Cow genome map

Conread name: Lng1-LNG010027H04

Conread position: 324-603
Cow position: chr1:21720430-21720713 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 201
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 99, 82

Conread position: 325-740
Cow position: chr1:67287051-67287470 (view UCSC Genome Browser custom track)
Alignm length: 431
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 29

Conread position: 325-754
Cow position: chr1:22842859-22843298 (view UCSC Genome Browser custom track)
Alignm length: 445
Alignm identity: 287
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 77, 241

Conread position: 326-619
Cow position: chr1:61737895-61737605 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 199
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 206, 79

Conread position: 326-741
Cow position: chr1:40512829-40512405 (view UCSC Genome Browser custom track)
Alignm length: 432
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 175

Conread position: 336-754
Cow position: chr1:86698984-86698558 (view UCSC Genome Browser custom track)
Alignm length: 432
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 37

Conread position: 339-745
Cow position: chr1:57366896-57366475 (view UCSC Genome Browser custom track)
Alignm length: 427
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 34

Conread position: 339-754
Cow position: chr1:49973954-49973531 (view UCSC Genome Browser custom track)
Alignm length: 429
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 34

Conread position: 339-754
Cow position: chr1:63605545-63605119 (view UCSC Genome Browser custom track)
Alignm length: 431
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 34

Conread position: 340-555
Cow position: chr1:86610068-86610288 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 155
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 62, 0

Conread position: 340-754
Cow position: chr1:72186640-72186222 (view UCSC Genome Browser custom track)
Alignm length: 429
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 134, 33

Conread position: 343-555
Cow position: chr1:38387111-38386897 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 166
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 128, 90

Conread position: 355-740
Cow position: chr1:30518938-30519339 (view UCSC Genome Browser custom track)
Alignm length: 406
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 91

Conread position: 355-753
Cow position: chr1:55321900-55321485 (view UCSC Genome Browser custom track)
Alignm length: 422
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 227

Conread position: 377-684
Cow position: chr1:23052056-23052378 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 232
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 25, 198

Conread position: 397-665
Cow position: chr1:22344208-22344479 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 196
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 7, 183

Conread position: 401-754
Cow position: chr1:56144039-56143675 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 9

Conread position: 405-645
Cow position: chr1:33712371-33712610 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 189
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 70, 28

Conread position: 405-754
Cow position: chr1:57568255-57568593 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 5

Conread position: 406-751
Cow position: chr1:58883768-58883409 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 356

Conread position: 406-753
Cow position: chr1:102549534-102549890 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 185

Conread position: 406-754
Cow position: chr1:3385721-3385360 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 169

Conread position: 406-754
Cow position: chr1:30534725-30534361 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 0

Conread position: 406-754
Cow position: chr1:48246144-48246489 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 133

Conread position: 406-754
Cow position: chr1:65386627-65386989 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 0

Conread position: 406-754
Cow position: chr1:73070757-73070393 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 0

Conread position: 406-754
Cow position: chr1:79456673-79456313 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 0

Conread position: 406-754
Cow position: chr1:93854820-93855176 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 47

Conread position: 409-754
Cow position: chr1:76545236-76544879 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 46

Conread position: 410-754
Cow position: chr1:76752350-76751989 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 0

Conread position: 411-754
Cow position: chr1:69922132-69921778 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 43

Conread position: 413-754
Cow position: chr1:39544069-39544426 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 261

Conread position: 413-754
Cow position: chr1:95239669-95240025 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 260

Conread position: 415-754
Cow position: chr1:80358877-80358524 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 0

Conread position: 416-746
Cow position: chr1:69766766-69767111 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 0

Conread position: 416-746
Cow position: chr1:86547831-86547490 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 117

Conread position: 416-750
Cow position: chr1:18880089-18879741 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 0

Conread position: 416-750
Cow position: chr1:40053659-40054007 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 0

Conread position: 416-750
Cow position: chr1:53198853-53199203 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 0

Conread position: 416-753
Cow position: chr1:56490154-56490507 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 0

Conread position: 416-754
Cow position: chr1:8554632-8554988 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 82

Conread position: 416-754
Cow position: chr1:20829193-20829546 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 0

Conread position: 416-754
Cow position: chr1:21087717-21088070 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 0

Conread position: 416-754
Cow position: chr1:33851581-33851942 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 0

Conread position: 416-754
Cow position: chr1:40574517-40574870 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 0

Conread position: 416-754
Cow position: chr1:40684387-40684040 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 6

Conread position: 416-754
Cow position: chr1:57424535-57424184 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 0

Conread position: 416-754
Cow position: chr1:67834837-67834484 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 6

Conread position: 416-754
Cow position: chr1:71562270-71561916 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 83

Conread position: 416-754
Cow position: chr1:82564807-82565160 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 0

Conread position: 416-754
Cow position: chr1:82652957-82653322 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 0

Conread position: 417-746
Cow position: chr1:29034607-29034943 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 119, 60

Conread position: 419-746
Cow position: chr1:69403292-69403635 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 0

Conread position: 419-751
Cow position: chr1:52358965-52358619 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 343

Conread position: 419-754
Cow position: chr1:11291798-11291451 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 212

Conread position: 419-754
Cow position: chr1:28873386-28873737 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 37

Conread position: 419-754
Cow position: chr1:85882314-85882656 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 23

Conread position: 420-746
Cow position: chr1:79636619-79636315 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 236
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 116, 135

Conread position: 423-753
Cow position: chr1:94659999-94660331 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 113

Conread position: 423-754
Cow position: chr1:42736769-42737115 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 39

Conread position: 423-754
Cow position: chr1:99913734-99914080 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 39

Conread position: 423-754
Cow position: chr1:102434722-102434381 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 295

Conread position: 431-754
Cow position: chr1:31418190-31417857 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 10

Conread position: 437-750
Cow position: chr1:85792012-85792334 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 116

Conread position: 437-754
Cow position: chr1:89425899-89426230 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 0

Conread position: 447-754
Cow position: chr1:31397026-31397349 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 0

Conread position: 448-754
Cow position: chr1:31365746-31365430 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 159

Conread position: 448-754
Cow position: chr1:66999363-66999672 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 159

Conread position: 453-745
Cow position: chr1:43571060-43570757 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 225
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 22, 44

Conread position: 456-754
Cow position: chr1:57657154-57657455 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 24

Conread position: 458-754
Cow position: chr1:59209799-59209494 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 14

Conread position: 463-754
Cow position: chr1:56163907-56164206 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 12

Conread position: 475-754
Cow position: chr1:56723522-56723815 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 144

Conread position: 479-750
Cow position: chr1:91751091-91750810 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 0

Conread position: 496-754
Cow position: chr1:11860846-11860582 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 0

Conread position: 521-754
Cow position: chr1:55777000-55777241 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 191
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 0

Conread position: 549-754
Cow position: chr1:6194684-6194891 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 171
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 162

Conread position: 549-754
Cow position: chr1:44044227-44044439 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 168
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 87, 0

Conread position: 554-754
Cow position: chr1:9258946-9259153 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 164
Alignm E-value: 8.00141e-43
Alignm gaps (pig, cow): 87, 0

Conread position: 562-754
Cow position: chr1:1460726-1460546 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 151
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 70, 138

Conread position: 576-754
Cow position: chr1:76621211-76621025 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 145
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 60, 0

Conread position: 578-754
Cow position: chr1:33896216-33896399 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 149
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 58, 0

Conread position: 589-754
Cow position: chr1:24443835-24443665 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 136
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 45, 0

Conread position: 590-746
Cow position: chr1:77117081-77116923 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 129
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 46, 127

Conread position: 321-559
Cow position: chr10:20370985-20370750 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 166
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 67, 44

Conread position: 321-754
Cow position: chr10:26596845-26597298 (view UCSC Genome Browser custom track)
Alignm length: 458
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 34

Conread position: 323-750
Cow position: chr10:11820996-11821448 (view UCSC Genome Browser custom track)
Alignm length: 456
Alignm identity: 310
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 46, 66

Conread position: 325-754
Cow position: chr10:38545658-38545233 (view UCSC Genome Browser custom track)
Alignm length: 435
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 114, 170

Conread position: 330-632
Cow position: chr10:38847954-38848268 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 222
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 36, 285

Conread position: 331-555
Cow position: chr10:42110580-42110811 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 166
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 54, 27

Conread position: 335-754
Cow position: chr10:22101486-22101918 (view UCSC Genome Browser custom track)
Alignm length: 436
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 76

Conread position: 336-623
Cow position: chr10:15860650-15860371 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 207
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 66, 89

Conread position: 336-754
Cow position: chr10:8327040-8326613 (view UCSC Genome Browser custom track)
Alignm length: 432
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 26

Conread position: 347-659
Cow position: chr10:14861516-14861839 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 65

Conread position: 350-658
Cow position: chr10:28931126-28930805 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 225
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 52, 36

Conread position: 351-723
Cow position: chr10:21900514-21900133 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 24

Conread position: 354-746
Cow position: chr10:31524377-31524773 (view UCSC Genome Browser custom track)
Alignm length: 408
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 40

Conread position: 406-745
Cow position: chr10:62408528-62408173 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 0

Conread position: 406-746
Cow position: chr10:21487238-21487593 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 0

Conread position: 406-754
Cow position: chr10:19511929-19512290 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 0

Conread position: 409-754
Cow position: chr10:7281768-7281408 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 38

Conread position: 416-753
Cow position: chr10:14804163-14804513 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 106

Conread position: 416-754
Cow position: chr10:280294-279928 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 6

Conread position: 416-754
Cow position: chr10:5849299-5848947 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 0

Conread position: 416-754
Cow position: chr10:11698571-11698923 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 6

Conread position: 416-754
Cow position: chr10:19495959-19495599 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 0

Conread position: 416-754
Cow position: chr10:21400344-21399991 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 0

Conread position: 416-754
Cow position: chr10:41157774-41158127 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 0

Conread position: 416-754
Cow position: chr10:41567429-41567782 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 82

Conread position: 416-754
Cow position: chr10:41877245-41877600 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 82

Conread position: 416-754
Cow position: chr10:55093592-55093946 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 0

Conread position: 416-754
Cow position: chr10:56065000-56065353 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 0

Conread position: 420-754
Cow position: chr10:38538166-38537817 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 36

Conread position: 423-754
Cow position: chr10:8290319-8290658 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 39

Conread position: 423-754
Cow position: chr10:16925876-16926217 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 18

Conread position: 436-754
Cow position: chr10:2120657-2120331 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 17

Conread position: 437-754
Cow position: chr10:28641888-28642213 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 228

Conread position: 447-754
Cow position: chr10:51952263-51951946 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 0

Conread position: 462-754
Cow position: chr10:19715187-19714885 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 96

Conread position: 474-743
Cow position: chr10:39779630-39779903 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 239

Conread position: 474-754
Cow position: chr10:40151850-40151566 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 19

Conread position: 474-754
Cow position: chr10:47907320-47907610 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 0

Conread position: 485-754
Cow position: chr10:14335440-14335169 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 201

Conread position: 561-746
Cow position: chr10:124872-125064 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 159
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 0

Conread position: 564-750
Cow position: chr10:61927713-61927522 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 136
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 72, 108

Conread position: 569-746
Cow position: chr10:5675-5859 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 145
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 67, 0

Conread position: 569-751
Cow position: chr10:8340367-8340554 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 149
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 67, 22

Conread position: 611-754
Cow position: chr10:49990971-49991121 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 118
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 25, 0

Conread position: 320-754
Cow position: chr11:10090549-10091000 (view UCSC Genome Browser custom track)
Alignm length: 456
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 41

Conread position: 326-565
Cow position: chr11:9220075-9219839 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 172
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 81, 28

Conread position: 333-754
Cow position: chr11:58134276-58134712 (view UCSC Genome Browser custom track)
Alignm length: 440
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 34

Conread position: 351-754
Cow position: chr11:31926078-31926490 (view UCSC Genome Browser custom track)
Alignm length: 421
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 63

Conread position: 362-561
Cow position: chr11:8261634-8261423 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 153
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 33, 0

Conread position: 370-740
Cow position: chr11:62229129-62229492 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 77

Conread position: 388-754
Cow position: chr11:29668670-29668291 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 52

Conread position: 390-754
Cow position: chr11:28229818-28229440 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 282

Conread position: 395-668
Cow position: chr11:33978263-33977974 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 208
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 76, 12

Conread position: 400-754
Cow position: chr11:84389584-84389949 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 313

Conread position: 402-558
Cow position: chr11:30125286-30125124 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 121
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 72, 0

Conread position: 403-746
Cow position: chr11:31874815-31874460 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 20

Conread position: 405-754
Cow position: chr11:24393282-24393640 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 29

Conread position: 405-754
Cow position: chr11:76374240-76373898 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 30

Conread position: 406-740
Cow position: chr11:41170731-41170382 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 57

Conread position: 406-754
Cow position: chr11:10847403-10847768 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 0

Conread position: 406-754
Cow position: chr11:38835470-38835109 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 0

Conread position: 406-754
Cow position: chr11:44157292-44156928 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 50

Conread position: 406-754
Cow position: chr11:44251760-44252117 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 87

Conread position: 406-754
Cow position: chr11:85393850-85393487 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 164

Conread position: 412-746
Cow position: chr11:43514665-43514320 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 32

Conread position: 413-753
Cow position: chr11:5343256-5342900 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 0

Conread position: 416-746
Cow position: chr11:9734698-9734351 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 0

Conread position: 416-750
Cow position: chr11:67846606-67846257 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 0

Conread position: 416-754
Cow position: chr11:3492976-3493315 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 6

Conread position: 416-754
Cow position: chr11:15983589-15983943 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 0

Conread position: 416-754
Cow position: chr11:19064284-19063932 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 250

Conread position: 416-754
Cow position: chr11:28108115-28108468 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 6

Conread position: 416-754
Cow position: chr11:33194588-33194237 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 172

Conread position: 416-754
Cow position: chr11:36744215-36743863 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 82

Conread position: 416-754
Cow position: chr11:52419353-52419714 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 256
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 22, 304

Conread position: 416-754
Cow position: chr11:61401086-61400742 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 234

Conread position: 416-754
Cow position: chr11:64045963-64046316 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 0

Conread position: 416-754
Cow position: chr11:73477273-73477626 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 0

Conread position: 418-754
Cow position: chr11:46246589-46246231 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 250

Conread position: 419-744
Cow position: chr11:9157180-9156845 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 210

Conread position: 419-754
Cow position: chr11:4027589-4027242 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 143

Conread position: 419-754
Cow position: chr11:28054625-28054291 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 75

Conread position: 420-754
Cow position: chr11:12358448-12358099 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 35

Conread position: 422-753
Cow position: chr11:9606603-9606260 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 147

Conread position: 423-753
Cow position: chr11:53432087-53431742 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 0

Conread position: 426-750
Cow position: chr11:22934784-22935110 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 110, 56

Conread position: 426-754
Cow position: chr11:26124949-26124609 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 295

Conread position: 437-754
Cow position: chr11:57628059-57627720 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 76

Conread position: 449-754
Cow position: chr11:17107687-17107369 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 166

Conread position: 474-750
Cow position: chr11:20734214-20733928 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 0

Conread position: 474-754
Cow position: chr11:64082055-64081765 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 0

Conread position: 479-746
Cow position: chr11:7116253-7116528 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 53

Conread position: 479-754
Cow position: chr11:40775961-40775678 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 111

Conread position: 483-754
Cow position: chr11:63655300-63655019 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 0

Conread position: 509-754
Cow position: chr11:71329658-71329910 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 0

Conread position: 532-754
Cow position: chr11:53287077-53286847 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 178
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 23, 0

Conread position: 549-745
Cow position: chr11:45922505-45922312 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 144
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 164, 70

Conread position: 557-745
Cow position: chr11:10051837-10052031 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 147
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 79, 118

Conread position: 561-754
Cow position: chr11:44492152-44491954 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 155
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 70, 93

Conread position: 577-754
Cow position: chr11:17546301-17546485 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 142
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 59, 0

Conread position: 640-750
Cow position: chr11:37476798-37476684 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 97
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 72, 0

Conread position: 335-751
Cow position: chr12:21198141-21198566 (view UCSC Genome Browser custom track)
Alignm length: 434
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 38

Conread position: 396-754
Cow position: chr12:8197449-8197821 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 0

Conread position: 406-754
Cow position: chr12:6406403-6406039 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 0

Conread position: 406-754
Cow position: chr12:42859579-42859217 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 280

Conread position: 408-740
Cow position: chr12:21226716-21226376 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 219
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 9, 36

Conread position: 416-749
Cow position: chr12:37558808-37559150 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 145

Conread position: 416-754
Cow position: chr12:4157629-4157982 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 0

Conread position: 416-754
Cow position: chr12:32653796-32654148 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 256

Conread position: 416-754
Cow position: chr12:43031133-43030782 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 105

Conread position: 420-754
Cow position: chr12:14662369-14662025 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 299

Conread position: 423-754
Cow position: chr12:27932679-27932322 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 114

Conread position: 427-754
Cow position: chr12:27855690-27855355 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 29

Conread position: 470-754
Cow position: chr12:8677771-8677495 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 134

Conread position: 479-754
Cow position: chr12:21371002-21371279 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 191
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 58, 110

Conread position: 593-745
Cow position: chr12:25263030-25262871 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 124
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 43, 0

Conread position: 600-754
Cow position: chr12:1889067-1888906 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 123
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 36, 0

Conread position: 331-731
Cow position: chr13:22185290-22184878 (view UCSC Genome Browser custom track)
Alignm length: 417
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 124

Conread position: 332-723
Cow position: chr13:26844057-26844441 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 139, 83

Conread position: 338-734
Cow position: chr13:31556751-31556353 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 23

Conread position: 339-744
Cow position: chr13:1593191-1592776 (view UCSC Genome Browser custom track)
Alignm length: 421
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 34

Conread position: 339-750
Cow position: chr13:34937446-34937863 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 304

Conread position: 342-754
Cow position: chr13:4483761-4484185 (view UCSC Genome Browser custom track)
Alignm length: 431
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 31

Conread position: 362-753
Cow position: chr13:6668136-6667730 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 60

Conread position: 387-754
Cow position: chr13:15520489-15520121 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 54

Conread position: 395-724
Cow position: chr13:11064153-11063817 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 240
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 34, 24

Conread position: 406-746
Cow position: chr13:9044527-9044883 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 50

Conread position: 406-746
Cow position: chr13:23003282-23002926 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 0

Conread position: 406-754
Cow position: chr13:3654297-3653934 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 57

Conread position: 406-754
Cow position: chr13:15924357-15923993 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 0

Conread position: 406-754
Cow position: chr13:34868769-34869131 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 0

Conread position: 408-754
Cow position: chr13:27922197-27921846 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 248
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 67, 44

Conread position: 416-753
Cow position: chr13:13324780-13325132 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 0

Conread position: 416-753
Cow position: chr13:30244647-30244295 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 0

Conread position: 416-754
Cow position: chr13:3058079-3057726 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 191

Conread position: 416-754
Cow position: chr13:31734054-31733701 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 261

Conread position: 416-754
Cow position: chr13:47229970-47229617 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 82

Conread position: 416-754
Cow position: chr13:49973715-49974068 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 78

Conread position: 416-754
Cow position: chr13:60466368-60466717 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 102

Conread position: 418-750
Cow position: chr13:50109495-50109840 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 0

Conread position: 419-746
Cow position: chr13:34042329-34041991 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 297

Conread position: 420-751
Cow position: chr13:30303319-30303665 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 343

Conread position: 422-753
Cow position: chr13:35030592-35030923 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 117

Conread position: 423-754
Cow position: chr13:32737777-32737438 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 30

Conread position: 423-754
Cow position: chr13:33336374-33336040 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 134

Conread position: 437-754
Cow position: chr13:17308528-17308854 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 0

Conread position: 447-754
Cow position: chr13:2388755-2388427 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 0

Conread position: 474-751
Cow position: chr13:30656879-30656595 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 281

Conread position: 474-754
Cow position: chr13:41315953-41316243 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 0

Conread position: 479-750
Cow position: chr13:21840099-21839818 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 0

Conread position: 479-754
Cow position: chr13:58118808-58118524 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 14

Conread position: 485-754
Cow position: chr13:15450999-15450725 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 8

Conread position: 485-754
Cow position: chr13:31612197-31611917 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 0

Conread position: 485-754
Cow position: chr13:32545488-32545767 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 0

Conread position: 487-754
Cow position: chr13:676970-677259 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 0

Conread position: 518-754
Cow position: chr13:13900010-13900255 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 143

Conread position: 570-746
Cow position: chr13:18331607-18331790 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 152
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 64, 0

Conread position: 600-754
Cow position: chr13:12063726-12063565 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 128
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 36, 0

Conread position: 286-753
Cow position: chr14:45303168-45302713 (view UCSC Genome Browser custom track)
Alignm length: 475
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 152, 237

Conread position: 314-753
Cow position: chr14:44377626-44378064 (view UCSC Genome Browser custom track)
Alignm length: 455
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 50

Conread position: 323-664
Cow position: chr14:33341950-33342305 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 123

Conread position: 323-745
Cow position: chr14:46513361-46513787 (view UCSC Genome Browser custom track)
Alignm length: 435
Alignm identity: 284
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 26, 43

Conread position: 324-665
Cow position: chr14:37457588-37457234 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 100

Conread position: 325-753
Cow position: chr14:44257161-44256701 (view UCSC Genome Browser custom track)
Alignm length: 462
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 122

Conread position: 331-746
Cow position: chr14:37223733-37224158 (view UCSC Genome Browser custom track)
Alignm length: 432
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 42

Conread position: 339-746
Cow position: chr14:45160937-45161356 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 34

Conread position: 339-754
Cow position: chr14:50110406-50110834 (view UCSC Genome Browser custom track)
Alignm length: 434
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 34

Conread position: 348-710
Cow position: chr14:47922953-47923325 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 220

Conread position: 362-679
Cow position: chr14:35423487-35423806 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 223
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 40, 82

Conread position: 380-754
Cow position: chr14:22031541-22031148 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 29

Conread position: 406-746
Cow position: chr14:12743165-12742813 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 36

Conread position: 406-746
Cow position: chr14:20782359-20782714 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 293

Conread position: 406-751
Cow position: chr14:44287347-44286987 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 357

Conread position: 406-754
Cow position: chr14:11154263-11153902 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 0

Conread position: 406-754
Cow position: chr14:13778858-13779219 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 191

Conread position: 406-754
Cow position: chr14:13864179-13863821 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 132

Conread position: 406-754
Cow position: chr14:17685299-17685662 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 357

Conread position: 406-754
Cow position: chr14:48254402-48254039 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 0

Conread position: 416-671
Cow position: chr14:45834061-45834324 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 79

Conread position: 416-754
Cow position: chr14:17491549-17491196 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 154

Conread position: 416-754
Cow position: chr14:23257266-23257619 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 0

Conread position: 416-754
Cow position: chr14:45672138-45671787 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 191

Conread position: 419-754
Cow position: chr14:44685959-44686310 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 0

Conread position: 423-754
Cow position: chr14:19328347-19328008 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 42

Conread position: 447-749
Cow position: chr14:33393840-33393523 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 77

Conread position: 447-753
Cow position: chr14:45029184-45028872 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 6

Conread position: 447-754
Cow position: chr14:2284278-2284598 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 136

Conread position: 470-754
Cow position: chr14:45206283-45206583 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 0

Conread position: 474-753
Cow position: chr14:50138569-50138852 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 200

Conread position: 476-754
Cow position: chr14:9045538-9045827 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 0

Conread position: 543-754
Cow position: chr14:32446841-32447056 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 175
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 0

Conread position: 554-754
Cow position: chr14:15276173-15275968 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 162
Alignm E-value: 8.99999e-40
Alignm gaps (pig, cow): 80, 44

Conread position: 583-754
Cow position: chr14:4862955-4862777 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 139
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 53, 0

Conread position: 590-754
Cow position: chr14:27977448-27977619 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 135
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 42, 0

Conread position: 600-754
Cow position: chr14:23901388-23901549 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 128
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 36, 0

Conread position: 609-754
Cow position: chr14:190074-190227 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 120
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 7, 0

Conread position: 640-754
Cow position: chr14:12899247-12899362 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 97
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 72, 0

Conread position: 645-746
Cow position: chr14:46392373-46392268 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 89
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 64, 0

Conread position: 645-754
Cow position: chr14:16344001-16343889 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 95
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 67, 50

Conread position: 650-754
Cow position: chr14:16919557-16919454 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 87
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 58, 0

Conread position: 322-619
Cow position: chr15:36642754-36643059 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 53

Conread position: 323-734
Cow position: chr15:24794188-24794595 (view UCSC Genome Browser custom track)
Alignm length: 423
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 213, 85

Conread position: 325-752
Cow position: chr15:20357073-20356653 (view UCSC Genome Browser custom track)
Alignm length: 436
Alignm identity: 288
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 28, 38

Conread position: 325-753
Cow position: chr15:21449524-21449950 (view UCSC Genome Browser custom track)
Alignm length: 442
Alignm identity: 299
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 77, 55

Conread position: 330-754
Cow position: chr15:7544713-7545145 (view UCSC Genome Browser custom track)
Alignm length: 442
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 44

Conread position: 339-754
Cow position: chr15:2076489-2076912 (view UCSC Genome Browser custom track)
Alignm length: 428
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 61

Conread position: 339-754
Cow position: chr15:12421324-12420898 (view UCSC Genome Browser custom track)
Alignm length: 433
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 34

Conread position: 339-754
Cow position: chr15:24294933-24295362 (view UCSC Genome Browser custom track)
Alignm length: 434
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 34

Conread position: 340-740
Cow position: chr15:21950276-21949880 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 275
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 111, 22

Conread position: 351-754
Cow position: chr15:40105719-40106126 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 190

Conread position: 362-754
Cow position: chr15:35735431-35735838 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 139

Conread position: 392-754
Cow position: chr15:30810893-30811254 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 11

Conread position: 399-746
Cow position: chr15:8750327-8750681 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 20

Conread position: 399-746
Cow position: chr15:32673650-32673297 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 99

Conread position: 400-754
Cow position: chr15:10888517-10888880 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 139

Conread position: 405-746
Cow position: chr15:44069831-44070179 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 128, 29

Conread position: 406-750
Cow position: chr15:19738149-19737793 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 353

Conread position: 406-751
Cow position: chr15:18332924-18332569 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 294

Conread position: 406-754
Cow position: chr15:4922055-4922418 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 0

Conread position: 406-754
Cow position: chr15:6156049-6155681 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 0

Conread position: 406-754
Cow position: chr15:8099392-8099743 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 158

Conread position: 406-754
Cow position: chr15:15347215-15346852 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 0

Conread position: 406-754
Cow position: chr15:31358790-31359149 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 314

Conread position: 406-754
Cow position: chr15:32494482-32494122 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 413-754
Cow position: chr15:4142913-4142556 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 0

Conread position: 414-746
Cow position: chr15:44828705-44829054 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 0

Conread position: 416-754
Cow position: chr15:444517-444867 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 6

Conread position: 416-754
Cow position: chr15:1772407-1772760 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 0

Conread position: 416-754
Cow position: chr15:1882597-1882244 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 0

Conread position: 416-754
Cow position: chr15:18268078-18267725 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 0

Conread position: 416-754
Cow position: chr15:28490232-28489886 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 280

Conread position: 416-754
Cow position: chr15:36970833-36971179 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 163

Conread position: 416-754
Cow position: chr15:50124033-50123680 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 0

Conread position: 416-754
Cow position: chr15:50146987-50147329 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 186

Conread position: 419-750
Cow position: chr15:4671348-4671696 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 0

Conread position: 419-753
Cow position: chr15:315942-315594 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 215

Conread position: 419-754
Cow position: chr15:18576631-18576978 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 159

Conread position: 419-754
Cow position: chr15:42936631-42936976 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 37

Conread position: 423-754
Cow position: chr15:21665824-21665483 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 296

Conread position: 424-746
Cow position: chr15:7837169-7837503 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 21

Conread position: 437-754
Cow position: chr15:1519219-1518888 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 0

Conread position: 437-754
Cow position: chr15:3009920-3009590 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 59

Conread position: 437-754
Cow position: chr15:4196394-4196724 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 17

Conread position: 437-754
Cow position: chr15:17080271-17079941 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 60

Conread position: 449-676
Cow position: chr15:43618373-43618597 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 162
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 37, 89

Conread position: 450-738
Cow position: chr15:36626345-36626044 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 280

Conread position: 474-745
Cow position: chr15:5980334-5980617 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 19

Conread position: 475-753
Cow position: chr15:14582372-14582094 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 38

Conread position: 479-754
Cow position: chr15:3261351-3261067 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 218

Conread position: 479-754
Cow position: chr15:4812585-4812862 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 174

Conread position: 481-753
Cow position: chr15:32720758-32720474 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 0

Conread position: 532-754
Cow position: chr15:789540-789310 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 179
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 0

Conread position: 532-754
Cow position: chr15:38980702-38980932 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 181
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 0

Conread position: 580-749
Cow position: chr15:4678387-4678562 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 136
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 56, 0

Conread position: 591-754
Cow position: chr15:1782315-1782485 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 128
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 45, 0

Conread position: 631-744
Cow position: chr15:31862418-31862301 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 97
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 81, 0

Conread position: 325-744
Cow position: chr16:25257412-25257846 (view UCSC Genome Browser custom track)
Alignm length: 436
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 90

Conread position: 337-710
Cow position: chr16:25156393-25156005 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 24

Conread position: 337-754
Cow position: chr16:16272114-16271691 (view UCSC Genome Browser custom track)
Alignm length: 435
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 20

Conread position: 338-754
Cow position: chr16:49235332-49234911 (view UCSC Genome Browser custom track)
Alignm length: 431
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 147, 37

Conread position: 339-753
Cow position: chr16:2411475-2411048 (view UCSC Genome Browser custom track)
Alignm length: 432
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 34

Conread position: 341-745
Cow position: chr16:29983340-29983752 (view UCSC Genome Browser custom track)
Alignm length: 421
Alignm identity: 264
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 64, 19

Conread position: 353-745
Cow position: chr16:42739594-42739197 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 185

Conread position: 354-754
Cow position: chr16:29033553-29033973 (view UCSC Genome Browser custom track)
Alignm length: 429
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 11

Conread position: 386-754
Cow position: chr16:836584-836962 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 25

Conread position: 386-754
Cow position: chr16:14666274-14665892 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 84

Conread position: 392-746
Cow position: chr16:25085186-25085531 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 212

Conread position: 397-754
Cow position: chr16:31592352-31591993 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 139, 19

Conread position: 405-754
Cow position: chr16:10437797-10438156 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 262

Conread position: 406-746
Cow position: chr16:407474-407122 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 0

Conread position: 406-746
Cow position: chr16:1567897-1567541 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 0

Conread position: 406-750
Cow position: chr16:2727731-2727372 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 356

Conread position: 406-753
Cow position: chr16:26663306-26663669 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 0

Conread position: 406-754
Cow position: chr16:5483880-5484240 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 36

Conread position: 406-754
Cow position: chr16:8816547-8816185 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 48

Conread position: 406-754
Cow position: chr16:12538368-12538005 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 0

Conread position: 406-754
Cow position: chr16:28471545-28471182 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 119

Conread position: 406-754
Cow position: chr16:29046579-29046942 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 214

Conread position: 406-754
Cow position: chr16:43897714-43897352 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 214

Conread position: 416-753
Cow position: chr16:53045915-53046267 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 0

Conread position: 416-754
Cow position: chr16:5661411-5661763 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 0

Conread position: 416-754
Cow position: chr16:28170802-28170452 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 105

Conread position: 416-754
Cow position: chr16:31832193-31832546 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 191

Conread position: 419-740
Cow position: chr16:2483572-2483234 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 98

Conread position: 419-754
Cow position: chr16:15566312-15566662 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 0

Conread position: 423-754
Cow position: chr16:23252932-23252589 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 32

Conread position: 423-754
Cow position: chr16:25341541-25341878 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 32

Conread position: 429-746
Cow position: chr16:9930515-9930846 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 240
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 21, 256

Conread position: 437-754
Cow position: chr16:4302748-4302420 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 167

Conread position: 437-754
Cow position: chr16:10375995-10375679 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 190

Conread position: 437-754
Cow position: chr16:41163476-41163149 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 288

Conread position: 496-753
Cow position: chr16:15492881-15493149 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 0

Conread position: 523-754
Cow position: chr16:28197998-28197758 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 188
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 0

Conread position: 550-745
Cow position: chr16:12670172-12669978 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 141
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 86, 135

Conread position: 550-754
Cow position: chr16:6943312-6943523 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 163
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 86, 0

Conread position: 561-754
Cow position: chr16:1431906-1432110 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 162
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 75, 0

Conread position: 573-754
Cow position: chr16:37456293-37456106 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 141
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 51, 0

Conread position: 575-754
Cow position: chr16:17057512-17057334 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 132
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 49, 84

Conread position: 633-754
Cow position: chr16:28377012-28377137 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 102
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 82, 0

Conread position: 640-754
Cow position: chr16:11283111-11283229 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 97
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 75, 0

Conread position: 331-754
Cow position: chr17:14894217-14894652 (view UCSC Genome Browser custom track)
Alignm length: 440
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 42

Conread position: 339-754
Cow position: chr17:6259916-6260341 (view UCSC Genome Browser custom track)
Alignm length: 432
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 34

Conread position: 345-754
Cow position: chr17:15156900-15156474 (view UCSC Genome Browser custom track)
Alignm length: 427
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 0

Conread position: 354-754
Cow position: chr17:6119800-6120203 (view UCSC Genome Browser custom track)
Alignm length: 416
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 47

Conread position: 405-754
Cow position: chr17:15850536-15850896 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 5

Conread position: 405-754
Cow position: chr17:40804956-40805308 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 30

Conread position: 406-754
Cow position: chr17:6068697-6069048 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 130, 47

Conread position: 406-754
Cow position: chr17:18103550-18103196 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 39

Conread position: 413-754
Cow position: chr17:1382679-1382327 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 286

Conread position: 416-750
Cow position: chr17:8209245-8209595 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 82

Conread position: 416-754
Cow position: chr17:14216887-14216541 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 223

Conread position: 416-754
Cow position: chr17:20665587-20665233 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 0

Conread position: 416-754
Cow position: chr17:23324315-23323962 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 0

Conread position: 419-750
Cow position: chr17:22132376-22132724 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 0

Conread position: 419-754
Cow position: chr17:4060247-4060597 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 37

Conread position: 419-754
Cow position: chr17:24029852-24029511 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 191

Conread position: 437-750
Cow position: chr17:2262263-2262591 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 0

Conread position: 437-754
Cow position: chr17:34156289-34156620 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 0

Conread position: 447-754
Cow position: chr17:15435962-15436283 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 0

Conread position: 447-754
Cow position: chr17:31767868-31767547 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 0

Conread position: 471-752
Cow position: chr17:151672-151382 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 22

Conread position: 473-754
Cow position: chr17:11376583-11376292 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 0

Conread position: 476-754
Cow position: chr17:228104-227816 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 0

Conread position: 535-754
Cow position: chr17:43988767-43988992 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 138
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 101, 63

Conread position: 563-754
Cow position: chr17:9081146-9080948 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 154
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 73, 0

Conread position: 583-754
Cow position: chr17:11783164-11783339 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 101
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 132, 0

Conread position: 339-754
Cow position: chr18:28973623-28973183 (view UCSC Genome Browser custom track)
Alignm length: 445
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 61

Conread position: 351-754
Cow position: chr18:29765250-29765679 (view UCSC Genome Browser custom track)
Alignm length: 430
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 0

Conread position: 375-754
Cow position: chr18:33750330-33750716 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 35

Conread position: 406-750
Cow position: chr18:32652545-32652913 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 108

Conread position: 406-754
Cow position: chr18:14416318-14416685 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 0

Conread position: 406-754
Cow position: chr18:16176275-16175916 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 314

Conread position: 406-754
Cow position: chr18:23797990-23798348 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 49

Conread position: 406-754
Cow position: chr18:52651262-52651617 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 293

Conread position: 411-754
Cow position: chr18:27987413-27987772 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 43

Conread position: 416-754
Cow position: chr18:11274759-11274406 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 0

Conread position: 416-754
Cow position: chr18:22602834-22603185 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 191

Conread position: 416-754
Cow position: chr18:33953228-33952877 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 157

Conread position: 416-754
Cow position: chr18:51342033-51342386 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 0

Conread position: 416-754
Cow position: chr18:55088576-55088220 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 81

Conread position: 419-753
Cow position: chr18:40478740-40479088 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 35

Conread position: 419-753
Cow position: chr18:41840469-41840109 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 0

Conread position: 420-754
Cow position: chr18:37505422-37505764 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 25

Conread position: 427-754
Cow position: chr18:27837952-27837612 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 0

Conread position: 428-754
Cow position: chr18:16088511-16088847 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 291

Conread position: 437-754
Cow position: chr18:19352751-19353071 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 98

Conread position: 447-754
Cow position: chr18:24040353-24040025 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 0

Conread position: 449-750
Cow position: chr18:23126909-23126595 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 205
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 50, 0

Conread position: 474-754
Cow position: chr18:51660757-51661045 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 0

Conread position: 518-754
Cow position: chr18:16079133-16079371 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 181
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 37, 56

Conread position: 315-739
Cow position: chr19:39669251-39668819 (view UCSC Genome Browser custom track)
Alignm length: 439
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 43

Conread position: 321-754
Cow position: chr19:3138192-3138646 (view UCSC Genome Browser custom track)
Alignm length: 459
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 141

Conread position: 323-745
Cow position: chr19:674975-674545 (view UCSC Genome Browser custom track)
Alignm length: 443
Alignm identity: 284
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 39, 52

Conread position: 324-702
Cow position: chr19:352382-351999 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 261
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 49, 41

Conread position: 325-754
Cow position: chr19:27052241-27051810 (view UCSC Genome Browser custom track)
Alignm length: 441
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 137, 29

Conread position: 333-754
Cow position: chr19:33873704-33874130 (view UCSC Genome Browser custom track)
Alignm length: 434
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 67

Conread position: 351-746
Cow position: chr19:162811-162410 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 11

Conread position: 354-520
Cow position: chr19:35377454-35377629 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 132
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 48, 21

Conread position: 390-754
Cow position: chr19:772920-773299 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 243

Conread position: 391-740
Cow position: chr19:2274056-2273688 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 0

Conread position: 396-754
Cow position: chr19:893268-892898 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 25

Conread position: 406-746
Cow position: chr19:5729176-5729532 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 0

Conread position: 406-754
Cow position: chr19:33941957-33942309 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 88

Conread position: 406-754
Cow position: chr19:39185199-39184834 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 0

Conread position: 406-754
Cow position: chr19:39390855-39391215 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 234

Conread position: 415-754
Cow position: chr19:204312-204664 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 0

Conread position: 416-754
Cow position: chr19:52151479-52151126 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 0

Conread position: 419-754
Cow position: chr19:28581301-28580954 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 289

Conread position: 420-754
Cow position: chr19:172573-172913 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 27

Conread position: 437-754
Cow position: chr19:7342444-7342771 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 0

Conread position: 437-754
Cow position: chr19:28593637-28593966 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 0

Conread position: 447-754
Cow position: chr19:43144099-43144417 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 0

Conread position: 449-745
Cow position: chr19:35385356-35385053 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 202
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 84, 134

Conread position: 475-754
Cow position: chr19:168185-167896 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 0

Conread position: 496-754
Cow position: chr19:5901058-5900790 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 0

Conread position: 542-745
Cow position: chr19:12773604-12773813 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 175
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 69

Conread position: 604-754
Cow position: chr19:28406155-28406002 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 122
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 37, 59

Conread position: 640-754
Cow position: chr19:38794-38912 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 101
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 14, 58

Conread position: 315-731
Cow position: chr2:11692262-11692666 (view UCSC Genome Browser custom track)
Alignm length: 420
Alignm identity: 274
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 38, 47

Conread position: 316-703
Cow position: chr2:5963386-5962984 (view UCSC Genome Browser custom track)
Alignm length: 406
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 50

Conread position: 323-596
Cow position: chr2:1362870-1363147 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 39

Conread position: 325-632
Cow position: chr2:7902732-7903038 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 31

Conread position: 338-751
Cow position: chr2:199064-198643 (view UCSC Genome Browser custom track)
Alignm length: 431
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 137, 30

Conread position: 339-754
Cow position: chr2:24146585-24147012 (view UCSC Genome Browser custom track)
Alignm length: 432
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 109, 34

Conread position: 339-754
Cow position: chr2:36980101-36980527 (view UCSC Genome Browser custom track)
Alignm length: 433
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 34

Conread position: 344-754
Cow position: chr2:20902800-20902406 (view UCSC Genome Browser custom track)
Alignm length: 415
Alignm identity: 283
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 209, 58

Conread position: 348-746
Cow position: chr2:42333123-42332726 (view UCSC Genome Browser custom track)
Alignm length: 413
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 13

Conread position: 351-746
Cow position: chr2:34564874-34564478 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 281
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 49, 29

Conread position: 351-753
Cow position: chr2:28643082-28642674 (view UCSC Genome Browser custom track)
Alignm length: 419
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 23

Conread position: 351-754
Cow position: chr2:36030600-36030212 (view UCSC Genome Browser custom track)
Alignm length: 413
Alignm identity: 287
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 124, 67

Conread position: 362-705
Cow position: chr2:20920695-20920358 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 237
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 40, 177

Conread position: 365-746
Cow position: chr2:11729619-11730001 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 20

Conread position: 365-754
Cow position: chr2:41686254-41686655 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 61

Conread position: 386-754
Cow position: chr2:47603477-47603100 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 19

Conread position: 398-746
Cow position: chr2:53329537-53329899 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 7

Conread position: 401-754
Cow position: chr2:10268871-10268513 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 34

Conread position: 405-754
Cow position: chr2:28793044-28793400 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 5

Conread position: 406-745
Cow position: chr2:52062456-52062807 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 169

Conread position: 406-754
Cow position: chr2:10186444-10186083 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 205

Conread position: 406-754
Cow position: chr2:11159338-11158974 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 0

Conread position: 413-753
Cow position: chr2:54737297-54737651 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 0

Conread position: 413-754
Cow position: chr2:49590190-49590547 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 0

Conread position: 413-754
Cow position: chr2:57334985-57335342 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 0

Conread position: 413-754
Cow position: chr2:59413891-59413535 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 0

Conread position: 416-746
Cow position: chr2:39421372-39421715 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 190

Conread position: 416-753
Cow position: chr2:9907706-9908058 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 0

Conread position: 416-753
Cow position: chr2:25030683-25030335 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 159

Conread position: 416-754
Cow position: chr2:2088380-2088027 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 0

Conread position: 416-754
Cow position: chr2:3324771-3324414 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 0

Conread position: 416-754
Cow position: chr2:5474309-5474662 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 0

Conread position: 416-754
Cow position: chr2:47038621-47038268 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 0

Conread position: 416-754
Cow position: chr2:49472040-49472393 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 0

Conread position: 416-754
Cow position: chr2:57588489-57588842 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 82

Conread position: 417-754
Cow position: chr2:10611832-10611485 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 157

Conread position: 419-754
Cow position: chr2:2380904-2381253 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 0

Conread position: 419-754
Cow position: chr2:13045904-13045558 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 301

Conread position: 419-754
Cow position: chr2:22077580-22077930 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 420-751
Cow position: chr2:28650426-28650083 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 33

Conread position: 423-754
Cow position: chr2:282885-282540 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 39

Conread position: 423-754
Cow position: chr2:16900056-16900398 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 27

Conread position: 426-754
Cow position: chr2:5870547-5870216 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 72

Conread position: 436-754
Cow position: chr2:5905045-5904715 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 240

Conread position: 437-750
Cow position: chr2:2412981-2412654 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 0

Conread position: 445-754
Cow position: chr2:51990425-51990103 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 0

Conread position: 447-754
Cow position: chr2:4403332-4403011 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 0

Conread position: 447-754
Cow position: chr2:26921510-26921822 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 154

Conread position: 447-754
Cow position: chr2:80955811-80955490 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 0

Conread position: 461-751
Cow position: chr2:80293108-80292810 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 263

Conread position: 478-754
Cow position: chr2:31297659-31297943 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 15

Conread position: 479-754
Cow position: chr2:212361-212076 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 0

Conread position: 479-754
Cow position: chr2:42671125-42670843 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 0

Conread position: 485-754
Cow position: chr2:44935053-44934770 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 0

Conread position: 485-754
Cow position: chr2:72597479-72597753 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 207
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 125

Conread position: 498-750
Cow position: chr2:41657063-41657317 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 200
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 38, 98

Conread position: 523-754
Cow position: chr2:32066171-32065933 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 176

Conread position: 557-754
Cow position: chr2:78742520-78742715 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 155
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 79, 41

Conread position: 584-754
Cow position: chr2:54485754-54485577 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 138
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 52, 0

Conread position: 603-736
Cow position: chr2:41150614-41150750 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 109
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 33, 0

Conread position: 622-746
Cow position: chr2:573607-573731 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 101
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 15, 87

Conread position: 631-754
Cow position: chr2:365040-364913 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 103
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 84, 0

Conread position: 339-754
Cow position: chr20:15097636-15097210 (view UCSC Genome Browser custom track)
Alignm length: 431
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 34

Conread position: 351-754
Cow position: chr20:8215752-8216184 (view UCSC Genome Browser custom track)
Alignm length: 433
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 0

Conread position: 370-746
Cow position: chr20:18315040-18314681 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 273
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 27, 39

Conread position: 381-754
Cow position: chr20:30684609-30684989 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 24

Conread position: 396-754
Cow position: chr20:13679747-13679375 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 14

Conread position: 403-754
Cow position: chr20:21393901-21394261 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 14

Conread position: 406-745
Cow position: chr20:5535241-5535594 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 0

Conread position: 406-754
Cow position: chr20:25850687-25850329 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 49

Conread position: 406-754
Cow position: chr20:27869501-27869868 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 94

Conread position: 406-754
Cow position: chr20:28161074-28161433 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 0

Conread position: 416-754
Cow position: chr20:25961411-25961764 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 0

Conread position: 416-754
Cow position: chr20:38350986-38351337 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 185

Conread position: 419-719
Cow position: chr20:3271021-3271326 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 221
Alignm E-value: 9.00054e-42
Alignm gaps (pig, cow): 18, 27

Conread position: 420-754
Cow position: chr20:21914647-21914983 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 34

Conread position: 423-751
Cow position: chr20:28565274-28564930 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 39

Conread position: 423-754
Cow position: chr20:13763226-13763572 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 0

Conread position: 540-754
Cow position: chr20:12568964-12569186 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 179
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 0

Conread position: 545-745
Cow position: chr20:14870499-14870293 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 151
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 11, 141

Conread position: 549-750
Cow position: chr20:15065723-15065926 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 152
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 92, 163

Conread position: 556-754
Cow position: chr20:8974354-8974151 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 161
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 77, 143

Conread position: 616-754
Cow position: chr20:17661557-17661412 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 120
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 18, 0

Conread position: 320-746
Cow position: chr21:359706-360134 (view UCSC Genome Browser custom track)
Alignm length: 440
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 59

Conread position: 326-754
Cow position: chr21:27565733-27566189 (view UCSC Genome Browser custom track)
Alignm length: 458
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 28

Conread position: 339-746
Cow position: chr21:40271323-40270902 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 55

Conread position: 343-754
Cow position: chr21:35144120-35144540 (view UCSC Genome Browser custom track)
Alignm length: 425
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 30

Conread position: 351-754
Cow position: chr21:23861685-23862105 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 100

Conread position: 355-711
Cow position: chr21:9892316-9892666 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 120, 64

Conread position: 365-751
Cow position: chr21:23812553-23812953 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 136

Conread position: 400-753
Cow position: chr21:2883327-2882961 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 32

Conread position: 405-754
Cow position: chr21:33251932-33252286 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 5

Conread position: 406-731
Cow position: chr21:3779189-3779532 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 0

Conread position: 406-746
Cow position: chr21:10567091-10567445 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 291

Conread position: 406-754
Cow position: chr21:146345-146706 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 0

Conread position: 406-754
Cow position: chr21:30562225-30562584 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 258

Conread position: 406-754
Cow position: chr21:30599503-30599144 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 60

Conread position: 413-754
Cow position: chr21:11453233-11452878 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 194

Conread position: 413-754
Cow position: chr21:37046043-37046400 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 0

Conread position: 416-750
Cow position: chr21:11406569-11406220 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 0

Conread position: 416-750
Cow position: chr21:39425490-39425837 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 138

Conread position: 416-754
Cow position: chr21:2476114-2475761 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 0

Conread position: 416-754
Cow position: chr21:4091076-4091428 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 0

Conread position: 416-754
Cow position: chr21:11506023-11506375 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 281

Conread position: 416-754
Cow position: chr21:37371672-37372025 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 0

Conread position: 423-751
Cow position: chr21:28735669-28736012 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 340

Conread position: 423-754
Cow position: chr21:10850518-10850858 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 39

Conread position: 425-754
Cow position: chr21:467333-467657 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 109

Conread position: 447-753
Cow position: chr21:12055542-12055222 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 50

Conread position: 447-754
Cow position: chr21:2511355-2511675 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 6

Conread position: 474-754
Cow position: chr21:1287728-1287440 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 89

Conread position: 496-754
Cow position: chr21:1192270-1192538 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 0

Conread position: 554-754
Cow position: chr21:26637624-26637418 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 165
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 82, 0

Conread position: 637-754
Cow position: chr21:5840607-5840486 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 101
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 75, 0

Conread position: 640-754
Cow position: chr21:5015631-5015518 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 96
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 68, 0

Conread position: 660-754
Cow position: chr21:27149594-27149692 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 84
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 55, 0

Conread position: 324-727
Cow position: chr22:13917998-13918420 (view UCSC Genome Browser custom track)
Alignm length: 427
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 34

Conread position: 325-682
Cow position: chr22:1322294-1322659 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 111

Conread position: 325-746
Cow position: chr22:23853832-23854253 (view UCSC Genome Browser custom track)
Alignm length: 433
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 29

Conread position: 326-710
Cow position: chr22:35907225-35906832 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 346

Conread position: 336-524
Cow position: chr22:1283145-1282947 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 143
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 65, 133

Conread position: 339-753
Cow position: chr22:18816198-18815773 (view UCSC Genome Browser custom track)
Alignm length: 429
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 135, 71

Conread position: 339-754
Cow position: chr22:31334851-31334429 (view UCSC Genome Browser custom track)
Alignm length: 428
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 34

Conread position: 339-754
Cow position: chr22:42991359-42991785 (view UCSC Genome Browser custom track)
Alignm length: 431
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 34

Conread position: 356-710
Cow position: chr22:36269426-36269794 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 90

Conread position: 362-754
Cow position: chr22:3306199-3305793 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 27

Conread position: 397-753
Cow position: chr22:46630802-46630437 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 20

Conread position: 399-754
Cow position: chr22:34599649-34600002 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 11

Conread position: 406-746
Cow position: chr22:34168581-34168936 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 57

Conread position: 406-754
Cow position: chr22:31313589-31313952 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 286

Conread position: 408-754
Cow position: chr22:44352722-44352378 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 9

Conread position: 413-754
Cow position: chr22:18027529-18027887 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 0

Conread position: 416-750
Cow position: chr22:35672102-35671753 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 0

Conread position: 416-754
Cow position: chr22:537355-537706 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 82

Conread position: 416-754
Cow position: chr22:1879047-1879399 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 0

Conread position: 416-754
Cow position: chr22:3278102-3277749 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 216

Conread position: 416-754
Cow position: chr22:6020916-6021268 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 217

Conread position: 416-754
Cow position: chr22:24950350-24950703 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 0

Conread position: 416-754
Cow position: chr22:27284285-27284638 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 0

Conread position: 416-754
Cow position: chr22:27309519-27309170 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 0

Conread position: 416-754
Cow position: chr22:44369372-44369020 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 107

Conread position: 419-754
Cow position: chr22:21589588-21589943 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 209

Conread position: 420-754
Cow position: chr22:15313686-15313343 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 36

Conread position: 420-754
Cow position: chr22:36184022-36184363 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 111

Conread position: 423-754
Cow position: chr22:17328471-17328126 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 31

Conread position: 436-754
Cow position: chr22:5233007-5232674 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 0

Conread position: 437-754
Cow position: chr22:20240566-20240237 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 86

Conread position: 447-750
Cow position: chr22:10909547-10909232 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 0

Conread position: 447-754
Cow position: chr22:693909-694231 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 0

Conread position: 479-728
Cow position: chr22:5698546-5698303 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 167
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 237, 28

Conread position: 535-754
Cow position: chr22:14629797-14630024 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 178
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 0

Conread position: 550-754
Cow position: chr22:42988958-42989169 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 165
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 86, 0

Conread position: 578-754
Cow position: chr22:44491457-44491639 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 144
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 58, 176

Conread position: 326-754
Cow position: chr23:26836833-26837262 (view UCSC Genome Browser custom track)
Alignm length: 440
Alignm identity: 295
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 55, 36

Conread position: 331-746
Cow position: chr23:27399682-27400105 (view UCSC Genome Browser custom track)
Alignm length: 429
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 42

Conread position: 332-744
Cow position: chr23:4752776-4753193 (view UCSC Genome Browser custom track)
Alignm length: 428
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 30

Conread position: 333-749
Cow position: chr23:14974382-14973956 (view UCSC Genome Browser custom track)
Alignm length: 436
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 67

Conread position: 337-619
Cow position: chr23:9545758-9546050 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 213
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 63, 275

Conread position: 337-754
Cow position: chr23:29648068-29647650 (view UCSC Genome Browser custom track)
Alignm length: 429
Alignm identity: 267
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 94, 20

Conread position: 339-754
Cow position: chr23:20156028-20155602 (view UCSC Genome Browser custom track)
Alignm length: 432
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 34

Conread position: 354-754
Cow position: chr23:16615238-16614830 (view UCSC Genome Browser custom track)
Alignm length: 415
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 63

Conread position: 356-746
Cow position: chr23:5874441-5874050 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 22

Conread position: 388-750
Cow position: chr23:17786097-17785719 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 0

Conread position: 405-746
Cow position: chr23:3014642-3014999 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 0

Conread position: 405-754
Cow position: chr23:2716642-2716999 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 5

Conread position: 405-754
Cow position: chr23:2757843-2758208 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 285

Conread position: 406-754
Cow position: chr23:4888923-4889291 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 198

Conread position: 406-754
Cow position: chr23:19489792-19490150 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 41

Conread position: 408-754
Cow position: chr23:36031125-36030767 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 0

Conread position: 416-754
Cow position: chr23:19950329-19949988 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 20

Conread position: 416-754
Cow position: chr23:20302466-20302808 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 237

Conread position: 416-754
Cow position: chr23:31447069-31447422 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 0

Conread position: 419-746
Cow position: chr23:2781951-2781609 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 204

Conread position: 419-754
Cow position: chr23:15177336-15177681 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 35

Conread position: 419-754
Cow position: chr23:28913656-28914002 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 212

Conread position: 420-754
Cow position: chr23:16616580-16616232 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 0

Conread position: 427-754
Cow position: chr23:967078-966731 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 28

Conread position: 437-754
Cow position: chr23:23830242-23830567 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 99

Conread position: 437-754
Cow position: chr23:28217566-28217897 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 0

Conread position: 449-754
Cow position: chr23:2312951-2312633 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 0

Conread position: 474-753
Cow position: chr23:4817339-4817628 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 205

Conread position: 520-746
Cow position: chr23:28025032-28025268 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 186
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 0

Conread position: 535-754
Cow position: chr23:27970920-27971147 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 184
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 0

Conread position: 603-746
Cow position: chr23:3880626-3880481 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 120
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 29, 108

Conread position: 631-751
Cow position: chr23:3706601-3706725 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 103
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 81, 0

Conread position: 631-754
Cow position: chr23:2026601-2026474 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 100
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 81, 0

Conread position: 648-754
Cow position: chr23:38794702-38794812 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 91
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 64, 0

Conread position: 327-671
Cow position: chr24:7090932-7090556 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 261
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 74, 0

Conread position: 330-754
Cow position: chr24:12237491-12237935 (view UCSC Genome Browser custom track)
Alignm length: 447
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 56

Conread position: 337-568
Cow position: chr24:32332283-32332527 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 176
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 63, 24

Conread position: 341-754
Cow position: chr24:16648723-16648284 (view UCSC Genome Browser custom track)
Alignm length: 443
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 159

Conread position: 351-750
Cow position: chr24:12206032-12205623 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 180

Conread position: 354-754
Cow position: chr24:36559481-36559063 (view UCSC Genome Browser custom track)
Alignm length: 422
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 105

Conread position: 358-754
Cow position: chr24:7061689-7062087 (view UCSC Genome Browser custom track)
Alignm length: 408
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 24

Conread position: 403-618
Cow position: chr24:37217348-37217564 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 164
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 70, 16

Conread position: 405-754
Cow position: chr24:12130639-12130281 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 305

Conread position: 405-754
Cow position: chr24:17696638-17696280 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 32

Conread position: 405-754
Cow position: chr24:29187623-29187982 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 5

Conread position: 406-754
Cow position: chr24:22971426-22971786 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 90

Conread position: 413-754
Cow position: chr24:12484981-12484625 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 54

Conread position: 416-750
Cow position: chr24:40549214-40549554 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 142

Conread position: 416-753
Cow position: chr24:29305983-29305630 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 0

Conread position: 416-754
Cow position: chr24:43814104-43814456 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 154

Conread position: 416-754
Cow position: chr24:44017874-44018226 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 0

Conread position: 420-754
Cow position: chr24:12086550-12086896 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 0

Conread position: 420-754
Cow position: chr24:33933718-33934066 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 0

Conread position: 424-754
Cow position: chr24:4415174-4414840 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 29

Conread position: 427-754
Cow position: chr24:148261-147918 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 0

Conread position: 437-754
Cow position: chr24:6646062-6646393 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 0

Conread position: 437-754
Cow position: chr24:9188370-9188042 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 169

Conread position: 447-753
Cow position: chr24:33738968-33738647 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 0

Conread position: 447-754
Cow position: chr24:5992857-5992533 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 0

Conread position: 447-754
Cow position: chr24:22793544-22793869 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 0

Conread position: 468-754
Cow position: chr24:6084468-6084760 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 253

Conread position: 474-751
Cow position: chr24:6660092-6659806 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 283

Conread position: 474-754
Cow position: chr24:6024700-6024412 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 0

Conread position: 485-754
Cow position: chr24:14754587-14754307 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 0

Conread position: 496-754
Cow position: chr24:23505437-23505173 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 170

Conread position: 548-753
Cow position: chr24:9544542-9544755 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 171
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 9, 57

Conread position: 567-754
Cow position: chr24:19702005-19702177 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 139
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 48, 0

Conread position: 575-746
Cow position: chr24:12700312-12700133 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 136
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 68, 0

Conread position: 640-754
Cow position: chr24:8030864-8030982 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 100
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 75, 0

Conread position: 641-754
Cow position: chr24:6435052-6435170 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 97
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 45, 0

Conread position: 323-631
Cow position: chr25:18094410-18094724 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 216
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 79, 55

Conread position: 333-754
Cow position: chr25:12942480-12942044 (view UCSC Genome Browser custom track)
Alignm length: 441
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 34

Conread position: 390-744
Cow position: chr25:18152926-18153294 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 244
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 12, 34

Conread position: 406-754
Cow position: chr25:18889723-18889362 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 50

Conread position: 406-754
Cow position: chr25:26279551-26279896 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 36

Conread position: 416-753
Cow position: chr25:13550734-13550382 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 0

Conread position: 416-754
Cow position: chr25:6172199-6172552 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 0

Conread position: 416-754
Cow position: chr25:18194802-18194451 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 226

Conread position: 416-754
Cow position: chr25:19917380-19917733 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 0

Conread position: 419-754
Cow position: chr25:18303705-18304055 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 0

Conread position: 420-754
Cow position: chr25:24659559-24659903 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 278

Conread position: 423-754
Cow position: chr25:34014178-34013827 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 32

Conread position: 437-754
Cow position: chr25:32580283-32580613 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 0

Conread position: 458-754
Cow position: chr25:26879538-26879844 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 229

Conread position: 474-754
Cow position: chr25:17589195-17588904 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 0

Conread position: 474-754
Cow position: chr25:27022204-27021920 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 126

Conread position: 479-754
Cow position: chr25:20775556-20775276 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 239

Conread position: 479-754
Cow position: chr25:22147909-22148192 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 89

Conread position: 501-754
Cow position: chr25:18175670-18175929 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 63

Conread position: 523-754
Cow position: chr25:20630045-20630285 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 194
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 0

Conread position: 592-754
Cow position: chr25:33664737-33664568 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 130
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 40, 108

Conread position: 593-753
Cow position: chr25:25507188-25507355 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 136
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 43, 0

Conread position: 326-748
Cow position: chr26:17680547-17680116 (view UCSC Genome Browser custom track)
Alignm length: 442
Alignm identity: 293
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 49, 36

Conread position: 406-746
Cow position: chr26:9563045-9562690 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 173

Conread position: 406-751
Cow position: chr26:6849124-6848773 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 263

Conread position: 406-754
Cow position: chr26:19351201-19350842 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 290

Conread position: 412-754
Cow position: chr26:30589055-30588696 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 0

Conread position: 416-754
Cow position: chr26:2198943-2199296 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 0

Conread position: 416-754
Cow position: chr26:2352043-2351692 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 105

Conread position: 416-754
Cow position: chr26:30783060-30783413 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 0

Conread position: 419-754
Cow position: chr26:17396605-17396242 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 0

Conread position: 437-754
Cow position: chr26:15144421-15144090 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 0

Conread position: 447-750
Cow position: chr26:12588216-12587899 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 0

Conread position: 447-752
Cow position: chr26:8919199-8919516 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 152

Conread position: 447-754
Cow position: chr26:3030479-3030158 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 0

Conread position: 447-754
Cow position: chr26:4806212-4805891 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 225

Conread position: 447-754
Cow position: chr26:18852568-18852890 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 0

Conread position: 461-754
Cow position: chr26:9844522-9844231 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 221
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 75, 109

Conread position: 484-754
Cow position: chr26:21826289-21826010 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 145

Conread position: 323-733
Cow position: chr27:26555496-26555074 (view UCSC Genome Browser custom track)
Alignm length: 427
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 51

Conread position: 351-579
Cow position: chr27:8567914-8568152 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 172
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 50, 95

Conread position: 405-746
Cow position: chr27:15277815-15277464 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 31

Conread position: 406-746
Cow position: chr27:15638120-15637768 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 212

Conread position: 406-754
Cow position: chr27:1209601-1209963 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 213

Conread position: 413-754
Cow position: chr27:9329981-9330335 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 30

Conread position: 416-754
Cow position: chr27:15541583-15541936 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 0

Conread position: 416-754
Cow position: chr27:16034140-16033787 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 0

Conread position: 419-746
Cow position: chr27:27752938-27752608 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 204

Conread position: 420-754
Cow position: chr27:14460190-14459843 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 33

Conread position: 423-754
Cow position: chr27:23335431-23335774 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 0

Conread position: 474-754
Cow position: chr27:15037268-15036980 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 282

Conread position: 474-754
Cow position: chr27:15046493-15046779 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 280

Conread position: 486-754
Cow position: chr27:26325402-26325680 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 0

Conread position: 551-744
Cow position: chr27:17421954-17422144 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 135
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 93, 133

Conread position: 321-750
Cow position: chr28:7789741-7789299 (view UCSC Genome Browser custom track)
Alignm length: 444
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 439

Conread position: 324-571
Cow position: chr28:21359548-21359806 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 187
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 40, 0

Conread position: 324-754
Cow position: chr28:782606-783049 (view UCSC Genome Browser custom track)
Alignm length: 449
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 65

Conread position: 337-710
Cow position: chr28:3020516-3020144 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 134, 70

Conread position: 339-753
Cow position: chr28:2989014-2988586 (view UCSC Genome Browser custom track)
Alignm length: 429
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 0

Conread position: 339-754
Cow position: chr28:22260919-22260498 (view UCSC Genome Browser custom track)
Alignm length: 429
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 34

Conread position: 350-528
Cow position: chr28:32330464-32330282 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 133
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 50, 71

Conread position: 351-750
Cow position: chr28:10497781-10497373 (view UCSC Genome Browser custom track)
Alignm length: 416
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 219

Conread position: 355-753
Cow position: chr28:10071528-10071928 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 61

Conread position: 386-753
Cow position: chr28:18520167-18519793 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 55

Conread position: 406-746
Cow position: chr28:5114004-5113651 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 0

Conread position: 406-754
Cow position: chr28:5566439-5566807 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 0

Conread position: 406-754
Cow position: chr28:5751411-5751051 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 226

Conread position: 406-754
Cow position: chr28:12150598-12150958 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 0

Conread position: 406-754
Cow position: chr28:17667003-17666649 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 50

Conread position: 412-754
Cow position: chr28:12409927-12409573 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 44

Conread position: 415-746
Cow position: chr28:22233101-22232756 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 0

Conread position: 416-754
Cow position: chr28:1953428-1953783 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 0

Conread position: 416-754
Cow position: chr28:7822556-7822909 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 0

Conread position: 419-710
Cow position: chr28:10581677-10581374 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 0

Conread position: 419-746
Cow position: chr28:1167574-1167232 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 0

Conread position: 420-754
Cow position: chr28:26425941-26425593 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 34

Conread position: 423-754
Cow position: chr28:1387090-1386745 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 33

Conread position: 423-754
Cow position: chr28:13460282-13460625 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 39

Conread position: 433-754
Cow position: chr28:6780011-6779686 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 16

Conread position: 437-754
Cow position: chr28:6538941-6538610 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 0

Conread position: 447-754
Cow position: chr28:14750877-14751197 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 74

Conread position: 458-745
Cow position: chr28:33258996-33259284 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 195
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 79, 11

Conread position: 461-751
Cow position: chr28:3191895-3191602 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 106

Conread position: 474-754
Cow position: chr28:2724561-2724271 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 0

Conread position: 474-754
Cow position: chr28:24589213-24589505 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 0

Conread position: 539-754
Cow position: chr28:8379268-8379490 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 180
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 130

Conread position: 565-726
Cow position: chr28:10617328-10617166 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 123
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 71, 32

Conread position: 565-753
Cow position: chr28:21359937-21360132 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 155
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 68, 0

Conread position: 590-751
Cow position: chr28:14704903-14704739 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 131
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 37, 72

Conread position: 320-752
Cow position: chr29:14085950-14085512 (view UCSC Genome Browser custom track)
Alignm length: 448
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 41

Conread position: 328-754
Cow position: chr29:45459902-45460339 (view UCSC Genome Browser custom track)
Alignm length: 443
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 45

Conread position: 339-746
Cow position: chr29:10648054-10647640 (view UCSC Genome Browser custom track)
Alignm length: 422
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 73

Conread position: 339-753
Cow position: chr29:25932347-25931921 (view UCSC Genome Browser custom track)
Alignm length: 432
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 31

Conread position: 343-746
Cow position: chr29:5982506-5982102 (view UCSC Genome Browser custom track)
Alignm length: 416
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 139, 22

Conread position: 350-754
Cow position: chr29:15949347-15948934 (view UCSC Genome Browser custom track)
Alignm length: 422
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 10

Conread position: 406-746
Cow position: chr29:2841113-2840768 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 122

Conread position: 406-751
Cow position: chr29:2690160-2690520 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 357

Conread position: 406-754
Cow position: chr29:2100105-2100469 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 0

Conread position: 406-754
Cow position: chr29:10823709-10823352 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 214

Conread position: 406-754
Cow position: chr29:16022790-16023156 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 0

Conread position: 406-754
Cow position: chr29:40502722-40502360 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 26

Conread position: 415-754
Cow position: chr29:19885334-19885684 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 145

Conread position: 415-754
Cow position: chr29:45587096-45586744 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 33

Conread position: 416-754
Cow position: chr29:610348-609999 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 159

Conread position: 416-754
Cow position: chr29:15968597-15968244 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 0

Conread position: 416-754
Cow position: chr29:27250078-27249726 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 106

Conread position: 416-754
Cow position: chr29:34925743-34926095 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 206

Conread position: 419-746
Cow position: chr29:5957877-5958211 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 256

Conread position: 419-754
Cow position: chr29:43322827-43323177 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 0

Conread position: 420-754
Cow position: chr29:39079436-39079088 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 166

Conread position: 437-754
Cow position: chr29:7844617-7844948 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 0

Conread position: 437-754
Cow position: chr29:18856658-18856327 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 182

Conread position: 437-754
Cow position: chr29:27980633-27980308 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 299

Conread position: 437-754
Cow position: chr29:31181701-31182021 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 101

Conread position: 447-754
Cow position: chr29:669761-669441 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 153

Conread position: 447-754
Cow position: chr29:15894554-15894233 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 0

Conread position: 448-754
Cow position: chr29:13582373-13582679 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 18

Conread position: 474-752
Cow position: chr29:35297196-35297485 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 0

Conread position: 575-754
Cow position: chr29:32559324-32559138 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 147
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 61, 0

Conread position: 314-656
Cow position: chr3:64357749-64357411 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 254
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 148, 71

Conread position: 321-746
Cow position: chr3:2907660-2907244 (view UCSC Genome Browser custom track)
Alignm length: 437
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 34

Conread position: 322-754
Cow position: chr3:31415639-31416066 (view UCSC Genome Browser custom track)
Alignm length: 440
Alignm identity: 291
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 35, 44

Conread position: 323-754
Cow position: chr3:57589671-57590110 (view UCSC Genome Browser custom track)
Alignm length: 445
Alignm identity: 278
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 36, 82

Conread position: 323-754
Cow position: chr3:58947721-58948150 (view UCSC Genome Browser custom track)
Alignm length: 443
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 42

Conread position: 337-696
Cow position: chr3:26836648-26836317 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 254
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 217, 24

Conread position: 339-753
Cow position: chr3:5883654-5884075 (view UCSC Genome Browser custom track)
Alignm length: 428
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 34

Conread position: 351-746
Cow position: chr3:52864015-52863602 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 0

Conread position: 351-751
Cow position: chr3:48230335-48229934 (view UCSC Genome Browser custom track)
Alignm length: 419
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 22

Conread position: 352-754
Cow position: chr3:6685925-6686345 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 155

Conread position: 375-754
Cow position: chr3:23290188-23289801 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 25

Conread position: 387-754
Cow position: chr3:18463412-18463032 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 111

Conread position: 395-713
Cow position: chr3:16073899-16074217 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 235
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 24, 19

Conread position: 405-754
Cow position: chr3:49137358-49137006 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 17

Conread position: 406-710
Cow position: chr3:36881744-36881425 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 0

Conread position: 406-746
Cow position: chr3:57484552-57484198 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 170

Conread position: 406-753
Cow position: chr3:64017187-64016829 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 56

Conread position: 406-754
Cow position: chr3:7481054-7480696 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 173

Conread position: 406-754
Cow position: chr3:18811678-18812042 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 0

Conread position: 406-754
Cow position: chr3:19756781-19756416 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 50

Conread position: 406-754
Cow position: chr3:34030721-34030360 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 0

Conread position: 406-754
Cow position: chr3:72630248-72630608 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 49

Conread position: 406-754
Cow position: chr3:75040992-75040628 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 0

Conread position: 408-754
Cow position: chr3:63003366-63003013 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 137

Conread position: 410-745
Cow position: chr3:51940225-51939900 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 34

Conread position: 412-750
Cow position: chr3:45032918-45033272 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 0

Conread position: 412-753
Cow position: chr3:50011857-50012203 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 33

Conread position: 412-754
Cow position: chr3:19736758-19737115 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 0

Conread position: 416-750
Cow position: chr3:68699791-68699435 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 0

Conread position: 416-754
Cow position: chr3:2917643-2917995 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 102

Conread position: 416-754
Cow position: chr3:19878840-19879192 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 0

Conread position: 416-754
Cow position: chr3:32622855-32622510 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 310

Conread position: 416-754
Cow position: chr3:36117845-36118196 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 214

Conread position: 416-754
Cow position: chr3:46679613-46679965 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 0

Conread position: 416-754
Cow position: chr3:64027904-64027551 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 0

Conread position: 417-754
Cow position: chr3:37969230-37969580 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 98

Conread position: 419-754
Cow position: chr3:3523207-3523554 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 199

Conread position: 419-754
Cow position: chr3:66890777-66890428 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 0

Conread position: 420-746
Cow position: chr3:46502727-46503065 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 0

Conread position: 420-754
Cow position: chr3:56340233-56339887 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 0

Conread position: 423-745
Cow position: chr3:49545011-49544682 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 18

Conread position: 423-753
Cow position: chr3:10239849-10240195 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 0

Conread position: 423-754
Cow position: chr3:40823583-40823925 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 39

Conread position: 426-754
Cow position: chr3:59861565-59861907 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 36

Conread position: 437-751
Cow position: chr3:49613773-49613444 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 0

Conread position: 437-753
Cow position: chr3:41211533-41211201 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 0

Conread position: 447-750
Cow position: chr3:68873541-68873224 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 0

Conread position: 447-754
Cow position: chr3:22336102-22336423 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 0

Conread position: 447-754
Cow position: chr3:24314681-24315001 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 227

Conread position: 447-754
Cow position: chr3:29331057-29330736 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 0

Conread position: 447-754
Cow position: chr3:64650840-64651161 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 0

Conread position: 468-754
Cow position: chr3:7158480-7158181 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 28

Conread position: 475-754
Cow position: chr3:47081165-47080876 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 0

Conread position: 478-754
Cow position: chr3:27918684-27918969 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 0

Conread position: 517-754
Cow position: chr3:51242660-51242905 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 0

Conread position: 538-754
Cow position: chr3:47177965-47177741 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 175
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 17, 56

Conread position: 549-754
Cow position: chr3:4286121-4286333 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 170
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 0

Conread position: 560-754
Cow position: chr3:2710531-2710330 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 161
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 74, 0

Conread position: 579-753
Cow position: chr3:19944610-19944786 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 134
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 58, 132

Conread position: 599-751
Cow position: chr3:38493627-38493785 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 126
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 37, 155

Conread position: 642-754
Cow position: chr3:19800759-19800643 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 93
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 73, 0

Conread position: 317-745
Cow position: chr4:60264268-60263829 (view UCSC Genome Browser custom track)
Alignm length: 444
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 15

Conread position: 325-587
Cow position: chr4:14549892-14550160 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 181
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 87, 36

Conread position: 331-754
Cow position: chr4:45049387-45048952 (view UCSC Genome Browser custom track)
Alignm length: 440
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 42

Conread position: 333-754
Cow position: chr4:31565390-31564962 (view UCSC Genome Browser custom track)
Alignm length: 438
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 40

Conread position: 339-754
Cow position: chr4:46664424-46664861 (view UCSC Genome Browser custom track)
Alignm length: 439
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 167

Conread position: 342-731
Cow position: chr4:15194529-15194925 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 262
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 85, 20

Conread position: 400-678
Cow position: chr4:12607677-12607406 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 10

Conread position: 405-754
Cow position: chr4:25599515-25599156 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 5

Conread position: 406-745
Cow position: chr4:6490382-6490032 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 213

Conread position: 406-753
Cow position: chr4:17926272-17925908 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 0

Conread position: 406-754
Cow position: chr4:36896350-36896714 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 0

Conread position: 406-754
Cow position: chr4:41120286-41120662 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 0

Conread position: 406-754
Cow position: chr4:43319664-43319300 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 0

Conread position: 411-754
Cow position: chr4:26886871-26886515 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 43

Conread position: 415-754
Cow position: chr4:4416069-4416414 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 43

Conread position: 416-749
Cow position: chr4:100946-100599 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 0

Conread position: 416-754
Cow position: chr4:3125782-3126135 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 0

Conread position: 416-754
Cow position: chr4:13548016-13548368 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 155

Conread position: 416-754
Cow position: chr4:16326788-16326435 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 0

Conread position: 416-754
Cow position: chr4:18190392-18190745 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 0

Conread position: 416-754
Cow position: chr4:18424538-18424185 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 0

Conread position: 419-750
Cow position: chr4:355905-356244 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 175

Conread position: 419-754
Cow position: chr4:32212158-32212507 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 78

Conread position: 423-754
Cow position: chr4:31669272-31669615 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 0

Conread position: 437-754
Cow position: chr4:5880174-5880505 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 265

Conread position: 446-754
Cow position: chr4:9354758-9354437 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 0

Conread position: 447-754
Cow position: chr4:1930605-1930285 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 0

Conread position: 474-751
Cow position: chr4:13493365-13493654 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 286

Conread position: 474-754
Cow position: chr4:33072771-33072481 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 0

Conread position: 479-754
Cow position: chr4:6268577-6268288 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 0

Conread position: 562-754
Cow position: chr4:159296-159493 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 152
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 70, 0

Conread position: 631-754
Cow position: chr4:27333921-27334048 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 107
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 81, 0

Conread position: 325-745
Cow position: chr5:41528760-41528333 (view UCSC Genome Browser custom track)
Alignm length: 433
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 112, 29

Conread position: 331-754
Cow position: chr5:39247001-39246569 (view UCSC Genome Browser custom track)
Alignm length: 442
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 30

Conread position: 337-576
Cow position: chr5:41961927-41961688 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 182
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 138, 64

Conread position: 339-754
Cow position: chr5:30579336-30579762 (view UCSC Genome Browser custom track)
Alignm length: 432
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 34

Conread position: 355-746
Cow position: chr5:46660068-46660460 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 215

Conread position: 400-754
Cow position: chr5:18663857-18664226 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 232

Conread position: 402-754
Cow position: chr5:46738504-46738139 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 52

Conread position: 405-753
Cow position: chr5:4385331-4385677 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 131, 32

Conread position: 406-746
Cow position: chr5:2914525-2914877 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 226

Conread position: 406-754
Cow position: chr5:415645-415282 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 214

Conread position: 406-754
Cow position: chr5:54792558-54792202 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 88

Conread position: 406-754
Cow position: chr5:55628063-55628426 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 50

Conread position: 406-754
Cow position: chr5:57482469-57482104 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 0

Conread position: 416-754
Cow position: chr5:3964533-3964884 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 6

Conread position: 416-754
Cow position: chr5:4089152-4089505 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 0

Conread position: 416-754
Cow position: chr5:6588939-6588585 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 190

Conread position: 416-754
Cow position: chr5:10482929-10483282 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 0

Conread position: 416-754
Cow position: chr5:18122387-18122042 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 93

Conread position: 416-754
Cow position: chr5:32772563-32772927 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 227

Conread position: 416-754
Cow position: chr5:44459564-44459917 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 0

Conread position: 416-754
Cow position: chr5:46776161-46776513 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 81

Conread position: 416-754
Cow position: chr5:48468198-48467846 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 0

Conread position: 419-754
Cow position: chr5:7273918-7274266 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 23

Conread position: 419-754
Cow position: chr5:31101535-31101190 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 257

Conread position: 419-754
Cow position: chr5:64781928-64781577 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 37

Conread position: 420-754
Cow position: chr5:34696696-34697038 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 28

Conread position: 426-754
Cow position: chr5:73489463-73489123 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 0

Conread position: 427-754
Cow position: chr5:37732445-37732786 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 0

Conread position: 437-754
Cow position: chr5:4019095-4018765 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 0

Conread position: 437-754
Cow position: chr5:23960212-23959881 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 0

Conread position: 445-754
Cow position: chr5:27909161-27908838 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 0

Conread position: 447-754
Cow position: chr5:10776151-10775830 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 0

Conread position: 447-754
Cow position: chr5:14380262-14380577 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 89

Conread position: 447-754
Cow position: chr5:18666107-18666428 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 184

Conread position: 458-754
Cow position: chr5:2531388-2531689 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 267

Conread position: 474-754
Cow position: chr5:4069365-4069655 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 0

Conread position: 474-754
Cow position: chr5:12643575-12643285 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 19

Conread position: 474-754
Cow position: chr5:24098818-24099107 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 149

Conread position: 474-754
Cow position: chr5:35300243-35300533 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 0

Conread position: 512-754
Cow position: chr5:241385-241636 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 5

Conread position: 578-754
Cow position: chr5:46807563-46807746 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 143
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 63, 0

Conread position: 585-754
Cow position: chr5:26343260-26343435 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 135
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 51, 41

Conread position: 590-754
Cow position: chr5:4757901-4757729 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 135
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 46, 0

Conread position: 602-754
Cow position: chr5:1341756-1341597 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 129
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 32, 0

Conread position: 608-754
Cow position: chr5:45181863-45181710 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 123
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 24, 0

Conread position: 644-754
Cow position: chr5:44784593-44784479 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 92
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 71, 0

Conread position: 647-754
Cow position: chr5:38073356-38073466 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 94
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 68, 8

Conread position: 333-754
Cow position: chr6:3277800-3277380 (view UCSC Genome Browser custom track)
Alignm length: 432
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 40

Conread position: 336-695
Cow position: chr6:33995173-33994808 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 250
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 115, 25

Conread position: 339-754
Cow position: chr6:3889323-3888906 (view UCSC Genome Browser custom track)
Alignm length: 425
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 31

Conread position: 339-754
Cow position: chr6:10643698-10644115 (view UCSC Genome Browser custom track)
Alignm length: 433
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 109

Conread position: 354-573
Cow position: chr6:6475994-6475764 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 173
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 48, 14

Conread position: 383-754
Cow position: chr6:65928159-65928547 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 24

Conread position: 399-754
Cow position: chr6:1822418-1822051 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 6

Conread position: 400-746
Cow position: chr6:6566832-6567162 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 45

Conread position: 406-754
Cow position: chr6:913872-914211 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 254
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 31, 88

Conread position: 406-754
Cow position: chr6:5949560-5949198 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 0

Conread position: 406-754
Cow position: chr6:8761086-8760723 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 219

Conread position: 406-754
Cow position: chr6:20560893-20560530 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 57

Conread position: 406-754
Cow position: chr6:27529788-27529425 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 50

Conread position: 406-754
Cow position: chr6:35876499-35876137 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 0

Conread position: 412-754
Cow position: chr6:17046278-17046636 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 0

Conread position: 416-754
Cow position: chr6:10499501-10499148 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 0

Conread position: 416-754
Cow position: chr6:17598056-17597715 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 123

Conread position: 416-754
Cow position: chr6:24323158-24322805 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 0

Conread position: 416-754
Cow position: chr6:39908750-39909103 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 0

Conread position: 416-754
Cow position: chr6:44150333-44149980 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 0

Conread position: 416-754
Cow position: chr6:69221987-69221634 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 0

Conread position: 419-746
Cow position: chr6:24239297-24239625 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 29

Conread position: 419-754
Cow position: chr6:13104285-13104633 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 155

Conread position: 419-754
Cow position: chr6:40867329-40866984 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 300

Conread position: 419-754
Cow position: chr6:58026985-58027330 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 142

Conread position: 420-752
Cow position: chr6:13317270-13316928 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 72

Conread position: 420-754
Cow position: chr6:331237-330890 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 13

Conread position: 421-754
Cow position: chr6:13944134-13944483 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 78

Conread position: 423-750
Cow position: chr6:39437784-39438117 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 43

Conread position: 423-754
Cow position: chr6:15140943-15140606 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 18

Conread position: 423-754
Cow position: chr6:15280315-15279980 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 18

Conread position: 423-754
Cow position: chr6:30274942-30274601 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 296

Conread position: 437-754
Cow position: chr6:40251908-40252237 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 56

Conread position: 442-754
Cow position: chr6:28105597-28105277 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 67

Conread position: 445-754
Cow position: chr6:2374953-2375277 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 0

Conread position: 445-754
Cow position: chr6:27169834-27170156 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 0

Conread position: 447-750
Cow position: chr6:1411685-1411371 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 0

Conread position: 448-754
Cow position: chr6:40275344-40275664 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 0

Conread position: 454-746
Cow position: chr6:30479371-30479673 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 265

Conread position: 458-754
Cow position: chr6:26670596-26670292 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 13

Conread position: 459-750
Cow position: chr6:14852310-14852005 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 38

Conread position: 469-754
Cow position: chr6:7141179-7140886 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 31

Conread position: 470-754
Cow position: chr6:11724822-11724531 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 196

Conread position: 470-754
Cow position: chr6:43793428-43793133 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 214
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 66, 121

Conread position: 474-753
Cow position: chr6:16052165-16052455 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 0

Conread position: 474-753
Cow position: chr6:28063622-28063910 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 193

Conread position: 474-754
Cow position: chr6:12666027-12665743 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 82

Conread position: 485-754
Cow position: chr6:38233137-38233412 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 94

Conread position: 486-754
Cow position: chr6:21972956-21973233 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 0

Conread position: 542-753
Cow position: chr6:3488061-3487847 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 174
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 29

Conread position: 546-754
Cow position: chr6:186109-185893 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 173
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 0

Conread position: 568-751
Cow position: chr6:6475483-6475299 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 150
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 70, 32

Conread position: 572-754
Cow position: chr6:51714091-51714276 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 150
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 72, 85

Conread position: 579-750
Cow position: chr6:40326286-40326110 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 139
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 62, 8

Conread position: 601-753
Cow position: chr6:702328-702488 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 128
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 33, 0

Conread position: 645-753
Cow position: chr6:28491102-28490990 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 93
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 70, 0

Conread position: 652-754
Cow position: chr6:43999531-43999637 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 88
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 63, 0

Conread position: 659-754
Cow position: chr6:28703842-28703743 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 85
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 56, 0

Conread position: 325-584
Cow position: chr7:39107695-39107420 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 203
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 77, 134

Conread position: 325-754
Cow position: chr7:58993816-58994260 (view UCSC Genome Browser custom track)
Alignm length: 452
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 36

Conread position: 326-746
Cow position: chr7:68908548-68908977 (view UCSC Genome Browser custom track)
Alignm length: 438
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 32

Conread position: 326-754
Cow position: chr7:29470696-29471123 (view UCSC Genome Browser custom track)
Alignm length: 436
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 36

Conread position: 331-746
Cow position: chr7:48634664-48635096 (view UCSC Genome Browser custom track)
Alignm length: 436
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 185

Conread position: 339-754
Cow position: chr7:55537671-55537253 (view UCSC Genome Browser custom track)
Alignm length: 426
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 135, 22

Conread position: 343-734
Cow position: chr7:26851912-26852316 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 273
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 26, 40

Conread position: 351-754
Cow position: chr7:29370015-29369623 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 204, 24

Conread position: 362-572
Cow position: chr7:1734526-1734307 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 166
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 44, 129

Conread position: 378-572
Cow position: chr7:55280059-55279861 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 148
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 24, 43

Conread position: 406-753
Cow position: chr7:34149407-34149770 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 0

Conread position: 406-754
Cow position: chr7:1372343-1371979 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 0

Conread position: 406-754
Cow position: chr7:8144935-8144572 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 57

Conread position: 406-754
Cow position: chr7:13537275-13536918 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 50

Conread position: 406-754
Cow position: chr7:14139292-14138928 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 0

Conread position: 406-754
Cow position: chr7:21234703-21234344 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 53

Conread position: 406-754
Cow position: chr7:21985708-21986074 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 0

Conread position: 413-746
Cow position: chr7:60463458-60463807 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 0

Conread position: 416-753
Cow position: chr7:16559-16208 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 190

Conread position: 416-754
Cow position: chr7:11446869-11447223 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 0

Conread position: 416-754
Cow position: chr7:21320469-21320822 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 0

Conread position: 416-754
Cow position: chr7:61559526-61559879 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 0

Conread position: 419-754
Cow position: chr7:10431096-10430752 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 121

Conread position: 419-754
Cow position: chr7:34486236-34486584 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 0

Conread position: 420-745
Cow position: chr7:33405917-33405583 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 34

Conread position: 420-754
Cow position: chr7:21929467-21929815 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 77

Conread position: 423-754
Cow position: chr7:39792082-39792440 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 39

Conread position: 423-754
Cow position: chr7:45948825-45948483 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 172

Conread position: 425-754
Cow position: chr7:446300-445962 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 28

Conread position: 437-754
Cow position: chr7:20799111-20798774 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 0

Conread position: 447-754
Cow position: chr7:3300811-3300490 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 0

Conread position: 447-754
Cow position: chr7:61808577-61808898 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 0

Conread position: 448-754
Cow position: chr7:3234337-3234021 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 214

Conread position: 448-754
Cow position: chr7:38397166-38397481 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 218

Conread position: 449-746
Cow position: chr7:64241433-64241128 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 32

Conread position: 449-754
Cow position: chr7:20515425-20515107 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 0

Conread position: 458-746
Cow position: chr7:994879-995182 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 0

Conread position: 460-745
Cow position: chr7:27584356-27584060 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 209
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 77, 162

Conread position: 474-750
Cow position: chr7:60794926-60794639 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 0

Conread position: 485-754
Cow position: chr7:63386127-63386404 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 110

Conread position: 486-749
Cow position: chr7:11466383-11466120 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 154

Conread position: 487-754
Cow position: chr7:6489582-6489858 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 0

Conread position: 489-746
Cow position: chr7:67428323-67428598 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 203
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 59, 0

Conread position: 522-745
Cow position: chr7:62440895-62440666 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 160
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 26, 137

Conread position: 534-750
Cow position: chr7:3155682-3155910 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 179
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 14, 0

Conread position: 563-754
Cow position: chr7:67675585-67675782 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 148
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 70, 17

Conread position: 590-754
Cow position: chr7:27101799-27101628 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 136
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 46, 0

Conread position: 630-754
Cow position: chr7:15810938-15810810 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 103
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 66, 10

Conread position: 302-754
Cow position: chr8:19590530-19590986 (view UCSC Genome Browser custom track)
Alignm length: 457
Alignm identity: 100
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 413, 0

Conread position: 314-701
Cow position: chr8:24419791-24419406 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 173, 44

Conread position: 323-750
Cow position: chr8:38606785-38606347 (view UCSC Genome Browser custom track)
Alignm length: 443
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 114, 31

Conread position: 324-753
Cow position: chr8:7161307-7161750 (view UCSC Genome Browser custom track)
Alignm length: 446
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 131

Conread position: 324-754
Cow position: chr8:42468150-42468576 (view UCSC Genome Browser custom track)
Alignm length: 446
Alignm identity: 302
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 13, 80

Conread position: 335-754
Cow position: chr8:25522830-25523261 (view UCSC Genome Browser custom track)
Alignm length: 440
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 139, 38

Conread position: 340-745
Cow position: chr8:45216215-45216643 (view UCSC Genome Browser custom track)
Alignm length: 436
Alignm identity: 293
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 26, 248

Conread position: 351-751
Cow position: chr8:11969831-11969430 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 48

Conread position: 351-753
Cow position: chr8:42160975-42160573 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 179

Conread position: 351-754
Cow position: chr8:58186759-58186358 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 122, 50

Conread position: 352-656
Cow position: chr8:61034580-61034261 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 71

Conread position: 356-754
Cow position: chr8:14591452-14591048 (view UCSC Genome Browser custom track)
Alignm length: 408
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 17

Conread position: 369-627
Cow position: chr8:12717429-12717686 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 187
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 106, 39

Conread position: 386-754
Cow position: chr8:49214921-49215294 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 58

Conread position: 391-584
Cow position: chr8:33430883-33431083 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 150
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 84, 106

Conread position: 399-746
Cow position: chr8:45160583-45160222 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 46

Conread position: 400-745
Cow position: chr8:42658367-42658007 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 250
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 14, 20

Conread position: 405-754
Cow position: chr8:17311518-17311879 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 17

Conread position: 406-754
Cow position: chr8:12449444-12449806 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 9

Conread position: 406-754
Cow position: chr8:23771131-23771491 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 0

Conread position: 406-754
Cow position: chr8:25776177-25775813 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 213

Conread position: 406-754
Cow position: chr8:32319053-32318697 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 134

Conread position: 406-754
Cow position: chr8:42484408-42484772 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 0

Conread position: 406-754
Cow position: chr8:44244077-44243714 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 49

Conread position: 406-754
Cow position: chr8:60060876-60061236 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 0

Conread position: 412-754
Cow position: chr8:30891820-30891463 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 160

Conread position: 415-754
Cow position: chr8:25408229-25408584 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 48

Conread position: 415-754
Cow position: chr8:47069305-47068953 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 0

Conread position: 416-753
Cow position: chr8:1153807-1153457 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 6

Conread position: 416-754
Cow position: chr8:1319545-1319895 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 43

Conread position: 416-754
Cow position: chr8:1348735-1348379 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 83

Conread position: 416-754
Cow position: chr8:6683947-6684300 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 0

Conread position: 416-754
Cow position: chr8:8518083-8517730 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 0

Conread position: 416-754
Cow position: chr8:9735747-9736100 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 0

Conread position: 416-754
Cow position: chr8:15711916-15711563 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 0

Conread position: 416-754
Cow position: chr8:32437580-32437231 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 121

Conread position: 416-754
Cow position: chr8:32631527-32631174 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 0

Conread position: 416-754
Cow position: chr8:37931591-37931944 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 0

Conread position: 419-753
Cow position: chr8:19330247-19330594 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 34

Conread position: 420-751
Cow position: chr8:4686907-4687252 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 342

Conread position: 420-754
Cow position: chr8:46944407-46944054 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 0

Conread position: 423-754
Cow position: chr8:5016695-5017033 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 277

Conread position: 428-754
Cow position: chr8:47661806-47661466 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 268

Conread position: 437-754
Cow position: chr8:8556626-8556294 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 0

Conread position: 445-754
Cow position: chr8:2886281-2886603 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 52

Conread position: 447-754
Cow position: chr8:27578934-27579250 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 64

Conread position: 448-754
Cow position: chr8:6065235-6064915 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 49

Conread position: 466-754
Cow position: chr8:50288363-50288068 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 12

Conread position: 470-754
Cow position: chr8:8401550-8401261 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 244

Conread position: 470-754
Cow position: chr8:14928319-14928025 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 0

Conread position: 474-754
Cow position: chr8:9275745-9276036 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 111

Conread position: 474-754
Cow position: chr8:10748927-10749224 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 95

Conread position: 474-754
Cow position: chr8:22571747-22571456 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 18

Conread position: 476-753
Cow position: chr8:44107046-44107322 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 208
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 53, 18

Conread position: 496-745
Cow position: chr8:11762530-11762784 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 196
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 40, 69

Conread position: 500-754
Cow position: chr8:44074914-44074666 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 196
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 36, 174

Conread position: 542-754
Cow position: chr8:46050822-46051041 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 178
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 0

Conread position: 575-754
Cow position: chr8:59262251-59262064 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 150
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 59, 0

Conread position: 578-754
Cow position: chr8:25376431-25376614 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 144
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 58, 0

Conread position: 608-754
Cow position: chr8:59141026-59141180 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 120
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 28, 0

Conread position: 323-754
Cow position: chr9:32969035-32969456 (view UCSC Genome Browser custom track)
Alignm length: 443
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 51

Conread position: 326-754
Cow position: chr9:6249383-6249805 (view UCSC Genome Browser custom track)
Alignm length: 438
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 138, 47

Conread position: 332-751
Cow position: chr9:3803414-3803845 (view UCSC Genome Browser custom track)
Alignm length: 434
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 91

Conread position: 335-754
Cow position: chr9:3566771-3566330 (view UCSC Genome Browser custom track)
Alignm length: 446
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 43

Conread position: 339-746
Cow position: chr9:29628662-29628249 (view UCSC Genome Browser custom track)
Alignm length: 422
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 61

Conread position: 348-754
Cow position: chr9:13476802-13476375 (view UCSC Genome Browser custom track)
Alignm length: 429
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 14

Conread position: 349-754
Cow position: chr9:20309057-20308644 (view UCSC Genome Browser custom track)
Alignm length: 421
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 45

Conread position: 354-754
Cow position: chr9:64119322-64119723 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 95

Conread position: 368-740
Cow position: chr9:60464523-60464143 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 266
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 34, 53

Conread position: 375-754
Cow position: chr9:1980102-1980496 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 23

Conread position: 400-754
Cow position: chr9:42569043-42569408 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 10

Conread position: 403-754
Cow position: chr9:3006093-3005739 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 39

Conread position: 405-746
Cow position: chr9:240366-240044 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 242
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 87, 48

Conread position: 406-712
Cow position: chr9:37971062-37970749 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 292

Conread position: 406-746
Cow position: chr9:59174012-59173648 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 0

Conread position: 406-750
Cow position: chr9:59536243-59536597 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 155

Conread position: 406-751
Cow position: chr9:6830361-6830002 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 210

Conread position: 406-754
Cow position: chr9:16175915-16176277 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 50

Conread position: 406-754
Cow position: chr9:30672516-30672872 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 26

Conread position: 406-754
Cow position: chr9:51182046-51181679 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 190

Conread position: 411-754
Cow position: chr9:18509648-18509293 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 35

Conread position: 415-749
Cow position: chr9:5004151-5004482 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 21

Conread position: 416-753
Cow position: chr9:51210834-51211186 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 0

Conread position: 416-754
Cow position: chr9:2487978-2487613 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 248
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 22, 0

Conread position: 416-754
Cow position: chr9:25035693-25035340 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 0

Conread position: 416-754
Cow position: chr9:27934241-27934593 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 0

Conread position: 416-754
Cow position: chr9:28678125-28678478 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 0

Conread position: 416-754
Cow position: chr9:36724654-36725007 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 216

Conread position: 419-746
Cow position: chr9:22653727-22654070 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 0

Conread position: 419-754
Cow position: chr9:31064589-31064938 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 0

Conread position: 420-754
Cow position: chr9:29028037-29027696 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 34

Conread position: 420-754
Cow position: chr9:37162651-37162308 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 294

Conread position: 421-754
Cow position: chr9:45873503-45873851 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 211

Conread position: 422-754
Cow position: chr9:64018303-64017956 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 0

Conread position: 423-754
Cow position: chr9:9013264-9013607 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 146

Conread position: 423-754
Cow position: chr9:42309849-42310193 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 30

Conread position: 423-754
Cow position: chr9:60277856-60277510 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 0

Conread position: 426-754
Cow position: chr9:27034849-27035188 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 36

Conread position: 437-754
Cow position: chr9:1251820-1251492 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 21

Conread position: 437-754
Cow position: chr9:30826856-30827185 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 84

Conread position: 447-754
Cow position: chr9:780620-780299 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 0

Conread position: 447-754
Cow position: chr9:1076013-1075692 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 0

Conread position: 450-754
Cow position: chr9:28439996-28440313 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 181

Conread position: 458-754
Cow position: chr9:17064192-17063882 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 0

Conread position: 469-754
Cow position: chr9:31807782-31808076 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 22

Conread position: 470-754
Cow position: chr9:3543056-3543350 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 0

Conread position: 474-754
Cow position: chr9:50790929-50791217 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 234

Conread position: 496-753
Cow position: chr9:34722153-34722409 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 134, 61

Conread position: 509-746
Cow position: chr9:44795528-44795768 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 192
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 195

Conread position: 551-754
Cow position: chr9:59482503-59482295 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 123
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 83, 69

Conread position: 554-752
Cow position: chr9:828823-828634 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 141
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 60, 0

Conread position: 567-754
Cow position: chr9:3998323-3998517 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 151
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 68, 0

Conread position: 568-754
Cow position: chr9:4943500-4943307 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 154
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 69, 0

Conread position: 640-754
Cow position: chr9:40223676-40223794 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 97
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 75, 0

Conread position: 174-754
Cow position: chrX:29173937-29173350 (view UCSC Genome Browser custom track)
Alignm length: 588
Alignm identity: 112
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 462, 0

Conread position: 323-750
Cow position: chrX:30179023-30178580 (view UCSC Genome Browser custom track)
Alignm length: 449
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 80

Conread position: 324-745
Cow position: chrX:13417445-13417022 (view UCSC Genome Browser custom track)
Alignm length: 436
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 38

Conread position: 325-727
Cow position: chrX:13053001-13053404 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 82

Conread position: 335-754
Cow position: chrX:6282765-6282342 (view UCSC Genome Browser custom track)
Alignm length: 434
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 135

Conread position: 336-754
Cow position: chrX:2482653-2482218 (view UCSC Genome Browser custom track)
Alignm length: 439
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 104

Conread position: 350-728
Cow position: chrX:44387118-44387513 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 263

Conread position: 351-754
Cow position: chrX:2536460-2536035 (view UCSC Genome Browser custom track)
Alignm length: 426
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 0

Conread position: 351-754
Cow position: chrX:20697088-20696688 (view UCSC Genome Browser custom track)
Alignm length: 417
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 10

Conread position: 355-745
Cow position: chrX:17667895-17667493 (view UCSC Genome Browser custom track)
Alignm length: 406
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 338

Conread position: 365-754
Cow position: chrX:18534502-18534881 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 271
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 166, 99

Conread position: 385-750
Cow position: chrX:22610974-22611353 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 0

Conread position: 387-746
Cow position: chrX:29285469-29285844 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 236

Conread position: 390-754
Cow position: chrX:22525576-22525193 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 0

Conread position: 406-746
Cow position: chrX:21829578-21829934 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 50

Conread position: 406-754
Cow position: chrX:16699354-16699718 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 0

Conread position: 406-754
Cow position: chrX:23041069-23040711 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 36

Conread position: 406-754
Cow position: chrX:29794062-29793711 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 130, 48

Conread position: 411-754
Cow position: chrX:29096262-29096619 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 21

Conread position: 415-754
Cow position: chrX:3421128-3420779 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 206

Conread position: 415-754
Cow position: chrX:13413076-13412721 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 0

Conread position: 415-754
Cow position: chrX:24089460-24089813 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 38

Conread position: 416-745
Cow position: chrX:21490256-21490598 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 6

Conread position: 416-746
Cow position: chrX:28634358-28634015 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 258

Conread position: 416-750
Cow position: chrX:2101917-2102265 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 179

Conread position: 416-750
Cow position: chrX:16812537-16812188 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 0

Conread position: 416-750
Cow position: chrX:21304468-21304118 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 0

Conread position: 416-750
Cow position: chrX:28758583-28758226 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 0

Conread position: 416-754
Cow position: chrX:2604106-2604459 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 0

Conread position: 416-754
Cow position: chrX:8479707-8480061 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 0

Conread position: 416-754
Cow position: chrX:14594829-14595182 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 0

Conread position: 416-754
Cow position: chrX:16363066-16362713 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 0

Conread position: 416-754
Cow position: chrX:30055678-30055324 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 0

Conread position: 416-754
Cow position: chrX:32067098-32066751 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 143

Conread position: 416-754
Cow position: chrX:35529920-35530273 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 0

Conread position: 416-754
Cow position: chrX:37849072-37849424 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 256

Conread position: 417-754
Cow position: chrX:6873014-6872662 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 0

Conread position: 417-754
Cow position: chrX:30011098-30011450 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 5

Conread position: 419-754
Cow position: chrX:970834-971186 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 0

Conread position: 419-754
Cow position: chrX:20315993-20315651 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 112

Conread position: 419-754
Cow position: chrX:23019391-23019740 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 274

Conread position: 419-754
Cow position: chrX:29853502-29853154 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 290

Conread position: 419-754
Cow position: chrX:29885050-29885404 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 0

Conread position: 420-754
Cow position: chrX:9125417-9125774 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 255

Conread position: 420-754
Cow position: chrX:26528046-26528389 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 34

Conread position: 421-754
Cow position: chrX:1833889-1834229 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 59

Conread position: 423-754
Cow position: chrX:15127170-15126825 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 0

Conread position: 437-740
Cow position: chrX:31493500-31493817 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 0

Conread position: 437-750
Cow position: chrX:13076617-13076290 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 0

Conread position: 437-750
Cow position: chrX:13097191-13096864 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 0

Conread position: 437-754
Cow position: chrX:2562777-2562446 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 59

Conread position: 437-754
Cow position: chrX:7093678-7094009 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 0

Conread position: 437-754
Cow position: chrX:13398040-13397709 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 0

Conread position: 437-754
Cow position: chrX:26400097-26399770 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 256

Conread position: 437-754
Cow position: chrX:27426240-27425909 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 0

Conread position: 437-754
Cow position: chrX:30173591-30173260 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 60

Conread position: 438-754
Cow position: chrX:10531477-10531147 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 0

Conread position: 445-754
Cow position: chrX:12654672-12654351 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 0

Conread position: 445-754
Cow position: chrX:28585068-28585391 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 0

Conread position: 447-746
Cow position: chrX:11464912-11464599 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 0

Conread position: 447-746
Cow position: chrX:31198538-31198850 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 6

Conread position: 447-753
Cow position: chrX:5394911-5394591 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 155

Conread position: 447-753
Cow position: chrX:7481722-7482042 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 0

Conread position: 447-754
Cow position: chrX:12280180-12279859 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 0

Conread position: 447-754
Cow position: chrX:12343046-12343365 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 141

Conread position: 447-754
Cow position: chrX:12353330-12353651 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 0

Conread position: 447-754
Cow position: chrX:18219487-18219808 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 0

Conread position: 447-754
Cow position: chrX:39563841-39563522 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 254

Conread position: 448-753
Cow position: chrX:8588269-8588588 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 0

Conread position: 448-754
Cow position: chrX:15179340-15179014 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 0

Conread position: 449-746
Cow position: chrX:15980858-15980553 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 273

Conread position: 455-754
Cow position: chrX:29950486-29950170 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 0

Conread position: 458-754
Cow position: chrX:3376011-3375701 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 0

Conread position: 470-754
Cow position: chrX:20720107-20720401 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 0

Conread position: 474-754
Cow position: chrX:9008459-9008749 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 0

Conread position: 474-754
Cow position: chrX:11149196-11148922 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 149

Conread position: 474-754
Cow position: chrX:12288273-12287992 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 205

Conread position: 479-753
Cow position: chrX:22582600-22582327 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 208
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 20, 13

Conread position: 479-754
Cow position: chrX:29911299-29911014 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 0

Conread position: 480-754
Cow position: chrX:21579603-21579879 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 106

Conread position: 485-754
Cow position: chrX:16237915-16238194 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 0

Conread position: 496-754
Cow position: chrX:41851050-41850783 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 206

Conread position: 497-746
Cow position: chrX:30711734-30711993 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 0

Conread position: 498-754
Cow position: chrX:507186-506920 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 0

Conread position: 519-746
Cow position: chrX:34553296-34553531 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 188
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 14, 67

Conread position: 549-750
Cow position: chrX:982861-983069 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 161
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 87, 0

Conread position: 550-754
Cow position: chrX:27987624-27987411 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 157
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 81, 0

Conread position: 554-754
Cow position: chrX:6242448-6242236 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 155
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 78, 72

Conread position: 554-754
Cow position: chrX:31187018-31186813 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 154
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 82, 32

Conread position: 557-754
Cow position: chrX:12182936-12183140 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 155
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 58, 13

Conread position: 562-754
Cow position: chrX:41411396-41411595 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 154
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 74, 0

Conread position: 563-754
Cow position: chrX:16016210-16016015 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 147
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 73, 139

Conread position: 567-754
Cow position: chrX:27624213-27624407 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 152
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 69, 0

Conread position: 578-753
Cow position: chrX:16275878-16276059 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 143
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 58, 122

Conread position: 578-754
Cow position: chrX:15599199-15599377 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 148
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 56, 139

Conread position: 580-753
Cow position: chrX:5283547-5283367 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 146
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 56, 0

Conread position: 590-752
Cow position: chrX:18953528-18953359 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 134
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 46, 29

Conread position: 600-754
Cow position: chrX:24325325-24325168 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 121
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 36, 0

Conread position: 601-753
Cow position: chrX:3084869-3084712 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 121
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 35, 0

Conread position: 615-754
Cow position: chrX:17478160-17478014 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 113
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 21, 0