Cow genome map
| Conread name: | LyN1-MLN01D060020 |
| Conread position: | 110-275 |
| Cow position: | chr10:1367340-1367509 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 127 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 59, 138 |
| Conread position: | 171-433 |
| Cow position: | chr11:81552289-81552003 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 203 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 29, 76 |
| Conread position: | 461-571 |
| Cow position: | chr11:81551944-81551834 (view UCSC Genome Browser custom track) |
| Alignm length: | 111 |
| Alignm identity: | 88 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 112-327 |
| Cow position: | chr14:16846269-16846501 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 167 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 45, 136 |
| Conread position: | 116-396 |
| Cow position: | chr14:34925407-34925713 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 214 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 462-611 |
| Cow position: | chr14:12318209-12318361 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 114 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 129, 47 |
| Conread position: | 2-433 |
| Cow position: | chr15:21950846-21950373 (view UCSC Genome Browser custom track) |
| Alignm length: | 474 |
| Alignm identity: | 309 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 74, 0 |
| Conread position: | 107-724 |
| Cow position: | chr15:2802759-2802116 (view UCSC Genome Browser custom track) |
| Alignm length: | 661 |
| Alignm identity: | 429 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 64, 144 |
| Conread position: | 461-749 |
| Cow position: | chr17:3708743-3708474 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 197 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 123, 37 |
| Conread position: | 462-736 |
| Cow position: | chr17:31104142-31103885 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 197 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 186, 105 |
| Conread position: | 111-327 |
| Cow position: | chr18:36210846-36210615 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 172 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 59, 128 |
| Conread position: | 457-734 |
| Cow position: | chr18:51238535-51238794 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 204 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 11, 74 |
| Conread position: | 502-736 |
| Cow position: | chr18:29765254-29765475 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 163 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 12-432 |
| Cow position: | chr19:10957542-10957075 (view UCSC Genome Browser custom track) |
| Alignm length: | 475 |
| Alignm identity: | 321 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 59, 49 |
| Conread position: | 461-603 |
| Cow position: | chr19:18522664-18522811 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 113 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 1-405 |
| Cow position: | chr2:6189217-6189648 (view UCSC Genome Browser custom track) |
| Alignm length: | 438 |
| Alignm identity: | 288 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 69, 98 |
| Conread position: | 172-459 |
| Cow position: | chr2:66309072-66308774 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 211 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 127, 23 |
| Conread position: | 461-602 |
| Cow position: | chr2:14778421-14778279 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 105 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 122, 0 |
| Conread position: | 461-734 |
| Cow position: | chr2:1830094-1829845 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 203 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 116, 0 |
| Conread position: | 453-734 |
| Cow position: | chr21:25975585-25975852 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 188 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 73, 5 |
| Conread position: | 461-602 |
| Cow position: | chr21:22895632-22895775 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 114 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 108, 0 |
| Conread position: | 99-346 |
| Cow position: | chr22:97749-97488 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 185 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 73, 7 |
| Conread position: | 110-536 |
| Cow position: | chr23:29404678-29404219 (view UCSC Genome Browser custom track) |
| Alignm length: | 465 |
| Alignm identity: | 312 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 90, 61 |
| Conread position: | 315-587 |
| Cow position: | chr23:27169148-27169415 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 178 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 37, 26 |
| Conread position: | 461-737 |
| Cow position: | chr24:14872741-14872469 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 181 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 97, 122 |
| Conread position: | 472-737 |
| Cow position: | chr24:583496-583233 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 185 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 103, 10 |
| Conread position: | 466-619 |
| Cow position: | chr25:11833106-11832951 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 119 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 18, 126 |
| Conread position: | 110-393 |
| Cow position: | chr3:28929536-28929244 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 207 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 60, 74 |
| Conread position: | 461-588 |
| Cow position: | chr3:21017158-21017029 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 106 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 54, 29 |
| Conread position: | 461-730 |
| Cow position: | chr3:83233157-83232905 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 192 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 77, 131 |
| Conread position: | 462-734 |
| Cow position: | chr3:19722094-19721836 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 185 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 180, 90 |
| Conread position: | 110-276 |
| Cow position: | chr4:47518217-47518388 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 127 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 62, 139 |
| Conread position: | 116-736 |
| Cow position: | chr4:61109191-61108552 (view UCSC Genome Browser custom track) |
| Alignm length: | 655 |
| Alignm identity: | 419 |
| Alignm E-value: | 6.00036e-42 |
| Alignm gaps (pig, cow): | 55, 20 |
| Conread position: | 83-404 |
| Cow position: | chr5:14659122-14658769 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 250 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 85, 16 |
| Conread position: | 110-736 |
| Cow position: | chr5:47073907-47074536 (view UCSC Genome Browser custom track) |
| Alignm length: | 652 |
| Alignm identity: | 405 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 82, 61 |
| Conread position: | 460-733 |
| Cow position: | chr5:49074240-49073977 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 184 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 66, 135 |
| Conread position: | 468-645 |
| Cow position: | chr6:27331656-27331828 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 125 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 118, 0 |
| Conread position: | 461-672 |
| Cow position: | chr7:18710303-18710507 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 152 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 119, 70 |
| Conread position: | 461-736 |
| Cow position: | chr8:16760783-16760519 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 202 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 123, 44 |
| Conread position: | 461-736 |
| Cow position: | chr8:47361672-47361417 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 200 |
| Alignm E-value: | 9e-37 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 461-738 |
| Cow position: | chr8:47081248-47081508 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 201 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 461-739 |
| Cow position: | chr8:45216190-45216455 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 204 |
| Alignm E-value: | 8e-36 |
| Alignm gaps (pig, cow): | 46, 27 |
| Conread position: | 113-394 |
| Cow position: | chrX:40775241-40774952 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 204 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 55, 40 |
| Conread position: | 146-433 |
| Cow position: | chrX:33213843-33214162 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 229 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 25, 101 |
| Conread position: | 461-579 |
| Cow position: | chrX:24101403-24101285 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 92 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 461-734 |
| Cow position: | chrX:33214224-33214485 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 202 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 77, 116 |
| Conread position: | 461-737 |
| Cow position: | chrX:23070663-23070924 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 189 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 70, 0 |