Cow genome map
| Conread name: | Lng1-LNG010090C02 |
| Conread position: | 85-387 |
| Cow position: | chr1:72086362-72086656 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 207 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 166, 42 |
| Conread position: | 132-387 |
| Cow position: | chr1:24654647-24654895 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 177 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 122, 55 |
| Conread position: | 147-326 |
| Cow position: | chr1:88393746-88393574 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 129 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 101, 31 |
| Conread position: | 118-397 |
| Cow position: | chr10:1003900-1004164 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 195 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 138, 60 |
| Conread position: | 132-387 |
| Cow position: | chr10:32281849-32282100 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 186 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 127, 46 |
| Conread position: | 197-646 |
| Cow position: | chr10:33687958-33687510 (view UCSC Genome Browser custom track) |
| Alignm length: | 451 |
| Alignm identity: | 358 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 250, 161 |
| Conread position: | 122-329 |
| Cow position: | chr11:15994617-15994839 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 164 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 12, 7 |
| Conread position: | 158-373 |
| Cow position: | chr11:56479429-56479216 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 158 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 135, 20 |
| Conread position: | 85-387 |
| Cow position: | chr12:28764289-28763993 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 213 |
| Alignm E-value: | 7e-40 |
| Alignm gaps (pig, cow): | 174, 42 |
| Conread position: | 117-395 |
| Cow position: | chr12:6078374-6078080 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 205 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 41, 121 |
| Conread position: | 132-389 |
| Cow position: | chr13:43383050-43383299 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 186 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 118, 46 |
| Conread position: | 135-381 |
| Cow position: | chr13:33333801-33333561 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 170 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 116, 43 |
| Conread position: | 148-397 |
| Cow position: | chr13:11169574-11169336 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 190 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 88, 9 |
| Conread position: | 157-387 |
| Cow position: | chr14:13619990-13619765 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 173 |
| Alignm E-value: | 6e-38 |
| Alignm gaps (pig, cow): | 102, 31 |
| Conread position: | 132-389 |
| Cow position: | chr15:23275153-23274901 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 192 |
| Alignm E-value: | 6e-38 |
| Alignm gaps (pig, cow): | 12, 28 |
| Conread position: | 135-397 |
| Cow position: | chr15:2670872-2670601 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 190 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 39, 22 |
| Conread position: | 136-397 |
| Cow position: | chr15:13682762-13683018 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 195 |
| Alignm E-value: | 4.06377e-44 |
| Alignm gaps (pig, cow): | 123, 42 |
| Conread position: | 148-396 |
| Cow position: | chr15:22154080-22154318 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 180 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 72, 9 |
| Conread position: | 132-397 |
| Cow position: | chr16:25455388-25455127 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 189 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 127, 46 |
| Conread position: | 137-397 |
| Cow position: | chr16:25443956-25444212 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 190 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 122, 41 |
| Conread position: | 117-395 |
| Cow position: | chr17:17382698-17382977 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 201 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 133, 70 |
| Conread position: | 132-313 |
| Cow position: | chr17:760410-760587 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 133 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 127, 55 |
| Conread position: | 132-397 |
| Cow position: | chr17:14029718-14029451 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 188 |
| Alignm E-value: | 6e-39 |
| Alignm gaps (pig, cow): | 123, 61 |
| Conread position: | 135-387 |
| Cow position: | chr17:22107000-22106751 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 185 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 124, 43 |
| Conread position: | 135-387 |
| Cow position: | chr19:7490966-7491211 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 181 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 118, 43 |
| Conread position: | 156-377 |
| Cow position: | chr2:71470306-71470087 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 180 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 97, 38 |
| Conread position: | 85-387 |
| Cow position: | chr20:28724539-28724832 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 206 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 176, 42 |
| Conread position: | 132-397 |
| Cow position: | chr20:2653955-2654214 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 192 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 12, 26 |
| Conread position: | 135-387 |
| Cow position: | chr20:7598028-7597781 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 183 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 124, 43 |
| Conread position: | 135-387 |
| Cow position: | chr20:23805048-23804804 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 179 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 126, 43 |
| Conread position: | 133-387 |
| Cow position: | chr22:3806380-3806636 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 193 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 24, 50 |
| Conread position: | 135-387 |
| Cow position: | chr23:5871801-5871557 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 189 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 126, 52 |
| Conread position: | 159-397 |
| Cow position: | chr23:38301951-38301720 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 179 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 96, 17 |
| Conread position: | 135-387 |
| Cow position: | chr24:12332855-12332613 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 174 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 115, 43 |
| Conread position: | 135-387 |
| Cow position: | chr24:17405979-17406225 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 174 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 19, 25 |
| Conread position: | 148-387 |
| Cow position: | chr24:18267626-18267392 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 179 |
| Alignm E-value: | 6e-39 |
| Alignm gaps (pig, cow): | 111, 30 |
| Conread position: | 135-397 |
| Cow position: | chr25:20633316-20633573 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 188 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 124, 51 |
| Conread position: | 134-368 |
| Cow position: | chr27:15273314-15273084 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 173 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 125, 53 |
| Conread position: | 136-387 |
| Cow position: | chr28:25761704-25761941 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 177 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 122, 50 |
| Conread position: | 157-397 |
| Cow position: | chr28:11544654-11544417 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 173 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 91, 21 |
| Conread position: | 135-394 |
| Cow position: | chr29:29600401-29600145 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 185 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 123, 41 |
| Conread position: | 118-389 |
| Cow position: | chr3:49453668-49453935 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 202 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 12, 73 |
| Conread position: | 135-389 |
| Cow position: | chr3:19946912-19947163 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 187 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 117, 42 |
| Conread position: | 136-387 |
| Cow position: | chr3:63000669-63000420 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 181 |
| Alignm E-value: | 9e-37 |
| Alignm gaps (pig, cow): | 123, 53 |
| Conread position: | 158-397 |
| Cow position: | chr3:42994170-42993922 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 175 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 137-387 |
| Cow position: | chr4:358382-358628 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 182 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 122, 41 |
| Conread position: | 122-397 |
| Cow position: | chr5:41980054-41980327 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 190 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 139, 67 |
| Conread position: | 135-389 |
| Cow position: | chr5:60551-60301 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 181 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 119, 53 |
| Conread position: | 135-396 |
| Cow position: | chr6:67098043-67098302 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 182 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 121, 138 |
| Conread position: | 137-387 |
| Cow position: | chr6:34504785-34504539 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 183 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 87, 41 |
| Conread position: | 152-353 |
| Cow position: | chr6:39435164-39434968 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 152 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 107, 26 |
| Conread position: | 135-387 |
| Cow position: | chr7:59774138-59774386 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 181 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 89, 43 |
| Conread position: | 135-397 |
| Cow position: | chr9:3545492-3545748 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 191 |
| Alignm E-value: | 6e-36 |
| Alignm gaps (pig, cow): | 17, 23 |
| Conread position: | 157-364 |
| Cow position: | chr9:31061405-31061607 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 154 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 98, 36 |
| Conread position: | 137-387 |
| Cow position: | chrX:16854791-16854546 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 182 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 122, 41 |