Cow genome map
| Conread name: | Lng1-LNG010025A06 |
| Conread position: | 593-877 |
| Cow position: | chr10:37415546-37415834 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 207 |
| Alignm E-value: | 8.40779e-45 |
| Alignm gaps (pig, cow): | 130, 97 |
| Conread position: | 548-882 |
| Cow position: | chr11:45646869-45646538 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 241 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 183, 34 |
| Conread position: | 562-877 |
| Cow position: | chr11:52381135-52380821 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 213 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 155, 88 |
| Conread position: | 535-879 |
| Cow position: | chr13:53574218-53573884 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 238 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 5, 73 |
| Conread position: | 320-880 |
| Cow position: | chr14:32371214-32371769 (view UCSC Genome Browser custom track) |
| Alignm length: | 571 |
| Alignm identity: | 393 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 12 |
| Conread position: | 553-877 |
| Cow position: | chr14:35018458-35018779 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 230 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 163, 97 |
| Conread position: | 325-895 |
| Cow position: | chr16:18141807-18141240 (view UCSC Genome Browser custom track) |
| Alignm length: | 585 |
| Alignm identity: | 402 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 372, 105 |
| Conread position: | 329-903 |
| Cow position: | chr16:54578698-54579261 (view UCSC Genome Browser custom track) |
| Alignm length: | 579 |
| Alignm identity: | 418 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 409, 44 |
| Conread position: | 530-903 |
| Cow position: | chr16:47820293-47820662 (view UCSC Genome Browser custom track) |
| Alignm length: | 377 |
| Alignm identity: | 272 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 111, 133 |
| Conread position: | 320-876 |
| Cow position: | chr17:33289098-33288549 (view UCSC Genome Browser custom track) |
| Alignm length: | 558 |
| Alignm identity: | 404 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 526, 39 |
| Conread position: | 347-903 |
| Cow position: | chr18:28101133-28101693 (view UCSC Genome Browser custom track) |
| Alignm length: | 563 |
| Alignm identity: | 417 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 305, 485 |
| Conread position: | 350-903 |
| Cow position: | chr18:4540362-4539821 (view UCSC Genome Browser custom track) |
| Alignm length: | 560 |
| Alignm identity: | 403 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 380, 228 |
| Conread position: | 410-888 |
| Cow position: | chr18:23766850-23766362 (view UCSC Genome Browser custom track) |
| Alignm length: | 493 |
| Alignm identity: | 347 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 132, 78 |
| Conread position: | 549-877 |
| Cow position: | chr19:21363711-21363380 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 234 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 155, 21 |
| Conread position: | 616-877 |
| Cow position: | chr19:25655441-25655170 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 183 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 105, 0 |
| Conread position: | 625-888 |
| Cow position: | chr19:24760078-24759815 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 184 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 90, 8 |
| Conread position: | 320-842 |
| Cow position: | chr2:77467939-77467415 (view UCSC Genome Browser custom track) |
| Alignm length: | 533 |
| Alignm identity: | 377 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 323, 27 |
| Conread position: | 320-875 |
| Cow position: | chr21:42540645-42540092 (view UCSC Genome Browser custom track) |
| Alignm length: | 561 |
| Alignm identity: | 418 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 120 |
| Conread position: | 320-877 |
| Cow position: | chr22:864998-864451 (view UCSC Genome Browser custom track) |
| Alignm length: | 565 |
| Alignm identity: | 405 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 228, 61 |
| Conread position: | 447-888 |
| Cow position: | chr23:40780969-40781412 (view UCSC Genome Browser custom track) |
| Alignm length: | 453 |
| Alignm identity: | 309 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 284, 119 |
| Conread position: | 673-877 |
| Cow position: | chr23:12363755-12363547 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 156 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 48, 104 |
| Conread position: | 320-875 |
| Cow position: | chr24:11886652-11887199 (view UCSC Genome Browser custom track) |
| Alignm length: | 559 |
| Alignm identity: | 405 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 36 |
| Conread position: | 479-888 |
| Cow position: | chr24:15057038-15057451 (view UCSC Genome Browser custom track) |
| Alignm length: | 429 |
| Alignm identity: | 294 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 61, 97 |
| Conread position: | 617-877 |
| Cow position: | chr27:29312522-29312786 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 177 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 113, 80 |
| Conread position: | 378-877 |
| Cow position: | chr28:11527685-11527186 (view UCSC Genome Browser custom track) |
| Alignm length: | 510 |
| Alignm identity: | 350 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 72, 167 |
| Conread position: | 419-877 |
| Cow position: | chr28:6971722-6971275 (view UCSC Genome Browser custom track) |
| Alignm length: | 460 |
| Alignm identity: | 320 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 427, 159 |
| Conread position: | 504-886 |
| Cow position: | chr3:74600792-74601166 (view UCSC Genome Browser custom track) |
| Alignm length: | 389 |
| Alignm identity: | 265 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 12, 26 |
| Conread position: | 600-890 |
| Cow position: | chr3:78092740-78092453 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 208 |
| Alignm E-value: | 5e-39 |
| Alignm gaps (pig, cow): | 187, 10 |
| Conread position: | 320-903 |
| Cow position: | chr4:19096802-19097374 (view UCSC Genome Browser custom track) |
| Alignm length: | 587 |
| Alignm identity: | 438 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 397, 117 |
| Conread position: | 412-903 |
| Cow position: | chr4:68387392-68387879 (view UCSC Genome Browser custom track) |
| Alignm length: | 501 |
| Alignm identity: | 351 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 27 |
| Conread position: | 453-877 |
| Cow position: | chr4:8947036-8947456 (view UCSC Genome Browser custom track) |
| Alignm length: | 439 |
| Alignm identity: | 311 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 94, 176 |
| Conread position: | 496-877 |
| Cow position: | chr4:48961808-48961425 (view UCSC Genome Browser custom track) |
| Alignm length: | 389 |
| Alignm identity: | 278 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 125, 13 |
| Conread position: | 596-879 |
| Cow position: | chr4:59277699-59277417 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 194 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 188, 0 |
| Conread position: | 456-877 |
| Cow position: | chr5:68718564-68718961 (view UCSC Genome Browser custom track) |
| Alignm length: | 422 |
| Alignm identity: | 283 |
| Alignm E-value: | 5.99994e-41 |
| Alignm gaps (pig, cow): | 71, 0 |
| Conread position: | 320-877 |
| Cow position: | chr6:12550820-12551377 (view UCSC Genome Browser custom track) |
| Alignm length: | 560 |
| Alignm identity: | 408 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 407, 258 |
| Conread position: | 319-877 |
| Cow position: | chr7:48666980-48667524 (view UCSC Genome Browser custom track) |
| Alignm length: | 568 |
| Alignm identity: | 409 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 214, 27 |
| Conread position: | 558-816 |
| Cow position: | chr7:44986450-44986702 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 181 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 139, 82 |
| Conread position: | 530-877 |
| Cow position: | chr8:47169688-47170023 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 244 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 313, 48 |
| Conread position: | 558-823 |
| Cow position: | chr8:20683733-20683996 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 192 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 152, 65 |
| Conread position: | 652-871 |
| Cow position: | chr8:37582238-37582024 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 152 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 50, 71 |
| Conread position: | 573-877 |
| Cow position: | chrX:38852988-38853292 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 219 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 160, 81 |