Cow genome map
| Conread name: | LyN1-MLN01C080001 |
| Conread position: | 1-246 |
| Cow position: | chr10:6261767-6261525 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 184 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 19, 136 |
| Conread position: | 1-345 |
| Cow position: | chr10:21075878-21076219 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 252 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 63 |
| Conread position: | 1-345 |
| Cow position: | chr10:39881770-39881415 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 274 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 216 |
| Conread position: | 6-345 |
| Cow position: | chr10:53363506-53363842 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 248 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 14, 35 |
| Conread position: | 210-345 |
| Cow position: | chr10:64303253-64303116 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 107 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 92, 72 |
| Conread position: | 1-193 |
| Cow position: | chr11:13068691-13068503 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 147 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 19, 73 |
| Conread position: | 1-193 |
| Cow position: | chr11:13161306-13161494 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 146 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 19, 73 |
| Conread position: | 1-201 |
| Cow position: | chr11:44230253-44230458 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 147 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 19, 193 |
| Conread position: | 1-207 |
| Cow position: | chr11:9416494-9416295 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 155 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 20, 140 |
| Conread position: | 1-293 |
| Cow position: | chr11:10218414-10218108 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 227 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 1-333 |
| Cow position: | chr11:38006178-38005838 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 234 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 19, 272 |
| Conread position: | 1-337 |
| Cow position: | chr11:30186244-30186584 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 262 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 254 |
| Conread position: | 1-344 |
| Cow position: | chr11:36761236-36761585 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 251 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 16, 88 |
| Conread position: | 2-342 |
| Cow position: | chr12:17974980-17975330 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 255 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 88 |
| Conread position: | 1-231 |
| Cow position: | chr13:21130499-21130742 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 188 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 1-283 |
| Cow position: | chr13:34047854-34048148 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 207 |
| Alignm E-value: | 8e-38 |
| Alignm gaps (pig, cow): | 19, 248 |
| Conread position: | 1-287 |
| Cow position: | chr13:22186510-22186208 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 225 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 1-345 |
| Cow position: | chr13:30261465-30261814 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 249 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 19, 13 |
| Conread position: | 1-301 |
| Cow position: | chr14:39723081-39722769 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 235 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 236 |
| Conread position: | 7-183 |
| Cow position: | chr14:30707591-30707415 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 133 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 13, 98 |
| Conread position: | 1-263 |
| Cow position: | chr15:32286370-32286636 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 188 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 19, 118 |
| Conread position: | 190-345 |
| Cow position: | chr15:14577213-14577057 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 119 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 114, 53 |
| Conread position: | 1-191 |
| Cow position: | chr16:25293104-25293288 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 142 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 20, 105 |
| Conread position: | 1-345 |
| Cow position: | chr16:28439034-28438692 (view UCSC Genome Browser custom track) |
| Alignm length: | 360 |
| Alignm identity: | 241 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 19, 242 |
| Conread position: | 1-349 |
| Cow position: | chr16:14669032-14669389 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 268 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 82 |
| Conread position: | 1-349 |
| Cow position: | chr16:24155677-24155338 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 249 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 19, 62 |
| Conread position: | 44-174 |
| Cow position: | chr16:23872773-23872642 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 104 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 98, 60 |
| Conread position: | 121-345 |
| Cow position: | chr16:55080494-55080263 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 172 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 55, 146 |
| Conread position: | 44-312 |
| Cow position: | chr17:13894157-13893901 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 163 |
| Alignm E-value: | 9e-32 |
| Alignm gaps (pig, cow): | 258, 144 |
| Conread position: | 1-347 |
| Cow position: | chr18:9187240-9186887 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 267 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 127 |
| Conread position: | 35-274 |
| Cow position: | chr18:46878411-46878165 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 176 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 152, 46 |
| Conread position: | 1-345 |
| Cow position: | chr19:20111702-20111342 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 272 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 78 |
| Conread position: | 1-311 |
| Cow position: | chr20:18328799-18328476 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 248 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 137 |
| Conread position: | 1-185 |
| Cow position: | chr21:34002688-34002503 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 127 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 1-334 |
| Cow position: | chr21:993424-993079 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 257 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 282 |
| Conread position: | 36-345 |
| Cow position: | chr21:26094459-26094770 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 213 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 151, 68 |
| Conread position: | 59-343 |
| Cow position: | chr21:3193930-3194211 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 205 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 128, 62 |
| Conread position: | 1-284 |
| Cow position: | chr22:8873309-8873606 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 227 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 155 |
| Conread position: | 1-296 |
| Cow position: | chr22:13737984-13737707 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 207 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 19, 37 |
| Conread position: | 1-312 |
| Cow position: | chr22:36581656-36581347 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 237 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 19, 7 |
| Conread position: | 1-342 |
| Cow position: | chr22:10964625-10964967 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 256 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 70 |
| Conread position: | 1-345 |
| Cow position: | chr22:35943962-35943611 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 261 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 178, 20 |
| Conread position: | 4-345 |
| Cow position: | chr22:293717-293380 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 248 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 182, 20 |
| Conread position: | 35-345 |
| Cow position: | chr22:41237029-41237355 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 220 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 37, 80 |
| Conread position: | 75-290 |
| Cow position: | chr22:8150906-8150694 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 153 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 63, 76 |
| Conread position: | 1-210 |
| Cow position: | chr23:1322403-1322188 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 155 |
| Alignm E-value: | 9e-32 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 1-345 |
| Cow position: | chr24:14873826-14873474 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 272 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 152 |
| Conread position: | 1-346 |
| Cow position: | chr24:6047768-6048125 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 271 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 274 |
| Conread position: | 35-247 |
| Cow position: | chr25:3379206-3378982 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 172 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 125, 0 |
| Conread position: | 1-169 |
| Cow position: | chr27:24560641-24560808 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 131 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 88, 20 |
| Conread position: | 98-263 |
| Cow position: | chr27:6012945-6013114 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 125 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 89, 31 |
| Conread position: | 1-312 |
| Cow position: | chr28:8783572-8783891 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 245 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 17 |
| Conread position: | 1-339 |
| Cow position: | chr28:10591886-10591549 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 262 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 122 |
| Conread position: | 2-345 |
| Cow position: | chr28:29437663-29437314 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 245 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 18, 34 |
| Conread position: | 1-281 |
| Cow position: | chr29:16017688-16017395 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 220 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 1-204 |
| Cow position: | chr7:42299370-42299167 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 156 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 19, 192 |
| Conread position: | 1-344 |
| Cow position: | chr7:30120048-30119698 (view UCSC Genome Browser custom track) |
| Alignm length: | 360 |
| Alignm identity: | 278 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 125 |
| Conread position: | 2-340 |
| Cow position: | chr7:30299629-30299986 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 274 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 150 |
| Conread position: | 9-345 |
| Cow position: | chr7:41876980-41876640 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 253 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 58, 16 |
| Conread position: | 18-309 |
| Cow position: | chr7:63953238-63952922 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 222 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 9, 268 |
| Conread position: | 35-272 |
| Cow position: | chr7:65497258-65497013 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 174 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 152, 107 |
| Conread position: | 217-346 |
| Cow position: | chr7:41487304-41487433 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 108 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 85, 18 |
| Conread position: | 1-342 |
| Cow position: | chr8:38579620-38579267 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 264 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 150 |
| Conread position: | 2-346 |
| Cow position: | chr8:39159992-39160349 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 265 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 275 |
| Conread position: | 3-345 |
| Cow position: | chr8:24877011-24876675 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 252 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 118 |
| Conread position: | 1-314 |
| Cow position: | chr9:29327371-29327683 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 235 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 19, 60 |
| Conread position: | 1-345 |
| Cow position: | chr9:3725588-3725959 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 252 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 23, 15 |
| Conread position: | 1-345 |
| Cow position: | chr9:54994628-54994962 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 238 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 27, 188 |
| Conread position: | 1-345 |
| Cow position: | chr9:59509932-59510285 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 268 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 182, 20 |
| Conread position: | 1-193 |
| Cow position: | chrX:6251396-6251208 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 141 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 19, 124 |
| Conread position: | 1-199 |
| Cow position: | chrX:41890134-41889938 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 148 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 19, 32 |
| Conread position: | 4-148 |
| Cow position: | chrX:28876315-28876170 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 107 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 44-298 |
| Cow position: | chrX:29812991-29813254 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 195 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 142, 236 |
| Conread position: | 54-345 |
| Cow position: | chrX:27409190-27409478 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 213 |
| Alignm E-value: | 8e-40 |
| Alignm gaps (pig, cow): | 155, 133 |