Cow genome map

Conread name: Liv1-LVRM1F040191

Conread position: 3-422
Cow position: chr1:78919565-78919968 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 72

Conread position: 6-238
Cow position: chr1:73285548-73285782 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 177
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 46, 82

Conread position: 7-308
Cow position: chr1:88377120-88376814 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 22

Conread position: 7-428
Cow position: chr1:66687122-66686691 (view UCSC Genome Browser custom track)
Alignm length: 440
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 70

Conread position: 35-172
Cow position: chr1:101985067-101984926 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 108
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 42, 0

Conread position: 104-423
Cow position: chr1:21362978-21362640 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 232
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 36, 145

Conread position: 105-276
Cow position: chr1:97045929-97045754 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 146
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 52, 0

Conread position: 266-428
Cow position: chr1:97045533-97045366 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 127
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 53, 40

Conread position: 10-428
Cow position: chr10:16475209-16475631 (view UCSC Genome Browser custom track)
Alignm length: 435
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 9

Conread position: 47-423
Cow position: chr10:40460230-40460603 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 264
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 31, 105

Conread position: 48-271
Cow position: chr10:50589788-50590004 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 170
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 27, 103

Conread position: 48-275
Cow position: chr10:50622401-50622174 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 178
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 27, 103

Conread position: 170-319
Cow position: chr10:50310515-50310664 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 117
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 2-426
Cow position: chr11:61707899-61707499 (view UCSC Genome Browser custom track)
Alignm length: 432
Alignm identity: 296
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 161, 73

Conread position: 6-422
Cow position: chr11:1501258-1500831 (view UCSC Genome Browser custom track)
Alignm length: 436
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 67

Conread position: 12-424
Cow position: chr11:9705400-9704990 (view UCSC Genome Browser custom track)
Alignm length: 428
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 45

Conread position: 16-428
Cow position: chr11:14730433-14730012 (view UCSC Genome Browser custom track)
Alignm length: 422
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 0

Conread position: 62-428
Cow position: chr11:26566577-26566208 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 13

Conread position: 6-379
Cow position: chr13:38539066-38538688 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 189

Conread position: 3-426
Cow position: chr14:47640163-47640597 (view UCSC Genome Browser custom track)
Alignm length: 441
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 70

Conread position: 3-428
Cow position: chr14:21742632-21743054 (view UCSC Genome Browser custom track)
Alignm length: 440
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 22

Conread position: 56-353
Cow position: chr14:30668040-30667740 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 220
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 36, 19

Conread position: 86-277
Cow position: chr15:21951383-21951190 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 135
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 50, 76

Conread position: 121-426
Cow position: chr15:53482493-53482197 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 207
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 45, 150

Conread position: 50-428
Cow position: chr16:42056413-42056042 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 25

Conread position: 161-260
Cow position: chr16:21418572-21418473 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 82
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 47-426
Cow position: chr17:38872390-38872769 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 163

Conread position: 88-428
Cow position: chr17:21416988-21417305 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 240, 65

Conread position: 6-332
Cow position: chr18:46009374-46009700 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 240
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 44, 73

Conread position: 6-425
Cow position: chr18:43658179-43658604 (view UCSC Genome Browser custom track)
Alignm length: 435
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 180

Conread position: 8-428
Cow position: chr18:15854529-15854916 (view UCSC Genome Browser custom track)
Alignm length: 428
Alignm identity: 296
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 59, 17

Conread position: 106-331
Cow position: chr18:55315847-55316073 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 157
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 51, 140

Conread position: 6-365
Cow position: chr2:11680316-11680669 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 245
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 44, 27

Conread position: 6-426
Cow position: chr2:47852203-47851782 (view UCSC Genome Browser custom track)
Alignm length: 432
Alignm identity: 285
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 72, 20

Conread position: 8-424
Cow position: chr2:49815728-49816148 (view UCSC Genome Browser custom track)
Alignm length: 438
Alignm identity: 295
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 23, 71

Conread position: 15-363
Cow position: chr2:54731730-54731379 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 256
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 33, 64

Conread position: 54-238
Cow position: chr2:28374377-28374561 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 138
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 38, 21

Conread position: 134-332
Cow position: chr2:39628652-39628847 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 145
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 23, 42

Conread position: 237-422
Cow position: chr2:28375123-28375317 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 142
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 101, 0

Conread position: 6-428
Cow position: chr20:13577621-13577193 (view UCSC Genome Browser custom track)
Alignm length: 439
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 72

Conread position: 6-428
Cow position: chr20:28462685-28463093 (view UCSC Genome Browser custom track)
Alignm length: 430
Alignm identity: 292
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 28, 15

Conread position: 1-421
Cow position: chr21:49323172-49323590 (view UCSC Genome Browser custom track)
Alignm length: 430
Alignm identity: 271
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 55, 78

Conread position: 2-428
Cow position: chr21:21945580-21945152 (view UCSC Genome Browser custom track)
Alignm length: 437
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 77

Conread position: 7-428
Cow position: chr21:1691309-1690884 (view UCSC Genome Browser custom track)
Alignm length: 435
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 163

Conread position: 2-383
Cow position: chr23:25846671-25847054 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 73

Conread position: 86-428
Cow position: chr23:22945614-22945265 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 153

Conread position: 2-426
Cow position: chr24:40122690-40122263 (view UCSC Genome Browser custom track)
Alignm length: 438
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 19

Conread position: 6-332
Cow position: chr24:6525650-6525326 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 31

Conread position: 6-427
Cow position: chr24:8584605-8585027 (view UCSC Genome Browser custom track)
Alignm length: 432
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 64

Conread position: 51-254
Cow position: chr24:40121938-40122132 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 151
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 24, 66

Conread position: 7-383
Cow position: chr25:18446976-18447350 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 130, 70

Conread position: 104-425
Cow position: chr25:33633695-33633392 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 227
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 51, 72

Conread position: 178-426
Cow position: chr25:24218532-24218276 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 205
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 57, 149

Conread position: 3-321
Cow position: chr26:5550711-5551033 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 73

Conread position: 6-354
Cow position: chr26:17997697-17997345 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 125

Conread position: 109-426
Cow position: chr27:25160172-25160488 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 225

Conread position: 6-322
Cow position: chr28:33247911-33248230 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 46

Conread position: 6-372
Cow position: chr28:10869925-10870306 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 45

Conread position: 4-426
Cow position: chr29:10843664-10844092 (view UCSC Genome Browser custom track)
Alignm length: 435
Alignm identity: 271
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 38, 29

Conread position: 35-326
Cow position: chr29:4054789-4055078 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 216
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 57, 13

Conread position: 47-426
Cow position: chr29:30262011-30261624 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 344

Conread position: 94-428
Cow position: chr29:3178501-3178168 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 98

Conread position: 168-424
Cow position: chr29:27844876-27845131 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 189
Alignm E-value: 0
Alignm gaps (pig, cow): 157, 25

Conread position: 6-425
Cow position: chr3:56395005-56395425 (view UCSC Genome Browser custom track)
Alignm length: 435
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 75

Conread position: 6-428
Cow position: chr3:10213596-10214016 (view UCSC Genome Browser custom track)
Alignm length: 433
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 69

Conread position: 7-236
Cow position: chr3:19891832-19891601 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 162
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 43, 72

Conread position: 21-312
Cow position: chr3:11788421-11788132 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 212
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 27, 11

Conread position: 90-422
Cow position: chr3:54785156-54785492 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 13

Conread position: 6-179
Cow position: chr4:33592717-33592885 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 131
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 45, 0

Conread position: 35-326
Cow position: chr4:14376128-14375836 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 208
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 15, 87

Conread position: 42-428
Cow position: chr4:38903353-38903741 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 33

Conread position: 48-243
Cow position: chr5:41977362-41977167 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 144
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 52, 146

Conread position: 86-299
Cow position: chr5:32311097-32310887 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 166
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 32, 86

Conread position: 1-427
Cow position: chr6:12528163-12528600 (view UCSC Genome Browser custom track)
Alignm length: 441
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 74

Conread position: 2-355
Cow position: chr6:13697678-13697324 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 254
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 86, 17

Conread position: 6-428
Cow position: chr6:61599022-61598586 (view UCSC Genome Browser custom track)
Alignm length: 439
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 73

Conread position: 7-405
Cow position: chr6:17931476-17931884 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 73

Conread position: 21-426
Cow position: chr6:16519279-16518874 (view UCSC Genome Browser custom track)
Alignm length: 416
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 58

Conread position: 86-243
Cow position: chr6:57302015-57302173 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 120
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 76, 0

Conread position: 95-423
Cow position: chr6:60170909-60170583 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 226, 62

Conread position: 146-346
Cow position: chr6:33901522-33901326 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 150
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 11, 45

Conread position: 6-308
Cow position: chr7:7212313-7212008 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 219
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 36, 59

Conread position: 6-424
Cow position: chr7:62443315-62442899 (view UCSC Genome Browser custom track)
Alignm length: 428
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 73

Conread position: 66-428
Cow position: chr7:5206434-5206792 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 253
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 89, 119

Conread position: 134-426
Cow position: chr7:43242697-43242388 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 228
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 10, 154

Conread position: 6-238
Cow position: chr8:2232584-2232337 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 173
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 30, 0

Conread position: 7-428
Cow position: chr8:37500936-37501355 (view UCSC Genome Browser custom track)
Alignm length: 436
Alignm identity: 295
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 44, 139

Conread position: 47-262
Cow position: chr8:21239874-21240096 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 149
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 28, 0

Conread position: 154-426
Cow position: chr8:8303409-8303680 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 21

Conread position: 1-427
Cow position: chr9:45474144-45473719 (view UCSC Genome Browser custom track)
Alignm length: 441
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 18

Conread position: 6-221
Cow position: chr9:35318420-35318197 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 162
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 26, 73

Conread position: 6-382
Cow position: chr9:25636181-25635795 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 69

Conread position: 7-424
Cow position: chr9:9331448-9331033 (view UCSC Genome Browser custom track)
Alignm length: 430
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 18

Conread position: 8-425
Cow position: chr9:4655389-4654958 (view UCSC Genome Browser custom track)
Alignm length: 440
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 71

Conread position: 24-426
Cow position: chr9:3228028-3227635 (view UCSC Genome Browser custom track)
Alignm length: 408
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 52

Conread position: 6-428
Cow position: chrX:17251143-17250723 (view UCSC Genome Browser custom track)
Alignm length: 433
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 115

Conread position: 86-428
Cow position: chrX:13085851-13085509 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 221
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 68, 163

Conread position: 131-427
Cow position: chrX:3398531-3398234 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 215
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 26, 47