Non-Coding RNA Search

Cow genome map


           Conread name:
           Lng1-LNG010094E02
        

               Conread position:
               1-105
               

               Cow position:
               chr1:89083028-89082921 (view UCSC Genome Browser custom track)
               

               Alignm length:
               108
               

               Alignm identity:
               91
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               70, 0
               

               Conread position:
               1-140
               

               Cow position:
               chr1:26702289-26702429 (view UCSC Genome Browser custom track)
               

               Alignm length:
               141
               

               Alignm identity:
               110
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               44, 0
               

               Conread position:
               1-140
               

               Cow position:
               chr1:52956171-52956038 (view UCSC Genome Browser custom track)
               

               Alignm length:
               140
               

               Alignm identity:
               115
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               55, 0
               

               Conread position:
               1-145
               

               Cow position:
               chr1:20288036-20287888 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               114
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               78, 0
               

               Conread position:
               1-148
               

               Cow position:
               chr1:68951545-68951402 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               112
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               76, 0
               

               Conread position:
               1-170
               

               Cow position:
               chr1:98708358-98708192 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               132
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               62, 0
               

               Conread position:
               1-171
               

               Cow position:
               chr1:99642448-99642621 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               132
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               69, 144
               

               Conread position:
               1-172
               

               Cow position:
               chr1:10778484-10778322 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               135
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               58, 0
               

               Conread position:
               1-176
               

               Cow position:
               chr1:97806706-97806536 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               137
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               106, 0
               

               Conread position:
               1-184
               

               Cow position:
               chr1:19545181-19545359 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               151
               

               Alignm E-value:
               4.99997e-41
               

               Alignm gaps (pig, cow):
               70, 144
               

               Conread position:
               1-210
               

               Cow position:
               chr1:69678404-69678613 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               160
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               74, 147
               

               Conread position:
               4-149
               

               Cow position:
               chr1:4293970-4293832 (view UCSC Genome Browser custom track)
               

               Alignm length:
               146
               

               Alignm identity:
               115
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               40, 0
               

               Conread position:
               4-176
               

               Cow position:
               chr1:56229166-56228998 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               137
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               55, 0
               

               Conread position:
               5-160
               

               Cow position:
               chr1:70434917-70434752 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               133
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               70, 0
               

               Conread position:
               5-177
               

               Cow position:
               chr1:47008945-47008770 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               132
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               54, 0
               

               Conread position:
               1-125
               

               Cow position:
               chr10:25882310-25882189 (view UCSC Genome Browser custom track)
               

               Alignm length:
               125
               

               Alignm identity:
               100
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               37, 0
               

               Conread position:
               1-133
               

               Cow position:
               chr10:64041972-64041838 (view UCSC Genome Browser custom track)
               

               Alignm length:
               137
               

               Alignm identity:
               110
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               67, 45
               

               Conread position:
               1-155
               

               Cow position:
               chr10:35715821-35715976 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               131
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               70, 145
               

               Conread position:
               1-156
               

               Cow position:
               chr10:24732201-24732043 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               130
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               63, 147
               

               Conread position:
               1-160
               

               Cow position:
               chr10:48377753-48377917 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               133
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               62, 0
               

               Conread position:
               1-172
               

               Cow position:
               chr10:39110116-39110278 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               132
               

               Alignm E-value:
               9e-29
               

               Alignm gaps (pig, cow):
               58, 0
               

               Conread position:
               1-173
               

               Cow position:
               chr10:53357786-53357613 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               136
               

               Alignm E-value:
               9e-29
               

               Alignm gaps (pig, cow):
               58, 37
               

               Conread position:
               1-173
               

               Cow position:
               chr10:54848664-54848494 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               140
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               136, 102
               

               Conread position:
               1-191
               

               Cow position:
               chr10:12315044-12314864 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               151
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               161, 61
               

               Conread position:
               1-199
               

               Cow position:
               chr10:23936372-23936173 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               156
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               70, 145
               

               Conread position:
               3-172
               

               Cow position:
               chr10:41255869-41255705 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               126
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               76, 0
               

               Conread position:
               5-133
               

               Cow position:
               chr10:38513058-38512929 (view UCSC Genome Browser custom track)
               

               Alignm length:
               130
               

               Alignm identity:
               106
               

               Alignm E-value:
               9e-29
               

               Alignm gaps (pig, cow):
               66, 0
               

               Conread position:
               5-176
               

               Cow position:
               chr10:52152406-52152236 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               138
               

               Alignm E-value:
               7e-37
               

               Alignm gaps (pig, cow):
               24, 41
               

               Conread position:
               1-112
               

               Cow position:
               chr11:83033804-83033919 (view UCSC Genome Browser custom track)
               

               Alignm length:
               116
               

               Alignm identity:
               93
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               62, 0
               

               Conread position:
               1-157
               

               Cow position:
               chr11:36647257-36647098 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               133
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               73, 147
               

               Conread position:
               1-169
               

               Cow position:
               chr11:52380980-52381145 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               130
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               54, 0
               

               Conread position:
               1-172
               

               Cow position:
               chr11:3282945-3282781 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               138
               

               Alignm E-value:
               6e-34
               

               Alignm gaps (pig, cow):
               68, 124
               

               Conread position:
               1-172
               

               Cow position:
               chr11:4207206-4207021 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               141
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               86, 0
               

               Conread position:
               1-172
               

               Cow position:
               chr11:17321554-17321384 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               135
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               62, 147
               

               Conread position:
               1-172
               

               Cow position:
               chr11:18388968-18389134 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               132
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               49, 127
               

               Conread position:
               1-172
               

               Cow position:
               chr11:83066388-83066218 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               138
               

               Alignm E-value:
               8e-37
               

               Alignm gaps (pig, cow):
               58, 82
               

               Conread position:
               1-173
               

               Cow position:
               chr11:70483965-70484140 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               134
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               70, 147
               

               Conread position:
               1-176
               

               Cow position:
               chr11:65409261-65409439 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               132
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               70, 147
               

               Conread position:
               1-177
               

               Cow position:
               chr11:76114548-76114372 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               138
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               108, 141
               

               Conread position:
               4-137
               

               Cow position:
               chr11:8525220-8525357 (view UCSC Genome Browser custom track)
               

               Alignm length:
               138
               

               Alignm identity:
               107
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               55, 0
               

               Conread position:
               4-168
               

               Cow position:
               chr11:11232564-11232728 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               129
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               121, 81
               

               Conread position:
               4-176
               

               Cow position:
               chr11:74316603-74316425 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               135
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               56, 148
               

               Conread position:
               1-163
               

               Cow position:
               chr12:41214449-41214606 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               131
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               131, 0
               

               Conread position:
               1-172
               

               Cow position:
               chr12:3510440-3510268 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               139
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               70, 139
               

               Conread position:
               1-172
               

               Cow position:
               chr12:6210284-6210454 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               138
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               143, 0
               

               Conread position:
               1-176
               

               Cow position:
               chr12:3568818-3568646 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               128
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               82, 0
               

               Conread position:
               1-176
               

               Cow position:
               chr12:21393578-21393397 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               133
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               71, 51
               

               Conread position:
               1-177
               

               Cow position:
               chr12:11836106-11835939 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               133
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               173, 62
               

               Conread position:
               1-183
               

               Cow position:
               chr12:8869004-8869190 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               145
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               70, 146
               

               Conread position:
               4-121
               

               Cow position:
               chr12:19372232-19372353 (view UCSC Genome Browser custom track)
               

               Alignm length:
               122
               

               Alignm identity:
               96
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               67, 0
               

               Conread position:
               4-223
               

               Cow position:
               chr12:24032875-24032654 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               165
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               175, 54
               

               Conread position:
               1-147
               

               Cow position:
               chr13:8609477-8609327 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               121
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               15, 33
               

               Conread position:
               1-148
               

               Cow position:
               chr13:563069-562917 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               120
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               62, 0
               

               Conread position:
               1-149
               

               Cow position:
               chr13:51821816-51821670 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               120
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               43, 0
               

               Conread position:
               1-165
               

               Cow position:
               chr13:43184798-43184635 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               131
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               42, 0
               

               Conread position:
               1-168
               

               Cow position:
               chr13:311504-311670 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               126
               

               Alignm E-value:
               8e-30
               

               Alignm gaps (pig, cow):
               143, 0
               

               Conread position:
               1-168
               

               Cow position:
               chr13:13176725-13176889 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               128
               

               Alignm E-value:
               8e-30
               

               Alignm gaps (pig, cow):
               49, 0
               

               Conread position:
               1-173
               

               Cow position:
               chr13:12282908-12283080 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               134
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               70, 144
               

               Conread position:
               1-176
               

               Cow position:
               chr13:14544192-14544370 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               137
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               71, 146
               

               Conread position:
               1-176
               

               Cow position:
               chr13:32017452-32017275 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               140
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               62, 145
               

               Conread position:
               4-119
               

               Cow position:
               chr13:5079147-5079033 (view UCSC Genome Browser custom track)
               

               Alignm length:
               116
               

               Alignm identity:
               91
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               102, 0
               

               Conread position:
               4-167
               

               Cow position:
               chr13:38329703-38329869 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               128
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               59, 144
               

               Conread position:
               4-170
               

               Cow position:
               chr13:31813948-31814109 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               133
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               75, 0
               

               Conread position:
               4-184
               

               Cow position:
               chr13:45023135-45022952 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               143
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               59, 153
               

               Conread position:
               1-176
               

               Cow position:
               chr14:5836032-5836210 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               142
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               142, 0
               

               Conread position:
               1-176
               

               Cow position:
               chr14:21534904-21534738 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               143
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               53, 0
               

               Conread position:
               4-173
               

               Cow position:
               chr14:34199715-34199538 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               140
               

               Alignm E-value:
               8e-32
               

               Alignm gaps (pig, cow):
               37, 148
               

               Conread position:
               5-171
               

               Cow position:
               chr14:48412745-48412576 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               131
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               66, 142
               

               Conread position:
               5-172
               

               Cow position:
               chr14:35651070-35650904 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               134
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               12, 21
               

               Conread position:
               1-130
               

               Cow position:
               chr15:225630-225496 (view UCSC Genome Browser custom track)
               

               Alignm length:
               136
               

               Alignm identity:
               107
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               22, 67
               

               Conread position:
               1-155
               

               Cow position:
               chr15:31857766-31857923 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               123
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               60, 147
               

               Conread position:
               1-173
               

               Cow position:
               chr15:26404452-26404618 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               133
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               75, 0
               

               Conread position:
               1-173
               

               Cow position:
               chr15:33605100-33605270 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               133
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               134, 0
               

               Conread position:
               1-176
               

               Cow position:
               chr15:5234826-5234653 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               136
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               143, 0
               

               Conread position:
               1-140
               

               Cow position:
               chr16:50289061-50288929 (view UCSC Genome Browser custom track)
               

               Alignm length:
               141
               

               Alignm identity:
               111
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               51, 60
               

               Conread position:
               1-145
               

               Cow position:
               chr16:21905077-21904930 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               113
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               60, 143
               

               Conread position:
               1-146
               

               Cow position:
               chr16:5896330-5896185 (view UCSC Genome Browser custom track)
               

               Alignm length:
               146
               

               Alignm identity:
               114
               

               Alignm E-value:
               8e-30
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-163
               

               Cow position:
               chr16:47620292-47620130 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               129
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               58, 143
               

               Conread position:
               1-171
               

               Cow position:
               chr16:4699069-4699227 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               133
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               57, 0
               

               Conread position:
               1-172
               

               Cow position:
               chr16:13306952-13307122 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               137
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               58, 134
               

               Conread position:
               1-172
               

               Cow position:
               chr16:53627516-53627682 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               134
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               76, 0
               

               Conread position:
               1-175
               

               Cow position:
               chr16:49125617-49125782 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               134
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               76, 0
               

               Conread position:
               1-176
               

               Cow position:
               chr16:590005-590172 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               142
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               58, 0
               

               Conread position:
               1-176
               

               Cow position:
               chr16:16402412-16402590 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               137
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               58, 147
               

               Conread position:
               1-177
               

               Cow position:
               chr16:26501068-26500897 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               140
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               45, 0
               

               Conread position:
               1-177
               

               Cow position:
               chr16:33507978-33507799 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               139
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               62, 147
               

               Conread position:
               1-177
               

               Cow position:
               chr16:47017333-47017508 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               131
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               58, 144
               

               Conread position:
               1-188
               

               Cow position:
               chr16:52889497-52889686 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               152
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               74, 145
               

               Conread position:
               4-155
               

               Cow position:
               chr16:3634021-3633873 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               115
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               67, 0
               

               Conread position:
               4-166
               

               Cow position:
               chr16:6379199-6379365 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               129
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               67, 87
               

               Conread position:
               4-171
               

               Cow position:
               chr16:42777875-42777705 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               131
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               56, 144
               

               Conread position:
               4-173
               

               Cow position:
               chr16:19643797-19643635 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               130
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               51, 0
               

               Conread position:
               1-170
               

               Cow position:
               chr17:25097415-25097247 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               135
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               60, 93
               

               Conread position:
               1-176
               

               Cow position:
               chr17:5224353-5224181 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               142
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               37, 75
               

               Conread position:
               1-176
               

               Cow position:
               chr17:36533609-36533439 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               130
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               70, 0
               

               Conread position:
               1-199
               

               Cow position:
               chr17:6423713-6423515 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               147
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               89, 84
               

               Conread position:
               4-160
               

               Cow position:
               chr17:27765219-27765075 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               119
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               41, 0
               

               Conread position:
               4-173
               

               Cow position:
               chr17:27142709-27142537 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               130
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               68, 135
               

               Conread position:
               4-176
               

               Cow position:
               chr17:17060731-17060907 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               137
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               63, 36
               

               Conread position:
               4-176
               

               Cow position:
               chr17:30665221-30665052 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               143
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               20, 52
               

               Conread position:
               5-176
               

               Cow position:
               chr17:41290072-41290239 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               131
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               66, 89
               

               Conread position:
               1-142
               

               Cow position:
               chr18:7059108-7058967 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               116
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               134, 73
               

               Conread position:
               1-148
               

               Cow position:
               chr18:48453573-48453425 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               119
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               58, 0
               

               Conread position:
               1-168
               

               Cow position:
               chr18:20641612-20641772 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               126
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               24, 18
               

               Conread position:
               1-169
               

               Cow position:
               chr18:4368897-4369068 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               123
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               83, 147
               

               Conread position:
               1-170
               

               Cow position:
               chr18:56163466-56163298 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               134
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               143, 0
               

               Conread position:
               1-172
               

               Cow position:
               chr18:33157697-33157530 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               130
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               52, 0
               

               Conread position:
               1-172
               

               Cow position:
               chr18:56168040-56168210 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               125
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               48, 113
               

               Conread position:
               1-177
               

               Cow position:
               chr18:35012429-35012602 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               134
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               53, 0
               

               Conread position:
               4-173
               

               Cow position:
               chr18:37002509-37002337 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               130
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               56, 144
               

               Conread position:
               5-184
               

               Cow position:
               chr18:49655581-49655412 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               143
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               49, 0
               

               Conread position:
               5-199
               

               Cow position:
               chr18:11695153-11694963 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               147
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               73, 40
               

               Conread position:
               1-146
               

               Cow position:
               chr19:34911788-34911640 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               122
               

               Alignm E-value:
               9e-32
               

               Alignm gaps (pig, cow):
               69, 128
               

               Conread position:
               1-168
               

               Cow position:
               chr19:15863141-15863304 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               135
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               54, 0
               

               Conread position:
               1-171
               

               Cow position:
               chr19:12698224-12698055 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               137
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               57, 144
               

               Conread position:
               1-171
               

               Cow position:
               chr19:38637905-38638070 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               138
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               94, 58
               

               Conread position:
               1-172
               

               Cow position:
               chr19:33932248-33932411 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               140
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               53, 0
               

               Conread position:
               1-182
               

               Cow position:
               chr19:42726261-42726074 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               138
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               62, 0
               

               Conread position:
               4-156
               

               Cow position:
               chr19:19919564-19919715 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               119
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               60, 110
               

               Conread position:
               4-173
               

               Cow position:
               chr19:44757716-44757877 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               134
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               57, 0
               

               Conread position:
               1-146
               

               Cow position:
               chr2:60956285-60956140 (view UCSC Genome Browser custom track)
               

               Alignm length:
               146
               

               Alignm identity:
               110
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-156
               

               Cow position:
               chr2:66480276-66480420 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               125
               

               Alignm E-value:
               9e-28
               

               Alignm gaps (pig, cow):
               53, 0
               

               Conread position:
               1-160
               

               Cow position:
               chr2:81927766-81927608 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               131
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               58, 0
               

               Conread position:
               1-162
               

               Cow position:
               chr2:333173-333324 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               125
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               45, 0
               

               Conread position:
               1-162
               

               Cow position:
               chr2:25964576-25964733 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               128
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               44, 0
               

               Conread position:
               1-172
               

               Cow position:
               chr2:19212140-19212301 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               141
               

               Alignm E-value:
               8e-37
               

               Alignm gaps (pig, cow):
               53, 0
               

               Conread position:
               1-172
               

               Cow position:
               chr2:27173282-27173109 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               142
               

               Alignm E-value:
               9e-38
               

               Alignm gaps (pig, cow):
               62, 47
               

               Conread position:
               1-172
               

               Cow position:
               chr2:40691401-40691230 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               139
               

               Alignm E-value:
               8e-37
               

               Alignm gaps (pig, cow):
               56, 145
               

               Conread position:
               1-172
               

               Cow position:
               chr2:42255348-42255173 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               145
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               70, 43
               

               Conread position:
               1-172
               

               Cow position:
               chr2:71624468-71624634 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               130
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               81, 0
               

               Conread position:
               1-173
               

               Cow position:
               chr2:42607978-42607812 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               135
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               74, 0
               

               Conread position:
               1-173
               

               Cow position:
               chr2:61485541-61485377 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               130
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               53, 0
               

               Conread position:
               1-176
               

               Cow position:
               chr2:988606-988429 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               140
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               67, 138
               

               Conread position:
               1-176
               

               Cow position:
               chr2:36007673-36007838 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               134
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               90, 0
               

               Conread position:
               1-176
               

               Cow position:
               chr2:41710788-41710619 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               136
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               58, 0
               

               Conread position:
               1-176
               

               Cow position:
               chr2:46312364-46312189 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               144
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               104, 44
               

               Conread position:
               1-179
               

               Cow position:
               chr2:35092779-35092953 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               138
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               53, 0
               

               Conread position:
               1-189
               

               Cow position:
               chr2:15250093-15249906 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               146
               

               Alignm E-value:
               6e-34
               

               Alignm gaps (pig, cow):
               149, 67
               

               Conread position:
               1-199
               

               Cow position:
               chr2:40881989-40881801 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               143
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               170, 56
               

               Conread position:
               4-171
               

               Cow position:
               chr2:14884193-14884028 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               135
               

               Alignm E-value:
               9e-38
               

               Alignm gaps (pig, cow):
               140, 0
               

               Conread position:
               4-176
               

               Cow position:
               chr2:51824833-51824666 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               141
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               55, 0
               

               Conread position:
               4-185
               

               Cow position:
               chr2:12185930-12185752 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               140
               

               Alignm E-value:
               9e-28
               

               Alignm gaps (pig, cow):
               23, 13
               

               Conread position:
               1-101
               

               Cow position:
               chr20:9730040-9729939 (view UCSC Genome Browser custom track)
               

               Alignm length:
               102
               

               Alignm identity:
               84
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               69, 0
               

               Conread position:
               1-107
               

               Cow position:
               chr20:5636438-5636328 (view UCSC Genome Browser custom track)
               

               Alignm length:
               111
               

               Alignm identity:
               90
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               62, 0
               

               Conread position:
               1-141
               

               Cow position:
               chr20:37165680-37165540 (view UCSC Genome Browser custom track)
               

               Alignm length:
               141
               

               Alignm identity:
               118
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-147
               

               Cow position:
               chr20:8020852-8020702 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               116
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               59, 0
               

               Conread position:
               1-152
               

               Cow position:
               chr20:38578805-38578954 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               117
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               43, 0
               

               Conread position:
               1-160
               

               Cow position:
               chr20:14572405-14572560 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               130
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               53, 0
               

               Conread position:
               1-172
               

               Cow position:
               chr20:14735630-14735461 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               146
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 0
               

               Conread position:
               1-173
               

               Cow position:
               chr20:20312792-20312954 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               140
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               76, 0
               

               Conread position:
               1-173
               

               Cow position:
               chr20:30817489-30817320 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               132
               

               Alignm E-value:
               7e-32
               

               Alignm gaps (pig, cow):
               68, 0
               

               Conread position:
               1-176
               

               Cow position:
               chr20:7659264-7659429 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               139
               

               Alignm E-value:
               7e-32
               

               Alignm gaps (pig, cow):
               52, 0
               

               Conread position:
               1-177
               

               Cow position:
               chr20:42469716-42469545 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               137
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               31, 49
               

               Conread position:
               2-184
               

               Cow position:
               chr20:23850237-23850056 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               144
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               22, 45
               

               Conread position:
               4-170
               

               Cow position:
               chr20:3781475-3781641 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               127
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               4-172
               

               Cow position:
               chr20:33532259-33532095 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               132
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               28, 38
               

               Conread position:
               1-142
               

               Cow position:
               chr21:28244444-28244310 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               113
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               54, 0
               

               Conread position:
               1-162
               

               Cow position:
               chr21:35897657-35897810 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               131
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               62, 0
               

               Conread position:
               1-167
               

               Cow position:
               chr21:18494944-18494776 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               137
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               75, 147
               

               Conread position:
               1-173
               

               Cow position:
               chr21:911992-912163 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               133
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               143, 0
               

               Conread position:
               1-173
               

               Cow position:
               chr21:16187833-16187996 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               132
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               54, 60
               

               Conread position:
               1-173
               

               Cow position:
               chr21:39888773-39888940 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               129
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               76, 0
               

               Conread position:
               1-176
               

               Cow position:
               chr21:41878446-41878277 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               130
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               76, 0
               

               Conread position:
               1-185
               

               Cow position:
               chr21:2785801-2785986 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               138
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               70, 144
               

               Conread position:
               4-156
               

               Cow position:
               chr21:35897454-35897303 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               126
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               140, 0
               

               Conread position:
               4-170
               

               Cow position:
               chr21:10264005-10263850 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               125
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               52, 0
               

               Conread position:
               4-173
               

               Cow position:
               chr21:44671729-44671557 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               142
               

               Alignm E-value:
               6e-40
               

               Alignm gaps (pig, cow):
               59, 144
               

               Conread position:
               4-176
               

               Cow position:
               chr21:39401566-39401401 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               135
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               133, 0
               

               Conread position:
               5-166
               

               Cow position:
               chr21:47764144-47764301 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               125
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               73, 49
               

               Conread position:
               5-173
               

               Cow position:
               chr21:38449476-38449648 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               134
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               39, 53
               

               Conread position:
               1-148
               

               Cow position:
               chr22:40349258-40349111 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               116
               

               Alignm E-value:
               7e-31
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-155
               

               Cow position:
               chr22:34618640-34618488 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               125
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               56, 0
               

               Conread position:
               1-165
               

               Cow position:
               chr22:30964029-30963876 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               130
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               44, 36
               

               Conread position:
               1-172
               

               Cow position:
               chr22:1309820-1309989 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               120
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               140, 0
               

               Conread position:
               1-172
               

               Cow position:
               chr22:8412436-8412262 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               131
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               71, 147
               

               Conread position:
               1-173
               

               Cow position:
               chr22:24611172-24611339 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               143
               

               Alignm E-value:
               7.00005e-41
               

               Alignm gaps (pig, cow):
               70, 0
               

               Conread position:
               1-176
               

               Cow position:
               chr22:14601412-14601248 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               130
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               57, 0
               

               Conread position:
               1-176
               

               Cow position:
               chr22:21890448-21890625 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               131
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               62, 147
               

               Conread position:
               1-176
               

               Cow position:
               chr22:22861001-22861177 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               136
               

               Alignm E-value:
               8e-32
               

               Alignm gaps (pig, cow):
               58, 146
               

               Conread position:
               1-176
               

               Cow position:
               chr22:39472468-39472642 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               138
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               143, 0
               

               Conread position:
               1-182
               

               Cow position:
               chr22:28937990-28938178 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               144
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               20, 105
               

               Conread position:
               4-173
               

               Cow position:
               chr22:30515157-30514992 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               133
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               140, 0
               

               Conread position:
               27-177
               

               Cow position:
               chr22:6852980-6853129 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               119
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               101, 45
               

               Conread position:
               1-111
               

               Cow position:
               chr23:19371157-19371268 (view UCSC Genome Browser custom track)
               

               Alignm length:
               112
               

               Alignm identity:
               89
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               84, 0
               

               Conread position:
               1-147
               

               Cow position:
               chr23:22530501-22530651 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               119
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               57, 0
               

               Conread position:
               1-152
               

               Cow position:
               chr23:27544742-27544595 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               122
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               58, 0
               

               Conread position:
               1-170
               

               Cow position:
               chr23:26632716-26632545 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               141
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               75, 155
               

               Conread position:
               1-173
               

               Cow position:
               chr23:3247498-3247330 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               136
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               62, 0
               

               Conread position:
               1-176
               

               Cow position:
               chr23:344261-344439 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               146
               

               Alignm E-value:
               5.99994e-41
               

               Alignm gaps (pig, cow):
               63, 147
               

               Conread position:
               1-184
               

               Cow position:
               chr23:14164488-14164669 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               147
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               77, 0
               

               Conread position:
               1-124
               

               Cow position:
               chr24:25194156-25194030 (view UCSC Genome Browser custom track)
               

               Alignm length:
               127
               

               Alignm identity:
               100
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               59, 0
               

               Conread position:
               1-171
               

               Cow position:
               chr24:20969912-20970074 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               125
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               51, 0
               

               Conread position:
               1-171
               

               Cow position:
               chr24:38375172-38375003 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               137
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               87, 139
               

               Conread position:
               1-172
               

               Cow position:
               chr24:2675209-2675048 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               125
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               41, 0
               

               Conread position:
               1-172
               

               Cow position:
               chr24:34742642-34742466 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               136
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               91, 123
               

               Conread position:
               1-172
               

               Cow position:
               chr24:43200389-43200557 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               137
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               107, 55
               

               Conread position:
               1-172
               

               Cow position:
               chr24:43635325-43635152 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               129
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               57, 147
               

               Conread position:
               1-176
               

               Cow position:
               chr24:19804578-19804400 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               139
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               62, 147
               

               Conread position:
               1-184
               

               Cow position:
               chr24:28721778-28721593 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               140
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               62, 127
               

               Conread position:
               1-199
               

               Cow position:
               chr24:35794849-35795053 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               159
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               62, 147
               

               Conread position:
               3-172
               

               Cow position:
               chr24:27465692-27465855 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               126
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               149, 60
               

               Conread position:
               4-138
               

               Cow position:
               chr24:6487807-6487670 (view UCSC Genome Browser custom track)
               

               Alignm length:
               139
               

               Alignm identity:
               109
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               59, 94
               

               Conread position:
               4-152
               

               Cow position:
               chr24:41755747-41755599 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               112
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               67, 41
               

               Conread position:
               4-166
               

               Cow position:
               chr24:36404260-36404424 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               122
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               71, 135
               

               Conread position:
               4-176
               

               Cow position:
               chr24:17104688-17104854 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               137
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               34, 0
               

               Conread position:
               4-183
               

               Cow position:
               chr24:28553663-28553838 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               138
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               81, 0
               

               Conread position:
               1-148
               

               Cow position:
               chr25:7329457-7329306 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               121
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               78, 0
               

               Conread position:
               1-148
               

               Cow position:
               chr25:15377237-15377095 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               120
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               76, 0
               

               Conread position:
               1-168
               

               Cow position:
               chr25:22297109-22297274 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               125
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               75, 0
               

               Conread position:
               1-172
               

               Cow position:
               chr25:2110986-2110822 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               136
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               76, 0
               

               Conread position:
               1-176
               

               Cow position:
               chr25:16921881-16922057 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               137
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               55, 147
               

               Conread position:
               1-176
               

               Cow position:
               chr25:24167992-24168163 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               133
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               70, 141
               

               Conread position:
               1-176
               

               Cow position:
               chr25:31732824-31733001 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               138
               

               Alignm E-value:
               7e-32
               

               Alignm gaps (pig, cow):
               73, 49
               

               Conread position:
               1-177
               

               Cow position:
               chr25:788174-788001 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               134
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               170, 77
               

               Conread position:
               1-201
               

               Cow position:
               chr25:20008044-20007849 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               150
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               145, 53
               

               Conread position:
               1-240
               

               Cow position:
               chr25:36081786-36081548 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               180
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               70, 153
               

               Conread position:
               4-172
               

               Cow position:
               chr25:15273595-15273429 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               128
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               131, 0
               

               Conread position:
               1-141
               

               Cow position:
               chr26:33567117-33567255 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               119
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               23, 45
               

               Conread position:
               1-168
               

               Cow position:
               chr26:6714365-6714521 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               133
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               44, 0
               

               Conread position:
               1-176
               

               Cow position:
               chr26:8811058-8810886 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               134
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               57, 0
               

               Conread position:
               4-171
               

               Cow position:
               chr26:32013553-32013389 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               134
               

               Alignm E-value:
               8e-35
               

               Alignm gaps (pig, cow):
               36, 74
               

               Conread position:
               1-155
               

               Cow position:
               chr27:21569798-21569645 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               122
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               22, 42
               

               Conread position:
               1-172
               

               Cow position:
               chr27:22179749-22179582 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               136
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               31, 16
               

               Conread position:
               1-173
               

               Cow position:
               chr27:30362288-30362459 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               141
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               59, 118
               

               Conread position:
               1-184
               

               Cow position:
               chr27:8942638-8942456 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               132
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               20, 64
               

               Conread position:
               4-156
               

               Cow position:
               chr27:13875779-13875931 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               124
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               59, 132
               

               Conread position:
               4-162
               

               Cow position:
               chr27:26807515-26807358 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               113
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               140, 0
               

               Conread position:
               4-170
               

               Cow position:
               chr27:706999-707160 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               127
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               89, 0
               

               Conread position:
               4-176
               

               Cow position:
               chr27:28190169-28189998 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               138
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               140, 0
               

               Conread position:
               1-172
               

               Cow position:
               chr28:33051945-33051767 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               139
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               59, 151
               

               Conread position:
               1-173
               

               Cow position:
               chr28:27218241-27218066 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               132
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               67, 147
               

               Conread position:
               1-176
               

               Cow position:
               chr28:21598337-21598510 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               133
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               109, 103
               

               Conread position:
               4-147
               

               Cow position:
               chr28:23676054-23675914 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               115
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               59, 0
               

               Conread position:
               1-136
               

               Cow position:
               chr29:3711300-3711161 (view UCSC Genome Browser custom track)
               

               Alignm length:
               141
               

               Alignm identity:
               113
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               22, 63
               

               Conread position:
               1-148
               

               Cow position:
               chr29:16309652-16309513 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               117
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               51, 0
               

               Conread position:
               1-149
               

               Cow position:
               chr29:4520245-4520097 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               127
               

               Alignm E-value:
               7.00005e-41
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-171
               

               Cow position:
               chr29:29769441-29769605 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               132
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               62, 0
               

               Conread position:
               1-172
               

               Cow position:
               chr29:39567597-39567428 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               134
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               143, 0
               

               Conread position:
               1-176
               

               Cow position:
               chr29:35292000-35291835 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               139
               

               Alignm E-value:
               9e-34
               

               Alignm gaps (pig, cow):
               76, 0
               

               Conread position:
               1-181
               

               Cow position:
               chr29:28868546-28868362 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               148
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               78, 0
               

               Conread position:
               1-107
               

               Cow position:
               chr3:16656589-16656699 (view UCSC Genome Browser custom track)
               

               Alignm length:
               111
               

               Alignm identity:
               91
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               71, 0
               

               Conread position:
               1-128
               

               Cow position:
               chr3:83201636-83201767 (view UCSC Genome Browser custom track)
               

               Alignm length:
               132
               

               Alignm identity:
               106
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               58, 0
               

               Conread position:
               1-133
               

               Cow position:
               chr3:77006388-77006261 (view UCSC Genome Browser custom track)
               

               Alignm length:
               133
               

               Alignm identity:
               103
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               54, 0
               

               Conread position:
               1-145
               

               Cow position:
               chr3:73708936-73708793 (view UCSC Genome Browser custom track)
               

               Alignm length:
               145
               

               Alignm identity:
               124
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               112, 0
               

               Conread position:
               1-148
               

               Cow position:
               chr3:18393500-18393643 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               118
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               70, 0
               

               Conread position:
               1-149
               

               Cow position:
               chr3:56476568-56476422 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               122
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               70, 0
               

               Conread position:
               1-162
               

               Cow position:
               chr3:6873356-6873517 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               128
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               29, 16
               

               Conread position:
               1-166
               

               Cow position:
               chr3:5899709-5899550 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               130
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               58, 0
               

               Conread position:
               1-168
               

               Cow position:
               chr3:5374222-5374057 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               135
               

               Alignm E-value:
               6e-34
               

               Alignm gaps (pig, cow):
               49, 60
               

               Conread position:
               1-170
               

               Cow position:
               chr3:34392209-34392376 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               136
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               77, 58
               

               Conread position:
               1-172
               

               Cow position:
               chr3:17895734-17895572 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               129
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               57, 0
               

               Conread position:
               1-172
               

               Cow position:
               chr3:29813132-29812962 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               140
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               58, 144
               

               Conread position:
               1-173
               

               Cow position:
               chr3:48296597-48296428 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               130
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               140, 0
               

               Conread position:
               1-173
               

               Cow position:
               chr3:72675980-72675804 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               147
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               62, 148
               

               Conread position:
               1-176
               

               Cow position:
               chr3:1830681-1830849 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               136
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               80, 0
               

               Conread position:
               1-176
               

               Cow position:
               chr3:58951509-58951335 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               126
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               143, 0
               

               Conread position:
               1-191
               

               Cow position:
               chr3:67704430-67704239 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               148
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               63, 145
               

               Conread position:
               4-127
               

               Cow position:
               chr3:4861574-4861451 (view UCSC Genome Browser custom track)
               

               Alignm length:
               124
               

               Alignm identity:
               107
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               4-176
               

               Cow position:
               chr3:70895935-70895760 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               140
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               59, 144
               

               Conread position:
               5-202
               

               Cow position:
               chr3:65413396-65413587 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               152
               

               Alignm E-value:
               6e-34
               

               Alignm gaps (pig, cow):
               181, 54
               

               Conread position:
               1-156
               

               Cow position:
               chr4:11099765-11099919 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               122
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               142, 0
               

               Conread position:
               1-160
               

               Cow position:
               chr4:41292072-41292234 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               132
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               60, 147
               

               Conread position:
               1-169
               

               Cow position:
               chr4:23854100-23853941 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               131
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               89, 45
               

               Conread position:
               1-173
               

               Cow position:
               chr4:39009870-39009700 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               129
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               59, 141
               

               Conread position:
               1-173
               

               Cow position:
               chr4:60897372-60897540 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               135
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               45, 0
               

               Conread position:
               1-176
               

               Cow position:
               chr4:480101-480277 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               141
               

               Alignm E-value:
               7e-38
               

               Alignm gaps (pig, cow):
               74, 145
               

               Conread position:
               1-176
               

               Cow position:
               chr4:7249665-7249839 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               127
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               23, 59
               

               Conread position:
               1-176
               

               Cow position:
               chr4:15905002-15904828 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               138
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               142, 0
               

               Conread position:
               1-176
               

               Cow position:
               chr4:40414724-40414901 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               139
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               63, 98
               

               Conread position:
               1-189
               

               Cow position:
               chr4:36724942-36724760 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               108
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               76, 0
               

               Conread position:
               1-199
               

               Cow position:
               chr4:5460956-5461147 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               155
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               23, 79
               

               Conread position:
               4-144
               

               Cow position:
               chr4:6653630-6653496 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               113
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               50, 74
               

               Conread position:
               4-147
               

               Cow position:
               chr4:13255989-13255853 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               110
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               55, 0
               

               Conread position:
               4-154
               

               Cow position:
               chr4:67599836-67599981 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               111
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               68, 0
               

               Conread position:
               4-172
               

               Cow position:
               chr4:51739808-51739969 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               131
               

               Alignm E-value:
               9e-30
               

               Alignm gaps (pig, cow):
               59, 0
               

               Conread position:
               1-142
               

               Cow position:
               chr5:35449190-35449049 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               117
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-144
               

               Cow position:
               chr5:42744725-42744587 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               115
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               76, 0
               

               Conread position:
               1-149
               

               Cow position:
               chr5:40039833-40039982 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               121
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               58, 0
               

               Conread position:
               1-166
               

               Cow position:
               chr5:56820325-56820487 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               136
               

               Alignm E-value:
               9e-39
               

               Alignm gaps (pig, cow):
               107, 0
               

               Conread position:
               1-168
               

               Cow position:
               chr5:32696884-32697042 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               135
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               39, 0
               

               Conread position:
               1-168
               

               Cow position:
               chr5:46122413-46122578 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               123
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               89, 81
               

               Conread position:
               1-172
               

               Cow position:
               chr5:17063153-17063327 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               134
               

               Alignm E-value:
               9e-29
               

               Alignm gaps (pig, cow):
               50, 91
               

               Conread position:
               1-172
               

               Cow position:
               chr5:34300853-34300692 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               137
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               70, 0
               

               Conread position:
               1-172
               

               Cow position:
               chr5:35145286-35145119 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               140
               

               Alignm E-value:
               9e-39
               

               Alignm gaps (pig, cow):
               58, 0
               

               Conread position:
               1-172
               

               Cow position:
               chr5:65776445-65776619 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               131
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               62, 147
               

               Conread position:
               1-177
               

               Cow position:
               chr5:58793677-58793853 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               143
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               49, 60
               

               Conread position:
               1-183
               

               Cow position:
               chr5:4710208-4710386 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               134
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               107, 0
               

               Conread position:
               1-183
               

               Cow position:
               chr5:28927652-28927837 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               142
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               68, 147
               

               Conread position:
               1-214
               

               Cow position:
               chr5:44994101-44994312 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               161
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               170, 140
               

               Conread position:
               4-142
               

               Cow position:
               chr5:24837012-24837150 (view UCSC Genome Browser custom track)
               

               Alignm length:
               139
               

               Alignm identity:
               116
               

               Alignm E-value:
               6e-35
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               4-160
               

               Cow position:
               chr5:16025523-16025682 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               126
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               57, 144
               

               Conread position:
               1-144
               

               Cow position:
               chr6:37603474-37603331 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               111
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-145
               

               Cow position:
               chr6:4864597-4864733 (view UCSC Genome Browser custom track)
               

               Alignm length:
               145
               

               Alignm identity:
               116
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               58, 0
               

               Conread position:
               1-146
               

               Cow position:
               chr6:30826081-30826230 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               116
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               69, 97
               

               Conread position:
               1-155
               

               Cow position:
               chr6:15937900-15938054 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               123
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               60, 53
               

               Conread position:
               1-171
               

               Cow position:
               chr6:36928606-36928434 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               130
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               70, 147
               

               Conread position:
               1-172
               

               Cow position:
               chr6:40032144-40031975 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               140
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               62, 96
               

               Conread position:
               1-176
               

               Cow position:
               chr6:6264594-6264421 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               129
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               105, 77
               

               Conread position:
               1-176
               

               Cow position:
               chr6:18988164-18987994 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               141
               

               Alignm E-value:
               7e-38
               

               Alignm gaps (pig, cow):
               56, 0
               

               Conread position:
               1-185
               

               Cow position:
               chr6:9008660-9008842 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               146
               

               Alignm E-value:
               8.99999e-40
               

               Alignm gaps (pig, cow):
               143, 0
               

               Conread position:
               4-153
               

               Cow position:
               chr6:88956-89109 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               120
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               59, 0
               

               Conread position:
               4-154
               

               Cow position:
               chr6:59069676-59069829 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               123
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               59, 144
               

               Conread position:
               4-173
               

               Cow position:
               chr6:38207543-38207715 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               143
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               60, 145
               

               Conread position:
               4-173
               

               Cow position:
               chr6:38771234-38771076 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               132
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               46, 0
               

               Conread position:
               4-182
               

               Cow position:
               chr6:13040405-13040223 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               141
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               71, 0
               

               Conread position:
               4-185
               

               Cow position:
               chr6:52248183-52248367 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               145
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               64, 141
               

               Conread position:
               1-137
               

               Cow position:
               chr7:51019736-51019604 (view UCSC Genome Browser custom track)
               

               Alignm length:
               139
               

               Alignm identity:
               117
               

               Alignm E-value:
               9e-30
               

               Alignm gaps (pig, cow):
               23, 45
               

               Conread position:
               1-147
               

               Cow position:
               chr7:12995114-12994965 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               119
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               62, 44
               

               Conread position:
               1-155
               

               Cow position:
               chr7:39930245-39930098 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               120
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               58, 0
               

               Conread position:
               1-169
               

               Cow position:
               chr7:37718501-37718342 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               130
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               57, 0
               

               Conread position:
               1-172
               

               Cow position:
               chr7:147365-147194 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               132
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               61, 53
               

               Conread position:
               1-172
               

               Cow position:
               chr7:27283636-27283462 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               140
               

               Alignm E-value:
               7e-37
               

               Alignm gaps (pig, cow):
               79, 147
               

               Conread position:
               1-172
               

               Cow position:
               chr7:42244740-42244913 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               144
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               149, 0
               

               Conread position:
               1-174
               

               Cow position:
               chr7:53097541-53097380 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               131
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               52, 0
               

               Conread position:
               1-176
               

               Cow position:
               chr7:40567025-40566853 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               136
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               70, 0
               

               Conread position:
               1-177
               

               Cow position:
               chr7:52718681-52718855 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               140
               

               Alignm E-value:
               7e-38
               

               Alignm gaps (pig, cow):
               143, 0
               

               Conread position:
               1-191
               

               Cow position:
               chr7:53786005-53786196 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               154
               

               Alignm E-value:
               6e-36
               

               Alignm gaps (pig, cow):
               62, 110
               

               Conread position:
               4-155
               

               Cow position:
               chr7:41879551-41879702 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               115
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               53, 89
               

               Conread position:
               4-184
               

               Cow position:
               chr7:17782728-17782901 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               144
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               51, 0
               

               Conread position:
               5-173
               

               Cow position:
               chr7:23619136-23619303 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               139
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               139, 0
               

               Conread position:
               1-155
               

               Cow position:
               chr8:1169355-1169499 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               119
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               101, 0
               

               Conread position:
               1-171
               

               Cow position:
               chr8:2865830-2865660 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               131
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               74, 97
               

               Conread position:
               1-172
               

               Cow position:
               chr8:18207212-18207395 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               137
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               51, 156
               

               Conread position:
               1-172
               

               Cow position:
               chr8:60488704-60488876 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               144
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               151, 162
               

               Conread position:
               1-173
               

               Cow position:
               chr8:13922350-13922183 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               138
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               53, 0
               

               Conread position:
               1-173
               

               Cow position:
               chr8:31762897-31763066 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               138
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               53, 77
               

               Conread position:
               1-173
               

               Cow position:
               chr8:51579193-51579018 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               136
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               62, 144
               

               Conread position:
               1-176
               

               Cow position:
               chr8:2814544-2814368 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               133
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               71, 131
               

               Conread position:
               1-176
               

               Cow position:
               chr8:6232976-6233150 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               143
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               143, 0
               

               Conread position:
               1-176
               

               Cow position:
               chr8:56581283-56581451 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               138
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               80, 55
               

               Conread position:
               1-177
               

               Cow position:
               chr8:10434730-10434553 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               138
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               70, 103
               

               Conread position:
               1-188
               

               Cow position:
               chr8:42607356-42607534 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               141
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               185, 68
               

               Conread position:
               4-168
               

               Cow position:
               chr8:32988662-32988501 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               126
               

               Alignm E-value:
               8e-30
               

               Alignm gaps (pig, cow):
               67, 0
               

               Conread position:
               4-171
               

               Cow position:
               chr8:45664693-45664527 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               132
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               17, 69
               

               Conread position:
               4-172
               

               Cow position:
               chr8:11606253-11606086 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               136
               

               Alignm E-value:
               7e-39
               

               Alignm gaps (pig, cow):
               140, 0
               

               Conread position:
               4-172
               

               Cow position:
               chr8:11612466-11612299 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               131
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               140, 0
               

               Conread position:
               4-172
               

               Cow position:
               chr8:24867823-24867994 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               140
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               67, 143
               

               Conread position:
               4-199
               

               Cow position:
               chr8:54269091-54269273 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               150
               

               Alignm E-value:
               9e-31
               

               Alignm gaps (pig, cow):
               182, 44
               

               Conread position:
               1-146
               

               Cow position:
               chr9:16182372-16182227 (view UCSC Genome Browser custom track)
               

               Alignm length:
               146
               

               Alignm identity:
               112
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-160
               

               Cow position:
               chr9:55287780-55287615 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               129
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               63, 150
               

               Conread position:
               1-169
               

               Cow position:
               chr9:18216986-18216814 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               129
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               62, 0
               

               Conread position:
               1-171
               

               Cow position:
               chr9:26310672-26310845 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               131
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               70, 147
               

               Conread position:
               1-172
               

               Cow position:
               chr9:22151965-22151800 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               138
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               44, 0
               

               Conread position:
               1-176
               

               Cow position:
               chr9:1350329-1350154 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               130
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               70, 53
               

               Conread position:
               1-176
               

               Cow position:
               chr9:62442408-62442573 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               133
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               29, 37
               

               Conread position:
               4-172
               

               Cow position:
               chr9:29006683-29006848 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               140
               

               Alignm E-value:
               8.99998e-41
               

               Alignm gaps (pig, cow):
               42, 0
               

               Conread position:
               4-173
               

               Cow position:
               chr9:5245976-5246137 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               137
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               59, 0
               

               Conread position:
               5-176
               

               Cow position:
               chr9:38344012-38344187 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               146
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               62, 0
               

               Conread position:
               1-129
               

               Cow position:
               chrX:1505649-1505522 (view UCSC Genome Browser custom track)
               

               Alignm length:
               131
               

               Alignm identity:
               102
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               20, 64
               

               Conread position:
               1-155
               

               Cow position:
               chrX:29601892-29602048 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               130
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               60, 136
               

               Conread position:
               1-162
               

               Cow position:
               chrX:33000841-33000679 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               121
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               44, 59
               

               Conread position:
               1-168
               

               Cow position:
               chrX:19015376-19015214 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               135
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               62, 0
               

               Conread position:
               1-172
               

               Cow position:
               chrX:15815025-15814865 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               130
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               77, 0
               

               Conread position:
               1-172
               

               Cow position:
               chrX:23514077-23514250 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               143
               

               Alignm E-value:
               6e-39
               

               Alignm gaps (pig, cow):
               101, 127
               

               Conread position:
               1-172
               

               Cow position:
               chrX:39558412-39558580 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               142
               

               Alignm E-value:
               8.00001e-42
               

               Alignm gaps (pig, cow):
               52, 0
               

               Conread position:
               1-173
               

               Cow position:
               chrX:48536724-48536898 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               137
               

               Alignm E-value:
               9e-33
               

               Alignm gaps (pig, cow):
               70, 136
               

               Conread position:
               1-176
               

               Cow position:
               chrX:28866061-28866228 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               134
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               51, 0
               

               Conread position:
               1-176
               

               Cow position:
               chrX:35268820-35268654 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               140
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               58, 0
               

               Conread position:
               1-177
               

               Cow position:
               chrX:40647924-40647741 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               146
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               47, 152
               

               Conread position:
               2-172
               

               Cow position:
               chrX:35413557-35413400 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               136
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               52, 0
               

               Conread position:
               4-172
               

               Cow position:
               chrX:31436413-31436248 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               134
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               125, 73
Conread position:	1-105
Cow position:	chr1:89083028-89082921 (view UCSC Genome Browser custom track)
Alignm length:	108
Alignm identity:	91
Alignm E-value:	7e-24
Alignm gaps (pig, cow):	70, 0
Conread position:	1-140
Cow position:	chr1:26702289-26702429 (view UCSC Genome Browser custom track)
Alignm length:	141
Alignm identity:	110
Alignm E-value:	3e-27
Alignm gaps (pig, cow):	44, 0
Conread position:	1-145
Cow position:	chr1:20288036-20287888 (view UCSC Genome Browser custom track)
Alignm length:	149
Alignm identity:	114
Alignm E-value:	9e-26
Alignm gaps (pig, cow):	78, 0
Conread position:	1-148
Cow position:	chr1:68951545-68951402 (view UCSC Genome Browser custom track)
Alignm length:	148
Alignm identity:	112
Alignm E-value:	2e-24
Alignm gaps (pig, cow):	76, 0
Conread position:	1-170
Cow position:	chr1:98708358-98708192 (view UCSC Genome Browser custom track)
Alignm length:	170
Alignm identity:	132
Alignm E-value:	6e-33
Alignm gaps (pig, cow):	62, 0
Conread position:	1-171
Cow position:	chr1:99642448-99642621 (view UCSC Genome Browser custom track)
Alignm length:	175
Alignm identity:	132
Alignm E-value:	1e-28
Alignm gaps (pig, cow):	69, 144
Conread position:	1-172
Cow position:	chr1:10778484-10778322 (view UCSC Genome Browser custom track)
Alignm length:	172
Alignm identity:	135
Alignm E-value:	5e-31
Alignm gaps (pig, cow):	58, 0
Conread position:	1-176
Cow position:	chr1:97806706-97806536 (view UCSC Genome Browser custom track)
Alignm length:	176
Alignm identity:	137
Alignm E-value:	7e-34
Alignm gaps (pig, cow):	106, 0
Conread position:	1-184
Cow position:	chr1:19545181-19545359 (view UCSC Genome Browser custom track)
Alignm length:	185
Alignm identity:	151
Alignm E-value:	4.99997e-41
Alignm gaps (pig, cow):	70, 144
Conread position:	1-210
Cow position:	chr1:69678404-69678613 (view UCSC Genome Browser custom track)
Alignm length:	215
Alignm identity:	160
Alignm E-value:	2e-33
Alignm gaps (pig, cow):	74, 147
Conread position:	4-149
Cow position:	chr1:4293970-4293832 (view UCSC Genome Browser custom track)
Alignm length:	146
Alignm identity:	115
Alignm E-value:	9e-26
Alignm gaps (pig, cow):	40, 0
Conread position:	4-176
Cow position:	chr1:56229166-56228998 (view UCSC Genome Browser custom track)
Alignm length:	173
Alignm identity:	137
Alignm E-value:	3e-35
Alignm gaps (pig, cow):	55, 0
Conread position:	5-160
Cow position:	chr1:70434917-70434752 (view UCSC Genome Browser custom track)
Alignm length:	166
Alignm identity:	133
Alignm E-value:	2e-31
Alignm gaps (pig, cow):	70, 0
Conread position:	5-177
Cow position:	chr1:47008945-47008770 (view UCSC Genome Browser custom track)
Alignm length:	176
Alignm identity:	132
Alignm E-value:	5e-30
Alignm gaps (pig, cow):	54, 0
Conread position:	1-125
Cow position:	chr10:25882310-25882189 (view UCSC Genome Browser custom track)
Alignm length:	125
Alignm identity:	100
Alignm E-value:	5e-24
Alignm gaps (pig, cow):	37, 0
Conread position:	1-133
Cow position:	chr10:64041972-64041838 (view UCSC Genome Browser custom track)
Alignm length:	137
Alignm identity:	110
Alignm E-value:	2e-25
Alignm gaps (pig, cow):	67, 45
Conread position:	1-155
Cow position:	chr10:35715821-35715976 (view UCSC Genome Browser custom track)
Alignm length:	157
Alignm identity:	131
Alignm E-value:	2e-38
Alignm gaps (pig, cow):	70, 145
Conread position:	1-156
Cow position:	chr10:24732201-24732043 (view UCSC Genome Browser custom track)
Alignm length:	160
Alignm identity:	130
Alignm E-value:	5e-35
Alignm gaps (pig, cow):	63, 147
Conread position:	1-160
Cow position:	chr10:48377753-48377917 (view UCSC Genome Browser custom track)
Alignm length:	165
Alignm identity:	133
Alignm E-value:	5e-35
Alignm gaps (pig, cow):	62, 0
Conread position:	1-173
Cow position:	chr10:53357786-53357613 (view UCSC Genome Browser custom track)
Alignm length:	178
Alignm identity:	136
Alignm E-value:	9e-29
Alignm gaps (pig, cow):	58, 37