Cow genome map
| Conread name: | LyN1-MLN01A110033 |
| Conread position: | 137-597 |
| Cow position: | chr1:41780444-41780926 (view UCSC Genome Browser custom track) |
| Alignm length: | 492 |
| Alignm identity: | 322 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 19, 59 |
| Conread position: | 138-595 |
| Cow position: | chr1:101671696-101672152 (view UCSC Genome Browser custom track) |
| Alignm length: | 470 |
| Alignm identity: | 300 |
| Alignm E-value: | 9e-33 |
| Alignm gaps (pig, cow): | 31, 56 |
| Conread position: | 142-596 |
| Cow position: | chr1:44973950-44973506 (view UCSC Genome Browser custom track) |
| Alignm length: | 459 |
| Alignm identity: | 301 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 218, 48 |
| Conread position: | 138-597 |
| Cow position: | chr10:51780762-51781230 (view UCSC Genome Browser custom track) |
| Alignm length: | 484 |
| Alignm identity: | 353 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 221 |
| Conread position: | 142-597 |
| Cow position: | chr10:20538988-20538520 (view UCSC Genome Browser custom track) |
| Alignm length: | 483 |
| Alignm identity: | 332 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 126 |
| Conread position: | 222-597 |
| Cow position: | chr10:42390502-42390869 (view UCSC Genome Browser custom track) |
| Alignm length: | 387 |
| Alignm identity: | 280 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 144, 41 |
| Conread position: | 374-596 |
| Cow position: | chr10:32829871-32829652 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 159 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 95, 28 |
| Conread position: | 142-593 |
| Cow position: | chr11:31928483-31928024 (view UCSC Genome Browser custom track) |
| Alignm length: | 465 |
| Alignm identity: | 323 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 220, 151 |
| Conread position: | 229-597 |
| Cow position: | chr11:72590194-72589826 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 234 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 90, 64 |
| Conread position: | 348-597 |
| Cow position: | chr11:31864185-31863928 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 189 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 14, 57 |
| Conread position: | 142-608 |
| Cow position: | chr12:24432298-24432765 (view UCSC Genome Browser custom track) |
| Alignm length: | 478 |
| Alignm identity: | 325 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 220, 153 |
| Conread position: | 360-612 |
| Cow position: | chr13:12566297-12566555 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 186 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 144, 48 |
| Conread position: | 380-593 |
| Cow position: | chr13:36716440-36716212 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 162 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 139, 0 |
| Conread position: | 144-620 |
| Cow position: | chr14:45236767-45236297 (view UCSC Genome Browser custom track) |
| Alignm length: | 481 |
| Alignm identity: | 349 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 219, 148 |
| Conread position: | 343-597 |
| Cow position: | chr14:34054048-34053789 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 196 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 17, 66 |
| Conread position: | 139-597 |
| Cow position: | chr15:49196119-49195661 (view UCSC Genome Browser custom track) |
| Alignm length: | 469 |
| Alignm identity: | 285 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 86, 9 |
| Conread position: | 142-606 |
| Cow position: | chr15:8753139-8752679 (view UCSC Genome Browser custom track) |
| Alignm length: | 483 |
| Alignm identity: | 329 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 18 |
| Conread position: | 328-597 |
| Cow position: | chr15:42318725-42318991 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 196 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 90, 37 |
| Conread position: | 142-586 |
| Cow position: | chr16:5891917-5891471 (view UCSC Genome Browser custom track) |
| Alignm length: | 460 |
| Alignm identity: | 316 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 220, 110 |
| Conread position: | 248-597 |
| Cow position: | chr16:43845413-43845771 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 263 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 86, 7 |
| Conread position: | 373-612 |
| Cow position: | chr16:25742552-25742310 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 177 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 38, 76 |
| Conread position: | 142-597 |
| Cow position: | chr17:2005559-2005124 (view UCSC Genome Browser custom track) |
| Alignm length: | 471 |
| Alignm identity: | 329 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 220, 51 |
| Conread position: | 142-612 |
| Cow position: | chr17:8204406-8203934 (view UCSC Genome Browser custom track) |
| Alignm length: | 484 |
| Alignm identity: | 337 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 178, 151 |
| Conread position: | 378-589 |
| Cow position: | chr17:19367901-19367675 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 159 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 95, 87 |
| Conread position: | 138-596 |
| Cow position: | chr18:38090657-38091116 (view UCSC Genome Browser custom track) |
| Alignm length: | 477 |
| Alignm identity: | 341 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 90, 48 |
| Conread position: | 142-589 |
| Cow position: | chr18:32165237-32165685 (view UCSC Genome Browser custom track) |
| Alignm length: | 457 |
| Alignm identity: | 316 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 406, 51 |
| Conread position: | 138-600 |
| Cow position: | chr2:54727931-54728400 (view UCSC Genome Browser custom track) |
| Alignm length: | 478 |
| Alignm identity: | 337 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 229, 105 |
| Conread position: | 142-597 |
| Cow position: | chr2:44932877-44933342 (view UCSC Genome Browser custom track) |
| Alignm length: | 473 |
| Alignm identity: | 322 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 170, 151 |
| Conread position: | 142-597 |
| Cow position: | chr2:70709685-70709221 (view UCSC Genome Browser custom track) |
| Alignm length: | 473 |
| Alignm identity: | 330 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 220, 36 |
| Conread position: | 155-597 |
| Cow position: | chr2:22134545-22134983 (view UCSC Genome Browser custom track) |
| Alignm length: | 452 |
| Alignm identity: | 300 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 257, 103 |
| Conread position: | 158-597 |
| Cow position: | chr2:20918036-20918435 (view UCSC Genome Browser custom track) |
| Alignm length: | 442 |
| Alignm identity: | 303 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 204, 50 |
| Conread position: | 221-597 |
| Cow position: | chr2:47525134-47525505 (view UCSC Genome Browser custom track) |
| Alignm length: | 385 |
| Alignm identity: | 249 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 304, 17 |
| Conread position: | 334-597 |
| Cow position: | chr2:4923605-4923876 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 192 |
| Alignm E-value: | 8e-34 |
| Alignm gaps (pig, cow): | 28, 121 |
| Conread position: | 138-606 |
| Cow position: | chr20:870339-870815 (view UCSC Genome Browser custom track) |
| Alignm length: | 487 |
| Alignm identity: | 334 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 67, 31 |
| Conread position: | 314-610 |
| Cow position: | chr20:19342307-19341995 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 223 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 45, 6 |
| Conread position: | 139-610 |
| Cow position: | chr21:22943396-22942912 (view UCSC Genome Browser custom track) |
| Alignm length: | 489 |
| Alignm identity: | 361 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 155 |
| Conread position: | 361-596 |
| Cow position: | chr21:35403335-35403580 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 185 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 160, 13 |
| Conread position: | 376-607 |
| Cow position: | chr21:10852762-10852520 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 172 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 149, 0 |
| Conread position: | 139-596 |
| Cow position: | chr22:36356677-36356212 (view UCSC Genome Browser custom track) |
| Alignm length: | 472 |
| Alignm identity: | 345 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 6, 156 |
| Conread position: | 142-596 |
| Cow position: | chr22:26105541-26106012 (view UCSC Genome Browser custom track) |
| Alignm length: | 476 |
| Alignm identity: | 325 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 147, 184 |
| Conread position: | 151-597 |
| Cow position: | chr22:40373001-40372544 (view UCSC Genome Browser custom track) |
| Alignm length: | 472 |
| Alignm identity: | 328 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 42 |
| Conread position: | 153-602 |
| Cow position: | chr22:21956367-21955941 (view UCSC Genome Browser custom track) |
| Alignm length: | 454 |
| Alignm identity: | 309 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 115, 52 |
| Conread position: | 338-597 |
| Cow position: | chr23:41568577-41568318 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 187 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 25, 40 |
| Conread position: | 138-588 |
| Cow position: | chr24:12148409-12148864 (view UCSC Genome Browser custom track) |
| Alignm length: | 463 |
| Alignm identity: | 323 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 177, 155 |
| Conread position: | 143-597 |
| Cow position: | chr24:39680203-39679766 (view UCSC Genome Browser custom track) |
| Alignm length: | 464 |
| Alignm identity: | 324 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 219, 64 |
| Conread position: | 138-606 |
| Cow position: | chr25:11043010-11042531 (view UCSC Genome Browser custom track) |
| Alignm length: | 485 |
| Alignm identity: | 335 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 82, 156 |
| Conread position: | 139-597 |
| Cow position: | chr25:34494759-34495216 (view UCSC Genome Browser custom track) |
| Alignm length: | 477 |
| Alignm identity: | 326 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 119, 155 |
| Conread position: | 143-597 |
| Cow position: | chr25:14537278-14537738 (view UCSC Genome Browser custom track) |
| Alignm length: | 464 |
| Alignm identity: | 323 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 219, 165 |
| Conread position: | 321-597 |
| Cow position: | chr25:9394421-9394128 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 214 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 142-606 |
| Cow position: | chr26:32051123-32051573 (view UCSC Genome Browser custom track) |
| Alignm length: | 474 |
| Alignm identity: | 326 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 133, 63 |
| Conread position: | 233-597 |
| Cow position: | chr26:3703586-3703213 (view UCSC Genome Browser custom track) |
| Alignm length: | 383 |
| Alignm identity: | 266 |
| Alignm E-value: | 8.00001e-42 |
| Alignm gaps (pig, cow): | 82, 58 |
| Conread position: | 398-614 |
| Cow position: | chr26:35402372-35402585 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 154 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 98, 81 |
| Conread position: | 335-601 |
| Cow position: | chr27:5995068-5995348 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 198 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 32, 47 |
| Conread position: | 142-597 |
| Cow position: | chr29:13057363-13056892 (view UCSC Genome Browser custom track) |
| Alignm length: | 474 |
| Alignm identity: | 336 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 170, 111 |
| Conread position: | 144-606 |
| Cow position: | chr29:32893349-32892904 (view UCSC Genome Browser custom track) |
| Alignm length: | 473 |
| Alignm identity: | 333 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 363, 49 |
| Conread position: | 158-592 |
| Cow position: | chr29:253512-253068 (view UCSC Genome Browser custom track) |
| Alignm length: | 451 |
| Alignm identity: | 328 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 145, 81 |
| Conread position: | 139-597 |
| Cow position: | chr3:73304033-73303579 (view UCSC Genome Browser custom track) |
| Alignm length: | 462 |
| Alignm identity: | 367 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 169, 63 |
| Conread position: | 142-597 |
| Cow position: | chr3:3059419-3058964 (view UCSC Genome Browser custom track) |
| Alignm length: | 468 |
| Alignm identity: | 329 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 158 |
| Conread position: | 150-597 |
| Cow position: | chr3:53413593-53413159 (view UCSC Genome Browser custom track) |
| Alignm length: | 455 |
| Alignm identity: | 317 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 212, 38 |
| Conread position: | 212-605 |
| Cow position: | chr3:29641866-29641476 (view UCSC Genome Browser custom track) |
| Alignm length: | 404 |
| Alignm identity: | 272 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 150, 10 |
| Conread position: | 243-598 |
| Cow position: | chr3:67746887-67747241 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 248 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 288, 52 |
| Conread position: | 300-598 |
| Cow position: | chr3:21103093-21103397 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 214 |
| Alignm E-value: | 7.00649e-43 |
| Alignm gaps (pig, cow): | 68, 12 |
| Conread position: | 142-604 |
| Cow position: | chr4:11108741-11109208 (view UCSC Genome Browser custom track) |
| Alignm length: | 480 |
| Alignm identity: | 340 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 220, 27 |
| Conread position: | 142-593 |
| Cow position: | chr6:6162707-6162240 (view UCSC Genome Browser custom track) |
| Alignm length: | 479 |
| Alignm identity: | 327 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 52, 174 |
| Conread position: | 160-597 |
| Cow position: | chr6:29281849-29281422 (view UCSC Genome Browser custom track) |
| Alignm length: | 442 |
| Alignm identity: | 297 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 203, 30 |
| Conread position: | 163-597 |
| Cow position: | chr6:14840402-14839976 (view UCSC Genome Browser custom track) |
| Alignm length: | 452 |
| Alignm identity: | 310 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 203, 30 |
| Conread position: | 138-596 |
| Cow position: | chr7:58642891-58643352 (view UCSC Genome Browser custom track) |
| Alignm length: | 474 |
| Alignm identity: | 341 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 224, 44 |
| Conread position: | 138-604 |
| Cow position: | chr7:18935009-18935480 (view UCSC Genome Browser custom track) |
| Alignm length: | 482 |
| Alignm identity: | 327 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 225, 178 |
| Conread position: | 141-597 |
| Cow position: | chr7:21241085-21241541 (view UCSC Genome Browser custom track) |
| Alignm length: | 474 |
| Alignm identity: | 325 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 218, 9 |
| Conread position: | 142-604 |
| Cow position: | chr7:51839861-51839401 (view UCSC Genome Browser custom track) |
| Alignm length: | 471 |
| Alignm identity: | 346 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 16 |
| Conread position: | 177-593 |
| Cow position: | chr7:18425430-18425834 (view UCSC Genome Browser custom track) |
| Alignm length: | 435 |
| Alignm identity: | 296 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 41, 124 |
| Conread position: | 177-597 |
| Cow position: | chr7:29363842-29364266 (view UCSC Genome Browser custom track) |
| Alignm length: | 442 |
| Alignm identity: | 301 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 185, 75 |
| Conread position: | 319-597 |
| Cow position: | chr7:20785461-20785179 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 200 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 212, 54 |
| Conread position: | 157-597 |
| Cow position: | chr8:11777487-11777039 (view UCSC Genome Browser custom track) |
| Alignm length: | 460 |
| Alignm identity: | 308 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 11, 43 |
| Conread position: | 254-610 |
| Cow position: | chr8:41642949-41643315 (view UCSC Genome Browser custom track) |
| Alignm length: | 372 |
| Alignm identity: | 253 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 294, 39 |
| Conread position: | 139-591 |
| Cow position: | chr9:12726960-12726505 (view UCSC Genome Browser custom track) |
| Alignm length: | 465 |
| Alignm identity: | 341 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 5, 85 |
| Conread position: | 139-592 |
| Cow position: | chr9:52036283-52035844 (view UCSC Genome Browser custom track) |
| Alignm length: | 459 |
| Alignm identity: | 299 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 12, 65 |
| Conread position: | 142-596 |
| Cow position: | chr9:35681907-35681441 (view UCSC Genome Browser custom track) |
| Alignm length: | 471 |
| Alignm identity: | 339 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 218, 53 |
| Conread position: | 142-596 |
| Cow position: | chr9:35708073-35707607 (view UCSC Genome Browser custom track) |
| Alignm length: | 473 |
| Alignm identity: | 337 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 165, 53 |
| Conread position: | 368-590 |
| Cow position: | chr9:47516593-47516370 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 166 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 38, 195 |
| Conread position: | 138-612 |
| Cow position: | chrX:21267658-21268142 (view UCSC Genome Browser custom track) |
| Alignm length: | 492 |
| Alignm identity: | 348 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 189, 30 |
| Conread position: | 143-597 |
| Cow position: | chrX:15978546-15979006 (view UCSC Genome Browser custom track) |
| Alignm length: | 463 |
| Alignm identity: | 319 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 219, 150 |
| Conread position: | 337-600 |
| Cow position: | chrX:10413930-10414201 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 191 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 24, 98 |