Cow genome map
| Conread name: | Lng1-LNG010035D07 |
| Conread position: | 254-623 |
| Cow position: | chr1:86473008-86472630 (view UCSC Genome Browser custom track) |
| Alignm length: | 385 |
| Alignm identity: | 252 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 69, 50 |
| Conread position: | 259-554 |
| Cow position: | chr1:82289176-82288869 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 199 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 599-792 |
| Cow position: | chr1:95516558-95516753 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 145 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 47, 21 |
| Conread position: | 340-807 |
| Cow position: | chr10:27051235-27051708 (view UCSC Genome Browser custom track) |
| Alignm length: | 481 |
| Alignm identity: | 290 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 18, 159 |
| Conread position: | 603-810 |
| Cow position: | chr10:23998191-23998401 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 146 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 21, 27 |
| Conread position: | 340-805 |
| Cow position: | chr12:18072814-18072362 (view UCSC Genome Browser custom track) |
| Alignm length: | 477 |
| Alignm identity: | 307 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 56, 87 |
| Conread position: | 375-808 |
| Cow position: | chr13:40452097-40452535 (view UCSC Genome Browser custom track) |
| Alignm length: | 446 |
| Alignm identity: | 272 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 21, 75 |
| Conread position: | 252-442 |
| Cow position: | chr15:23575069-23575260 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 141 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 56, 37 |
| Conread position: | 334-737 |
| Cow position: | chr16:55721762-55722170 (view UCSC Genome Browser custom track) |
| Alignm length: | 415 |
| Alignm identity: | 260 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 42, 90 |
| Conread position: | 340-799 |
| Cow position: | chr17:31271546-31272007 (view UCSC Genome Browser custom track) |
| Alignm length: | 472 |
| Alignm identity: | 293 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 53, 38 |
| Conread position: | 601-805 |
| Cow position: | chr17:20263089-20262880 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 148 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 13, 105 |
| Conread position: | 252-719 |
| Cow position: | chr18:53700763-53700293 (view UCSC Genome Browser custom track) |
| Alignm length: | 489 |
| Alignm identity: | 316 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 55, 343 |
| Conread position: | 597-805 |
| Cow position: | chr18:22230577-22230370 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 140 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 168, 104 |
| Conread position: | 249-655 |
| Cow position: | chr19:32434257-32433846 (view UCSC Genome Browser custom track) |
| Alignm length: | 418 |
| Alignm identity: | 331 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 144, 54 |
| Conread position: | 649-844 |
| Cow position: | chr19:32433658-32433458 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 163 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 9, 101 |
| Conread position: | 249-761 |
| Cow position: | chr2:35255943-35255417 (view UCSC Genome Browser custom track) |
| Alignm length: | 533 |
| Alignm identity: | 325 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 42, 127 |
| Conread position: | 361-805 |
| Cow position: | chr2:65556541-65556088 (view UCSC Genome Browser custom track) |
| Alignm length: | 461 |
| Alignm identity: | 289 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 15, 116 |
| Conread position: | 411-806 |
| Cow position: | chr2:59030089-59029693 (view UCSC Genome Browser custom track) |
| Alignm length: | 408 |
| Alignm identity: | 257 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 126, 170 |
| Conread position: | 357-689 |
| Cow position: | chr20:18364713-18364384 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 226 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 22, 199 |
| Conread position: | 396-818 |
| Cow position: | chr21:25477075-25476663 (view UCSC Genome Browser custom track) |
| Alignm length: | 432 |
| Alignm identity: | 275 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 59, 85 |
| Conread position: | 415-804 |
| Cow position: | chr21:18060787-18061178 (view UCSC Genome Browser custom track) |
| Alignm length: | 403 |
| Alignm identity: | 259 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 17, 81 |
| Conread position: | 363-795 |
| Cow position: | chr22:33594135-33594590 (view UCSC Genome Browser custom track) |
| Alignm length: | 459 |
| Alignm identity: | 293 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 30, 167 |
| Conread position: | 322-560 |
| Cow position: | chr23:13690354-13690593 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 159 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 69, 13 |
| Conread position: | 341-806 |
| Cow position: | chr23:5885300-5884855 (view UCSC Genome Browser custom track) |
| Alignm length: | 474 |
| Alignm identity: | 310 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 92, 38 |
| Conread position: | 350-798 |
| Cow position: | chr25:11515085-11515554 (view UCSC Genome Browser custom track) |
| Alignm length: | 476 |
| Alignm identity: | 304 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 8, 164 |
| Conread position: | 585-796 |
| Cow position: | chr25:5266983-5266772 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 148 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 136, 31 |
| Conread position: | 602-806 |
| Cow position: | chr26:18698512-18698718 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 149 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 22, 104 |
| Conread position: | 340-617 |
| Cow position: | chr28:14627738-14627461 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 189 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 52, 131 |
| Conread position: | 342-792 |
| Cow position: | chr28:14226468-14226922 (view UCSC Genome Browser custom track) |
| Alignm length: | 465 |
| Alignm identity: | 294 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 35, 79 |
| Conread position: | 338-797 |
| Cow position: | chr29:17975214-17975689 (view UCSC Genome Browser custom track) |
| Alignm length: | 485 |
| Alignm identity: | 312 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 16, 47 |
| Conread position: | 445-737 |
| Cow position: | chr29:34151320-34151025 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 203 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 113, 7 |
| Conread position: | 249-763 |
| Cow position: | chr3:18786853-18786349 (view UCSC Genome Browser custom track) |
| Alignm length: | 528 |
| Alignm identity: | 339 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 63, 88 |
| Conread position: | 252-625 |
| Cow position: | chr3:39634118-39633737 (view UCSC Genome Browser custom track) |
| Alignm length: | 387 |
| Alignm identity: | 244 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 67, 55 |
| Conread position: | 310-805 |
| Cow position: | chr3:32815517-32815018 (view UCSC Genome Browser custom track) |
| Alignm length: | 515 |
| Alignm identity: | 330 |
| Alignm E-value: | 8e-33 |
| Alignm gaps (pig, cow): | 52, 30 |
| Conread position: | 340-790 |
| Cow position: | chr3:66646723-66647171 (view UCSC Genome Browser custom track) |
| Alignm length: | 464 |
| Alignm identity: | 298 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 36, 100 |
| Conread position: | 351-779 |
| Cow position: | chr3:51855416-51855848 (view UCSC Genome Browser custom track) |
| Alignm length: | 446 |
| Alignm identity: | 281 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 85, 22 |
| Conread position: | 396-693 |
| Cow position: | chr3:43257519-43257811 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 190 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 161, 54 |
| Conread position: | 407-801 |
| Cow position: | chr3:75987727-75987348 (view UCSC Genome Browser custom track) |
| Alignm length: | 403 |
| Alignm identity: | 281 |
| Alignm E-value: | 5.99994e-41 |
| Alignm gaps (pig, cow): | 45, 60 |
| Conread position: | 426-792 |
| Cow position: | chr3:79785952-79785573 (view UCSC Genome Browser custom track) |
| Alignm length: | 384 |
| Alignm identity: | 262 |
| Alignm E-value: | 5e-40 |
| Alignm gaps (pig, cow): | 7, 38 |
| Conread position: | 399-798 |
| Cow position: | chr4:36738414-36738026 (view UCSC Genome Browser custom track) |
| Alignm length: | 406 |
| Alignm identity: | 258 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 159, 23 |
| Conread position: | 322-814 |
| Cow position: | chr5:14071373-14071854 (view UCSC Genome Browser custom track) |
| Alignm length: | 502 |
| Alignm identity: | 319 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 40, 18 |
| Conread position: | 311-556 |
| Cow position: | chr6:52048069-52048313 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 172 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 5, 23 |
| Conread position: | 340-548 |
| Cow position: | chrX:27600352-27600141 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 150 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 40, 46 |
| Conread position: | 405-790 |
| Cow position: | chrX:1528930-1528540 (view UCSC Genome Browser custom track) |
| Alignm length: | 399 |
| Alignm identity: | 263 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 59, 89 |