Cow genome map
| Conread name: | Lng1-LNG010046H11 |
| Conread position: | 73-742 |
| Cow position: | chr1:98864915-98864214 (view UCSC Genome Browser custom track) |
| Alignm length: | 705 |
| Alignm identity: | 485 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 83, 40 |
| Conread position: | 86-484 |
| Cow position: | chr1:31422028-31421653 (view UCSC Genome Browser custom track) |
| Alignm length: | 406 |
| Alignm identity: | 288 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 70, 12 |
| Conread position: | 86-616 |
| Cow position: | chr1:38396480-38396962 (view UCSC Genome Browser custom track) |
| Alignm length: | 533 |
| Alignm identity: | 381 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 112, 71 |
| Conread position: | 73-833 |
| Cow position: | chr10:24977878-24977133 (view UCSC Genome Browser custom track) |
| Alignm length: | 767 |
| Alignm identity: | 587 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 112, 188 |
| Conread position: | 73-840 |
| Cow position: | chr10:11820592-11821406 (view UCSC Genome Browser custom track) |
| Alignm length: | 820 |
| Alignm identity: | 542 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 83, 146 |
| Conread position: | 73-843 |
| Cow position: | chr10:64302882-64302126 (view UCSC Genome Browser custom track) |
| Alignm length: | 783 |
| Alignm identity: | 568 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 68, 177 |
| Conread position: | 267-420 |
| Cow position: | chr10:21076840-21076983 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 120 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 58, 27 |
| Conread position: | 73-435 |
| Cow position: | chr11:13162849-13163200 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 267 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 142, 77 |
| Conread position: | 73-621 |
| Cow position: | chr11:36761983-36762525 (view UCSC Genome Browser custom track) |
| Alignm length: | 562 |
| Alignm identity: | 383 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 84, 59 |
| Conread position: | 73-677 |
| Cow position: | chr11:13067155-13066571 (view UCSC Genome Browser custom track) |
| Alignm length: | 613 |
| Alignm identity: | 452 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 142, 62 |
| Conread position: | 82-523 |
| Cow position: | chr11:44231022-44231458 (view UCSC Genome Browser custom track) |
| Alignm length: | 453 |
| Alignm identity: | 306 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 74, 9 |
| Conread position: | 91-212 |
| Cow position: | chr11:9415226-9415101 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 100 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 263-663 |
| Cow position: | chr11:36713411-36713018 (view UCSC Genome Browser custom track) |
| Alignm length: | 406 |
| Alignm identity: | 293 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 32 |
| Conread position: | 89-252 |
| Cow position: | chr13:43850180-43850012 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 123 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 67, 0 |
| Conread position: | 226-420 |
| Cow position: | chr13:30261855-30262049 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 150 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 10, 32 |
| Conread position: | 267-842 |
| Cow position: | chr13:22185457-22184896 (view UCSC Genome Browser custom track) |
| Alignm length: | 592 |
| Alignm identity: | 430 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 261, 34 |
| Conread position: | 73-839 |
| Cow position: | chr14:38816369-38815586 (view UCSC Genome Browser custom track) |
| Alignm length: | 798 |
| Alignm identity: | 552 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 83, 150 |
| Conread position: | 73-840 |
| Cow position: | chr14:30706850-30706067 (view UCSC Genome Browser custom track) |
| Alignm length: | 796 |
| Alignm identity: | 550 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 83, 179 |
| Conread position: | 84-840 |
| Cow position: | chr14:34044181-34043446 (view UCSC Genome Browser custom track) |
| Alignm length: | 773 |
| Alignm identity: | 528 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 72, 107 |
| Conread position: | 70-228 |
| Cow position: | chr15:32672722-32672883 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 122 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 78, 148 |
| Conread position: | 83-843 |
| Cow position: | chr15:30810477-30811214 (view UCSC Genome Browser custom track) |
| Alignm length: | 769 |
| Alignm identity: | 561 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 132 |
| Conread position: | 581-843 |
| Cow position: | chr15:3888835-3889100 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 189 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 220, 23 |
| Conread position: | 86-419 |
| Cow position: | chr16:24154936-24154608 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 236 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 70, 111 |
| Conread position: | 86-834 |
| Cow position: | chr16:28438279-28437517 (view UCSC Genome Browser custom track) |
| Alignm length: | 782 |
| Alignm identity: | 535 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 99 |
| Conread position: | 86-426 |
| Cow position: | chr18:9186480-9186159 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 244 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 70, 17 |
| Conread position: | 86-545 |
| Cow position: | chr18:4885284-4884836 (view UCSC Genome Browser custom track) |
| Alignm length: | 467 |
| Alignm identity: | 342 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 70, 140 |
| Conread position: | 73-817 |
| Cow position: | chr2:63977638-63978390 (view UCSC Genome Browser custom track) |
| Alignm length: | 764 |
| Alignm identity: | 545 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 83, 189 |
| Conread position: | 73-821 |
| Cow position: | chr2:45968631-45967868 (view UCSC Genome Browser custom track) |
| Alignm length: | 780 |
| Alignm identity: | 548 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 31 |
| Conread position: | 79-401 |
| Cow position: | chr2:45921529-45921213 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 230 |
| Alignm E-value: | 6e-40 |
| Alignm gaps (pig, cow): | 30, 12 |
| Conread position: | 91-632 |
| Cow position: | chr2:77208387-77208951 (view UCSC Genome Browser custom track) |
| Alignm length: | 571 |
| Alignm identity: | 378 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 65, 29 |
| Conread position: | 86-377 |
| Cow position: | chr21:25974629-25974909 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 200 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 81, 64 |
| Conread position: | 273-648 |
| Cow position: | chr21:37292743-37293118 (view UCSC Genome Browser custom track) |
| Alignm length: | 385 |
| Alignm identity: | 279 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 255, 21 |
| Conread position: | 91-843 |
| Cow position: | chr22:36580979-36580238 (view UCSC Genome Browser custom track) |
| Alignm length: | 769 |
| Alignm identity: | 573 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 165 |
| Conread position: | 185-597 |
| Cow position: | chr22:36591521-36591119 (view UCSC Genome Browser custom track) |
| Alignm length: | 425 |
| Alignm identity: | 308 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 75 |
| Conread position: | 186-622 |
| Cow position: | chr22:298017-297594 (view UCSC Genome Browser custom track) |
| Alignm length: | 439 |
| Alignm identity: | 296 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 151, 66 |
| Conread position: | 267-597 |
| Cow position: | chr22:292479-292141 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 260 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 194, 27 |
| Conread position: | 86-840 |
| Cow position: | chr23:26836475-26837220 (view UCSC Genome Browser custom track) |
| Alignm length: | 771 |
| Alignm identity: | 565 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 104, 27 |
| Conread position: | 80-549 |
| Cow position: | chr24:14873071-14872633 (view UCSC Genome Browser custom track) |
| Alignm length: | 473 |
| Alignm identity: | 334 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 65 |
| Conread position: | 286-842 |
| Cow position: | chr24:6048684-6049228 (view UCSC Genome Browser custom track) |
| Alignm length: | 573 |
| Alignm identity: | 407 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 94, 8 |
| Conread position: | 191-834 |
| Cow position: | chr25:3378376-3377753 (view UCSC Genome Browser custom track) |
| Alignm length: | 660 |
| Alignm identity: | 455 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 314, 29 |
| Conread position: | 89-663 |
| Cow position: | chr28:29437013-29436431 (view UCSC Genome Browser custom track) |
| Alignm length: | 600 |
| Alignm identity: | 416 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 96 |
| Conread position: | 177-841 |
| Cow position: | chr28:10230279-10229609 (view UCSC Genome Browser custom track) |
| Alignm length: | 688 |
| Alignm identity: | 499 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 83 |
| Conread position: | 73-843 |
| Cow position: | chr29:16016955-16016201 (view UCSC Genome Browser custom track) |
| Alignm length: | 790 |
| Alignm identity: | 574 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 83, 59 |
| Conread position: | 73-843 |
| Cow position: | chr3:21305066-21304301 (view UCSC Genome Browser custom track) |
| Alignm length: | 797 |
| Alignm identity: | 561 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 83, 49 |
| Conread position: | 90-410 |
| Cow position: | chr3:49601814-49601512 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 228 |
| Alignm E-value: | 9e-34 |
| Alignm gaps (pig, cow): | 65, 149 |
| Conread position: | 73-841 |
| Cow position: | chr4:1496838-1496097 (view UCSC Genome Browser custom track) |
| Alignm length: | 777 |
| Alignm identity: | 567 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 86, 74 |
| Conread position: | 113-843 |
| Cow position: | chr4:4176384-4177091 (view UCSC Genome Browser custom track) |
| Alignm length: | 746 |
| Alignm identity: | 557 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 15 |
| Conread position: | 186-488 |
| Cow position: | chr4:32622025-32622309 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 218 |
| Alignm E-value: | 4.99997e-41 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 339-843 |
| Cow position: | chr4:19251386-19251849 (view UCSC Genome Browser custom track) |
| Alignm length: | 506 |
| Alignm identity: | 385 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 211, 12 |
| Conread position: | 88-597 |
| Cow position: | chr6:53741042-53741544 (view UCSC Genome Browser custom track) |
| Alignm length: | 523 |
| Alignm identity: | 327 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 41, 34 |
| Conread position: | 117-342 |
| Cow position: | chr6:34025219-34025440 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 164 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 39, 102 |
| Conread position: | 263-843 |
| Cow position: | chr6:31637580-31637028 (view UCSC Genome Browser custom track) |
| Alignm length: | 587 |
| Alignm identity: | 421 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 240, 31 |
| Conread position: | 82-808 |
| Cow position: | chr7:30302483-30303172 (view UCSC Genome Browser custom track) |
| Alignm length: | 728 |
| Alignm identity: | 521 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 135, 9 |
| Conread position: | 86-843 |
| Cow position: | chr7:26851557-26852292 (view UCSC Genome Browser custom track) |
| Alignm length: | 768 |
| Alignm identity: | 558 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 70, 12 |
| Conread position: | 87-331 |
| Cow position: | chr7:30119295-30119063 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 180 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 69, 131 |
| Conread position: | 296-700 |
| Cow position: | chr7:19048467-19048065 (view UCSC Genome Browser custom track) |
| Alignm length: | 419 |
| Alignm identity: | 298 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 207, 38 |
| Conread position: | 703-840 |
| Cow position: | chr7:19047936-19047796 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 110 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 87-571 |
| Cow position: | chr8:16084801-16085269 (view UCSC Genome Browser custom track) |
| Alignm length: | 492 |
| Alignm identity: | 341 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 69, 136 |
| Conread position: | 101-396 |
| Cow position: | chr8:51328037-51328323 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 214 |
| Alignm E-value: | 9e-37 |
| Alignm gaps (pig, cow): | 84, 39 |
| Conread position: | 73-596 |
| Cow position: | chr9:3726364-3726896 (view UCSC Genome Browser custom track) |
| Alignm length: | 543 |
| Alignm identity: | 376 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 112 |
| Conread position: | 73-843 |
| Cow position: | chr9:3393902-3393148 (view UCSC Genome Browser custom track) |
| Alignm length: | 783 |
| Alignm identity: | 569 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 449, 47 |
| Conread position: | 82-835 |
| Cow position: | chr9:29328378-29329115 (view UCSC Genome Browser custom track) |
| Alignm length: | 774 |
| Alignm identity: | 549 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 74, 136 |
| Conread position: | 186-551 |
| Cow position: | chr9:64159341-64159696 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 254 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 316, 66 |
| Conread position: | 99-840 |
| Cow position: | chrX:26428029-26427280 (view UCSC Genome Browser custom track) |
| Alignm length: | 767 |
| Alignm identity: | 505 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 65, 205 |
| Conread position: | 139-379 |
| Cow position: | chrX:6251193-6250967 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 167 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 51, 28 |
| Conread position: | 267-843 |
| Cow position: | chrX:10417512-10416925 (view UCSC Genome Browser custom track) |
| Alignm length: | 600 |
| Alignm identity: | 441 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 212, 25 |