser custom track)
Alignm length: 565
Alignm identity: 427
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 189

Conread position: 3-552
Cow position: chr7:20514877-20514332 (view UCSC Genome Browser custom track)
Alignm length: 560
Alignm identity: 390
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 192

Conread position: 3-552
Cow position: chr7:20774433-20773879 (view UCSC Genome Browser custom track)
Alignm length: 561
Alignm identity: 404
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 188

Conread position: 3-552
Cow position: chr7:25440402-25440958 (view UCSC Genome Browser custom track)
Alignm length: 561
Alignm identity: 405
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 207

Conread position: 3-552
Cow position: chr7:33312051-33311489 (view UCSC Genome Browser custom track)
Alignm length: 565
Alignm identity: 398
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 192

Conread position: 3-552
Cow position: chr7:63386626-63387202 (view UCSC Genome Browser custom track)
Alignm length: 578
Alignm identity: 425
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 154

Conread position: 3-552
Cow position: chr7:67489610-67490147 (view UCSC Genome Browser custom track)
Alignm length: 565
Alignm identity: 366
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 16, 23

Conread position: 3-552
Cow position: chr7:68333845-68334375 (view UCSC Genome Browser custom track)
Alignm length: 556
Alignm identity: 381
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 178

Conread position: 5-552
Cow position: chr7:57564196-57563646 (view UCSC Genome Browser custom track)
Alignm length: 553
Alignm identity: 374
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 442

Conread position: 6-256
Cow position: chr7:33405338-33405089 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 191
Alignm E-value: 0
Alignm gaps (pig, cow): 190, 183

Conread position: 6-322
Cow position: chr7:8144331-8144013 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 187

Conread position: 6-341
Cow position: chr7:34150209-34150543 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 190, 305

Conread position: 6-368
Cow position: chr7:39792672-39793036 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 190

Conread position: 6-552
Cow position: chr7:1371744-1371191 (view UCSC Genome Browser custom track)
Alignm length: 563
Alignm identity: 422
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 500

Conread position: 6-552
Cow position: chr7:1452545-1453100 (view UCSC Genome Browser custom track)
Alignm length: 563
Alignm identity: 424
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 190

Conread position: 6-552
Cow position: chr7:10430521-10429973 (view UCSC Genome Browser custom track)
Alignm length: 557
Alignm identity: 422
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 190

Conread position: 6-552
Cow position: chr7:13532998-13532459 (view UCSC Genome Browser custom track)
Alignm length: 555
Alignm identity: 422
Alignm E-value: 0
Alignm gaps (pig, cow): 192, 183

Conread position: 6-552
Cow position: chr7:14138694-14138140 (view UCSC Genome Browser custom track)
Alignm length: 559
Alignm identity: 428
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 186

Conread position: 6-552
Cow position: chr7:21126760-21126213 (view UCSC Genome Browser custom track)
Alignm length: 558
Alignm identity: 417
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 190

Conread position: 6-552
Cow position: chr7:21234108-21233550 (view UCSC Genome Browser custom track)
Alignm length: 561
Alignm identity: 427
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 135

Conread position: 6-552
Cow position: chr7:21986331-21986858 (view UCSC Genome Browser custom track)
Alignm length: 555
Alignm identity: 417
Alignm E-value: 0
Alignm gaps (pig, cow): 265, 187

Conread position: 6-552
Cow position: chr7:24807553-24807028 (view UCSC Genome Browser custom track)
Alignm length: 557
Alignm identity: 407
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 15

Conread position: 6-552
Cow position: chr7:34486818-34487367 (view UCSC Genome Browser custom track)
Alignm length: 559
Alignm identity: 420
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 190

Conread position: 6-552
Cow position: chr7:38397717-38398273 (view UCSC Genome Browser custom track)
Alignm length: 561
Alignm identity: 421
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 178

Conread position: 6-552
Cow position: chr7:45948239-45947694 (view UCSC Genome Browser custom track)
Alignm length: 560
Alignm identity: 410
Alignm E-value: 0
Alignm gaps (pig, cow): 162, 219

Conread position: 6-552
Cow position: chr7:55537019-55536473 (view UCSC Genome Browser custom track)
Alignm length: 559
Alignm identity: 420
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 14

Conread position: 6-552
Cow position: chr7:67799728-67800281 (view UCSC Genome Browser custom track)
Alignm length: 559
Alignm identity: 425
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 149

Conread position: 9-517
Cow position: chr7:58994498-58995004 (view UCSC Genome Browser custom track)
Alignm length: 522
Alignm identity: 384
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 148

Conread position: 9-541
Cow position: chr7:27606423-27605875 (view UCSC Genome Browser custom track)
Alignm length: 560
Alignm identity: 402
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 76

Conread position: 9-543
Cow position: chr7:46901169-46900622 (view UCSC Genome Browser custom track)
Alignm length: 555
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 261, 66

Conread position: 9-552
Cow position: chr7:5309208-5308658 (view UCSC Genome Browser custom track)
Alignm length: 556
Alignm identity: 430
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 183

Conread position: 9-552
Cow position: chr7:64240098-64239538 (view UCSC Genome Browser custom track)
Alignm length: 565
Alignm identity: 417
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 175

Conread position: 9-552
Cow position: chr7:66905628-66906181 (view UCSC Genome Browser custom track)
Alignm length: 555
Alignm identity: 424
Alignm E-value: 0
Alignm gaps (pig, cow): 187, 477

Conread position: 20-334
Cow position: chr7:39097586-39097279 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 251, 15

Conread position: 25-552
Cow position: chr7:5663470-5664022 (view UCSC Genome Browser custom track)
Alignm length: 557
Alignm identity: 403
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 214

Conread position: 30-552
Cow position: chr7:41875352-41874822 (view UCSC Genome Browser custom track)
Alignm length: 546
Alignm identity: 369
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 184

Conread position: 36-330
Cow position: chr7:68481481-68481774 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 147, 29

Conread position: 39-552
Cow position: chr7:20532903-20533403 (view UCSC Genome Browser custom track)
Alignm length: 519
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 42

Conread position: 43-293
Cow position: chr7:49829684-49829428 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 0

Conread position: 47-306
Cow position: chr7:19975716-19975464 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 173
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 30, 26

Conread position: 47-552
Cow position: chr7:24878927-24878428 (view UCSC Genome Browser custom track)
Alignm length: 514
Alignm identity: 397
Alignm E-value: 0
Alignm gaps (pig, cow): 226, 50

Conread position: 55-552
Cow position: chr7:6630347-6629845 (view UCSC Genome Browser custom track)
Alignm length: 506
Alignm identity: 363
Alignm E-value: 0
Alignm gaps (pig, cow): 221, 137

Conread position: 65-552
Cow position: chr7:5261961-5261462 (view UCSC Genome Browser custom track)
Alignm length: 503
Alignm identity: 364
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 129

Conread position: 86-470
Cow position: chr7:54786397-54786021 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 262
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 185, 28

Conread position: 89-552
Cow position: chr7:40268981-40268523 (view UCSC Genome Browser custom track)
Alignm length: 475
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 106

Conread position: 147-298
Cow position: chr7:24934477-24934324 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 122
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 35, 105

Conread position: 156-552
Cow position: chr7:6554-6938 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 262
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 179, 21

Conread position: 161-552
Cow position: chr7:57211223-57211607 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 101

Conread position: 181-552
Cow position: chr7:21311531-21311905 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 28

Conread position: 192-552
Cow position: chr7:66036264-66036626 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 135

Conread position: 216-552
Cow position: chr7:68439174-68439507 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 234
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 153, 55

Conread position: 255-552
Cow position: chr7:54649049-54649354 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 213
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 22, 0

Conread position: 282-552
Cow position: chr7:995938-996200 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 210
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 86, 116

Conread position: 306-542
Cow position: chr7:64350690-64350937 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 187
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 65, 163

Conread position: 307-552
Cow position: chr7:55041284-55041032 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 184
Alignm E-value: 8.99998e-41
Alignm gaps (pig, cow): 63, 0

Conread position: 310-520
Cow position: chr7:3124676-3124892 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 168
Alignm E-value: 8e-39
Alignm gaps (pig, cow): 60, 5

Conread position: 315-552
Cow position: chr7:445049-444805 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 188
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 55, 22

Conread position: 321-542
Cow position: chr7:27788170-27788391 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 169
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 38, 124

Conread position: 328-552
Cow position: chr7:48805214-48804983 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 163
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 42, 0

Conread position: 332-552
Cow position: chr7:24934312-24934099 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 172
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 137, 18

Conread position: 340-552
Cow position: chr7:8143747-8143522 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 168
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 30, 179

Conread position: 341-552
Cow position: chr7:40320432-40320635 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 171
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 26, 57

Conread position: 376-552
Cow position: chr7:59685091-59685265 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 137
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 154, 64

Conread position: 399-552
Cow position: chr7:39793169-39793322 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 120
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 64, 41

Conread position: 400-552
Cow position: chr7:49730502-49730658 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 123
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 49, 0

Conread position: 414-552
Cow position: chr7:34417164-34417024 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 117
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 50, 0

Conread position: 1-264
Cow position: chr8:45450389-45450652 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 196

Conread position: 1-295
Cow position: chr8:59141408-59141706 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 226

Conread position: 1-318
Cow position: chr8:8315376-8315054 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 0

Conread position: 1-324
Cow position: chr8:28878019-28877691 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 222

Conread position: 1-463
Cow position: chr8:11969198-11968730 (view UCSC Genome Browser custom track)
Alignm length: 494
Alignm identity: 362
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 260

Conread position: 1-472
Cow position: chr8:19865339-19865796 (view UCSC Genome Browser custom track)
Alignm length: 475
Alignm identity: 310
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 296, 180

Conread position: 1-512
Cow position: chr8:25408815-25409331 (view UCSC Genome Browser custom track)
Alignm length: 520
Alignm identity: 392
Alignm E-value: 0
Alignm gaps (pig, cow): 270, 192

Conread position: 1-552
Cow position: chr8:76499-75944 (view UCSC Genome Browser custom track)
Alignm length: 573
Alignm identity: 369
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 37, 78

Conread position: 1-552
Cow position: chr8:21789949-21790488 (view UCSC Genome Browser custom track)
Alignm length: 563
Alignm identity: 346
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 81, 15

Conread position: 1-552
Cow position: chr8:38606117-38605572 (view UCSC Genome Browser custom track)
Alignm length: 565
Alignm identity: 432
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 20

Conread position: 1-552
Cow position: chr8:42158902-42158364 (view UCSC Genome Browser custom track)
Alignm length: 560
Alignm identity: 425
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 195

Conread position: 1-552
Cow position: chr8:42485001-42485555 (view UCSC Genome Browser custom track)
Alignm length: 565
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 189

Conread position: 1-552
Cow position: chr8:49859677-49859127 (view UCSC Genome Browser custom track)
Alignm length: 565
Alignm identity: 424
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 104

Conread position: 1-552
Cow position: chr8:50960512-50959969 (view UCSC Genome Browser custom track)
Alignm length: 565
Alignm identity: 414
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 23

Conread position: 1-552
Cow position: chr8:58185493-58184953 (view UCSC Genome Browser custom track)
Alignm length: 561
Alignm identity: 437
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 128

Conread position: 1-552
Cow position: chr8:59261834-59261299 (view UCSC Genome Browser custom track)
Alignm length: 564
Alignm identity: 412
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 183

Conread position: 2-552
Cow position: chr8:39809402-39808857 (view UCSC Genome Browser custom track)
Alignm length: 560
Alignm identity: 355
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 255, 172

Conread position: 3-360
Cow position: chr8:11564624-11564974 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 249
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 35, 15

Conread position: 3-542
Cow position: chr8:30487295-30486746 (view UCSC Genome Browser custom track)
Alignm length: 556
Alignm identity: 406
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 18

Conread position: 3-550
Cow position: chr8:22571223-22570666 (view UCSC Genome Browser custom track)
Alignm length: 560
Alignm identity: 405
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 175

Conread position: 3-551
Cow position: chr8:56883587-56884171 (view UCSC Genome Browser custom track)
Alignm length: 587
Alignm identity: 410
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 544

Conread position: 3-552
Cow position: chr8:5681966-5681422 (view UCSC Genome Browser custom track)
Alignm length: 559
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 99

Conread position: 3-552
Cow position: chr8:8517501-8516956 (view UCSC Genome Browser custom track)
Alignm length: 568
Alignm identity: 389
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 149

Conread position: 3-552
Cow position: chr8:11763026-11763589 (view UCSC Genome Browser custom track)
Alignm length: 584
Alignm identity: 411
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 190

Conread position: 3-552
Cow position: chr8:21157704-21157150 (view UCSC Genome Browser custom track)
Alignm length: 570
Alignm identity: 423
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 285

Conread position: 3-552
Cow position: chr8:32436996-32436442 (view UCSC Genome Browser custom track)
Alignm length: 560
Alignm identity: 398
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 192

Conread position: 3-552
Cow position: chr8:32630941-32630392 (view UCSC Genome Browser custom track)
Alignm length: 561
Alignm identity: 415
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 189

Conread position: 3-552
Cow position: chr8:42419353-42418796 (view UCSC Genome Browser custom track)
Alignm length: 573
Alignm identity: 425
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 312

Conread position: 3-552
Cow position: chr8:42468750-42469308 (view UCSC Genome Browser custom track)
Alignm length: 579
Alignm identity: 410
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 5

Conread position: 3-552
Cow position: chr8:45691935-45691370 (view UCSC Genome Browser custom track)
Alignm length: 571
Alignm identity: 422
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 268

Conread position: 3-552
Cow position: chr8:47068726-47068166 (view UCSC Genome Browser custom track)
Alignm length: 567
Alignm identity: 385
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 373

Conread position: 4-289
Cow position: chr8:48787516-48787800 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 205
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 34, 114

Conread position: 4-552
Cow position: chr8:10749452-10749995 (view UCSC Genome Browser custom track)
Alignm length: 562
Alignm identity: 402
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 58

Conread position: 4-552
Cow position: chr8:42579491-42578944 (view UCSC Genome Browser custom track)
Alignm length: 558
Alignm identity: 407
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 136

Conread position: 6-516
Cow position: chr8:19330802-19331316 (view UCSC Genome Browser custom track)
Alignm length: 520
Alignm identity: 391
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 190

Conread position: 6-537
Cow position: chr8:17312113-17312660 (view UCSC Genome Browser custom track)
Alignm length: 549
Alignm identity: 411
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 450

Conread position: 6-551
Cow position: chr8:3855925-3855385 (view UCSC Genome Browser custom track)
Alignm length: 554
Alignm identity: 411
Alignm E-value: 0
Alignm gaps (pig, cow): 364, 15

Conread position: 6-552
Cow position: chr8:4687492-4688042 (view UCSC Genome Browser custom track)
Alignm length: 554
Alignm identity: 412
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 190

Conread position: 6-552
Cow position: chr8:5017269-5017827 (view UCSC Genome Browser custom track)
Alignm length: 562
Alignm identity: 430
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 190

Conread position: 6-552
Cow position: chr8:7161987-7162538 (view UCSC Genome Browser custom track)
Alignm length: 558
Alignm identity: 410
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 187

Conread position: 6-552
Cow position: chr8:8401025-8400472 (view UCSC Genome Browser custom track)
Alignm length: 558
Alignm identity: 413
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 78

Conread position: 6-552
Cow position: chr8:8911597-8912124 (view UCSC Genome Browser custom track)
Alignm length: 555
Alignm identity: 403
Alignm E-value: 0
Alignm gaps (pig, cow): 361, 43

Conread position: 6-552
Cow position: chr8:10742580-10742007 (view UCSC Genome Browser custom track)
Alignm length: 576
Alignm identity: 433
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 186

Conread position: 6-552
Cow position: chr8:11802912-11803463 (view UCSC Genome Browser custom track)
Alignm length: 562
Alignm identity: 414
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 178

Conread position: 6-552
Cow position: chr8:12450108-12450684 (view UCSC Genome Browser custom track)
Alignm length: 579
Alignm identity: 444
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 389

Conread position: 6-552
Cow position: chr8:14590812-14590238 (view UCSC Genome Browser custom track)
Alignm length: 578
Alignm identity: 430
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 186

Conread position: 6-552
Cow position: chr8:23771727-23772286 (view UCSC Genome Browser custom track)
Alignm length: 566
Alignm identity: 417
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 110

Conread position: 6-552
Cow position: chr8:24915246-24914679 (view UCSC Genome Browser custom track)
Alignm length: 578
Alignm identity: 426
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 195

Conread position: 6-552
Cow position: chr8:25523495-25524040 (view UCSC Genome Browser custom track)
Alignm length: 555
Alignm identity: 420
Alignm E-value: 0
Alignm gaps (pig, cow): 265, 108

Conread position: 6-552
Cow position: chr8:25775585-25775020 (view UCSC Genome Browser custom track)
Alignm length: 571
Alignm identity: 425
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 60

Conread position: 6-552
Cow position: chr8:29007732-29008271 (view UCSC Genome Browser custom track)
Alignm length: 551
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 265, 175

Conread position: 6-552
Cow position: chr8:36635409-36634869 (view UCSC Genome Browser custom track)
Alignm length: 558
Alignm identity: 410
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 23

Conread position: 6-552
Cow position: chr8:39195125-39194573 (view UCSC Genome Browser custom track)
Alignm length: 558
Alignm identity: 423
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 190

Conread position: 6-552
Cow position: chr8:41644581-41644044 (view UCSC Genome Browser custom track)
Alignm length: 557
Alignm identity: 433
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 139

Conread position: 6-552
Cow position: chr8:42656880-42656345 (view UCSC Genome Browser custom track)
Alignm length: 558
Alignm identity: 389
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 79

Conread position: 6-552
Cow position: chr8:46051277-46051825 (view UCSC Genome Browser custom track)
Alignm length: 560
Alignm identity: 425
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 123

Conread position: 6-552
Cow position: chr8:47661230-47660681 (view UCSC Genome Browser custom track)
Alignm length: 558
Alignm identity: 422
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 196

Conread position: 6-552
Cow position: chr8:50930040-50929474 (view UCSC Genome Browser custom track)
Alignm length: 573
Alignm identity: 417
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 447

Conread position: 6-552
Cow position: chr8:60061473-60062037 (view UCSC Genome Browser custom track)
Alignm length: 574
Alignm identity: 420
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 190

Conread position: 7-552
Cow position: chr8:47783705-47783175 (view UCSC Genome Browser custom track)
Alignm length: 559
Alignm identity: 362
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 35, 122

Conread position: 8-416
Cow position: chr8:25437410-25437831 (view UCSC Genome Browser custom track)
Alignm length: 428
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 18

Conread position: 9-273
Cow position: chr8:44243488-44243225 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 137

Conread position: 9-391
Cow position: chr8:11832802-11833214 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 269

Conread position: 9-434
Cow position: chr8:50287832-50287404 (view UCSC Genome Browser custom track)
Alignm length: 441
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 261

Conread position: 9-549
Cow position: chr8:12801506-12802051 (view UCSC Genome Browser custom track)
Alignm length: 559
Alignm identity: 421
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 132

Conread position: 9-552
Cow position: chr8:25377075-25377619 (view UCSC Genome Browser custom track)
Alignm length: 555
Alignm identity: 404
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 102

Conread position: 9-552
Cow position: chr8:32318459-32317902 (view UCSC Genome Browser custom track)
Alignm length: 561
Alignm identity: 413
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 187

Conread position: 9-552
Cow position: chr8:50994866-50995427 (view UCSC Genome Browser custom track)
Alignm length: 569
Alignm identity: 417
Alignm E-value: 0
Alignm gaps (pig, cow): 174, 135

Conread position: 21-479
Cow position: chr8:35212989-35213430 (view UCSC Genome Browser custom track)
Alignm length: 468
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 13

Conread position: 23-552
Cow position: chr8:14631557-14631023 (view UCSC Genome Browser custom track)
Alignm length: 541
Alignm identity: 394
Alignm E-value: 0
Alignm gaps (pig, cow): 253, 11

Conread position: 25-523
Cow position: chr8:11524847-11525324 (view UCSC Genome Browser custom track)
Alignm length: 503
Alignm identity: 331
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 10, 33

Conread position: 33-525
Cow position: chr8:44662577-44662093 (view UCSC Genome Browser custom track)
Alignm length: 501
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 27

Conread position: 34-390
Cow position: chr8:41944831-41945176 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 155, 246

Conread position: 39-552
Cow position: chr8:1348140-1347610 (view UCSC Genome Browser custom track)
Alignm length: 532
Alignm identity: 393
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 235

Conread position: 43-313
Cow position: chr8:45449908-45450171 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 0

Conread position: 43-552
Cow position: chr8:47673979-47674486 (view UCSC Genome Browser custom track)
Alignm length: 518
Alignm identity: 402
Alignm E-value: 0
Alignm gaps (pig, cow): 228, 150

Conread position: 82-552
Cow position: chr8:54017378-54016907 (view UCSC Genome Browser custom track)
Alignm length: 481
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 194, 48

Conread position: 84-552
Cow position: chr8:38391811-38392268 (view UCSC Genome Browser custom track)
Alignm length: 477
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 187, 109

Conread position: 87-549
Cow position: chr8:4305221-4305689 (view UCSC Genome Browser custom track)
Alignm length: 481
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 289

Conread position: 100-551
Cow position: chr8:32522159-32522610 (view UCSC Genome Browser custom track)
Alignm length: 459
Alignm identity: 280
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 269, 160

Conread position: 117-324
Cow position: chr8:56039745-56039955 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 154
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 73, 0

Conread position: 120-552
Cow position: chr8:47075352-47075802 (view UCSC Genome Browser custom track)
Alignm length: 454
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 206

Conread position: 150-552
Cow position: chr8:19051684-19052092 (view UCSC Genome Browser custom track)
Alignm length: 413
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 11

Conread position: 155-523
Cow position: chr8:49215973-49216339 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 38

Conread position: 155-552
Cow position: chr8:53427738-53428127 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 33

Conread position: 158-545
Cow position: chr8:15409032-15409427 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 281
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 80, 21

Conread position: 158-552
Cow position: chr8:41740005-41740394 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 269
Alignm E-value: 9.00054e-42
Alignm gaps (pig, cow): 41, 82

Conread position: 163-552
Cow position: chr8:31984378-31984777 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 281
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 70, 30

Conread position: 194-550
Cow position: chr8:30496279-30495938 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 255
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 76, 7

Conread position: 198-552
Cow position: chr8:23135328-23134969 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 107, 99

Conread position: 216-441
Cow position: chr8:32503888-32503656 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 165
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 42, 137

Conread position: 251-545
Cow position: chr8:44108039-44108350 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 215

Conread position: 254-430
Cow position: chr8:44699534-44699719 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 133
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 42, 0

Conread position: 270-550
Cow position: chr8:37656204-37655917 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 203
Alignm E-value: 9.00054e-42
Alignm gaps (pig, cow): 97, 0

Conread position: 303-552
Cow position: chr8:49697600-49697348 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 186
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 61, 25

Conread position: 308-552
Cow position: chr8:28878407-28878655 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 184
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 65, 129

Conread position: 328-552
Cow position: chr8:21204997-21205215 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 176
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 41, 23

Conread position: 332-552
Cow position: chr8:31251919-31252135 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 167
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 38, 66

Conread position: 332-552
Cow position: chr8:40892053-40891839 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 169
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 38, 19

Conread position: 434-552
Cow position: chr8:41945413-41945533 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 98
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 30, 0

Conread position: 1-203
Cow position: chr9:64119959-64120156 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 155
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 42, 82

Conread position: 1-424
Cow position: chr9:22432011-22432435 (view UCSC Genome Browser custom track)
Alignm length: 434
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 228

Conread position: 1-551
Cow position: chr9:1981008-1981559 (view UCSC Genome Browser custom track)
Alignm length: 563
Alignm identity: 426
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 197

Conread position: 1-552
Cow position: chr9:651278-650732 (view UCSC Genome Browser custom track)
Alignm length: 564
Alignm identity: 422
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 205

Conread position: 1-552
Cow position: chr9:828399-827812 (view UCSC Genome Browser custom track)
Alignm length: 589
Alignm identity: 423
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 198

Conread position: 1-552
Cow position: chr9:25187845-25188390 (view UCSC Genome Browser custom track)
Alignm length: 562
Alignm identity: 430
Alignm E-value: 0
Alignm gaps (pig, cow): 219, 42

Conread position: 2-483
Cow position: chr9:43664539-43664986 (view UCSC Genome Browser custom track)
Alignm length: 486
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 461, 41

Conread position: 3-319
Cow position: chr9:2210031-2210367 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 15

Conread position: 3-411
Cow position: chr9:45874072-45874491 (view UCSC Genome Browser custom track)
Alignm length: 421
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 350

Conread position: 3-476
Cow position: chr9:3804282-3804767 (view UCSC Genome Browser custom track)
Alignm length: 493
Alignm identity: 363
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 266

Conread position: 3-478
Cow position: chr9:48808593-48808137 (view UCSC Genome Browser custom track)
Alignm length: 483
Alignm identity: 300
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 258, 39

Conread position: 3-521
Cow position: chr9:8166144-8165614 (view UCSC Genome Browser custom track)
Alignm length: 537
Alignm identity: 382
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 177

Conread position: 3-522
Cow position: chr9:28655087-28655613 (view UCSC Genome Browser custom track)
Alignm length: 535
Alignm identity: 363
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 196

Conread position: 3-552
Cow position: chr9:2211874-2212433 (view UCSC Genome Browser custom track)
Alignm length: 569
Alignm identity: 380
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 152

Conread position: 3-552
Cow position: chr9:3005513-3004951 (view UCSC Genome Browser custom track)
Alignm length: 573
Alignm identity: 413
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 323

Conread position: 3-552
Cow position: chr9:17063651-17063091 (view UCSC Genome Browser custom track)
Alignm length: 565
Alignm identity: 415
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 327

Conread position: 3-552
Cow position: chr9:28678708-28679268 (view UCSC Genome Browser custom track)
Alignm length: 562
Alignm identity: 410
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 178

Conread position: 3-552
Cow position: chr9:31065456-31066011 (view UCSC Genome Browser custom track)
Alignm length: 561
Alignm identity: 401
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 114

Conread position: 3-552
Cow position: chr9:50791450-50792006 (view UCSC Genome Browser custom track)
Alignm length: 558
Alignm identity: 402
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 192

Conread position: 5-551
Cow position: chr9:13475046-13474481 (view UCSC Genome Browser custom track)
Alignm length: 576
Alignm identity: 431
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 70

Conread position: 5-552
Cow position: chr9:4533234-4533786 (view UCSC Genome Browser custom track)
Alignm length: 562
Alignm identity: 415
Alignm E-value: 0
Alignm gaps (pig, cow): 272, 136

Conread position: 5-552
Cow position: chr9:44818899-44819437 (view UCSC Genome Browser custom track)
Alignm length: 552
Alignm identity: 421
Alignm E-value: 0
Alignm gaps (pig, cow): 266, 41

Conread position: 5-552
Cow position: chr9:59482053-59481504 (view UCSC Genome Browser custom track)
Alignm length: 563
Alignm identity: 420
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 140

Conread position: 6-148
Cow position: chr9:6829574-6829432 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 110
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 6-295
Cow position: chr9:26102350-26102071 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 184

Conread position: 6-551
Cow position: chr9:18509072-18508531 (view UCSC Genome Browser custom track)
Alignm length: 558
Alignm identity: 411
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 180

Conread position: 6-552
Cow position: chr9:5004715-5005278 (view UCSC Genome Browser custom track)
Alignm length: 570
Alignm identity: 415
Alignm E-value: 0
Alignm gaps (pig, cow): 254, 187

Conread position: 6-552
Cow position: chr9:6250041-6250594 (view UCSC Genome Browser custom track)
Alignm length: 558
Alignm identity: 423
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 78

Conread position: 6-552
Cow position: chr9:10322545-10323097 (view UCSC Genome Browser custom track)
Alignm length: 560
Alignm identity: 411
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 118

Conread position: 6-552
Cow position: chr9:10937337-10937888 (view UCSC Genome Browser custom track)
Alignm length: 556
Alignm identity: 413
Alignm E-value: 0
Alignm gaps (pig, cow): 265, 425

Conread position: 6-552
Cow position: chr9:17305236-17304682 (view UCSC Genome Browser custom track)
Alignm length: 559
Alignm identity: 415
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 190

Conread position: 6-552
Cow position: chr9:21410034-21410594 (view UCSC Genome Browser custom track)
Alignm length: 562
Alignm identity: 429
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 514

Conread position: 6-552
Cow position: chr9:22654313-22654872 (view UCSC Genome Browser custom track)
Alignm length: 561
Alignm identity: 427
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 513

Conread position: 6-552
Cow position: chr9:28022545-28023096 (view UCSC Genome Browser custom track)
Alignm length: 556
Alignm identity: 408
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 123

Conread position: 6-552
Cow position: chr9:29628009-29627458 (view UCSC Genome Browser custom track)
Alignm length: 560
Alignm identity: 420
Alignm E-value: 0
Alignm gaps (pig, cow): 175, 195

Conread position: 6-552
Cow position: chr9:30673107-30673673 (view UCSC Genome Browser custom track)
Alignm length: 567
Alignm identity: 423
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 0

Conread position: 6-552
Cow position: chr9:32969691-32970237 (view UCSC Genome Browser custom track)
Alignm length: 558
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 363, 187

Conread position: 6-552
Cow position: chr9:37162072-37161517 (view UCSC Genome Browser custom track)
Alignm length: 560
Alignm identity: 429
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 177

Conread position: 6-552
Cow position: chr9:42310424-42310971 (view UCSC Genome Browser custom track)
Alignm length: 556
Alignm identity: 417
Alignm E-value: 0
Alignm gaps (pig, cow): 265, 175

Conread position: 6-552
Cow position: chr9:59536837-59537391 (view UCSC Genome Browser custom track)
Alignm length: 560
Alignm identity: 414
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 188

Conread position: 6-552
Cow position: chr9:60277274-60276723 (view UCSC Genome Browser custom track)
Alignm length: 560
Alignm identity: 419
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 184

Conread position: 7-380
Cow position: chr9:5515163-5515535 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 157, 14

Conread position: 7-540
Cow position: chr9:25633263-25632738 (view UCSC Genome Browser custom track)
Alignm length: 547
Alignm identity: 379
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 60

Conread position: 9-550
Cow position: chr9:7061338-7060785 (view UCSC Genome Browser custom track)
Alignm length: 559
Alignm identity: 420
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 114

Conread position: 9-552
Cow position: chr9:29027464-29026914 (view UCSC Genome Browser custom track)
Alignm length: 556
Alignm identity: 415
Alignm E-value: 0
Alignm gaps (pig, cow): 187, 172

Conread position: 9-552
Cow position: chr9:51181441-51180886 (view UCSC Genome Browser custom track)
Alignm length: 560
Alignm identity: 424
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 450

Conread position: 10-552
Cow position: chr9:31808323-31808877 (view UCSC Genome Browser custom track)
Alignm length: 557
Alignm identity: 415
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 96

Conread position: 18-527
Cow position: chr9:221774-221255 (view UCSC Genome Browser custom track)
Alignm length: 532
Alignm identity: 383
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 7

Conread position: 21-552
Cow position: chr9:59427793-59428299 (view UCSC Genome Browser custom track)
Alignm length: 541
Alignm identity: 392
Alignm E-value: 0
Alignm gaps (pig, cow): 345, 22

Conread position: 30-539
Cow position: chr9:4282742-4283254 (view UCSC Genome Browser custom track)
Alignm length: 522
Alignm identity: 384
Alignm E-value: 0
Alignm gaps (pig, cow): 230, 51

Conread position: 30-540
Cow position: chr9:50698071-50698583 (view UCSC Genome Browser custom track)
Alignm length: 515
Alignm identity: 389
Alignm E-value: 0
Alignm gaps (pig, cow): 240, 12

Conread position: 31-292
Cow position: chr9:2186636-2186910 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 32

Conread position: 32-552
Cow position: chr9:62737023-62736502 (view UCSC Genome Browser custom track)
Alignm length: 538
Alignm identity: 337
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 9, 69

Conread position: 39-380
Cow position: chr9:27035459-27035805 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 232, 154

Conread position: 39-552
Cow position: chr9:9013871-9014368 (view UCSC Genome Browser custom track)
Alignm length: 523
Alignm identity: 394
Alignm E-value: 0
Alignm gaps (pig, cow): 152, 262

Conread position: 40-552
Cow position: chr9:130411-129870 (view UCSC Genome Browser custom track)
Alignm length: 544
Alignm identity: 385
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 447

Conread position: 60-552
Cow position: chr9:27782982-27783484 (view UCSC Genome Browser custom track)
Alignm length: 504
Alignm identity: 379
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 456

Conread position: 86-552
Cow position: chr9:44384082-44384556 (view UCSC Genome Browser custom track)
Alignm length: 475
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 190, 0

Conread position: 94-552
Cow position: chr9:46042384-46041955 (view UCSC Genome Browser custom track)
Alignm length: 464
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 281, 26

Conread position: 114-552
Cow position: chr9:1995540-1995093 (view UCSC Genome Browser custom track)
Alignm length: 449
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 157, 401

Conread position: 145-552
Cow position: chr9:3372408-3372032 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 287
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 295, 54

Conread position: 157-552
Cow position: chr9:2871221-2871622 (view UCSC Genome Browser custom track)
Alignm length: 408
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 145

Conread position: 159-360
Cow position: chr9:1637562-1637751 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 151
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 38, 29

Conread position: 160-552
Cow position: chr9:19158645-19158241 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 289

Conread position: 216-371
Cow position: chr9:18211173-18211333 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 132
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 27, 0

Conread position: 220-539
Cow position: chr9:20308054-20307728 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 124

Conread position: 227-552
Cow position: chr9:20939285-20939604 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 142, 37

Conread position: 231-499
Cow position: chr9:59447314-59447577 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 130, 161

Conread position: 251-540
Cow position: chr9:2053912-2054204 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 218
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 116, 51

Conread position: 258-552
Cow position: chr9:59447513-59447803 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 172
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 30, 11

Conread position: 286-552
Cow position: chr9:38677173-38677440 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 207
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 13

Conread position: 292-546
Cow position: chr9:26736781-26737042 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 222

Conread position: 332-552
Cow position: chr9:3224550-3224345 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 154
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 34, 0

Conread position: 332-552
Cow position: chr9:20176647-20176413 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 164
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 38, 66

Conread position: 370-552
Cow position: chr9:18211363-18211544 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 142
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 11, 136

Conread position: 384-552
Cow position: chr9:26567728-26567895 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 129
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 79, 104

Conread position: 1-411
Cow position: chrX:6282118-6281695 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 0

Conread position: 1-489
Cow position: chrX:23132616-23133103 (view UCSC Genome Browser custom track)
Alignm length: 499
Alignm identity: 367
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 147

Conread position: 1-549
Cow position: chrX:29286071-29286628 (view UCSC Genome Browser custom track)
Alignm length: 564
Alignm identity: 441
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 443

Conread position: 1-549
Cow position: chrX:41850555-41850015 (view UCSC Genome Browser custom track)
Alignm length: 562
Alignm identity: 426
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 199

Conread position: 1-552
Cow position: chrX:4796969-4797487 (view UCSC Genome Browser custom track)
Alignm length: 554
Alignm identity: 416
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 33

Conread position: 1-552
Cow position: chrX:11492345-11492891 (view UCSC Genome Browser custom track)
Alignm length: 570
Alignm identity: 362
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 34, 15

Conread position: 1-552
Cow position: chrX:12343578-12344138 (view UCSC Genome Browser custom track)
Alignm length: 563
Alignm identity: 393
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 24

Conread position: 1-552
Cow position: chrX:21059424-21059965 (view UCSC Genome Browser custom track)
Alignm length: 562
Alignm identity: 425
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 62

Conread position: 1-552
Cow position: chrX:28554252-28554835 (view UCSC Genome Browser custom track)
Alignm length: 588
Alignm identity: 408
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 182

Conread position: 1-552
Cow position: chrX:28626993-28626430 (view UCSC Genome Browser custom track)
Alignm length: 567
Alignm identity: 420
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 253

Conread position: 1-552
Cow position: chrX:28650908-28650349 (view UCSC Genome Browser custom track)
Alignm length: 564
Alignm identity: 430
Alignm E-value: 0
Alignm gaps (pig, cow): 137, 30

Conread position: 2-366
Cow position: chrX:16015795-16015411 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 0

Conread position: 2-552
Cow position: chrX:23389874-23389318 (view UCSC Genome Browser custom track)
Alignm length: 564
Alignm identity: 430
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 194

Conread position: 3-387
Cow position: chrX:2102829-2103221 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 190

Conread position: 3-427
Cow position: chrX:979239-979671 (view UCSC Genome Browser custom track)
Alignm length: 434
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 192

Conread position: 3-506
Cow position: chrX:22618655-22618154 (view UCSC Genome Browser custom track)
Alignm length: 515
Alignm identity: 374
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 182

Conread position: 3-549
Cow position: chrX:41102822-41102275 (view UCSC Genome Browser custom track)
Alignm length: 561
Alignm identity: 386
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 193

Conread position: 3-552
Cow position: chrX:983306-983866 (view UCSC Genome Browser custom track)
Alignm length: 562
Alignm identity: 409
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 192

Conread position: 3-552
Cow position: chrX:1834462-1835015 (view UCSC Genome Browser custom track)
Alignm length: 562
Alignm identity: 406
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 182

Conread position: 3-552
Cow position: chrX:6872429-6871873 (view UCSC Genome Browser custom track)
Alignm length: 562
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 350

Conread position: 3-552
Cow position: chrX:7031104-7031665 (view UCSC Genome Browser custom track)
Alignm length: 564
Alignm identity: 404
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 193

Conread position: 3-552
Cow position: chrX:7752550-7753108 (view UCSC Genome Browser custom track)
Alignm length: 568
Alignm identity: 405
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 15

Conread position: 3-552
Cow position: chrX:8480293-8480859 (view UCSC Genome Browser custom track)
Alignm length: 568
Alignm identity: 406
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 446

Conread position: 3-552
Cow position: chrX:12183560-12184145 (view UCSC Genome Browser custom track)
Alignm length: 590
Alignm identity: 417
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 90

Conread position: 3-552
Cow position: chrX:12315112-12314558 (view UCSC Genome Browser custom track)
Alignm length: 565
Alignm identity: 442
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 189

Conread position: 3-552
Cow position: chrX:12669105-12668547 (view UCSC Genome Browser custom track)
Alignm length: 562
Alignm identity: 406
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 179

Conread position: 3-552
Cow position: chrX:13053651-13054214 (view UCSC Genome Browser custom track)
Alignm length: 580
Alignm identity: 433
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 87

Conread position: 3-552
Cow position: chrX:14460167-14460717 (view UCSC Genome Browser custom track)
Alignm length: 560
Alignm identity: 394
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 192

Conread position: 3-552
Cow position: chrX:16811799-16811245 (view UCSC Genome Browser custom track)
Alignm length: 562
Alignm identity: 403
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 192

Conread position: 3-552
Cow position: chrX:18659144-18658608 (view UCSC Genome Browser custom track)
Alignm length: 560
Alignm identity: 393
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 147

Conread position: 3-552
Cow position: chrX:21589611-21590188 (view UCSC Genome Browser custom track)
Alignm length: 585
Alignm identity: 424
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 480

Conread position: 3-552
Cow position: chrX:24324937-24324365 (view UCSC Genome Browser custom track)
Alignm length: 576
Alignm identity: 392
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 199

Conread position: 3-552
Cow position: chrX:24808952-24808403 (view UCSC Genome Browser custom track)
Alignm length: 561
Alignm identity: 343
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 174, 140

Conread position: 3-552
Cow position: chrX:29173119-29172560 (view UCSC Genome Browser custom track)
Alignm length: 561
Alignm identity: 402
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 192

Conread position: 3-552
Cow position: chrX:29910781-29910228 (view UCSC Genome Browser custom track)
Alignm length: 561
Alignm identity: 403
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 190

Conread position: 3-552
Cow position: chrX:29949961-29949397 (view UCSC Genome Browser custom track)
Alignm length: 569
Alignm identity: 429
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 203

Conread position: 3-552
Cow position: chrX:30171189-30170644 (view UCSC Genome Browser custom track)
Alignm length: 563
Alignm identity: 404
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 154

Conread position: 3-552
Cow position: chrX:39563291-39562749 (view UCSC Genome Browser custom track)
Alignm length: 556
Alignm identity: 412
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 114

Conread position: 4-552
Cow position: chrX:21269416-21268849 (view UCSC Genome Browser custom track)
Alignm length: 574
Alignm identity: 397
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 111

Conread position: 5-536
Cow position: chrX:26999238-26999754 (view UCSC Genome Browser custom track)
Alignm length: 541
Alignm identity: 375
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 14

Conread position: 5-552
Cow position: chrX:7482278-7482834 (view UCSC Genome Browser custom track)
Alignm length: 561
Alignm identity: 406
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 187

Conread position: 5-552
Cow position: chrX:14595491-14596047 (view UCSC Genome Browser custom track)
Alignm length: 563
Alignm identity: 421
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 250

Conread position: 5-552
Cow position: chrX:16276294-16276850 (view UCSC Genome Browser custom track)
Alignm length: 561
Alignm identity: 402
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 16

Conread position: 5-552
Cow position: chrX:23455371-23454819 (view UCSC Genome Browser custom track)
Alignm length: 560
Alignm identity: 433
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 191

Conread position: 6-517
Cow position: chrX:29852918-29852396 (view UCSC Genome Browser custom track)
Alignm length: 529
Alignm identity: 400
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 187

Conread position: 6-545
Cow position: chrX:22488792-22489348 (view UCSC Genome Browser custom track)
Alignm length: 561
Alignm identity: 404
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 187

Conread position: 6-546
Cow position: chrX:13412485-13411944 (view UCSC Genome Browser custom track)
Alignm length: 550
Alignm identity: 416
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 187

Conread position: 6-546
Cow position: chrX:26528625-26529162 (view UCSC Genome Browser custom track)
Alignm length: 548
Alignm identity: 411
Alignm E-value: 0
Alignm gaps (pig, cow): 363, 187

Conread position: 6-551
Cow position: chrX:26766563-26766000 (view UCSC Genome Browser custom track)
Alignm length: 569
Alignm identity: 410
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 300

Conread position: 6-552
Cow position: chrX:971422-971972 (view UCSC Genome Browser custom track)
Alignm length: 563
Alignm identity: 426
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 312

Conread position: 6-552
Cow position: chrX:1547623-1548180 (view UCSC Genome Browser custom track)
Alignm length: 560
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 175, 448

Conread position: 6-552
Cow position: chrX:15126589-15126026 (view UCSC Genome Browser custom track)
Alignm length: 567
Alignm identity: 426
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 455

Conread position: 6-552
Cow position: chrX:21580115-21580685 (view UCSC Genome Browser custom track)
Alignm length: 573
Alignm identity: 417
Alignm E-value: 0
Alignm gaps (pig, cow): 265, 186

Conread position: 6-552
Cow position: chrX:21830178-21830719 (view UCSC Genome Browser custom track)
Alignm length: 556
Alignm identity: 420
Alignm E-value: 0
Alignm gaps (pig, cow): 190, 175

Conread position: 6-552
Cow position: chrX:23019976-23020500 (view UCSC Genome Browser custom track)
Alignm length: 554
Alignm identity: 400
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 188

Conread position: 6-552
Cow position: chrX:23040475-23039926 (view UCSC Genome Browser custom track)
Alignm length: 559
Alignm identity: 430
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 183

Conread position: 6-552
Cow position: chrX:23277673-23278221 (view UCSC Genome Browser custom track)
Alignm length: 559
Alignm identity: 426
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 190

Conread position: 6-552
Cow position: chrX:30183271-30182728 (view UCSC Genome Browser custom track)
Alignm length: 568
Alignm identity: 401
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 49

Conread position: 6-552
Cow position: chrX:30231449-30230899 (view UCSC Genome Browser custom track)
Alignm length: 561
Alignm identity: 417
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 20

Conread position: 6-552
Cow position: chrX:38148240-38148798 (view UCSC Genome Browser custom track)
Alignm length: 561
Alignm identity: 433
Alignm E-value: 0
Alignm gaps (pig, cow): 175, 448

Conread position: 7-295
Cow position: chrX:27006136-27006432 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 200
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 16, 69

Conread position: 8-96
Cow position: chrX:30712239-30712327 (view UCSC Genome Browser custom track)
Alignm length: 89
Alignm identity: 76
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 8-367
Cow position: chrX:38890640-38891000 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 234
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 16, 10

Conread position: 8-552
Cow position: chrX:16779956-16780488 (view UCSC Genome Browser custom track)
Alignm length: 567
Alignm identity: 401
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 90

Conread position: 9-552
Cow position: chrX:9093208-9093778 (view UCSC Genome Browser custom track)
Alignm length: 573
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 325

Conread position: 9-552
Cow position: chrX:18953031-18952477 (view UCSC Genome Browser custom track)
Alignm length: 562
Alignm identity: 423
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 146

Conread position: 9-552
Cow position: chrX:27315924-27316478 (view UCSC Genome Browser custom track)
Alignm length: 558
Alignm identity: 419
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 188

Conread position: 9-552
Cow position: chrX:27593340-27592786 (view UCSC Genome Browser custom track)
Alignm length: 558
Alignm identity: 436
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 384

Conread position: 10-552
Cow position: chrX:44388420-44388960 (view UCSC Genome Browser custom track)
Alignm length: 555
Alignm identity: 428
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 196

Conread position: 11-458
Cow position: chrX:16041552-16041082 (view UCSC Genome Browser custom track)
Alignm length: 472
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 193

Conread position: 11-552
Cow position: chrX:29793382-29792831 (view UCSC Genome Browser custom track)
Alignm length: 556
Alignm identity: 421
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 283

Conread position: 12-474
Cow position: chrX:12461473-12461938 (view UCSC Genome Browser custom track)
Alignm length: 479
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 7

Conread position: 12-552
Cow position: chrX:27987173-27986628 (view UCSC Genome Browser custom track)
Alignm length: 557
Alignm identity: 398
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 14

Conread position: 14-550
Cow position: chrX:30366122-30365600 (view UCSC Genome Browser custom track)
Alignm length: 546
Alignm identity: 400
Alignm E-value: 0
Alignm gaps (pig, cow): 257, 29

Conread position: 21-525
Cow position: chrX:26426901-26426408 (view UCSC Genome Browser custom track)
Alignm length: 512
Alignm identity: 360
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 16

Conread position: 21-552
Cow position: chrX:2535405-2534870 (view UCSC Genome Browser custom track)
Alignm length: 539
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 349, 414

Conread position: 23-296
Cow position: chrX:33707102-33707372 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 188
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 21, 35

Conread position: 31-526
Cow position: chrX:41888306-41887825 (view UCSC Genome Browser custom track)
Alignm length: 509
Alignm identity: 332
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 12, 66

Conread position: 34-552
Cow position: chrX:15487072-15486579 (view UCSC Genome Browser custom track)
Alignm length: 526
Alignm identity: 393
Alignm E-value: 0
Alignm gaps (pig, cow): 335, 146

Conread position: 34-552
Cow position: chrX:27425648-27425122 (view UCSC Genome Browser custom track)
Alignm length: 528
Alignm identity: 385
Alignm E-value: 0
Alignm gaps (pig, cow): 237, 158

Conread position: 37-552
Cow position: chrX:5296868-5296355 (view UCSC Genome Browser custom track)
Alignm length: 525
Alignm identity: 387
Alignm E-value: 0
Alignm gaps (pig, cow): 142, 259

Conread position: 39-239
Cow position: chrX:24377675-24377880 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 163
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 120, 146

Conread position: 39-552
Cow position: chrX:5669945-5669467 (view UCSC Genome Browser custom track)
Alignm length: 517
Alignm identity: 333
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 27, 61

Conread position: 39-552
Cow position: chrX:15980274-15979757 (view UCSC Genome Browser custom track)
Alignm length: 522
Alignm identity: 377
Alignm E-value: 0
Alignm gaps (pig, cow): 237, 41

Conread position: 41-359
Cow position: chrX:45444434-45444760 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 230
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 77, 6

Conread position: 45-357
Cow position: chrX:21276222-21275916 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 203
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 157, 129

Conread position: 46-550
Cow position: chrX:29885676-29886190 (view UCSC Genome Browser custom track)
Alignm length: 516
Alignm identity: 376
Alignm E-value: 0
Alignm gaps (pig, cow): 142, 470

Conread position: 49-552
Cow position: chrX:34219004-34219502 (view UCSC Genome Browser custom track)
Alignm length: 513
Alignm identity: 401
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 7

Conread position: 82-482
Cow position: chrX:15590706-15591112 (view UCSC Genome Browser custom track)
Alignm length: 413
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 114, 359

Conread position: 87-552
Cow position: chrX:27619410-27618931 (view UCSC Genome Browser custom track)
Alignm length: 480
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 0

Conread position: 88-552
Cow position: chrX:21490895-21491364 (view UCSC Genome Browser custom track)
Alignm length: 485
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 107, 178

Conread position: 90-552
Cow position: chrX:3467902-3467444 (view UCSC Genome Browser custom track)
Alignm length: 471
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 268, 173

Conread position: 95-552
Cow position: chrX:27961594-27962054 (view UCSC Genome Browser custom track)
Alignm length: 469
Alignm identity: 351
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 255

Conread position: 96-552
Cow position: chrX:17667043-17666593 (view UCSC Genome Browser custom track)
Alignm length: 465
Alignm identity: 366
Alignm E-value: 0
Alignm gaps (pig, cow): 174, 46

Conread position: 103-552
Cow position: chrX:31199300-31199757 (view UCSC Genome Browser custom track)
Alignm length: 466
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 31

Conread position: 105-371
Cow position: chrX:21971567-21971833 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 180
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 101, 74

Conread position: 111-552
Cow position: chrX:35940495-35940074 (view UCSC Genome Browser custom track)
Alignm length: 449
Alignm identity: 304
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 160, 68

Conread position: 113-551
Cow position: chrX:30138825-30138375 (view UCSC Genome Browser custom track)
Alignm length: 452
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 222

Conread position: 115-546
Cow position: chrX:45377347-45376898 (view UCSC Genome Browser custom track)
Alignm length: 456
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 74

Conread position: 135-552
Cow position: chrX:36136783-36136365 (view UCSC Genome Browser custom track)
Alignm length: 434
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 197

Conread position: 150-552
Cow position: chrX:8610911-8610503 (view UCSC Genome Browser custom track)
Alignm length: 415
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 61

Conread position: 159-552
Cow position: chrX:16463513-16463116 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 16

Conread position: 163-552
Cow position: chrX:18535257-18535618 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 278
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 89, 214

Conread position: 166-409
Cow position: chrX:6249668-6249415 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 180
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 102, 25

Conread position: 169-552
Cow position: chrX:37014935-37015324 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 107, 23

Conread position: 194-552
Cow position: chrX:30069009-30068649 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 193, 176

Conread position: 208-457
Cow position: chrX:5372183-5371939 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 182
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 62, 45

Conread position: 226-552
Cow position: chrX:15600029-15600348 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 90

Conread position: 285-552
Cow position: chrX:27083895-27084168 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 198
Alignm E-value: 8.00141e-43
Alignm gaps (pig, cow): 85, 218

Conread position: 289-552
Cow position: chrX:20035470-20035200 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 154
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 80, 0

Conread position: 316-551
Cow position: chrX:24771904-24771662 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 176
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 54, 0

Conread position: 368-552
Cow position: chrX:16684821-16684635 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 130
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 95, 0

Conread position: 395-552
Cow position: chrX:28757603-28757444 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 114
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 68, 0

Conread position: 426-552
Cow position: chrX:12284014-12284140 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 98
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 102, 35