Cow genome map
| Conread name: | Lng1-LNG010094D06 |
| Conread position: | 328-705 |
| Cow position: | chr1:21279397-21279016 (view UCSC Genome Browser custom track) |
| Alignm length: | 392 |
| Alignm identity: | 258 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 143, 18 |
| Conread position: | 389-697 |
| Cow position: | chr1:45885282-45884982 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 205 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 116, 11 |
| Conread position: | 410-705 |
| Cow position: | chr1:97084386-97084690 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 203 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 23, 150 |
| Conread position: | 270-622 |
| Cow position: | chr11:10345280-10345624 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 291 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 395-705 |
| Cow position: | chr11:75422917-75423221 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 212 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 75, 65 |
| Conread position: | 409-705 |
| Cow position: | chr11:75431486-75431776 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 203 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 61, 51 |
| Conread position: | 425-705 |
| Cow position: | chr11:47981322-47981612 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 201 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 64, 0 |
| Conread position: | 427-705 |
| Cow position: | chr11:56290031-56289749 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 208 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 62, 129 |
| Conread position: | 313-708 |
| Cow position: | chr13:38703937-38703541 (view UCSC Genome Browser custom track) |
| Alignm length: | 406 |
| Alignm identity: | 272 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 17, 46 |
| Conread position: | 431-705 |
| Cow position: | chr14:39437112-39437387 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 200 |
| Alignm E-value: | 7e-38 |
| Alignm gaps (pig, cow): | 47, 155 |
| Conread position: | 387-564 |
| Cow position: | chr15:41896517-41896701 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 133 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 53, 0 |
| Conread position: | 409-701 |
| Cow position: | chr15:22783110-22782805 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 213 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 80, 72 |
| Conread position: | 385-705 |
| Cow position: | chr16:44923388-44923052 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 225 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 101, 53 |
| Conread position: | 394-571 |
| Cow position: | chr16:12290159-12290340 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 129 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 71, 0 |
| Conread position: | 409-588 |
| Cow position: | chr16:54484467-54484279 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 140 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 280-685 |
| Cow position: | chr18:30380905-30381320 (view UCSC Genome Browser custom track) |
| Alignm length: | 428 |
| Alignm identity: | 277 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 13, 79 |
| Conread position: | 398-669 |
| Cow position: | chr18:23048772-23049052 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 195 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 91, 173 |
| Conread position: | 391-592 |
| Cow position: | chr19:8839057-8838855 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 148 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 104, 49 |
| Conread position: | 409-705 |
| Cow position: | chr2:56549019-56549336 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 228 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 76, 13 |
| Conread position: | 362-682 |
| Cow position: | chr20:14961640-14961304 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 230 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 30, 102 |
| Conread position: | 381-684 |
| Cow position: | chr20:8503605-8503913 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 214 |
| Alignm E-value: | 9e-32 |
| Alignm gaps (pig, cow): | 106, 44 |
| Conread position: | 387-657 |
| Cow position: | chr20:14287375-14287662 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 202 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 102, 153 |
| Conread position: | 391-705 |
| Cow position: | chr20:6204195-6203866 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 245 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 96, 35 |
| Conread position: | 418-705 |
| Cow position: | chr21:21655589-21655288 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 211 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 68, 250 |
| Conread position: | 346-695 |
| Cow position: | chr23:36603514-36603892 (view UCSC Genome Browser custom track) |
| Alignm length: | 383 |
| Alignm identity: | 261 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 37, 14 |
| Conread position: | 391-701 |
| Cow position: | chr26:20354018-20353693 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 225 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 94, 64 |
| Conread position: | 289-503 |
| Cow position: | chr27:11972311-11972518 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 152 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 42, 11 |
| Conread position: | 392-708 |
| Cow position: | chr28:24088856-24088515 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 232 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 42, 281 |
| Conread position: | 408-705 |
| Cow position: | chr29:26159875-26160189 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 226 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 81, 87 |
| Conread position: | 394-708 |
| Cow position: | chr3:19029068-19029391 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 221 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 93, 196 |
| Conread position: | 397-653 |
| Cow position: | chr3:1935745-1936019 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 188 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 90, 84 |
| Conread position: | 381-701 |
| Cow position: | chr4:49159872-49160205 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 230 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 42, 63 |
| Conread position: | 388-651 |
| Cow position: | chr4:49423630-49423904 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 191 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 50, 125 |
| Conread position: | 389-687 |
| Cow position: | chr5:66846227-66845905 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 228 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 43, 34 |
| Conread position: | 394-588 |
| Cow position: | chr5:35434458-35434654 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 143 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 95, 45 |
| Conread position: | 388-677 |
| Cow position: | chr6:61660867-61660556 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 212 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 391-668 |
| Cow position: | chr6:8626751-8627037 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 194 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 41, 237 |
| Conread position: | 394-636 |
| Cow position: | chr6:67221402-67221652 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 175 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 95, 82 |
| Conread position: | 409-699 |
| Cow position: | chr6:3058539-3058233 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 208 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 80, 0 |
| Conread position: | 409-705 |
| Cow position: | chr7:60759268-60759574 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 212 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 80, 150 |
| Conread position: | 394-708 |
| Cow position: | chr9:38456994-38457324 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 226 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 95, 64 |
| Conread position: | 284-739 |
| Cow position: | chrX:42339759-42339299 (view UCSC Genome Browser custom track) |
| Alignm length: | 477 |
| Alignm identity: | 305 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 76, 28 |
| Conread position: | 410-588 |
| Cow position: | chrX:23446243-23446430 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 136 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 410-739 |
| Cow position: | chrX:20498806-20498467 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 230 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 16, 283 |
| Conread position: | 411-702 |
| Cow position: | chrX:9278290-9277994 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 208 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 78, 26 |