• Home
• Research
• Resources
• Publications
• About
• People
• Events
• Jobs
• News
• Contact

Cow genome map

           
Conread name:
           
LyN1-MLN01A070044
        

               
Conread position:
               
1-383
               

               
Cow position:
               
chr1:31039213-31039586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
295, 26
               

               
Conread position:
               
1-387
               

               
Cow position:
               
chr1:29901365-29901761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 193
               

               
Conread position:
               
1-387
               

               
Cow position:
               
chr1:99571713-99572093 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
328, 69
               

               
Conread position:
               
1-387
               

               
Cow position:
               
chr1:102552854-102552480 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
288, 69
               

               
Conread position:
               
5-405
               

               
Cow position:
               
chr1:30785666-30786069 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
314, 70
               

               
Conread position:
               
7-386
               

               
Cow position:
               
chr1:92433636-92433260 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
286, 72
               

               
Conread position:
               
8-391
               

               
Cow position:
               
chr1:30531159-30531551 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
168, 62
               

               
Conread position:
               
8-391
               

               
Cow position:
               
chr1:80063165-80062789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
284, 44
               

               
Conread position:
               
8-391
               

               
Cow position:
               
chr1:88298084-88297693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
284, 62
               

               
Conread position:
               
11-391
               

               
Cow position:
               
chr1:40089238-40088849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
211, 59
               

               
Conread position:
               
13-391
               

               
Cow position:
               
chr1:7197210-7196827 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
261, 57
               

               
Conread position:
               
39-386
               

               
Cow position:
               
chr1:85338696-85338339 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
234, 87
               

               
Conread position:
               
45-386
               

               
Cow position:
               
chr1:16573107-16573447 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
189, 14
               

               
Conread position:
               
137-391
               

               
Cow position:
               
chr1:13438843-13438592 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
10, 47
               

               
Conread position:
               
1-377
               

               
Cow position:
               
chr10:22632429-22632795 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
291, 36
               

               
Conread position:
               
1-386
               

               
Cow position:
               
chr10:26145780-26146164 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
149, 15
               

               
Conread position:
               
1-391
               

               
Cow position:
               
chr10:11111154-11110757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
292, 66
               

               
Conread position:
               
1-405
               

               
Cow position:
               
chr10:47618354-47618751 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
15, 28
               

               
Conread position:
               
7-391
               

               
Cow position:
               
chr10:2612970-2612581 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
271, 67
               

               
Conread position:
               
9-387
               

               
Cow position:
               
chr10:63627028-63626640 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
295, 67
               

               
Conread position:
               
11-386
               

               
Cow position:
               
chr10:24308314-24308677 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
282, 68
               

               
Conread position:
               
11-391
               

               
Cow position:
               
chr10:28775722-28775333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
111, 65
               

               
Conread position:
               
11-405
               

               
Cow position:
               
chr10:44202816-44203218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 65
               

               
Conread position:
               
55-386
               

               
Cow position:
               
chr10:53062648-53062982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
237, 128
               

               
Conread position:
               
59-385
               

               
Cow position:
               
chr10:37913621-37913952 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
147, 11
               

               
Conread position:
               
108-387
               

               
Cow position:
               
chr10:22617254-22617534 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
184, 23
               

               
Conread position:
               
117-403
               

               
Cow position:
               
chr10:32582259-32581973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
175, 66
               

               
Conread position:
               
156-386
               

               
Cow position:
               
chr10:24973911-24974148 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
19, 48
               

               
Conread position:
               
183-394
               

               
Cow position:
               
chr10:29091420-29091643 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
112, 20
               

               
Conread position:
               
1-386
               

               
Cow position:
               
chr11:42358720-42358332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
243, 53
               

               
Conread position:
               
1-391
               

               
Cow position:
               
chr11:26067584-26067974 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
241, 75
               

               
Conread position:
               
9-386
               

               
Cow position:
               
chr11:17781506-17781890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 67
               

               
Conread position:
               
11-387
               

               
Cow position:
               
chr11:31885098-31884728 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
119, 65
               

               
Conread position:
               
43-387
               

               
Cow position:
               
chr11:37346425-37346083 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
238, 33
               

               
Conread position:
               
76-387
               

               
Cow position:
               
chr11:27666609-27666913 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
190, 92
               

               
Conread position:
               
213-412
               

               
Cow position:
               
chr11:57624850-57625053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
79, 67
               

               
Conread position:
               
1-386
               

               
Cow position:
               
chr12:747812-747422 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
9e-39
               

               
Alignm gaps (pig, cow):
               
269, 75
               

               
Conread position:
               
1-386
               

               
Cow position:
               
chr12:19040041-19040434 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
288, 75
               

               
Conread position:
               
1-387
               

               
Cow position:
               
chr12:21075643-21075251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
292, 66
               

               
Conread position:
               
5-386
               

               
Cow position:
               
chr12:22451184-22450798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
273, 9
               

               
Conread position:
               
8-391
               

               
Cow position:
               
chr12:2967742-2967368 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
284, 59
               

               
Conread position:
               
11-391
               

               
Cow position:
               
chr12:31260617-31260990 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
281, 59
               

               
Conread position:
               
19-391
               

               
Cow position:
               
chr12:45541175-45540813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
25, 90
               

               
Conread position:
               
40-391
               

               
Cow position:
               
chr12:21946772-21946408 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 153
               

               
Conread position:
               
51-391
               

               
Cow position:
               
chr12:19873331-19872988 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
242, 19
               

               
Conread position:
               
127-391
               

               
Cow position:
               
chr12:25143052-25143309 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
164, 52
               

               
Conread position:
               
1-380
               

               
Cow position:
               
chr13:10859570-10859188 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
5, 78
               

               
Conread position:
               
1-386
               

               
Cow position:
               
chr13:46182144-46182527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
291, 68
               

               
Conread position:
               
8-391
               

               
Cow position:
               
chr13:3650693-3651075 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
284, 62
               

               
Conread position:
               
8-391
               

               
Cow position:
               
chr13:32550354-32549981 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
284, 62
               

               
Conread position:
               
17-387
               

               
Cow position:
               
chr13:33351989-33351636 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
142, 30
               

               
Conread position:
               
64-384
               

               
Cow position:
               
chr13:25892100-25891782 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
231, 28
               

               
Conread position:
               
1-386
               

               
Cow position:
               
chr14:35354734-35355121 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
9, 47
               

               
Conread position:
               
1-386
               

               
Cow position:
               
chr14:42849129-42849515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
230, 69
               

               
Conread position:
               
1-387
               

               
Cow position:
               
chr14:46489828-46489439 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
181, 53
               

               
Conread position:
               
1-391
               

               
Cow position:
               
chr14:38017021-38016631 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
220, 69
               

               
Conread position:
               
1-391
               

               
Cow position:
               
chr14:43561655-43561273 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
320, 75
               

               
Conread position:
               
2-387
               

               
Cow position:
               
chr14:4991691-4992080 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
282, 74
               

               
Conread position:
               
5-386
               

               
Cow position:
               
chr14:24989821-24990196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
288, 69
               

               
Conread position:
               
5-391
               

               
Cow position:
               
chr14:46224101-46224490 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
288, 62
               

               
Conread position:
               
9-357
               

               
Cow position:
               
chr14:42154299-42153955 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
9-387
               

               
Cow position:
               
chr14:17899909-17900293 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 153
               

               
Conread position:
               
17-385
               

               
Cow position:
               
chr14:44887603-44887982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
143, 135
               

               
Conread position:
               
29-386
               

               
Cow position:
               
chr14:47593794-47593439 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
251, 30
               

               
Conread position:
               
221-387
               

               
Cow position:
               
chr14:28117307-28117142 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
29-412
               

               
Cow position:
               
chr15:22453805-22454203 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
109, 52
               

               
Conread position:
               
48-386
               

               
Cow position:
               
chr15:12440160-12439816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
245, 127
               

               
Conread position:
               
85-386
               

               
Cow position:
               
chr15:2800524-2800835 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 109
               

               
Conread position:
               
193-387
               

               
Cow position:
               
chr15:8046798-8046605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
112, 87
               

               
Conread position:
               
198-387
               

               
Cow position:
               
chr15:4787512-4787712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
87, 34
               

               
Conread position:
               
207-387
               

               
Cow position:
               
chr15:9868882-9868695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
1-386
               

               
Cow position:
               
chr16:41576365-41575985 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
1-387
               

               
Cow position:
               
chr16:29158746-29158353 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
294, 75
               

               
Conread position:
               
1-392
               

               
Cow position:
               
chr16:47017622-47018019 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
286, 69
               

               
Conread position:
               
5-391
               

               
Cow position:
               
chr16:34409014-34409403 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
39, 177
               

               
Conread position:
               
8-390
               

               
Cow position:
               
chr16:25454340-25454723 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
284, 59
               

               
Conread position:
               
9-391
               

               
Cow position:
               
chr16:5746969-5747366 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
6.02558e-44
               

               
Alignm gaps (pig, cow):
               
35, 59
               

               
Conread position:
               
50-387
               

               
Cow position:
               
chr16:30143874-30144210 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
246, 20
               

               
Conread position:
               
85-381
               

               
Cow position:
               
chr16:49529047-49529335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
208, 98
               

               
Conread position:
               
137-391
               

               
Cow position:
               
chr16:3027420-3027169 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
156, 22
               

               
Conread position:
               
199-380
               

               
Cow position:
               
chr16:48659291-48659104 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
96, 44
               

               
Conread position:
               
1-387
               

               
Cow position:
               
chr17:31427434-31427044 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
72, 143
               

               
Conread position:
               
8-391
               

               
Cow position:
               
chr17:40811415-40811040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
284, 62
               

               
Conread position:
               
10-384
               

               
Cow position:
               
chr17:23337368-23337748 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
171, 66
               

               
Conread position:
               
10-386
               

               
Cow position:
               
chr17:144519-144905 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
25, 38
               

               
Conread position:
               
29-380
               

               
Cow position:
               
chr17:2151818-2151469 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
264, 50
               

               
Conread position:
               
61-386
               

               
Cow position:
               
chr17:2699174-2698855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
259, 98
               

               
Conread position:
               
1-380
               

               
Cow position:
               
chr18:32280875-32280498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
5, 70
               

               
Conread position:
               
1-386
               

               
Cow position:
               
chr18:13508161-13508543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
213, 76
               

               
Conread position:
               
1-386
               

               
Cow position:
               
chr18:28929516-28929914 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
107, 75
               

               
Conread position:
               
1-386
               

               
Cow position:
               
chr18:47183703-47184092 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 27
               

               
Conread position:
               
1-387
               

               
Cow position:
               
chr18:27457172-27457559 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
122, 66
               

               
Conread position:
               
1-387
               

               
Cow position:
               
chr18:35057929-35057549 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
113, 69
               

               
Conread position:
               
1-396
               

               
Cow position:
               
chr18:54274842-54274451 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
278, 69
               

               
Conread position:
               
1-401
               

               
Cow position:
               
chr18:29224226-29223823 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 9
               

               
Conread position:
               
9-389
               

               
Cow position:
               
chr18:33158442-33158058 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
284, 19
               

               
Conread position:
               
54-387
               

               
Cow position:
               
chr18:39494645-39494310 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
6.02558e-44
               

               
Alignm gaps (pig, cow):
               
248, 22
               

               
Conread position:
               
199-376
               

               
Cow position:
               
chr18:44229510-44229694 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
87, 26
               

               
Conread position:
               
5-386
               

               
Cow position:
               
chr19:29627773-29628159 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
205, 71
               

               
Conread position:
               
8-391
               

               
Cow position:
               
chr19:4460815-4461186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 63
               

               
Conread position:
               
28-386
               

               
Cow position:
               
chr19:26976434-26976783 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
256, 42
               

               
Conread position:
               
118-386
               

               
Cow position:
               
chr19:7065475-7065209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
175, 77
               

               
Conread position:
               
1-386
               

               
Cow position:
               
chr2:4254930-4255309 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
279, 26
               

               
Conread position:
               
1-387
               

               
Cow position:
               
chr2:42192064-42191671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 184
               

               
Conread position:
               
1-391
               

               
Cow position:
               
chr2:38830958-38831353 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
278, 78
               

               
Conread position:
               
2-387
               

               
Cow position:
               
chr2:56076679-56076306 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
290, 68
               

               
Conread position:
               
5-387
               

               
Cow position:
               
chr2:24882636-24882263 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
156, 67
               

               
Conread position:
               
9-387
               

               
Cow position:
               
chr2:28654139-28654527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
287, 70
               

               
Conread position:
               
22-357
               

               
Cow position:
               
chr2:56797657-56797984 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
267, 25
               

               
Conread position:
               
54-391
               

               
Cow position:
               
chr2:907743-907394 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
69, 7
               

               
Conread position:
               
117-385
               

               
Cow position:
               
chr2:43609751-43610018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
234, 63
               

               
Conread position:
               
174-405
               

               
Cow position:
               
chr2:24432834-24432589 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
183-386
               

               
Cow position:
               
chr2:73992915-73992700 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
110, 0
               

               
Conread position:
               
1-386
               

               
Cow position:
               
chr20:7803554-7803945 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
303, 131
               

               
Conread position:
               
1-387
               

               
Cow position:
               
chr20:28282975-28282570 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
153, 75
               

               
Conread position:
               
94-387
               

               
Cow position:
               
chr20:7568195-7568480 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
164, 89
               

               
Conread position:
               
102-387
               

               
Cow position:
               
chr20:7592689-7592966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
156, 81
               

               
Conread position:
               
197-387
               

               
Cow position:
               
chr20:6096974-6097177 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
1-387
               

               
Cow position:
               
chr21:24297085-24297471 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
40, 19
               

               
Conread position:
               
1-391
               

               
Cow position:
               
chr21:9711037-9711440 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
134, 78
               

               
Conread position:
               
1-391
               

               
Cow position:
               
chr21:17208173-17207777 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
217, 66
               

               
Conread position:
               
1-391
               

               
Cow position:
               
chr21:20243610-20244001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
25, 40
               

               
Conread position:
               
8-391
               

               
Cow position:
               
chr21:10571271-10570886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 42
               

               
Conread position:
               
51-386
               

               
Cow position:
               
chr21:5596731-5596394 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
230, 29
               

               
Conread position:
               
58-405
               

               
Cow position:
               
chr21:40267487-40267847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
184, 12
               

               
Conread position:
               
86-405
               

               
Cow position:
               
chr21:26979-26669 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
17, 86
               

               
Conread position:
               
189-391
               

               
Cow position:
               
chr21:13199742-13199524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
91, 0
               

               
Conread position:
               
1-376
               

               
Cow position:
               
chr22:5015914-5015538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 37
               

               
Conread position:
               
1-380
               

               
Cow position:
               
chr22:41388221-41387840 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
290, 65
               

               
Conread position:
               
1-386
               

               
Cow position:
               
chr22:21363781-21364152 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
1-386
               

               
Cow position:
               
chr22:22160328-22159945 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
240, 78
               

               
Conread position:
               
1-387
               

               
Cow position:
               
chr22:13720922-13721311 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 185
               

               
Conread position:
               
1-392
               

               
Cow position:
               
chr22:36193480-36193079 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
292, 75
               

               
Conread position:
               
9-386
               

               
Cow position:
               
chr22:12892998-12893377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
82, 50
               

               
Conread position:
               
9-387
               

               
Cow position:
               
chr22:92758-93123 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
63, 68
               

               
Conread position:
               
23-387
               

               
Cow position:
               
chr22:30963699-30963329 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
270, 44
               

               
Conread position:
               
76-391
               

               
Cow position:
               
chr22:11987960-11988279 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
216, 32
               

               
Conread position:
               
183-387
               

               
Cow position:
               
chr22:38553873-38553663 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
109, 98
               

               
Conread position:
               
1-405
               

               
Cow position:
               
chr23:6441256-6441658 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
9, 27
               

               
Conread position:
               
12-387
               

               
Cow position:
               
chr23:40553324-40553699 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
280, 58
               

               
Conread position:
               
13-391
               

               
Cow position:
               
chr23:12864504-12864118 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
285, 57
               

               
Conread position:
               
23-391
               

               
Cow position:
               
chr23:12978545-12978173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
270, 160
               

               
Conread position:
               
1-387
               

               
Cow position:
               
chr24:14913953-14914325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
53, 78
               

               
Conread position:
               
1-387
               

               
Cow position:
               
chr24:45216525-45216914 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
191, 78
               

               
Conread position:
               
1-390
               

               
Cow position:
               
chr24:30768309-30767904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 76
               

               
Conread position:
               
1-405
               

               
Cow position:
               
chr24:22821582-22821188 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
303, 73
               

               
Conread position:
               
5-385
               

               
Cow position:
               
chr24:39258728-39258360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
256, 18
               

               
Conread position:
               
8-391
               

               
Cow position:
               
chr24:17544049-17544432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
272, 62
               

               
Conread position:
               
88-386
               

               
Cow position:
               
chr24:28689232-28688928 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
116, 95
               

               
Conread position:
               
89-386
               

               
Cow position:
               
chr24:19644093-19643805 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
253, 90
               

               
Conread position:
               
90-391
               

               
Cow position:
               
chr24:20368175-20367875 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
202, 93
               

               
Conread position:
               
1-391
               

               
Cow position:
               
chr25:25480019-25480401 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
11, 192
               

               
Conread position:
               
29-389
               

               
Cow position:
               
chr25:14393520-14393883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
29, 33
               

               
Conread position:
               
62-405
               

               
Cow position:
               
chr25:18270008-18269670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
234, 93
               

               
Conread position:
               
7-386
               

               
Cow position:
               
chr26:9867505-9867875 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
267, 49
               

               
Conread position:
               
5-386
               

               
Cow position:
               
chr27:11630087-11630476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
288, 69
               

               
Conread position:
               
9-387
               

               
Cow position:
               
chr27:1502314-1501937 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
324, 67
               

               
Conread position:
               
198-391
               

               
Cow position:
               
chr27:4982996-4982792 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
94, 83
               

               
Conread position:
               
1-391
               

               
Cow position:
               
chr28:16182224-16181834 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 70
               

               
Conread position:
               
1-392
               

               
Cow position:
               
chr28:7807793-7807415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
146, 48
               

               
Conread position:
               
1-403
               

               
Cow position:
               
chr28:7336854-7336460 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 70
               

               
Conread position:
               
8-391
               

               
Cow position:
               
chr28:1213936-1214315 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 70
               

               
Conread position:
               
8-391
               

               
Cow position:
               
chr28:1811128-1811518 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
284, 62
               

               
Conread position:
               
23-386
               

               
Cow position:
               
chr28:13725763-13725402 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
95, 36
               

               
Conread position:
               
30-389
               

               
Cow position:
               
chr28:11543683-11544042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
30, 47
               

               
Conread position:
               
35-387
               

               
Cow position:
               
chr28:5817442-5817091 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
184, 41
               

               
Conread position:
               
180-385
               

               
Cow position:
               
chr28:16543033-16543237 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
101, 39
               

               
Conread position:
               
10-387
               

               
Cow position:
               
chr29:27814612-27814228 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
294, 57
               

               
Conread position:
               
10-392
               

               
Cow position:
               
chr29:24578457-24578087 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 18
               

               
Conread position:
               
85-404
               

               
Cow position:
               
chr29:35228432-35228120 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
80, 51
               

               
Conread position:
               
87-391
               

               
Cow position:
               
chr29:10158997-10159304 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
202, 14
               

               
Conread position:
               
184-387
               

               
Cow position:
               
chr29:13128989-13129202 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
108, 22
               

               
Conread position:
               
1-386
               

               
Cow position:
               
chr3:9639271-9639658 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
229, 69
               

               
Conread position:
               
1-386
               

               
Cow position:
               
chr3:21302840-21303229 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
294, 75
               

               
Conread position:
               
1-386
               

               
Cow position:
               
chr3:34086473-34086847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
291, 75
               

               
Conread position:
               
1-386
               

               
Cow position:
               
chr3:64171996-64171595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 190
               

               
Conread position:
               
1-387
               

               
Cow position:
               
chr3:34556630-34557023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
294, 74
               

               
Conread position:
               
5-386
               

               
Cow position:
               
chr3:21025670-21026055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
84, 71
               

               
Conread position:
               
5-405
               

               
Cow position:
               
chr3:18996972-18996552 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
55, 72
               

               
Conread position:
               
7-400
               

               
Cow position:
               
chr3:72131717-72132106 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
285, 60
               

               
Conread position:
               
11-386
               

               
Cow position:
               
chr3:63177089-63176703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
268, 59
               

               
Conread position:
               
11-391
               

               
Cow position:
               
chr3:37020474-37020865 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
281, 59
               

               
Conread position:
               
55-386
               

               
Cow position:
               
chr3:25057370-25057036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
237, 128
               

               
Conread position:
               
79-391
               

               
Cow position:
               
chr3:39857364-39857049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
213, 104
               

               
Conread position:
               
88-391
               

               
Cow position:
               
chr3:30321914-30321607 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
204, 61
               

               
Conread position:
               
117-386
               

               
Cow position:
               
chr3:12672754-12673023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
176, 66
               

               
Conread position:
               
169-387
               

               
Cow position:
               
chr3:77271952-77272155 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
133, 14
               

               
Conread position:
               
229-386
               

               
Cow position:
               
chr3:33692942-33692775 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
64, 51
               

               
Conread position:
               
245-391
               

               
Cow position:
               
chr3:67545134-67545289 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
7, 36
               

               
Conread position:
               
1-386
               

               
Cow position:
               
chr4:30004445-30004831 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
303, 182
               

               
Conread position:
               
1-386
               

               
Cow position:
               
chr4:34181201-34181589 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
298, 75
               

               
Conread position:
               
1-386
               

               
Cow position:
               
chr4:39646302-39645916 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 53
               

               
Conread position:
               
1-386
               

               
Cow position:
               
chr4:45499710-45499332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
279, 31
               

               
Conread position:
               
1-387
               

               
Cow position:
               
chr4:36755324-36754944 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
292, 75
               

               
Conread position:
               
1-390
               

               
Cow position:
               
chr4:11872306-11872693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
257, 75
               

               
Conread position:
               
2-379
               

               
Cow position:
               
chr4:22905239-22904857 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
291, 74
               

               
Conread position:
               
7-385
               

               
Cow position:
               
chr4:64039718-64039369 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
339, 18
               

               
Conread position:
               
7-386
               

               
Cow position:
               
chr4:48152769-48153149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
272, 69
               

               
Conread position:
               
9-387
               

               
Cow position:
               
chr4:46526599-46526233 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
239, 70
               

               
Conread position:
               
13-391
               

               
Cow position:
               
chr4:6265682-6266060 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
239, 54
               

               
Conread position:
               
35-386
               

               
Cow position:
               
chr4:21056764-21056398 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
97, 41
               

               
Conread position:
               
54-386
               

               
Cow position:
               
chr4:33180787-33181125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
238, 22
               

               
Conread position:
               
107-391
               

               
Cow position:
               
chr4:67383724-67383433 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
185, 76
               

               
Conread position:
               
183-391
               

               
Cow position:
               
chr4:23303971-23304185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
97, 48
               

               
Conread position:
               
1-391
               

               
Cow position:
               
chr5:16085156-16085554 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
40, 36
               

               
Conread position:
               
1-395
               

               
Cow position:
               
chr5:55684764-55684369 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
222, 39
               

               
Conread position:
               
11-386
               

               
Cow position:
               
chr5:26467252-26466885 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
269, 65
               

               
Conread position:
               
40-386
               

               
Cow position:
               
chr5:32697184-32697531 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
255, 39
               

               
Conread position:
               
85-385
               

               
Cow position:
               
chr5:32938036-32937730 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
207, 92
               

               
Conread position:
               
88-386
               

               
Cow position:
               
chr5:70402434-70402129 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
207, 66
               

               
Conread position:
               
1-386
               

               
Cow position:
               
chr6:15962144-15962525 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 79
               

               
Conread position:
               
1-391
               

               
Cow position:
               
chr6:25789933-25790322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
252, 182
               

               
Conread position:
               
1-391
               

               
Cow position:
               
chr6:54886810-54887198 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 70
               

               
Conread position:
               
2-391
               

               
Cow position:
               
chr6:44098484-44098100 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
144, 65
               

               
Conread position:
               
9-386
               

               
Cow position:
               
chr6:35703742-35704117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
202, 15
               

               
Conread position:
               
17-392
               

               
Cow position:
               
chr6:47381458-47381076 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
7.00649e-44
               

               
Alignm gaps (pig, cow):
               
248, 53
               

               
Conread position:
               
41-386
               

               
Cow position:
               
chr6:15181888-15181557 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
254, 29
               

               
Conread position:
               
199-387
               

               
Cow position:
               
chr6:18969581-18969779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
94, 81
               

               
Conread position:
               
1-385
               

               
Cow position:
               
chr7:21009301-21009677 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
1-386
               

               
Cow position:
               
chr7:12659339-12659725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
336, 182
               

               
Conread position:
               
1-387
               

               
Cow position:
               
chr7:25195170-25194797 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
280, 69
               

               
Conread position:
               
8-391
               

               
Cow position:
               
chr7:13530040-13530419 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
284, 66
               

               
Conread position:
               
8-391
               

               
Cow position:
               
chr7:13855071-13854703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
27, 33
               

               
Conread position:
               
8-391
               

               
Cow position:
               
chr7:24804632-24805006 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
322, 59
               

               
Conread position:
               
9-387
               

               
Cow position:
               
chr7:44621536-44621918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 63
               

               
Conread position:
               
10-387
               

               
Cow position:
               
chr7:24764235-24764619 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
220, 38
               

               
Conread position:
               
11-387
               

               
Cow position:
               
chr7:64573455-64573836 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 178
               

               
Conread position:
               
11-391
               

               
Cow position:
               
chr7:61576282-61576648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
224, 59
               

               
Conread position:
               
11-396
               

               
Cow position:
               
chr7:39131612-39131986 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
277, 65
               

               
Conread position:
               
13-403
               

               
Cow position:
               
chr7:52761644-52762033 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
279, 170
               

               
Conread position:
               
14-421
               

               
Cow position:
               
chr7:249844-250240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
197, 24
               

               
Conread position:
               
72-386
               

               
Cow position:
               
chr7:63379059-63379386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
109, 22
               

               
Conread position:
               
87-385
               

               
Cow position:
               
chr7:60489577-60489271 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
7, 91
               

               
Conread position:
               
99-386
               

               
Cow position:
               
chr7:68529390-68529096 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
234, 48
               

               
Conread position:
               
178-387
               

               
Cow position:
               
chr7:59877483-59877266 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
102, 0
               

               
Conread position:
               
1-386
               

               
Cow position:
               
chr8:46214432-46214819 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
31, 74
               

               
Conread position:
               
1-387
               

               
Cow position:
               
chr8:53003836-53004218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
278, 69
               

               
Conread position:
               
1-391
               

               
Cow position:
               
chr8:48955536-48955138 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
128, 66
               

               
Conread position:
               
1-392
               

               
Cow position:
               
chr8:18207617-18207985 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
213, 33
               

               
Conread position:
               
2-386
               

               
Cow position:
               
chr8:12779216-12779598 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
282, 153
               

               
Conread position:
               
4-380
               

               
Cow position:
               
chr8:39461686-39461301 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
143, 73
               

               
Conread position:
               
5-386
               

               
Cow position:
               
chr8:27561113-27561492 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
291, 22
               

               
Conread position:
               
8-390
               

               
Cow position:
               
chr8:38561389-38561773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
284, 62
               

               
Conread position:
               
9-388
               

               
Cow position:
               
chr8:16414318-16413956 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
138, 58
               

               
Conread position:
               
11-410
               

               
Cow position:
               
chr8:50988452-50988846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
269, 59
               

               
Conread position:
               
43-387
               

               
Cow position:
               
chr8:26394661-26394306 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
238, 33
               

               
Conread position:
               
76-387
               

               
Cow position:
               
chr8:29919951-29920278 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
117, 208
               

               
Conread position:
               
1-386
               

               
Cow position:
               
chr9:22361428-22361823 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
292, 75
               

               
Conread position:
               
1-387
               

               
Cow position:
               
chr9:10634607-10634241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
222, 37
               

               
Conread position:
               
1-406
               

               
Cow position:
               
chr9:1984091-1983677 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
292, 75
               

               
Conread position:
               
19-387
               

               
Cow position:
               
chr9:44517994-44518372 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
274, 61
               

               
Conread position:
               
54-386
               

               
Cow position:
               
chr9:5839462-5839807 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
179, 123
               

               
Conread position:
               
69-387
               

               
Cow position:
               
chr9:30804055-30803725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
113, 48
               

               
Conread position:
               
79-408
               

               
Cow position:
               
chr9:33845656-33845322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
200, 75
               

               
Conread position:
               
1-386
               

               
Cow position:
               
chrX:2648721-2649113 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 25
               

               
Conread position:
               
1-387
               

               
Cow position:
               
chrX:34222390-34222001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
230, 24
               

               
Conread position:
               
8-391
               

               
Cow position:
               
chrX:36794628-36794241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
288, 59
               

               
Conread position:
               
9-391
               

               
Cow position:
               
chrX:41879297-41879684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
284, 67
               

               
Conread position:
               
13-391
               

               
Cow position:
               
chrX:671380-671761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 57
               

               
Conread position:
               
30-387
               

               
Cow position:
               
chrX:19127637-19127980 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
353, 40
               

               
Conread position:
               
50-391
               

               
Cow position:
               
chrX:833241-833572 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
142, 32
               

               
Conread position:
               
88-387
               

               
Cow position:
               
chrX:1947404-1947714 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
205, 95
               

               
Conread position:
               
224-398
               

               
Cow position:
               
chrX:22819477-22819302 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
76, 56